ID:

dmo_165

Coordinate:

scaffold_6482:1048362-1048449 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.2 -23.6 -23.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
LINEJ1_DMLINEJockey-
mature
star
  1. dmo_165  scaffold_6482:1048362-1048385 -
  2. scaffold_6482:1855902-1855925 +
  3. scaffold_6500:27872659-27872682 -
  4. scaffold_6680:7484342-7484365 -
  5. scaffold_6680:22494994-22495017 +

Sense Strand Reads

TTAAAGACTTACACCCCAACGTCTCAAAACATCGAATTGAACGCGCTTTTACTGATCGGAACCTCACAGTATTGAACATCTACTGTCCCAGGAAACGAGACTGGCGCAGTATTGAGATCAATGAAGAGGATGATGACGAATTGAACGATGCTAAAACAAGACAAAGCATGTTCTTTGTTAATTTACAG
***********************************......((...........((((...((((....((((((...((((((((.((((.........)))).))))))..))..))))))..)))).))))...........))......***********************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
V110
male body
M060
embryo
V041
embryo
..................................................ACTGATCGGAACCTCACAGTATTG.................................................................................................................. 24 0 1 5.00 5 5 0 0 0
..................................................ACTGATCGGAACCTCACAGTATTGAAC............................................................................................................... 27 0 1 3.00 3 2 1 0 0
..................................................ACTGATCGGAACCTCACAGTATTGA................................................................................................................. 25 0 1 3.00 3 0 2 0 1
..................................................ACTGATCGGAACCTCACAGTATTGAACA.............................................................................................................. 28 0 1 3.00 3 2 1 0 0
..................................................................................................................AGATCAATGAAGAGGATGATGACG.................................................. 24 0 5 1.40 7 7 0 0 0
..................................................ACTGATCGGAACCTCACAGTATTGAACCC............................................................................................................. 29 2 1 1.00 1 1 0 0 0
...................................................CTGATCGGAACCTCACAGTATTG.................................................................................................................. 23 0 1 1.00 1 1 0 0 0
..............................................TTTTACTGATCGGAACCTCACAGTAT.................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................AGGATGATGACGAATTGAACGATGC..................................... 25 0 1 1.00 1 1 0 0 0
........................................................CGGAACCTCACAGTATTGAACATTTAC......................................................................................................... 27 1 1 1.00 1 0 0 1 0
..................................................ACTGATCGGAACCTCACAGTATTGAACC.............................................................................................................. 28 1 1 1.00 1 1 0 0 0
...................................................................................................................................GGTGACGAATTGAAGAATGCT.................................... 21 3 4 0.75 3 0 3 0 0
..................................................................................................................AGATCAATGAAGAGGATGATGACGA................................................. 25 0 5 0.40 2 2 0 0 0
..................................................................................................................AGATCAATGAAGAGGATGATGA.................................................... 22 0 5 0.40 2 2 0 0 0
....................................................................................................................................................TGCTAAAACAAGACAAAGCATGTT................ 24 0 3 0.33 1 1 0 0 0
....................................................................................................................................................TGCTAAAACAAGACAAAGCATGTTCT.............. 26 0 3 0.33 1 1 0 0 0
....AGACTTACACCCCAACGTCTCAAAACA............................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0
..................................................................................................................AGATCAATGAAGAGGATGA....................................................... 19 0 5 0.20 1 1 0 0 0
................CAACGTCTCAAAACATCGAATTG..................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0
................CAACGTCTCAAAACATCGAATTGAA................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................TAAAACAAGACAAAGCATGTTCT.............. 23 0 5 0.20 1 0 0 1 0
........................................................................TGAACATCTACTGTCCCAGGAAACGAGAA....................................................................................... 29 1 5 0.20 1 1 0 0 0
........................................................................................................................................................AAAACAAGACAAAGCATGTTCTTTGTTA........ 28 0 5 0.20 1 1 0 0 0
.........................................CGCGCTTTTACTGATCGGAACC............................................................................................................................. 22 0 5 0.20 1 1 0 0 0
................CAACGTCTCAAAACATCGAATTGA.................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0
..........................................................................................................................................................AACAAGACAAAGCATGTTCTTTG........... 23 0 5 0.20 1 1 0 0 0
...................................................................................................................GATCAATGAAGAGGATGATGAC................................................... 22 0 5 0.20 1 1 0 0 0
..................................................................................................................AGATCAATGAAGAGGATGATGACGAA................................................ 26 0 5 0.20 1 1 0 0 0
.......................TCAAAACATCGAATTGAACGCGCTTT........................................................................................................................................... 26 0 5 0.20 1 1 0 0 0
................CAACGTCTCAAAACATCGAATTGAAC.................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0
..................................................................................................................AGATCAATGAAGAGGATGATGAC................................................... 23 0 5 0.20 1 1 0 0 0
......................................................................................CCCAGGAAACGAGACTGGCGATT............................................................................... 23 3 6 0.17 1 1 0 0 0
.............................CATCGAATTGAACGCGCTTTTACTGA..................................................................................................................................... 26 0 6 0.17 1 1 0 0 0
..........................AAACATCGAATTGAACGCGCTT............................................................................................................................................ 22 0 6 0.17 1 1 0 0 0
..........................AAACATCGAATTGAACGCGCTTTTAC........................................................................................................................................ 26 0 6 0.17 1 1 0 0 0
..........................AAACATCGAATTGAACGCGCTTTT.......................................................................................................................................... 24 0 6 0.17 1 1 0 0 0
....................................................................................GTCCCAGGAAACGAGACTGGCGCA................................................................................ 24 0 6 0.17 1 1 0 0 0
..............................ATCGAATTGAACGCGCTT............................................................................................................................................ 18 0 6 0.17 1 1 0 0 0
..........................AAACATCGAATTGAACGCGCT............................................................................................................................................. 21 0 6 0.17 1 1 0 0 0
................................................................................TACTGTCCCAGGAAACGAGACTGGCGCA................................................................................ 28 0 6 0.17 1 1 0 0 0
.....................................................................TATTGCACATCTACAGGCCC................................................................................................... 20 3 9 0.11 1 0 0 1 0
..............................................................................................AGCAGAGTGGCGCAGTATT........................................................................... 19 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

AATTTCTGAATGTGGGGTTGCAGAGTTTTGTAGCTTAACTTGCGCGAAAATGACTAGCCTTGGAGTGTCATAACTTGTAGATGACAGGGTCCTTTGCTCTGACCGCGTCATAACTCTAGTTACTTCTCCTACTACTGCTTAACTTGCTACGATTTTGTTCTGTTTCGTACAAGAAACAATTAAATGTC
***********************************......((...........((((...((((....((((((...((((((((.((((.........)))).))))))..))..))))))..)))).))))...........))......***********************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
M060
embryo
V041
embryo
V110
male body
V049
head
V056
head
..................................................................................................CTGACCGCGTCATAACTCTAGTTACT................................................................ 26 0 1 62.00 62 37 11 12 2 0 0
...................................................................................................TGACCGCGTCATAACTCTAGTTACT................................................................ 25 0 1 34.00 34 23 8 3 0 0 0
.................................................................................................TCTGACCGCGTCATAACTCTAGTTACT................................................................ 27 0 1 9.00 9 4 5 0 0 0 0
.....................................................................................................................................ACTGCTTAACTTGCTACGATTTTGTTCT........................... 28 0 1 9.00 9 9 0 0 0 0 0
...................................................................................................................................CTACTGCTTAACTTGCTACGATTTTGT.............................. 27 0 1 9.00 9 6 3 0 0 0 0
.....................................................................................................................................ACTGCTTAACTTGCTACGATTTTGT.............................. 25 0 1 8.00 8 7 0 0 1 0 0
...................................TAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 25 0 6 8.00 48 43 4 0 1 0 0
......................................................................................................CCGCGTCATAACTCTAGTTACT................................................................ 22 0 1 8.00 8 4 4 0 0 0 0
