ID:

dmo_1664

 Coordinate:

scaffold_6500:27445677-27445827 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-43.1 -43.1 -43.0

Flybase annnotation

CDS [Dmoj\GI20694-cds]; exon [dmoj_GLEANR_553:2]; intron [Dmoj\GI20694-in]

Repeatable elements

NameClassFamilyStrand
P_DGDNAP+
Homo6DNAhAT-Pegasus+
DNAREP1_DMRCHelitron+
mature
  1. scaffold_1770:1824-1846 +
  2. scaffold_1777:2532-2554 +
  3. scaffold_1780:9902-9924 +
  4. scaffold_4623:2693-2715 +
  5. scaffold_6413:41855-41877 +
  6. scaffold_6473:14758377-14758399 +
  7. scaffold_6479:35419-35441 +
  8. scaffold_6482:1249318-1249340 +
  9. scaffold_6482:1969692-1969714 +
  10. scaffold_6482:2181075-2181097 +
  11. scaffold_6496:26408506-26408528 +
  12. scaffold_6498:572949-572971 +
  13. scaffold_6498:1065960-1065982 +
  14. scaffold_6498:1350044-1350066 +
  15. scaffold_6498:1934817-1934839 +
  16. scaffold_6500:14959707-14959729 +
  17. scaffold_6500:29365126-29365148 +
  18. scaffold_6500:29495983-29496005 +
  19. dmo_1718  scaffold_6500:30514190-30514212 +
  20. scaffold_6523:823-845 +
  21. scaffold_2603:890-912 -
  22. scaffold_5042:1492-1514 -
  23. scaffold_6383:1081-1103 -
  24. scaffold_6473:1670502-1670524 -
  25. scaffold_6473:3181330-3181352 -
  26. scaffold_6473:16672384-16672406 -
  27. scaffold_6480:40706-40728 -
  28. scaffold_6496:19428039-19428061 -
  29. scaffold_6500:1360302-1360324 -
  30. scaffold_6500:4015571-4015593 -
  31. scaffold_6500:4616688-4616710 -
  32. scaffold_6500:6622636-6622658 -
  33. scaffold_6500:6623454-6623476 -
  34. scaffold_6500:18376090-18376112 -
  35. scaffold_6500:22123816-22123838 -
  36. dmo_1664  scaffold_6500:27445789-27445811 -
  37. scaffold_6540:2254988-2255010 -
  38. scaffold_6540:19558125-19558147 -
  39. scaffold_6540:19862396-19862418 -
  40. scaffold_6680:9542083-9542105 -
  41. scaffold_6310:2520-2542 +
  42. scaffold_6359:2534879-2534901 +
  43. scaffold_6473:7592596-7592618 +
  44. scaffold_6473:10060951-10060973 +
  45. scaffold_6473:13913328-13913350 +
  46. scaffold_6473:14257154-14257176 +
  47. scaffold_6474:33837-33859 +
  48. scaffold_6496:12404732-12404754 +
  49. scaffold_6496:25686906-25686928 +
  50. scaffold_6498:1745938-1745960 +
  51. scaffold_6500:5560627-5560649 +
  52. scaffold_6500:29922956-29922978 +
  53. scaffold_6500:31364017-31364039 +
  54. scaffold_6540:240581-240603 +
  55. scaffold_6540:956503-956525 +
  56. scaffold_6541:1002112-1002134 +
  57. scaffold_6541:1009150-1009172 +
  58. scaffold_6680:17739222-17739244 +
  59. scaffold_6680:21448540-21448562 +
  60. scaffold_6680:23219400-23219422 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTGTTACATACTTTTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAATAAACCTGAATTCCTTTGGCTTTGGTTGCTGAGGCGATATACTTTTGGAGATAAATCCGTATCGTTGGAAATATTAAGTGATCAATCGCTTTCTTTTCACAGTGCACTCAATCATTCGGTAAACTACGAAGATCCCTATTTGAAAATTTCCA
**************************************************.......((((((((((((...((((((...)))))).))))))))))))............(((((((.......)))))))((((((......(((......)))))))))(((((((....((((((....))))))...)))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V041
embryo
 M046
female body
 M060
embryo
..................................................................TGATTTCCCATTTTCAATGGGTT.................................................................................................................................................................. 23 0 20 0.25 5 5 0 0
.......................................................................................................................TTTGGGTTCTGAGGGGATAT................................................................................................................ 20 3 7 0.14 1 0 1 0
.................................................................CTGATTTCCCATTTTCAATGGGTT.................................................................................................................................................................. 24 0 20 0.05 1 0 1 0
.............TCTGCGATGATTCCTTCTGCCTGT...................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1
.................CGATGATTCCTTCTGCCTGTT..................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0

Anti-sense strand reads

TATGAAATACCCCAGACGCTACTAAGGAAGACGGACAATGTATGAAAAGTGTTTTGGTAATATGGGACTAAAGGGTAAAAGTTACCCAAGTCCCATATTATTTGGACTTAAGGAAACCGAAACCAACGACTCCGCTATATGAAAACCTCTATTTAGGCATAGCAACCTTTATAATTCACTAGTTAGCGAAAGAAAAGTGTCACGTGAGTTAGTAAGCCATTTGATGCTTCTAGGGATAAACTTTTAAAGGT
**************************************************.......((((((((((((...((((((...)))))).))))))))))))............(((((((.......)))))))((((((......(((......)))))))))(((((((....((((((....))))))...)))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V049
head
....................................................................................................................................................................................................................................TCTAGGCAACAACTTTTAAA... 20 3 20 0.70 14 13 1 0 0
.................GCTACTAAGGAAGACGGACAATG................................................................................................................................................................................................................... 23 0 20 0.10 2 0 0 2 0
................................................GTGTTTTGGTAATATGGGACT...................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
..........................................TGAAAAGTGTTTTGGTAATA............................................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 1
.......................................GTATGAAAAGTGTTTTGGTAATATG........................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
...........CCAGACGCTACTAAGGAAGAC........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
..............GACGCTACTAAGGAAGACGG......................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:27445627-27445877 - dmo_1664 ATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTGTTACAT--ACTT-------TTC-ACAAAACCAT-TATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTAT-------AAT---------------------------------AAACCT--------------G-----A----ATTCC-----------------------------TTTGGCTTTGGTTGCTGAGGCG--------------------------------------------------------------------ATATACTTTTGGAGATAA--------------------------------------------------------------------------------------------------------------------------------ATCCGTA--------------------------------TCGTTGGAAATATTAAGTGATC----------------------------------------------------------------------AAT-----------------------------------------------------------------C---------------GCTTTCTTTTCACAGTGCAC--------------------------TCAATCATTCGGTAA------------------ACTACG------------------------AAGATCCCTATTTGAAAAT-TT-CCA
droVir3 scaffold_12875:3999351-3999594 + ATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTGTTACAT--ACATTTCGATTTTGCACAAATACAA-TATACCATTAT-ATCAATTTTTAATGGGCTCAGGGTAT-------ACA---------------------------------AATAACT-----------------TAAGG--TA--TC-------------------------------CGCTCTACTGGCTGAGCCG-----------------------------------------------------------TCAGAATTGGTCTG--------------------------------------------------------------------------------------------------------------------------------------------------TATTTGGTCACATTAGACAATTATCGATTGCCCAACTTAGGGTATAC------------TAA---------TTGT-------------------------------CGGTCTACTTGAGAATGTT--------------------------------------------------------------------------------------------------------------------------------TGTTTG--------------------------------------------------------------------------C-GAA-TT-CCA