....................................................................................................GACCGCGTCATAACTCTAGTTACT................................................................ 24 0 1 6.00 6 6 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTAC................................................................. 25 0 1 5.00 5 3 2 0 0 0 0
...........................................................................................................................................TAACTTGCTACGATTTTGTTCTGTTT....................... 26 0 1 4.00 4 4 0 0 0 0 0
......................................................................................................................................CTGCTTAACTTGCTACGATTTTGT.............................. 24 0 1 4.00 4 2 1 1 0 0 0
.....................................................................................................ACCGCGTCATAACTCTAGTTACT................................................................ 23 0 1 3.00 3 3 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTACTT............................................................... 27 0 1 2.00 2 1 1 0 0 0 0
......................................................................................................CCGCGTCATAACTCTAGTTACTTCT............................................................. 25 0 1 2.00 2 0 2 0 0 0 0
.....................................................................................................ACCGCGTCATAACTCTAGTTACTTCT............................................................. 26 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................................................TAACTTGCTACGATTTTGTTCTGTT........................ 25 0 1 2.00 2 2 0 0 0 0 0
...................................................................................................CGACCGCGTCATAACTCTAGTTACT................................................................ 25 1 1 2.00 2 0 2 0 0 0 0
.......................................................................................................CGCGTCATAACTCTAGTTACTTCTCCT.......................................................... 27 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................TACTGCTTAACTTGCTACGATTTTG............................... 25 0 1 2.00 2 2 0 0 0 0 0
..................................TTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 26 0 6 1.83 11 8 3 0 0 0 0
.................................................................................................................................................................GTTTCGTACAAGAAACAATTAAATGT. 26 0 5 1.80 9 9 0 0 0 0 0
....................................AACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 24 0 6 1.67 10 10 0 0 0 0 0
.................................CTTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 27 0 6 1.50 9 6 2 0 1 0 0
................................GCTTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 28 0 6 1.50 9 9 0 0 0 0 0
...............................AGCTTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 29 0 6 1.33 8 8 0 0 0 0 0
............TGGGGTTGCAGAGTTTTGTAGCTT........................................................................................................................................................ 24 0 5 1.20 6 2 4 0 0 0 0
.................................................................................................TCTGACCGCGTCATAACTCTAGTTA.................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................CCGCGTCATAACTCTAGTTACTT............................................................... 23 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................GACCGCGTCATAACTCTAGTTAC................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................CTCTGACCGCGTCATAACTCTAGTTACT................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATGACTCTAGTTACT................................................................ 26 1 1 1.00 1 0 0 1 0 0 0
.......................................................................AACTTGTAGATGACAGGGTCCTTTGCT.......................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
......................................................TAGCCTTGGAGTGTCATAACTTGTAGAT.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................TACTGCTTAACTTGCTACGATTTTGT.............................. 26 0 1 1.00 1 0 0 0 1 0 0
.................................................................TGTCATAACTTGTAGATGACAGGGT.................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................TCTGACCGCGTCATAACTCTAGTTAGT................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................TCTGACCGCGTCATAACTC........................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................CCTGACCGCGTCATAACTCTAGTTACT................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................ATACTGCTTAACTTGCTACGATTTTG............................... 26 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTACTTCT............................................................. 29 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGCTCTGACCGCGTCATAACTCTAGT.................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................TGACCGCGTCATAACTCTAGTTAC................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................AGCCTTGGAGTGTCATAACTTGTAGAT.......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTACTTC.............................................................. 28 0 1 1.00 1 1 0 0 0 0 0
.....................................................................ATAACTTGTAGATGACAGGGTCCTTT............................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................CCGCGTCATAACTCTAGTTACTTCTCCT.......................................................... 28 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................ACTGCTTAACTTGCTACGATTTTGTT............................. 26 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................CTGCTTAACTTGCTACGATTTTGTTCTGT......................... 29 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................CGTCATAACTCTAGTTACTTCTCCT.......................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................CCTCATAACTTGTAGATGACAGGGTCCT............................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................CTACTGCTTAACTTGCTACGATTTTG............................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................TTAACTTGCTACGATTTTGTTCTGTT........................ 26 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCCAGTTAC................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGCCCGCGTCATAACTCTAGTTACT................................................................ 26 1 1 1.00 1 0 0 0 0 1 0
....................................................................................................................................TACTGCTTAACTTGCTACGATTTTGTTC............................ 28 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................ACTACTGCTTAACTTGCTACGATTTT................................ 26 0 1 1.00 1 1 0 0 0 0 0
.........................................................CCTTGGAGTGTCATAACTTGT.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................CCTACTACTGCTTAACTTGCTACGAT................................... 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................CTAGCCTTGGAGTGTCATAACTTGTAGAT.......................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................CTGACCGCTTCATAACTCTAGTTACT................................................................ 26 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................CCTTTGCTCTGACCGCGTCATAACTC........................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TCTCCTACTACTGCTTAACTTGCT........................................ 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAGCTCTAGTTACT................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................ACTGCTTAACTTGCTACGATT.................................. 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................TAACTTGCTACGAATTTGTTCTGTT........................ 25 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTACC................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................AACTTGCTACGATTTTGTTCTGTTT....................... 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................CTCCTACTACTGCTTAACTTGCTACGAT................................... 28 0 1 1.00 1 1 0 0 0 0 0
....................................................................CATAACTTGTAGATGACAGGGTCCTTT............................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................ACTACTGCTTAACTTGCTACGATTTTGT.............................. 28 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGTGTCATAACTCTAGTTAC................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................CTGCTTAACTTGCTACGATTTTGTTCT........................... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................TCGGACCGCGTCATAACTCTAGTTAGT................................................................ 27 2 1 1.00 1 0 1 0 0 0 0
..................................................................GTCATAACTTGTAGATGACAGGGTCCT............................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTGACCGCGTCATAACTCTAGTTACTG............................................................... 27 1 1 1.00 1 1 0 0 0 0 0
................................................................................................CTCTGACCGCGTCATAACTCTAGTTAC................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.............GGGGTTGCAGAGTTTTGTAGCTT........................................................................................................................................................ 23 0 5 0.80 4 3 0 0 0 0 1
...........GTGGGGTTGCAGAGTTTTGTAGCTT........................................................................................................................................................ 25 0 5 0.60 3 3 0 0 0 0 0
...............................AGCTTAACTTGCGCGAAAATGACTAGCC................................................................................................................................. 28 0 6 0.50 3 3 0 0 0 0 0
.....................................................GTAGCATTGGACTGTCATAAC.................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 1
.....................................ACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 23 0 6 0.50 3 2 1 0 0 0 0
....TCTGAATGTGGGGTTGCAGAGTTTT............................................................................................................................................................... 25 0 4 0.50 2 1 1 0 0 0 0
....TCTGAATGTGGGGTTGCAGAGT.................................................................................................................................................................. 22 0 4 0.50 2 0 1 0 1 0 0
.........................................GCGCGAAAATGACTAGCCTTGGAGTGT........................................................................................................................ 27 0 5 0.40 2 2 0 0 0 0 0