droGri2 scaffold_15252:5431007-5431206 + ACATTTTATGACATCGGAAATACTTTCTTCTGCTTGTTCCAT--ACGT-------TAGCACAACTTTAT-TATACGCTTCTTACCCATTCTTAATGGGTCCAGGTGAT-------AAA---------------------------------AATATCG-------------A-----T----AAGCC-----------------------------GTTAATTTCGATAGTTGGACACATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCGGCATAAAAT--------------TA-----A--------------------------------ATCCTAGGACATAT------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA----------TAATTGA--------TAAA-----TAATTT----------------------------------TCA-GT-TTA
droWil2 scf2_1100000004546:15112-15325 - ATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACAT--ACAT-------TTTGGCGACTTTAA-TATACCATTTC-ACCC------TATGGGTGTATGGTAT-------AAT---------------------------------AACCAAT-----------------TGCTT----TCC------------------------------------------------------------------------------------GTGAACTGGGGAACAAAGCTT-----TCCACGTCAA---------------------------------------CATTTTTGTATGATGATGAATCGATTCTT-----------------------------------------------------------------------------------GTTTTATCAATCCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACA------------------------AAAGTTCCAATCTAAAAAT-T----T
dp5 3:1808599-1808778 - ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTATCCA--CTTT-------TACCACAAATCTAA-TATACCCCAAT-ACTCAT----TTTGAGTATCGGGTAT-------AAA---------------------------------AATCGTT-----------------CCTAT------TG----------------------------CTCAATTTTG--------------------------------------------------------------------------------ATATTCCGTTGA--------------------------------------------------------------------------------------------------------ATA---------------------------ATGCATG--------------------------------CAGTTT----TAAAACGTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA--------TAAA-----GACCTT----------------------------------TTC-TC-AGT
droPer2 scaffold_3:5051349-5051605 - ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACAC--ACATCCACTTTTACCACAAATCTAA-TATACCCCAGT-ACTCAT----TTTGAGTATCGGGTAT-------AAA---------------------------------AAAAAACCC-----------G-----CTAGGTG--TG-----------GGC------TTGCAGCCGA----------------AGAGATCGACGTTTTGTCGTATCCAAAGTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCGAAAATGACAGGT---CTGTCCA---------TCGC-------------------------------TCTTCTAT--------------------------------------------------------------------------------------------------------TTCAAAGA---------------------------------------------------------------ACAGCA--GAT-CTCTGGGGTATTTGTTCAAAGTTCAATGTTCAAA--------AA
droAna3 scaffold_13417:3372275-3372475 - ATTCTTTATGGGATCAGAGATGATACTCTCTCCCTTTTATATCAACTC-------AACAATTGATTGAA-TAAATTCTTTT-AA-------------------------------AAT---------------------------------AAAATAT-----------------TTTTT----------------------------------------------------------------------------------------CGTTTTAGCTGGACCAGGAAGTTTTTTAG--------------------------------------------------------------TTCG------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGATAATT-------------------------------------------------------------------------------------------------------CTCCAGGCG------------------------ATTACTC---------------GCTTTTTTTTCATA------------------------------------------------------TCAATAACCAAATT-CA------------------------AAGATTTCGTATTGA--------GAA
droBip1 scf7180000395950:8264-8501 + ATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAC--ACTT-------TTGGACAAAATTAT-AATACCCTC-------------TGCA-----AGGGTAT-------AAA---------------------------------AAGCTAA-----------------C------TTCGG---------------GCGGAG-----------------------------------------------------------------------------------------CCGAAGTTGATATACCCTTGCAGTTAAAAACGAAT--------------------------------------------------ATATGGAATATCGCAAAAATCGGATAAAGTT------------------------------------------------------------------------------------------------GGCC----AATCCTTATGA-------------------------------------------------GAAT----------------------------------------------------------------------------------------------ATCACAATAAAACCAATTCATTATAAAAAAATATCTATCTA--------------------------------------------------------------------------TAAAG-TC-CCA
droKik1 scf7180000302386:294217-294450 + ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AGTACCCT---------------GCA-----AGGGTAT-------AAT---------------------------------AATATCA-----------------T------TTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTAACCAACATTAAAAGTAAAAATTATATACTT---------TT--------CATAAATCCATTATTTATTTCGAAATATAGTTTAAATAGTAACTTATTTTACTTCCCTAGCAATTTATCGCTTATAAATATATCTATTATTTGAC------------------------------------------------------------------------------------------------------------------ACA-TT-TAA
droFic1 scf7180000454115:850158-850323 - ATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AATACCCTTTT-GCTC------TGCAA-----GGGTAT-------AAT---------------------------------AAAAAGC-------------A-----C------TAG---------------CTAAT------------------------------------------------------------------------------------------------------AATTTTTGCATATAA--------------------------------------------------------------------------------------------------------------------------------GTTTAAA--------------------------------GTGTTGAAAAAA----------------------------------------------------------------------------------------------------------AGAGTTTAAATA------------------------AGTAAAC---------------ACT-------------------------------------------------------------------------------------------------------------------------------T-TCT
droEle1 scf7180000491240:889450-889674 + ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AATACCCTC-------------TGCA-----AGGGTAT-------AAA---------------------------------AATGTATCTAAAATAATTTAGACTGGTTG------TTATCACATTTTAGCC------TTAAAACCGA----------------AAAA--------------------------------------------------------------------------------------------CTCAT------------------------------------------------------------------------------------------AAAG-----------------------GAATTCA------------------------ATAA--------AGAAATTGAAACAT---CAGTTAG---------TTCC----------------------------------------------------------A---------------------------------------------------------------------------------TTTAAC-----ACAT--------------TTAAATATTTAATA---------------------------------------G-----------------------------------TAAAATTGCGAA
droRho1 scf7180000780019:46400-46608 - ATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACAT--ACTT-------TTGCACGAATACAA-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------AAGCCCT-----------------TGTTT------TA---------------------------------------------------------------------------------------------------------------------------TTCTTACTGGCATGGTCGAATTGTGACAACATGAATTATTTATTATAATGTAAAATTA--------------------------------------------------------------------T------------------------------------------------------TATTTA---------------------TTATT---------------------------------------------------------------------------------------------------------------------------------------------------------AACAATACAT--------------------------TTAATA------------------------------------------------------------ATTC------TAGAAA-GA-TCC
droBia1 scf7180000299672:19581-19778 + ATACCTTATGCGATCGGAAACTCTTCCTTTTACCTGTTACAT--ACTT-------TCCGACGAACCTAC-TATACTTTTAT-TCTC------TACAAGTGACGGCTAT-------AAC---------------------------------AAATTAT-----------------TGCT------GC-----------------------------GTTGTTTTTGACAGATTACCTT-----------------------------------------------------------------------------------------ATAC------------------------------------------------------------------------------------------TATTAGGCATACAATTT-----------------------------------------------TT--------TGTA--------------------ATTTTAAGA-------------------------------------------------ATTTTTAATAACATTTTATACA--------------------------------------------------------------------------------AAACGGA---------------------------------------------------------------------------------------------------------------C-TTA
droTak1 scf7180000413225:8956-9182 - ATACTTTATGGGGTCGGAAACGCTTCCTTCAAGCTGTTACAT--ACTT-------TTGCACGAATACAA-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------ACATGCA-------------------T------TAG---------------GTGGT------------------------------------------------------------------------------------------CCG------------------------------------------------TTATTGCATACTTATGTATGTATCCTTGTCCATTTTATGG----------------------GTTGGCTACACACTTTGACTTAGAAT--------------TG-----C--------------------------------AAC--------------------------------------------------------------------------------------------------CATTAGATAATC--------------------------------------------------------------------------CGCT------------------------------------------------------TTAATATCCAAATA-----G----------------------------------TAAAAT-TT-TGA
droEug1 scf7180000407725:11927-12136 - ATTCTTTATAGGGTCGGAAACGCTTCCTTCTACCTGTTACAT--ACTT-------TTCAACGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------AATTTCT-----------------AGTTT------TCTTCATCTTTTCTAC------CC---------------------TGAA----------------------------------------------------------------------------------------TTGTAGACTTGT------------------------------------------------------------------------------------------AGAT-----------------------ATCTTAA------------------------ATCC--------TGCAAATGAAAAGTCAT---T-------------------------------------------------------------------AATTTCAATTTATTCC--------------------------------------------------------------------------------AAGTCCAT--------------------------TTTTA--------------------------------------------------------------------------AAT-TC-GGT
dm3 chrU:2296150-2296331 - ATGCTTTATATAGTCGGGAACACTTCCTTCTGTCTGTTACAT--ACTT-------TTCAACGAATCTGGTTATACTAGATT-AGACACTT--TACAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------TGGT-----------------------------TTAAAGCCTA----------------AA---------------------------------------------AAATA-----------------------TTTTTTTGCAGTTAA--------------------------------------TACATTA--------------------------------------------------------------------T------------------------------------------------------TGTTTA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------T-TCT
droSim2 4:642824-642997 - ACACTTTGTGTAGTCGGAAAAGCTTCCTTCTGCCTGTTACAT--ACTT-------TTCAATGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGATAT-------AAT---------------------------------CATAATC-----------CAA------A---TTCCC-----------------------------TTTG-------------------------------------------------------------ATATA--ATTTT---------------------CTG-----------------------------------------------ACTCTATTTGA-----------------------------------------------GTA-------CA------------------ACCCATA--------------------------------AGTTTCGAACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGTTGTCAA
droSec2 scaffold_15:1536861-1537060 - ATACTTCATGTAGTCAGCAACGCTTCCATTTGCCTGTTACAT--ACTT-------TTCAACGAATCAAG-TATACCCTTTT-ACTC------TGCGAGTAACGGGTATAACCACAGAG-------------------------G-------AAGCTT--------------A-----G----TTTCC-----------------------------GTAA-------------------------------------------------------------AGCTA--GTTTTGTAA--------------------------------------------------------------GGTGCACCTG--------------------------------------------------------------------CTATTTGCAAAATAA-----A--------------------------------A-CG-------------------------------------------------------------------------------------------------------------CGGAATGCTCTTTGAGTG------------------------CCCATTT---------------GCTTTCTTTATA--------------------------------------------------------------------------------------------------------------------------C
droYak3 v2_chrUn_4830:796-1037 - ATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACAT--ACTT-------TTCAACGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGCTATAATTAGACTT------------------------------------AAACAT-----------T--------------------------------------------TTAAGTAT----------------TAATTTATCGTTATATGAAAAGTCATTTCTCTTAAAATTTGTTAATAAATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTTTTCTTTTTACATTTAAA--------------------------AAGACCATACATTAT------------------GCAATA--ATG-ACCTCACG------------------TATTAGAAAAA-TA-TCC
droEre2 scaffold_4784:25368784-25369029 - ATACTTTATTTGGTCGGAAAGGTTTCCTTCTGCCTGTTACAT--ACTT-------TTCAACGAATCTGG-TATACCCTTTT-ACTC------TACGAGTAATGGGTAGAATTATTAAAATTACATTCTTACATCTTTTGTGAGGGTGTGAGTG---------------------------------T---------------GCGCTG-----------------------------------------------------------------------------------------CTTAGGTTAATTTG--------------------------------------------------------------------------------------------------------------------------------------------------TA--------------------------------T-----------------------------------------------------AAGGATAAATCAAATGTTT---------TA--------AATTGAGTTTTGTTTTAAGTCGATGTTTT-GCTAAACT------------------------ATAACAT---------------TCT----------------------------------------------TT----------T--------------------------------------------------------ACTTTATAAT-TC-CTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTGTTACAT--ACTT-------TTC-ACAAAACCAT-TATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTAT-------AAT---------------------------------AAACCT--------------G-----A----ATTCC-----------------------------TTTGGCTTTGGTTGCTGAGGCG--------------------------------------------------------------------ATATACTTTTGGAGATAA--------------------------------------------------------------------------------------------------------------------------------ATCCGTA--------------------------------TCGTTGGAAATATTAAGTGATC----------------------------------------------------------------------AAT-----------------------------------------------------------------C---------------GCTTTCTTTTCACAGTGCAC--------------------------TCAATCATTCGGTAA------------------ACTACG------------------------AAGATCCCTATTTGAAAAT-TT-CCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................TGATTTCCCATTTTCAATGGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.255050000
............................................................................CTGATTTCCCATTTTCAATGGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.............TCTGCGATGATTCCTTCTGCCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
.................CGATGATTCCTTCTGCCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
ATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTGTTACAT--ACATTTCGATTTTGCACAAATACAA-TATACCATTAT-ATCAATTTTTAATGGGCTCAGGGTAT-------ACA---------------------------------AATAACT-----------------TAAGG--TA--TC-------------------------------CGCTCTACTGGCTGAGCCG-----------------------------------------------------------TCAGAATTGGTCTG--------------------------------------------------------------------------------------------------------------------------------------------------TATTTGGTCACATTAGACAATTATCGATTGCCCAACTTAGGGTATAC------------TAA---------TTGT-------------------------------CGGTCTACTTGAGAATGTT--------------------------------------------------------------------------------------------------------------------------------TGTTTG--------------------------------------------------------------------------C-GAA-TT-CCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................T--ACATTTCGATTTTGCACAAATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.292001000000000000000000000001000000000000000000000000000000000000