..................................................................................................................................................................TTTCGTACAAGAAACAATTAAATGT. 25 0 5 0.40 2 1 1 0 0 0 0
..............GGGTTGCAGAGTTTTGTAGCTTAACTT................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0 0
.....................................ACTTGCGCGAAAATGACTAGCCTT............................................................................................................................... 24 0 5 0.40 2 2 0 0 0 0 0
..................................CTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 26 1 6 0.33 2 2 0 0 0 0 0
......................................CTTGCGCGAAAATGACTAGCCT................................................................................................................................ 22 0 6 0.33 2 2 0 0 0 0 0
...................................AAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 25 1 6 0.33 2 1 1 0 0 0 0
.............................GTAGCTTAACTTGCGCGAAAATGA....................................................................................................................................... 24 0 6 0.33 2 2 0 0 0 0 0
............................................................................................................................TCTCCTACTACTGCTTAACT............................................ 20 0 4 0.25 1 1 0 0 0 0 0
....TCTGAATGTGGGGTTGCAGAGTTTTGT............................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0
......................................................................................................................GTTACTTCTCCTACTACTGCTTAAC............................................. 25 0 4 0.25 1 1 0 0 0 0 0
......TGAATGTGGGGTTGCAGAGTTT................................................................................................................................................................ 22 0 4 0.25 1 0 1 0 0 0 0
...TTCTGAATGTGGGGTTGCAGAGTT................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0
........................................................................................................................TACTTCTCCTACTACTGCTTAACTT........................................... 25 0 4 0.25 1 1 0 0 0 0 0
.......GAATGTGGGGTTGCAGAGTTTTGT............................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0
.....CTGAATGTGGGGTTGCAGAGTTTT............................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0
...TTCTGAATGTGGGGTTGCAGAGTTTT............................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
.............GGGGTTGCAGAGTTTTGTAGCT......................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................TTTGTTCTGTTTCGTACAAGAAACAATT....... 28 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................TCTAGTTACTTCTCCTACTACTGCTT................................................ 26 0 5 0.20 1 1 0 0 0 0 0
.........................................GCGCGAAAATGACTAGCCTTGGAGTG......................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
...........GTGGGGTTGCAGAGTTTTGTAGCTTA....................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
..........TGTGGGGTTGCAGAGTTTTGTAGCTT........................................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0
.....................................ACTTGCGCGAAAATGACTAGCCTTGG............................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0 0
...........................................GCGAAAATGACTAGCCTTGGAGTGT........................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................TTCGTACAAGAAACAATTAAATGT. 24 0 5 0.20 1 0 1 0 0 0 0
........AATGTGGGGTTGCAGAGTTTTGTAGCT......................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
......................................CTTGCGCGAAAATGACTAGCCTTGGAG........................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
........................................TGCGCGAAAATGACTAGCCTTGGAGT.......................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
............TGGGGTTGCAGAGTTTTGTAGCT......................................................................................................................................................... 23 0 5 0.20 1 0 1 0 0 0 0
..........................................................................TTGTAGATGACAGGGTCCTTTGC........................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0
.............GGGGTTGCAGAGTTTTGTAGCTTAA...................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
.......................................TTGCGCGAAAATGACTAGCCTTGGAGT.......................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.........................................GCGCGAAAATGACTACCCTTGGAGTGT........................................................................................................................ 27 1 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................GTCGTACAAGAAACAATTAAATGT. 24 1 5 0.20 1 1 0 0 0 0 0
.........ATGTGGGGTTGCAGAGTTTTGT............................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0 0
.........................................GCGCGAAAATGACTAGCCTTGGAGT.......................................................................................................................... 25 0 5 0.20 1 0 0 0 1 0 0
................................................................................................................................................................TGTTTCGTACAAGAAACAATTAAATGT. 27 0 5 0.20 1 1 0 0 0 0 0
................GTTGCAGAGTTTTGTAGCTTAACT.................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
........................................TGCGCGAAAATGACTAGCCTTGGAGTGT........................................................................................................................ 28 0 5 0.20 1 1 0 0 0 0 0
....................................AACTTGCGCGAAAATGACTAGCCTT............................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
................................GCTTAACTTGCGCGAAAATGACTAGCC................................................................................................................................. 27 0 6 0.17 1 1 0 0 0 0 0
................................ACTTAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 28 1 6 0.17 1 1 0 0 0 0 0
............................TGTAGCTTAACTTGCGCGAAAATGACT..................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
.................................ATTAACTTGCGCGAAAATGACTAGC.................................................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0
..................................CTAACTTGCGCGAAAATGA....................................................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0
.......................................TTGCGCGAAAATGACTAGCCT................................................................................................................................ 21 0 6 0.17 1 1 0 0 0 0 0
...............................AGCTTAACTTGCGCGAAAATGACTAGC.................................................................................................................................. 27 0 6 0.17 1 1 0 0 0 0 0
.......................................................................................GGTCCTTTGCTCTGACCGCGT................................................................................ 21 0 6 0.17 1 1 0 0 0 0 0
...................................TAACTTGCGCGAAAATGACTATCCT................................................................................................................................ 25 1 6 0.17 1 0 1 0 0 0 0
..................................TTAACTTTCGCGAAAATGACTAGCCT................................................................................................................................ 26 1 6 0.17 1 1 0 0 0 0 0
.....................................................................................................................................................................CGTACAAGAAACAATTAAATGT. 22 0 6 0.17 1 0 1 0 0 0 0
...................................CAACTTGCGCGAAAATGACTAGCCT................................................................................................................................ 25 1 6 0.17 1 0 1 0 0 0 0
..................................TTAACTTGCGCGAAAATGACTAGACT................................................................................................................................ 26 1 6 0.17 1 0 1 0 0 0 0
...................................TAACTTGCGCGAAAATGACTAGCC................................................................................................................................. 24 0 6 0.17 1 1 0 0 0 0 0
...................................TAACTTGCGCGAAAATGA....................................................................................................................................... 18 0 6 0.17 1 1 0 0 0 0 0
.......................................................................................................................................................................TACAAGAAACAATTAAATGTC 21 0 6 0.17 1 1 0 0 0 0 0
..................................TTAACTTGCGCGAAAATGACTAGCC................................................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0
....................................................................................CAGGGTCCTTTGCTCTGACCGTC................................................................................. 23 2 6 0.17 1 0 1 0 0 0 0
...........................TTGTAGCTTCACTTGCGCGAAAAT......................................................................................................................................... 24 1 6 0.17 1 0 1 0 0 0 0
...............CGTTGTAGGGTTTTGTAGCT......................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 1
..................TGCAGAATTTTTTAGCTTA....................................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:1048312-1048499 - dmo_165 TTAAAGA----CTTACACCCCAACGTCTCAAAACATCGAATTGAACGCGCTTTTACTGATCGGAACCTCACAGTATTGAACATCTACTGTCCCAGG-AAACGAGACTGGCGCAGTATTGAGATCAATGAAGAGGATGATGACGAATTGAACGATGCTAAAACAAGACAAAGCATGTTCTTTGTTAATT-TACAG
droVir3 scaffold_12958:2116777-2116952 - GTAGGGA----TAT-CATGCCAATGTCCCAAATGATC---TTAAG--CGCATTCTCTTTTAAAGGTTGCACAGT----AACATATATTGCCCAAGA-AAAATGGACTTGCGC-ACATC-CGATCAACGAGGAGGACGATGAGCAAATAAATAACGCGAAGACTAGACAAAATATGTTCTACGTTAATA-TCGAA
droGri2 scaffold_6547:1729-1771 + TATTAAAACAAAATGCATGTTA------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTTTGTTTAGC-TACAA
droWil2 scf2_1100000003657:2973-3156 + TTCGGGA----TATTCATCCAAATGTACCAAATGTACCAA----ATGTACTTTTACTGACCAGGGACACGCAGTCATGAATATCTACTGCCCTAGG-AAACCGGATTGGCGCAACATTGAAATCAATGAAGAGGATGATGAAGATGTTAATAATGCGAAAACTAGACAAAACATGTTTTTTGTCAATT-TAAAA
dp5 Unknown_singleton_3490:7839-8026 + TTCGAGA----TATCTATGCAAATGTACCAAAACACTTAATTGAGCACACGTTCACCGACAAGGGCTTCACAGTCATGAACATCTACTGCCCCAGG-AAGCCAAACTGGCGTAATATTGAAATAAATGAAGAGGATGATCATGAAATAAATAACTTAAAAACAAGACAGAGTATGTTCTACGTGAACC-TAAAG
droPer2 scaffold_3695:1826-2013 + TTCGAGA----TATCCATCCAAATGTACCAAAACACTTAATTGAGCGCACGTTCACCGACAAGGGCTTCACAGTCATGAACATCTACTGCCCCAGG-AAGCCAAACTGGCGTAATATTGAAATAAATGAAGAGGATGATCATGAAATAAATAACTTAAAAACAAGACAGAGTATGTTCTACGTGAACC-TAAAG