.......................................CAT--ACATTTCGATTTTGCACAAATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.171001000000000000000000000000000000000000000000000000000000000000
.......................................CAT--ACATTTCGATTTTGCACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171000000000000000000000000000000100000000000000000000000000000000
.........................................T--ACATTTCGATTTTGCACAAATACAA-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141000000000000000000000000000000000001000000000000000000000000000
.........................................T--ACATTTCGATTTTGCACAAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141000000000000000000000000000000000000010000000000000000000000000
.........................................T--ACATTTCGATTTTGCACAAATACAA-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.141000000000000000000000000001000000000000000000000000000000000000
.........................................T--ACATTTCGATTTTGCACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141000000000000000000000000100000000000000000000000000000000000000
........TGGGGTCGGAGATGCTTCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000020000000000000000000000000000
.............TCGGAGATGCTTCCTTCTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000001000000000000000010000000000000000000000000000000
..........................CTTCTGCCTGTTACAT--ACATTTCGATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.101000000000000000000000000001000000000000000000000000000000000000
..ACTTTATGGGGTCGGAGATGCTTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102000000000000000000000000000000000000000000000000000000000000002
............GTCGGAGATGCTTCCTTCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002000000000000000000000000000000000000000000000000000000000
.........GGGGTCGGAGATGCTTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
........TGGGGTCGGAGATGCTTCCTTCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
....TTTATGGGGTCGGAGATGCTTCCTTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
....TTTATGGGGTCGGAGATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000001000000000000000000000000000000000000000000000000000000
....TTTATGGGGTCGGAGATGCTTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.....TTATGGGGTCGGAGATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000000000000000100000
....TTTATGGGGTCGGAGATGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
ACATTTTATGACATCGGAAATACTTTCTTCTGCTTGTTCCAT--ACGT-------TAGCACAACTTTAT-TATACGCTTCTTACCCATTCTTAATGGGTCCAGGTGAT-------AAA---------------------------------AATATCG-------------A-----T----AAGCC-----------------------------GTTAATTTCGATAGTTGGACACATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCGGCATAAAAT--------------TA-----A--------------------------------ATCCTAGGACATAT------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA----------TAATTGA--------TAAA-----TAATTT----------------------------------TCA-GT-TTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACAT--ACAT-------TTTGGCGACTTTAA-TATACCATTTC-ACCC------TATGGGTGTATGGTAT-------AAT---------------------------------AACCAAT-----------------TGCTT----TCC------------------------------------------------------------------------------------GTGAACTGGGGAACAAAGCTT-----TCCACGTCAA---------------------------------------CATTTTTGTATGATGATGAATCGATTCTT-----------------------------------------------------------------------------------GTTTTATCAATCCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACA------------------------AAAGTTCCAATCTAAAAAT-T----TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTATCCA--CTTT-------TACCACAAATCTAA-TATACCCCAAT-ACTCAT----TTTGAGTATCGGGTAT-------AAA---------------------------------AATCGTT-----------------CCTAT------TG----------------------------CTCAATTTTG--------------------------------------------------------------------------------ATATTCCGTTGA--------------------------------------------------------------------------------------------------------ATA---------------------------ATGCATG--------------------------------CAGTTT----TAAAACGTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA--------TAAA-----GACCTT----------------------------------TTC-TC-AGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............TCGGAAACGATTCCTTCTGGACGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050310000100
...............................................T-------TACCACAAATCTAA-TATACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22202.004000400000000
..ACTTTATGGGGTCGGAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550000000050
.....................................................................................CAT----TTTGAGTATCGGGTAT-------AAA---------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040400000000
..............................................TT-------TACCACAAATCTAA-TATACCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530030000000
.............TCGGAAACGATTCCTTCTGGACGTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000100
...............................................T-------TACCACAAATCTAA-TATACCCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
.TACTTTATGGGGTCGGAAACGATTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.............................................................................................TTGAGTATCGGGTAT-------AAA---------------------------------AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droPer2
ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACAC--ACATCCACTTTTACCACAAATCTAA-TATACCCCAGT-ACTCAT----TTTGAGTATCGGGTAT-------AAA---------------------------------AAAAAACCC-----------G-----CTAGGTG--TG-----------GGC------TTGCAGCCGA----------------AGAGATCGACGTTTTGTCGTATCCAAAGTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTCGAAAATGACAGGT---CTGTCCA---------TCGC-------------------------------TCTTCTAT--------------------------------------------------------------------------------------------------------TTCAAAGA---------------------------------------------------------------ACAGCA--GAT-CTCTGGGGTATTTGTTCAAAGTTCAATGTTCAAA--------AASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................AAATCTAA-TATACCCCAGT-ACTCAT----TT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.182020000
..................................................................TAA-TATACCCCAGT-ACTCAT----TTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071010000
.................AAACGATTCCTTCTGGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droAna3
ATTCTTTATGGGATCAGAGATGATACTCTCTCCCTTTTATATCAACTC-------AACAATTGATTGAA-TAAATTCTTTT-AA-------------------------------AAT---------------------------------AAAATAT-----------------TTTTT----------------------------------------------------------------------------------------CGTTTTAGCTGGACCAGGAAGTTTTTTAG--------------------------------------------------------------TTCG------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGATAATT-------------------------------------------------------------------------------------------------------CTCCAGGCG------------------------ATTACTC---------------GCTTTTTTTTCATA------------------------------------------------------TCAATAACCAAATT-CA------------------------AAGATTTCGTATTGA--------GAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAC--ACTT-------TTGGACAAAATTAT-AATACCCTC-------------TGCA-----AGGGTAT-------AAA---------------------------------AAGCTAA-----------------C------TTCGG---------------GCGGAG-----------------------------------------------------------------------------------------CCGAAGTTGATATACCCTTGCAGTTAAAAACGAAT--------------------------------------------------ATATGGAATATCGCAAAAATCGGATAAAGTT------------------------------------------------------------------------------------------------GGCC----AATCCTTATGA-------------------------------------------------GAAT----------------------------------------------------------------------------------------------ATCACAATAAAACCAATTCATTATAAAAAAATATCTATCTA--------------------------------------------------------------------------TAAAG-TC-CCASizeHit CountTotal NormTotal
No Reads
droKik1
ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AGTACCCT---------------GCA-----AGGGTAT-------AAT---------------------------------AATATCA-----------------T------TTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTAACCAACATTAAAAGTAAAAATTATATACTT---------TT--------CATAAATCCATTATTTATTTCGAAATATAGTTTAAATAGTAACTTATTTTACTTCCCTAGCAATTTATCGCTTATAAATATATCTATTATTTGAC------------------------------------------------------------------------------------------------------------------ACA-TT-TAASizeHit CountTotal NormTotal
No Reads
droFic1
ATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AATACCCTTTT-GCTC------TGCAA-----GGGTAT-------AAT---------------------------------AAAAAGC-------------A-----C------TAG---------------CTAAT------------------------------------------------------------------------------------------------------AATTTTTGCATATAA--------------------------------------------------------------------------------------------------------------------------------GTTTAAA--------------------------------GTGTTGAAAAAA----------------------------------------------------------------------------------------------------------AGAGTTTAAATA------------------------AGTAAAC---------------ACT-------------------------------------------------------------------------------------------------------------------------------T-TCTSizeHit CountTotal NormTotal
No Reads
droEle1
ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAA--ACTT-------CTGACTGAAATTAT-AATACCCTC-------------TGCA-----AGGGTAT-------AAA---------------------------------AATGTATCTAAAATAATTTAGACTGGTTG------TTATCACATTTTAGCC------TTAAAACCGA----------------AAAA--------------------------------------------------------------------------------------------CTCAT------------------------------------------------------------------------------------------AAAG-----------------------GAATTCA------------------------ATAA--------AGAAATTGAAACAT---CAGTTAG---------TTCC----------------------------------------------------------A---------------------------------------------------------------------------------TTTAAC-----ACAT--------------TTAAATATTTAATA---------------------------------------G-----------------------------------TAAAATTGCGAASizeHit CountTotal NormTotal
No Reads
droRho1
ATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACAT--ACTT-------TTGCACGAATACAA-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------AAGCCCT-----------------TGTTT------TA---------------------------------------------------------------------------------------------------------------------------TTCTTACTGGCATGGTCGAATTGTGACAACATGAATTATTTATTATAATGTAAAATTA--------------------------------------------------------------------T------------------------------------------------------TATTTA---------------------TTATT---------------------------------------------------------------------------------------------------------------------------------------------------------AACAATACAT--------------------------TTAATA------------------------------------------------------------ATTC------TAGAAA-GA-TCCSizeHit CountTotal NormTotal
No Reads
droBia1
ATACCTTATGCGATCGGAAACTCTTCCTTTTACCTGTTACAT--ACTT-------TCCGACGAACCTAC-TATACTTTTAT-TCTC------TACAAGTGACGGCTAT-------AAC---------------------------------AAATTAT-----------------TGCT------GC-----------------------------GTTGTTTTTGACAGATTACCTT-----------------------------------------------------------------------------------------ATAC------------------------------------------------------------------------------------------TATTAGGCATACAATTT-----------------------------------------------TT--------TGTA--------------------ATTTTAAGA-------------------------------------------------ATTTTTAATAACATTTTATACA--------------------------------------------------------------------------------AAACGGA---------------------------------------------------------------------------------------------------------------C-TTASizeHit CountTotal NormTotal
No Reads
droTak1
ATACTTTATGGGGTCGGAAACGCTTCCTTCAAGCTGTTACAT--ACTT-------TTGCACGAATACAA-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------ACATGCA-------------------T------TAG---------------GTGGT------------------------------------------------------------------------------------------CCG------------------------------------------------TTATTGCATACTTATGTATGTATCCTTGTCCATTTTATGG----------------------GTTGGCTACACACTTTGACTTAGAAT--------------TG-----C--------------------------------AAC--------------------------------------------------------------------------------------------------CATTAGATAATC--------------------------------------------------------------------------CGCT------------------------------------------------------TTAATATCCAAATA-----G----------------------------------TAAAAT-TT-TGASizeHit CountTotal NormTotal
No Reads
droEug1
ATTCTTTATAGGGTCGGAAACGCTTCCTTCTACCTGTTACAT--ACTT-------TTCAACGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGGTAT-------AAA---------------------------------AATTTCT-----------------AGTTT------TCTTCATCTTTTCTAC------CC---------------------TGAA----------------------------------------------------------------------------------------TTGTAGACTTGT------------------------------------------------------------------------------------------AGAT-----------------------ATCTTAA------------------------ATCC--------TGCAAATGAAAAGTCAT---T-------------------------------------------------------------------AATTTCAATTTATTCC--------------------------------------------------------------------------------AAGTCCAT--------------------------TTTTA--------------------------------------------------------------------------AAT-TC-GGTSizeHit CountTotal NormTotal
No Reads
dm3