droAna3 scaffold_13339:2435318-2435504 - TCAAAGG----AATCCATTCTAACGTTCCAAAATCACAAATTGAACAGGGATTTACTGACAAGGGCTTTGAAGTCCTTAACATATACTGCCCCAAA-AAGTCTGATTGGAG-AACATTCCGGTTAACGAAGATGATAACGAAGCTACAATAAATTTTAAAACTAGGCAAAATTTATTTTTTGTCAATT-TAAAG
droBip1 scf7180000393895:6239-6426 - TCAAAGG----AATCCATTCAAACGTACCGGAATCACAGATTGAACACGGATTTACTGACGACGGCTTGGAAGTCCTTAACATATACTGCCCCAAA-AATACAGATTGGAAGAACATAGTGGTTAACGAAGATGATAACGAAGCCACAATAAATTTTAAAACTAGTCAAAACTTGTTTTCTGTTAACC-TAAAG
droKik1 scf7180000302768:24963-25150 + TACGTGA----TATTCATCCCAGCGTCCCAACAGCTGTAATAAAAAACGCTTTTACAGACAAGGGCTTTAAGGTCTTAAATGTTTACTGTCCCAGG-AAACCGGATTGGCGTAATATACCAGTCAATGAAAATGATGGCGCCGAAATTAATTATATAAAAACAAGGCAAAACAAGTTTTATGTCAATC-TGCAA
droFic1 scf7180000451782:383-570 + TGAAAGG----AATACATGCCAATGTTCCTAAATCACAAATCGAAGAAACATTTTCTGATAACGGCTTTGAAGTCCTTAATATCTATTGTCCCAAG-AAATCTGGCTGGAGGAATATTCAGATTAACGAGGAAGACTCTGAGGCCACAATCAACTACAAAACAAGGCAAAACCTATTTTATGTTAACC-TCAAG
droEle1 scf7180000490546:3579-3766 - TTAAAGG----CATCCATGCTAATGTTCCCAAATCACAGATTGAACAATCATTTAGTGATCACGGCTTTGAGGTGCTAAATATATACTGCCCCAAA-AAGACAGACTGGAAGAACATACAGGTCAATGAGGAAGACAATGAAAATACAATAAACTACAAAACTAGACAAAATTTATTCTATATCAACC-TAAAA
droRho1 scf7180000772598:14251-14438 + TAAGAGA----TATTCACCCAAATGTTCCGAAACAAGTAATTGAACGCACCTTTACTGACAAGGGCTTCACAGTTTTAAATATGTATTGTCCTAGA-AAAACTGACTGGCGAAATATTAAAATAAATGAGGAGGATGATGACGAAATCAACAACACAAAGACCCGGCAAAACATGTTTTTTGTTAACC-TTCAG
droBia1 scf7180000302411:170866-170920 + TTAAAGG----AATCCACTTAAACGTACCGAAATCACAGATAGAACAGGGGCTCACTGA---------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413742:1094-1281 + TTAAAGG----CATCCATGCTAATGTTCCCAAATCACAGATTGAACAATCATTTAGTGACCACGGCTTTGAGGTGCTAAATATATACTGCCCCAAA-AAGACAGACTGGAAGAACATACAGGTCAATGAGGAAGACAATGAAAATACAATAAACTACAAAACTAGGCAAAATTTATTCTATATCAACC-TAAAA
droEug1 scf7180000408988:20241-20420 - TTAAAAG----AATCCATTCGAACGTACCAAAATCACAAGTAGAACAGGGATTTACTGACTACGGCTTTGAGGTCCTTAACATATACTGCCCCAAAAAAAACTTATTGGATGAACATTCAGGTTAATGAAGAAGAT---------ACAATAAATTACAAAACAAGGCAAACTCTGTTCTATGTCAACC-TTAAA
dm3 chr2L:48739-48927 + TTAAAGG----AATCCATGCTAATGTTCCTAGTTCGCAGATAGAACAAGCATTTAGTGATCACGGCTATGAGGTCCTTAATATCTATTGCCCCAGA-AAGTCTGACTGGAAGAACATTCAGGTAAACGAAGATGATAATGAAGCTACAAAAAACTTCAAAACTAGACAAAATTTGTTTTATATTAATCTTAAAC
droSim2 node_88730:3022-3209 + TGAAGAA----CATACACTCAACTGTCCCAAGAGAAGAAATAGAGCGCTGCTTCACAGACAAAGGCTTCGTTGTACTGAACATCTACTCCCCAAGG-AAGCCTGGCTGGAATAAAATCTTGGCTGGTGGAAATGACGACGAAGAAGCCATTAATGCACAAACTAGACAAAATCTGTTCTTTGTCAATC-TTAAG
droSec2 scaffold_1504:3376-3563 + TGAAAAA----CATACACTCAACTGTCCCAAAAGAAGAAATAGAGCGCTGCTTCACAGACAAAGTCTTCGTTGTACTGAACATCTACTCCCCAAGG-AATCCTGGCTGGAATAAAATCTTGGCTGGTGGAAATGACGACGAAGAAGTCATTATCGCACAAACTAGACAAAATCTGTTCTTTGTAAATC-TTAAG
droYak3 2L:22323166-22323353 + TTAAAAA----CATTCACTCCACTGTTCCTAAAGAATTAATTGAGCGAGCTTTCTCTGAAAAGGGTTTCTGTGTTCTCAACACTTACTGCCCGAGG-AGACCTGATTGGCGAGAAATTCCAATTGAAGATGGATCTGACGAGCAAGCAGTCAATGCTAAAACTAGACAA-ATCTATTTTATGTCAATCCTCACG
droEre2 scaffold_4929:24206433-24206620 + TCAAGGG----AATGCATGCAAGTGTTCCCAAGGAACAAATTAAGAATGCATTTGCTGATCTTGGTTACGAAACTCTCAACATATATTGTCCGAGA-AAAGGAGACTGGCAGAACGAACAAATCTGTGATGGGGATGACGAAGCGGCTATCAACCACAAGACCAGACAAAACCTGTTCTTCGTTAATC-TAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTAAAGA----CTTACACCCCAACGTCTCAAAACATCGAATTGAACGCGCTTTTACTGATCGGAACCTCACAGTATTGAACATCTACTGTCCCAGG-AAACGAGACTGGCGCAGTATTGAGATCAATGAAGAGGATGATGACGAATTGAACGATGCTAAAACAAGACAAAGCATGTTCTTTGTTAATT-TACAGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
......................................................ACTGATCGGAACCTCACAGTATTG....................................................................................................................2415.005500000
......................................................ACTGATCGGAACCTCACAGTATTGAAC.................................................................................................................2713.003200001
......................................................ACTGATCGGAACCTCACAGTATTGA...................................................................................................................2513.003010002
......................................................ACTGATCGGAACCTCACAGTATTGAACA................................................................................................................2813.003200001
.......................................................................................................................AGATCAATGAAGAGGATGATGACG...................................................2451.407700000
......................................................ACTGATCGGAACCTCACAGTATTGAACCC...............................................................................................................2911.001100000
.......................................................CTGATCGGAACCTCACAGTATTG....................................................................................................................2311.001100000
..................................................TTTTACTGATCGGAACCTCACAGTAT......................................................................................................................2611.001100000
...................................................................................................................................AGGATGATGACGAATTGAACGATGC......................................2511.001100000
......................................................ACTGATCGGAACCTCACAGTATTGAACC................................................................................................................2811.001100000
.......................................................................................................................AGATCAATGAAGAGGATGATGACGA..................................................2550.402200000
.......................................................................................................................AGATCAATGAAGAGGATGATGA.....................................................2250.402200000
.........................................................................................................................................................TGCTAAAACAAGACAAAGCATGTT.................2430.331100000
.........................................................................................................................................................TGCTAAAACAAGACAAAGCATGTTCT...............2630.331100000
....AGA----CTTACACCCCAACGTCTCAAAACA...............................................................................................................................................................2740.251100000
.......................................................................................................................AGATCAATGAAGAGGATGA........................................................1950.201100000
....................CAACGTCTCAAAACATCGAATTG.......................................................................................................................................................2350.201100000
....................CAACGTCTCAAAACATCGAATTGAA.....................................................................................................................................................2550.201100000
............................................................................................................................................................TAAAACAAGACAAAGCATGTTCT...............2350.201000010
............................................................................TGAACATCTACTGTCCCAGG-AAACGAGAA........................................................................................2950.201100000
.............................................................................................................................................................AAAACAAGACAAAGCATGTTCTTTGTTA.........2850.201100000
.............................................CGCGCTTTTACTGATCGGAACC...............................................................................................................................2250.201100000
....................CAACGTCTCAAAACATCGAATTGA......................................................................................................................................................2450.201100000
...............................................................................................................................................................AACAAGACAAAGCATGTTCTTTG............2350.201100000
........................................................................................................................GATCAATGAAGAGGATGATGAC....................................................2250.201100000
.......................................................................................................................AGATCAATGAAGAGGATGATGACGAA.................................................2650.201100000
...........................TCAAAACATCGAATTGAACGCGCTTT.............................................................................................................................................2650.201100000
....................CAACGTCTCAAAACATCGAATTGAAC....................................................................................................................................................2650.201100000
.......................................................................................................................AGATCAATGAAGAGGATGATGAC....................................................2350.201100000
..........................................................................................CCCAGG-AAACGAGACTGGCGATT................................................................................2360.171100000
.................................CATCGAATTGAACGCGCTTTTACTGA.......................................................................................................................................2660.171100000
..............................AAACATCGAATTGAACGCGCTT..............................................................................................................................................2260.171100000
..............................AAACATCGAATTGAACGCGCTTTTAC..........................................................................................................................................2660.171100000
..............................AAACATCGAATTGAACGCGCTTTT............................................................................................................................................2460.171100000
........................................................................................GTCCCAGG-AAACGAGACTGGCGCA.................................................................................2460.171100000
..................................ATCGAATTGAACGCGCTT..............................................................................................................................................1860.171100000
..............................AAACATCGAATTGAACGCGCT...............................................................................................................................................2160.171100000