ATGCTTTATATAGTCGGGAACACTTCCTTCTGTCTGTTACAT--ACTT-------TTCAACGAATCTGGTTATACTAGATT-AGACACTT--TACAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------TGGT-----------------------------TTAAAGCCTA----------------AA---------------------------------------------AAATA-----------------------TTTTTTTGCAGTTAA--------------------------------------TACATTA--------------------------------------------------------------------T------------------------------------------------------TGTTTA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------T-TCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................TT-AGACACTT--TACAAGTAACGGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000403031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................T-------TTCAACGAATCTGGTTATACTAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTATATAGTCGGGAACACTTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041010000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------.....2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT-------TTCAACGAATCTGGTTATACTAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTATATAGTCGGGAACACTTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................T-------TTCAACGAATCTGGTTATACTAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TAGATT-AGACACTT--TACAAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................T-AGACACTT--TACAAGTAACGGATAT-------ATA---------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TT-AGACACTT--TACAAGTAACGGATAT-------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTATATAGTCGGGAACACTTCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................T-AGACACTT--TACAAGTAACGGATAT-------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------T-T..2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TT-AGACACTT--TACAAGTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TT--TACAAGTAACGGATAT-------ATA---------------------------------AATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TACAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TT-AGACACTT--TACAAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................T-------TTCAACGAATCTGGTTATACTAGATT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT-------TTCAACGAATCTGGTTATACTAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTCAACGAATCTGGTTATACTAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................T-------TTCAACGAATCTGGTTATACTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GACACTT--TACAAGTAACGGATAT-------ATA---------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT-------TTCAACGAATCTGGTTATACTAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TATATAGTCGGGAACACTTCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................TACAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................TACAAGTAACGGATAT-------ATA---------------------------------AATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT-------TTCAACGAATCTGGTTATACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------TGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TACATTA--------------------------------------------------------------------T------------------------------------------------------TGTTTA---------------------ACCTTAAGA-------------------------------------------------GAT..............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTATATAGTCGGGAACACTTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T-------ATA---------------------------------AATGGTT-----------------TGGT-----------------------------TTAAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TACTAGATT-AGACACTT--TACAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GACACTT--TACAAGTAACGGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTACAT--ACTT-------TTCAACGAATCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTT....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................T-AGACACTT--TACAAGTAACGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TT--TACAAGTAACGGATAT-------ATA---------------------------------AATGGTT-----------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TT-AGACACTT--TACAAGTAACGGATAT-------AAT---------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TATACTAGATT-AGACACTT--TACAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTATATAGTCGGGAACACTTCCTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................T--ACTT-------TTCAACGAATCTGGTTATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT-------TTCAACGAATCTGGTTATACTAGATT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACTT--TACAAGTAACGGATAT-------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
........................................................................................TT--TACAAGTAACGGATAT-------ATA---------------------------------AATGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CACTT--TACAAGTAACGGATAT-------ATA---------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TAGATT-AGACACTT--TACAAGTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------------T------------------------------------------------------TGTTTA---------------------ACCTTAAGA-------------------------------------------------GATTA............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTTT------------------------------------------------------------------------------------------------------------------------------T-TC.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------ACCTTAAGA-------------------------------------------------GATTAT-AT-----------------------------------------------------------------C---------------GTT....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCCTTCTGTCTGTTACAT--ACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTGTTACAT--ACTT-------TTCAACGAATCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCCTTCTGTCTGTTACAT--ACTT-------TTCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCCTTCTGTCTGTTACAT--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.2940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................TTCCTTCTGTCTGTTACAT--ACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................TCTGTCTGTTACAT--ACTT-------TTCAACGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGTTACAT--ACTT-------TTCAACGAATCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTGTCTGTTACAT--ACTT-------TTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.2030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCTTCTGTCTGTTACAT--ACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGTTACAT--ACTT-------TTCAACGAATCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCCTTCTGTCTGTTACAT--ACTT-------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AA--------------------------------------TACATTA--------------------------------------------------------------------T------------------------------------------------------TGTTTA---------------------ACAAG......................................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................CTGTTACAT--ACTT-------TTCAACGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCTGTTACAT--ACTT-------TTCAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................TTCCTTCTGTCTGTTACAT--AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCCTTCTGTCTGTTACAT--ACTT-------TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTGTCTGTTACAT--ACTT-------TTCAACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTGTCTGTTACAT--ACTT-------TTCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTCTGTCTGTTACAT--ACTT-------TTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGTCTGTTACAT--ACTT-------TTCAACGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGTCTGTTACAT--ACTT-------TTCAACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.0710000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTCTGTTACAT--ACTT-------TTCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTACAT--ACTT-------TTCAACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTCTGTTACAT--ACTT-------TTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTACAT--ACTT-------TTCAACGAATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................TCCTTCTGTCTGTTACAT--ACTT-------TTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTGTCTGTTACAT--ACTT-------TTCAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGTCTGTTACAT--ACTT-------TTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACACTTTGTGTAGTCGGAAAAGCTTCCTTCTGCCTGTTACAT--ACTT-------TTCAATGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGATAT-------AAT---------------------------------CATAATC-----------CAA------A---TTCCC-----------------------------TTTG-------------------------------------------------------------ATATA--ATTTT---------------------CTG-----------------------------------------------ACTCTATTTGA-----------------------------------------------GTA-------CA------------------ACCCATA--------------------------------AGTTTCGAACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGTTGTCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................ACAT--ACTT-------TTCAATGAATCTAG-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2492.222000008030810000000
..............................TGCCTGTTACAT--ACTT-------TTCAATGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2762.001200110022150000000
....................................................................................TC------TACGAGTAACGGATAT-------AAT---------------------------------CATAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000200000000
..............................TGCCTGTTACAT--ACTT-------TTCAATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2571.571100000054110000000
...........................................................................................................................................................................................................................................................................................................................TG-----------------------------------------------ACTCTATTTGA-----------------------------------------------GTA-------CA------------------ACCCA.........................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
.CACTTTGTGTAGTCGGAAAAGCTTCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.CACTTTGTGTAGTCGGAAAAGCTTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.....TTGTGTAGTCGGAAAAGCTTCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.CACTTTGTGTAGTCGGAAAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------AGTTTCGAACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGTTGTCAA2611.00100000010000000000
.........................................................................................................................................................................................................................................................................................ATATA--ATTTT---------------------CTG-----------------------------------------------ACTCTATTTGA-----------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATA--------------------------------AGTTTCGAACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGTTGTCAA2811.00100000000100000000
...............................................T-------TTCAATGAATCTAG-TATACCCTTTT-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2741.00400000002200000000
.CACTTTGTGTAGTCGGAAAAGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................TCCC-----------------------------TTTG-------------------------------------------------------------ATATA--ATTTT---------------------CTG-----------------------------------------------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
...............................................T-------TTCAATGAATCTAG-TATACCCTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.71500000010400000000
..............................TGCCTGTTACAT--ACTT-------TTCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.71500000012110000000
......................................ACAT--ACTT-------TTCAATGAATCTAG-TATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.57400000000010030000
.....................................TACAT--ACTT-------TTCAATGAATCTAG-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.56500000000410000000
...............................................T-------TTCAATGAATCTAG-TATACCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.50400000020200000000
......................................................................TATACCCTTTT-ACTC------TACGAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
...............................................T-------TTCAATGAATCTAG-TATACCCTTTT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.50200000001100000000
...........................TTCTGCCTGTTACAT--ACTT-------TTCAATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.43300000001100010000
...........................TTCTGCCTGTTACAT--ACTT-------TTCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.43300000020010000000
.............................CTGCCTGTTACAT--ACTT-------TTCAATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.43300000030000000000
......................................ACAT--ACTT-------TTCAATGAATCTAG-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.42500000011210000000
...............................................T-------TTCAATGAATCTAG-TATACCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.38300010011000000000
...........................TTCTGCCTGTTACAT--ACTT-------TTCAATGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3060.33200000001100000000
.............................CTGCCTGTTACAT--ACTT-------TTCAATGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.33200000020000000000
...............................................T-------TTCAATGAATCTAG-TATACCCTTTT-AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100010000000000000
.................................CTGTTACAT--ACTT-------TTCAATGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.25300010001010000000
.....................................TACAT--ACTT-------TTCAATGAATCTAG-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.25300000001101000000
..................................TGTTACAT--ACTT-------TTCAATGAATCTAG-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.25200000010100000000
.......................TTCCTTCTGCCTGTTACAT--ACTT-------TTCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3050.20100000001000000000
.........................CCTTCTGCCTGTTACAT--ACTT-------TTCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2950.20100000000100000000
............................TCTGCCTGTTACAT--ACTT-------TTCAATGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2960.17100000010000000000
.............................CTGCCTGTTACAT--ACTT-------TTCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100000000100000000
.............................CTGCCTGTTACAT--ACTT-------TTCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000010000000000
...........................TTCTGCCTGTTACAT--ACTT-------TTCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14100000001000000000
..............................TGCCTGTTACAT--ACTT-------TTCAATGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14100000000010000000
..............................................TT-------TTCAATGAATCTAG-TATACCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100000000000010000
........................................................................TACCCTTTT-ACTC------TACGAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100000000100000000
.................................CTGTTACAT--ACTT-------TTCAATGAATCTAG-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.11100000000010000000
.......................................................TTCAATGAATCTAG-TATACCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11100000001000000000