....................................................................................TACTGTCCCAGG-AAACGAGACTGGCGCA.................................................................................2860.171100000
droVir3
GTAGGGA----TAT-CATGCCAATGTCCCAAATGATC---TTAAG--CGCATTCTCTTTTAAAGGTTGCACAGT----AACATATATTGCCCAAGA-AAAATGGACTTGCGC-ACATC-CGATCAACGAGGAGGACGATGAGCAAATAAATAACGCGAAGACTAGACAAAATATGTTCTACGTTAATA-TCGAASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.............................................................................................................................ACGAGGAGGACGATGAGCAAA................................................2111.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TAACGCGAAGACTAGACAAAATATGTTC................2811.001000010000000000000000000000000000000000000000000000000000000000
................................TGATC---TTAAG--CGCATTCTCTTTTAAAGG.................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................TTCTCTTTTAAAGGTTGCACAGT----AACA................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droGri2
TATTAAAACAAAATGCATGTTA------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTTTTGTTTAGC-TACAASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
TTCGGGA----TATTCATCCAAATGTACCAAATGTACCAA----ATGTACTTTTACTGACCAGGGACACGCAGTCATGAATATCTACTGCCCTAGG-AAACCGGATTGGCGCAACATTGAAATCAATGAAGAGGATGATGAAGATGTTAATAATGCGAAAACTAGACAAAACATGTTTTTTGTCAATT-TAAAASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.................................................CTTTTACTGACCAGGGACACGCAG.........................................................................................................................2411.00101000
.......................................................CTGACCAGGGACACGCAGTCATGA...................................................................................................................2411.00101000
.............................................TGTACTTTTACTGACCAGGGACACGCA..........................................................................................................................2711.00101000
...........................................................CCAGGGACACGCAGTCATGAATATC..............................................................................................................2511.00100010
..............................................................GGGACACGCAGTCATGAATATCTAC...........................................................................................................2511.00100010
............................................................................TGAATATCTACTGCCCTAGG-AAACCGGA.........................................................................................2811.00101000
..............................................................................................................................................GATGTTAATAATGCGAAAACT...............................2120.50101000
..............................................................................................................................................................AAACTAGACAAAACATGTTTTTTGT...........2520.50101000
...................................................................................................................................................TAATAATGCGAAAACTAGACAAAACATG...................2820.50100010
........................................................................................................................AATCAATGAAGAGGATGATGA.....................................................2120.50100010
...................................................................................................................ATTGAAATCAATGAAGAGGATGATGA.....................................................2620.50100010
dp5
TTCGAGA----TATCTATGCAAATGTACCAAAACACTTAATTGAGCACACGTTCACCGACAAGGGCTTCACAGTCATGAACATCTACTGCCCCAGG-AAGCCAAACTGGCGTAATATTGAAATAAATGAAGAGGATGATCATGAAATAAATAACTTAAAAACAAGACAGAGTATGTTCTACGTGAACC-TAAAGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
....................................................TCACCGACAAGGGCTTCACAGTCA......................................................................................................................2411.0010100000000
droPer2
TTCGAGA----TATCCATCCAAATGTACCAAAACACTTAATTGAGCGCACGTTCACCGACAAGGGCTTCACAGTCATGAACATCTACTGCCCCAGG-AAGCCAAACTGGCGTAATATTGAAATAAATGAAGAGGATGATCATGAAATAAATAACTTAAAAACAAGACAGAGTATGTTCTACGTGAACC-TAAAGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.......................................................................................................................AAATAAATGAAGAGGATGATCATGAA.................................................2650.402020000
.......................................................................................................................AAATAAATGAAGAGGATGATCATGA..................................................2550.402020000
.......................................................................................................................AAATAAATGAAGAGGATGATCATG...................................................2450.402020000
...................................................................TCACAGTCATGAACATCTACTGCCC......................................................................................................2560.332020000
.........................................................................TCATGAACATCTACTGCCCCAGG-AA...............................................................................................2560.332200000
............................................................................TGAACATCTACTGCCCCAGG-AAGCCAAAC........................................................................................2960.332110000
.........................................................................TCATGAACATCTACTGCCCCAGG-A................................................................................................2460.332200000
.......................................................................................................................AAATAAATGAAGAGGATGATCA.....................................................2250.201010000
........................................................................................................................AATAAATGAAGAGGATGATC......................................................2050.201010000
........................................................................................................................AATAAATGAAGAGGATGATCATG...................................................2350.201010000
.......................................................................................................................AAATAAATGAAGAGGATGATC......................................................2150.201010000
...........................................................CAAGGGCTTCACAGTCATGAACATC..............................................................................................................2560.171010000
.........................................................................................................................ATAAATGAAGAGGATGATA......................................................1960.171010000
...............................................CACGTTCACCGACAAGGGCTT..............................................................................................................................2160.171010000
........................................................................GTCATGAACATCTACTGCCCC.....................................................................................................2160.171010000
..................................................................................................................................................................AAGACAGAGTATGTTCTACGTGA.........2360.171010000
........................................................................................GCCCCAGG-AAGCCAAACTGGCGT..................................................................................2360.171000100
..................................................................TTCACAGTCATGAACATCTACTGCCC......................................................................................................2660.171010000
.......................................................................................TGCCCCAGG-AAGCCAAACTGGC....................................................................................2260.171010000
..................................................................................TCTACTGCCCCAGG-AAGCCAAACTGGCG...................................................................................2860.171010000
.........................................................................TCATGAACATCTACTGCCC......................................................................................................1960.171100000
...............................................CACGTTCACCGACAAGGGCTTCACAG.........................................................................................................................2660.171010000
...........................................................................................................................................................TAAAAACAAGACAGAGTATGTTCTACGT...........2870.141010000
droAna3
TCAAAGG----AATCCATTCTAACGTTCCAAAATCACAAATTGAACAGGGATTTACTGACAAGGGCTTTGAAGTCCTTAACATATACTGCCCCAAA-AAGTCTGATTGGAG-AACATTCCGGTTAACGAAGATGATAACGAAGCTACAATAAATTTTAAAACTAGGCAAAATTTATTTTTTGTCAATT-TAAAGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
........................................TTGAACAGGGATTTACTGACAAGGGC................................................................................................................................2690.444000040
.........................................TGAACAGGGATTTACTGACAAGGGC................................................................................................................................2590.333011010
.............................................................................................................................ACGAAGATGATAACGAAGCTACAA.............................................2490.222200000
..........................................GAACAGGGATTTACTGACAAGGGC................................................................................................................................2490.222100001
.........................................................................TCCTTAACATATACTGCCCCAAA-AAGTCT...........................................................................................2960.171100000
.........................................................................TCCTTAACATATACTGCCCCAAA-A................................................................................................2470.141100000
.........................................................................TCCTTAACATATACTGCCCCAA...................................................................................................2270.141100000
.............TCCATTCTAACGTTCCAAAATCACAAAT.........................................................................................................................................................2880.131010000
......G----AATCCATTCTAACGTTCCAAAA.................................................................................................................................................................2380.131100000
...........................................................................................................................TAACGAAGATGATAACGAAGCTACAATA...........................................2880.131010000
.............................................................................................................................ACGAAGATGATAACGAAGCTACAATA...........................................2680.131010000
.............................AAAATCACAAATTGAACAGGGAC..............................................................................................................................................2390.111010000
.........................................TGAACAGGGATTTACTGACAAGGT.................................................................................................................................2490.111001000
...................................ACAAATTGAACAGGGATTTACTGAC......................................................................................................................................2590.111100000
.............................................CAGGGATTTACTGACAAGGGCTTT.............................................................................................................................24100.101100000
...............................................................................................................................GAAGATGATAACGAAGCTACAATA...........................................24100.101010000
.............................................CAGGGATTTACTGACAAGGGCTTG.............................................................................................................................24100.101100000
.............................................CAGGGATTTACTGACAAGGGCTTTG............................................................................................................................25100.101100000
.............................................CAGGGATTTACTGACAAGGGCT...............................................................................................................................22100.101010000
............................................ACAGGGATTTACTGACAAGGGC................................................................................................................................22100.101010000
..........................................................................................................................................................TTTAAAACTAGGCAAAATTTATT.................23120.081010000
.............................................................................................................................................................AAAACTAGGCAAAATTTATTTTTTGTC..........27120.081010000
..........................................................................................................................................................TTTAAAACTAGGCAAAATTTATTTT...............25120.081010000
.............................................................................................................................................AGCTACAATAAATTTTAAAACTAGG............................25130.081100000
droBip1
TCAAAGG----AATCCATTCAAACGTACCGGAATCACAGATTGAACACGGATTTACTGACGACGGCTTGGAAGTCCTTAACATATACTGCCCCAAA-AATACAGATTGGAAGAACATAGTGGTTAACGAAGATGATAACGAAGCCACAATAAATTTTAAAACTAGTCAAAACTTGTTTTCTGTTAACC-TAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
TACGTGA----TATTCATCCCAGCGTCCCAACAGCTGTAATAAAAAACGCTTTTACAGACAAGGGCTTTAAGGTCTTAAATGTTTACTGTCCCAGG-AAACCGGATTGGCGTAATATACCAGTCAATGAAAATGATGGCGCCGAAATTAATTATATAAAAACAAGGCAAAACAAGTTTTATGTCAATC-TGCAASizeHit CountTotal NormTotal
No Reads
droFic1
TGAAAGG----AATACATGCCAATGTTCCTAAATCACAAATCGAAGAAACATTTTCTGATAACGGCTTTGAAGTCCTTAATATCTATTGTCCCAAG-AAATCTGGCTGGAGGAATATTCAGATTAACGAGGAAGACTCTGAGGCCACAATCAACTACAAAACAAGGCAAAACCTATTTTATGTTAACC-TCAAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTAAAGG----CATCCATGCTAATGTTCCCAAATCACAGATTGAACAATCATTTAGTGATCACGGCTTTGAGGTGCTAAATATATACTGCCCCAAA-AAGACAGACTGGAAGAACATACAGGTCAATGAGGAAGACAATGAAAATACAATAAACTACAAAACTAGACAAAATTTATTCTATATCAACC-TAAAASizeHit CountTotal NormTotal
No Reads
droRho1
TAAGAGA----TATTCACCCAAATGTTCCGAAACAAGTAATTGAACGCACCTTTACTGACAAGGGCTTCACAGTTTTAAATATGTATTGTCCTAGA-AAAACTGACTGGCGAAATATTAAAATAAATGAGGAGGATGATGACGAAATCAACAACACAAAGACCCGGCAAAACATGTTTTTTGTTAACC-TTCAGSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAAGG----AATCCACTTAAACGTACCGAAATCACAGATAGAACAGGGGCTCACTGA---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTAAAGG----CATCCATGCTAATGTTCCCAAATCACAGATTGAACAATCATTTAGTGACCACGGCTTTGAGGTGCTAAATATATACTGCCCCAAA-AAGACAGACTGGAAGAACATACAGGTCAATGAGGAAGACAATGAAAATACAATAAACTACAAAACTAGGCAAAATTTATTCTATATCAACC-TAAAASizeHit CountTotal NormTotal
No Reads
droEug1
TTAAAAG----AATCCATTCGAACGTACCAAAATCACAAGTAGAACAGGGATTTACTGACTACGGCTTTGAGGTCCTTAACATATACTGCCCCAAAAAAAACTTATTGGATGAACATTCAGGTTAATGAAGAAGAT---------ACAATAAATTACAAAACAAGGCAAACTCTGTTCTATGTCAACC-TTAAASizeHit CountTotal NormTotal
No Reads
dm3
TTAAAGG----AATCCATGCTAATGTTCCTAGTTCGCAGATAGAACAAGCATTTAGTGATCACGGCTATGAGGTCCTTAATATCTATTGCCCCAGA-AAGTCTGACTGGAAGAACATTCAGGTAAACGAAGATGATAATGAAGCTACAAAAAACTTCAAAACTAGACAAAATTTGTTTTATATTAATCTTAAACSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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.................................................CATTTAGTGATCACGGCTATGAGGT........................................................................................................................251872.441304000000010000000000000411000000000000103014002210300050000001000000000000000000000000001000000000100000000000000000000000000000000020500110010001014734590114411000000000000000000000000000000000303000166022000000600010000012003158219714591094395000000000000000000001000000000000000000000000000000000000002001001110700000019660000000000000041057000000
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................................TTCGCAGATAGAACAAGCATTTAGT.........................................................................................................................................251825.784640000000000000000000000200000000000000050001010200521110000010000000000000000000000000000000000000000000000000000000000000000000000031001010511134345260414760000000000000000000000000000000000020000100660040366070000030036304784224480000000000000000000000000000000000000000000000000000000000001000016140100000028350000000000000061574000000
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.................................................CATTTAGTGATCACGGCTATGAGGTCC......................................................................................................................271815.0027000100000000000000000010000000000000000001100000000004000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000001000101100000000000000000000000000000000000200000016000000000000000000300038130210259410000000000000000000000000000000000000000000000000000000000010000005040000001116000000000000000212000000
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.............................................................................TAATATCTATTGCCCCAGA-AAGTCTGAC........................................................................................281911.63221000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000010011320001020000000001000000000000000000000000000000000000000000000000220030000010000020002412861246780000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000
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..................................................................TATGAGGTCCTTAATATCTATTGCC.......................................................................................................251910.7420400000000000000000000000100000000000000504100102318500000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000022031300252000000000000000000000000000000000201000000000100000000000009011311301136290000000000100000000000000000000000000000000000000000000000000000005300000000712000000000000002013010000
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................................................................................TATCTATTGCCCCAGA-AAGTCTGAC........................................................................................25199.8418700000000000000000000000000000000010000000100000000010000000000000000000000000000001000000000000000000000000000000000000000000000001070100101000001000001000000000000000000000000000000000000200000000075128000001100000001171310737400000000000000000000000000000000000000000000000000000000000001000000001000000200000000000000001013000000
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.................................................CATTTAGTGATCACGGCTATGA...........................................................................................................................22188.611550000000000000000000000010000000000000000010001000101100002000000000000000000000000000000000000001000000000000000000000000000000000202200001420000100000230200000000000000000000000000000000002000000260000000010000000001100601421317180000000000000000000000000000000000000000000000000000000000001000001300000000212000000000000002300000000
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.......................................................GTGATCACGGCTATGAGGTCC......................................................................................................................21198.2115600000000000000000000000000200000000000000000000000000000000000000000000000000000000000001000000020000000204600000000000000000000000000000000000000000000000000001130300000000000000000170300000000000000000000000000001110000000000005010000000001004001001200003000000100000000000000131000000000000000000000140013000118010012000000000031030
..................................................................................................AGTCTGACTGGAAGAACATTC...........................................................................21198.2115600000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000001001000000000000000324200000000000001000000000000000020100000030000001000010000000000290000000000000113100050022000125000017000101000150070
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...................................................TTTAGTGATCACGGCTATGAG..........................................................................................................................21186.17111000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024021000000000000000031023002010000010000000000300008141000110000000100000000000000000000000002000000000000000100032008000000000000020000003107000217000011000001000110040
.....................................................TAGTGATCACGGCTATGAGG.........................................................................................................................20186.171110000000000000000000000000010000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000012000000000000133030000000020210000000010105200000001000000000000100012000000000000000000001122000000000000000100003014100016000090000000000900120