....................................TTACAT--ACTT-------TTCAATGAATCTAG-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11100000000010000000
.............................................................................TTTT-ACTC------TACGAGTAACGGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10100000000001000000
..........................................................AATGAATCTAG-TATACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.07110000000000000000
..................................TGTTACAT--ACTT-------TTCAATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.06100000000100000000
...................................................................AG-TATACCCTTTT-ACTC------TACGAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
..................................................................TAG-TATACCCTTTT-ACTC------TACGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
.......................TTCCTTCTGCCTGTTACAT--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000100000000
...........................TTCTGCCTGTTACAT--ACTT-------TTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
..........................................................................CCCTTTT-ACTC------TACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
.......................TTCCTTCTGCCTGTTACAT--ACTT-------TTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
droSec2
ATACTTCATGTAGTCAGCAACGCTTCCATTTGCCTGTTACAT--ACTT-------TTCAACGAATCAAG-TATACCCTTTT-ACTC------TGCGAGTAACGGGTATAACCACAGAG-------------------------G-------AAGCTT--------------A-----G----TTTCC-----------------------------GTAA-------------------------------------------------------------AGCTA--GTTTTGTAA--------------------------------------------------------------GGTGCACCTG--------------------------------------------------------------------CTATTTGCAAAATAA-----A--------------------------------A-CG-------------------------------------------------------------------------------------------------------------CGGAATGCTCTTTGAGTG------------------------CCCATTT---------------GCTTTCTTTATA--------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACAT--ACTT-------TTCAACGAATCTAG-TATACCCTTTT-ACTC------TACGAGTAACGGCTATAATTAGACTT------------------------------------AAACAT-----------T--------------------------------------------TTAAGTAT----------------TAATTTATCGTTATATGAAAAGTCATTTCTCTTAAAATTTGTTAATAAATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTTTTCTTTTTACATTTAAA--------------------------AAGACCATACATTAT------------------GCAATA--ATG-ACCTCACG------------------TATTAGAAAAA-TA-TCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................CGTTATATGAAAAGTCATTTCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.32605100000000
........................................................................................................................................................................................................................................................CGTTATATGAAAAGTCATTTCTCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.11202000000000
..................................................................TAG-TATACCCTTTT-ACTC------TACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
..................................................................................................................................................................................................................................................................................AAATTTGTTAATAAATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTT....................................................................................................................................27160.06101000000000
......................................................................................................................................................................................................................................................ATCGTTATATGAAAAGTCATTTCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCATACATTAT------------------GCAATA--ATG-A...........................................24200.05100100000000
..........................................................................................................................................................................................................................................................................................TAATAAATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTTTTCTTTT.............................................................................................................................26200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--------------------------AAGACCATACATTAT------------------GCAAT...................................................24200.05101000000000
.....................................................................................................................T------------------------------------AAACAT-----------T--------------------------------------------TTAAGTAT----------------TAATTTATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTTAAA--------------------------AAGACCATACATTAT------------------GCA.....................................................28200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--------------------------AAGACCATACATTAT------------------GCAATA--AT..............................................27200.05101000000000
.....................................................................................................................................................................................................................................................................................................TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTTTTCTTTTTACATTTAAA--------------------------AA.......................................................................................27200.05101000000000
.................................................................................................................................................................................................................................................................................................TATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------C---------------GTTTTCTTTTTACATTT......................................................................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAA--------------------------AAGACCATACATTAT------------------GCAATA--AT..............................................28200.05101000000000
droEre2
ATACTTTATTTGGTCGGAAAGGTTTCCTTCTGCCTGTTACAT--ACTT-------TTCAACGAATCTGG-TATACCCTTTT-ACTC------TACGAGTAATGGGTAGAATTATTAAAATTACATTCTTACATCTTTTGTGAGGGTGTGAGTG---------------------------------T---------------GCGCTG-----------------------------------------------------------------------------------------CTTAGGTTAATTTG--------------------------------------------------------------------------------------------------------------------------------------------------TA--------------------------------T-----------------------------------------------------AAGGATAAATCAAATGTTT---------TA--------AATTGAGTTTTGTTTTAAGTCGATGTTTT-GCTAAACT------------------------ATAACAT---------------TCT----------------------------------------------TT----------T--------------------------------------------------------ACTTTATAAT-TC-CTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................T-------TTCAACGAATCTGG-TATACCCTTTT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.0910000001

Generated: 05/18/2015 at 12:58 AM