...............................................................................................A-AAGTCTGACTGGAAGAACAT.............................................................................21196.11116000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000434040009200000000000000004301000000000000000000000000033200000000000322110100000000000000000000000000000001000000000100000150000000000000000000010010001900009000010000000060
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....................................................................................................TCTGACTGGAAGAACATTCAGG........................................................................22195.741090000000000000000000000000000000000000020000010000010100000000000000000000000000000000000000000000000000000000000000000000000000000407002010410100000010000200000100000000000000000000000000030001103001253101400000070000900010000010002000000000000000000000000000000000000000010000000010000000000001101000000012000000000000000000000000
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...................................................TTTAGTGATCACGGCTATGAGG.........................................................................................................................22185.6110100000000000000000000000000100000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000070000000000000000000000000000000000000000200100000040042331000000100000010010000020100000000000000000000000000000000000000000000002402200000000000002000000200290001700004000000010021050
...........................................................................................................................AAACGAAGATGATAATGAAGC..................................................21185.339600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639100000000010020000102000000000010000000000000011190000000000000100000070060000500000000000000020060
.....................................................TAGTGATCACGGCTATGAGGTCCT.....................................................................................................................24185.0691000000000000000000000000000000000000000010000110000110000001000000000000000000000010011000000000000000000000000000000000000000000000000000000000022113100000000000000000000000000000000000002000000004011030000000130001600120801350000000000000000000000000000000000000000000000000000000000001000000301000000320000000000000000110000000
................................................................................TATCTATTGCCCCAGA-AAGTCTGACT.......................................................................................26195.0596000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000451013000000000000000121151217200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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.................................................CATTTAGTGATCACGGCTATGAGT.........................................................................................................................24184.94890000000000000000000000000000000000000010010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100113000000300500000000000000000000000000000000010001002000000001000000000000014170814160000000000000000000000000000000000000000000000000000000000000000000201000000011000000000000000110000000
........................................................TGATCACGGCTATGAGGTCCT.....................................................................................................................21194.8993000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000160000000000000000000000000000000000000000000000000000050020700000000000000019100000000000000000000200000000100101000000000000000000100000100000010000100000000000010000000103800000000000000000000000100021300006000000000020040
...........................................AACAAGCATTTAGTGATCACG..................................................................................................................................21184.89880000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000172001000000000000000000000000000000000000000003150000000100200000100020001100000000000000202000402900000000000000000000410000001000001000000000030020
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.................................TCGCAGATAGAACAAGCATTTAGTGAT......................................................................................................................................27184.7285000000000000000000000001000000000000001000001000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000006000000300000000020001609197180000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000011000000
.............................................................................TAATATCTATTGCCCCAGA-AAGTCTGA.........................................................................................27194.478500000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000001000000000000000000000000000000000000000030000000001000000000000000002000000000101181414250010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................TCCTAGTTCGCAGATAGAACAAGCATT.............................................................................................................................................27194.3282000000000000000000000000000000000000000010000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000010000000000000000000000001611401014181000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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.........................................................................................CCCCAGA-AAGTCTGACTGGAA...................................................................................21194.1679000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006210110000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000110000000000000000000000000000100000000000000000000
.......................TGTTCCTAGTTCGCAGATAGA......................................................................................................................................................21194.05770000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000030300000000000000000000000000000000000100000000000000000100000200000172000000000000000030010000000000000000000001100041380000000000000300000090050101300001000000200030020
.................................................CATTTAGTGATCACGGCTATG............................................................................................................................21184.007200000000000000000000001000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001012101000000000050000000000000000000000000000110000004000000000000000200010020603020001000000000000000000000000000000000000000000002031000000000000000100000010020000501001000001240100000
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...............................................................................................................................GAAGATGATAATGAAGCTAC...............................................20203.80760000000000000000000000000000000000020010120000001000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110202500000000000000000000000002000000010100005000000001000000000801400000000000000000000000000000000000000000000000000000000000000010002000013301010010358000000000000001200000000
...............................................................................ATATCTATTGCCCCAGA-AAGT.............................................................................................21193.747100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000006000500000000000000001420000000000000000000000000000000000000110002075000000000020010010000000010000000000000000000010270000000000000000000090020000100000000000000000000
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.................................................................................................AAGTCTGACTGGAAGAACATT............................................................................21193.58680000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000006010000000000000000000000000301000000000001074100000000000000010001000020000000000000010100100190000000000001010000010020000800007000000000110020
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............................................................................................CAGA-AAGTCTGACTGGAAGA.................................................................................20193.4265000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001020017000000000000000002003000000000000000000000000020000000001000008100000000000000000000100000000000000000000000000002100000000000000000000200000001000007000000000000000
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..................................................ATTTAGTGATCACGGCTATGA...........................................................................................................................21183.17570000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000010100000102000000000000000050000000000000000000000000000020000001011002023000000000000000000001000000000000000000000000230250000000000000001000010020000800004000000000000040
....................................................TTAGTGATCACGGCTATGAGGTCCT.....................................................................................................................25183.115600000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002101000000000000000000000000000000000000000000000000001000000019000302050301350000000000000000000000000000000000000000000000000000000000000000000000000000121000000001000002000000000
...................................................TTTAGTGATCACGGCTATGAGGT........................................................................................................................23183.065500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000002020101200110000000000000000000000000000000000000000002300000000000000000000000000000001070000100002000000000000000
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.......................TGTTCCTAGTTCGCAGATAGAAC....................................................................................................................................................23192.8955000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000272132500000000000100000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................TAATATCTATTGCCCCAGA-AAGTCT...........................................................................................25192.8454000000000000000000000000000000000000000101000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000020000000000000000000000000000000000100030000000000000000000000013018201130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
....................................CAGATAGAACAAGCATTTAGT.........................................................................................................................................21182.835100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100010000000000000000000000000000000000000177300000000010000000000000010000000000020000000130020000000000000000000010000001400001000000000020020
......................................................................................................................................ATAATGAAGCTACAAAAAACT.......................................21202.80560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000400100000000000000000000100000000000000000000000000000010000030001078100000000011000000000000000000000000000020000000390000000000000000000040000000100001000000000020020
..................................................ATTTAGTGATCACGGCTATGAGG.........................................................................................................................23182.78500000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000101110000000005001000000000000000000000000000000000000000000001007000102100000000000000020430131010000000000000000000000000000000000000000010000000000000000000000000000000221000200001000000011000000
TTAAAGG----AATCCATGCTAATG.........................................................................................................................................................................21182.6748000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000001120000000000000000000000000000001000000010100064000000000000010000000000010000000000000000000000100000000000000000000020100000100001000000000000030
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.................................TCGCAGATAGAACAAGCATTTAGTGA.......................................................................................................................................26182.5646000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000003000000000000000000000000000000000000000000000000010000000000000005014011170000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
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..............................................................................................GA-AAGTCTGACTGGAAGAACATTC...........................................................................24192.534800000000000000000000000000000000000000000100201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212000002000000000000000000000000000000000000000012000000010002000000500000000000000000000000000000000000000000000000000000000000000000000001000001300000000540000000001000001100000000
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....................................................................................TATTGCCCCAGA-AAGTCTGAC........................................................................................21192.47470000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000390000000000000000000310000000000000000000000000000000010001100102163200000000000000000001000010000000000000000002010010000000000000000000040000000100000000000000000010
......................................GATAGAACAAGCATTTAGTGATCACGGC................................................................................................................................28182.444400000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000200000030000000000000000000000000000000000000000000000000000010000000000000000000140305340000000000000000000000000000000000000000000000000000000000000000000001000000400000000000000001100000000
.............................................................................TAATATCTATTGCCCCAGA-AAGTCTG..........................................................................................26192.4246000000000000000000000010000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000004012125132000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
...............................................................................................................................GAAGATGATAATGAAGCT.................................................18202.404800000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000020000000000000000001312300000000000000000000000000000000000000000000000000000000000000000000010001621000000313000100000000001030000000
...............................................AGCATTTAGTGATCACGGCTA..............................................................................................................................21182.39430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000500200000000000000000014000000000000000000000000000000000000000000204000000000000000000000000000000000000000000200001230000000000000000000010000000500013000000000010050
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.............................................CAAGCATTTAGTGATCACGGCT...............................................................................................................................22182.224000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011300000000000000000000000000000000000000000000030000000000000000002001000000000000000000000000000000000000000000000000001100000000010000000000000001010000030000100000000001410000000
...............................GTTCGCAGATAGAACAAGCAT..............................................................................................................................................21192.214200000000000000000000000000100000000000000000000000000000000000000000000000000222200000000000000000000000000000000000000000000000000000000000000000000000002000002000000000000000000001000010000000000000000000000000000000000010000043000000010000000000000000000000000000000000000000030000000000000000000010010000100002000000000001000
..............................................................................AATATCTATTGCCCCAGA-AAGTCTGAC........................................................................................27192.214200000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000004000000000000000304145170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................TCAGGTAAACGAAGATGATAATGAAGC..................................................27180.61110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000010000000001000000100000000000000000000000000000000000000000000000000201000000200000100000000000000000000
....................................................TTAGTGATCACGGCTATGAG..........................................................................................................................20180.61110000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010120000000000000000000000010000100000000000000000000
....................................................TTAGTGATCACGGCTATGAGGTCC......................................................................................................................24180.61110000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000010000000000000000000000000001000001101000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...AAGG----AATCCATGCTAATGTT.......................................................................................................................................................................20190.58110000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000011100000010100000000000000010000000000000000000000000000000000000000000000000000010000000000000000001000000010
...........................................................................................................GGAAGAACATTCAGGTAAACGAAGA..............................................................25190.58110000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTAGTTCGCAGATAGAACAAGCATT.............................................................................................................................................25190.58110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000010103210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGTTCCTAGTTCGCAGATAGAA.....................................................................................................................................................22190.58110000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100001000400000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TATTGCCCCAGA-AAGTCTGACTGGA....................................................................................25190.58110000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100020100200000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000
.........................................................................................CCCCAGA-AAGTCTGACTGGA....................................................................................20190.581100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGCCCCAGA-AAGTCTGACTGGAAGAAC...............................................................................27190.58110000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000060000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................GACTGGAAGAACATTCAGGTA......................................................................21190.58110000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................TCCTTAATATCTATTGCCCCAGA-AAGTC............................................................................................28190.58110000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000400020000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................A-AAGTCTGACTGGAAGAACA..............................................................................20190.58110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
............................................................................TTAATATCTATTGCCCCAGA-AAGTCTGA.........................................................................................28190.58110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000030200030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGG----AATCCATGCTAATGTTCCTAG..................................................................................................................................................................25180.56100000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010411100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGG----AATCCATGCTAATGTTCC.....................................................................................................................................................................22180.56100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000400000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CATTTAGTGATCACGGCTA..............................................................................................................................19180.56100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001010000000
.........................................AGAACAAGCATTTAGTGATCA....................................................................................................................................21180.56100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000000000000000000000040000000000000002000000000000000001000000000000000
......................................GATAGAACAAGCATTTAGT.........................................................................................................................................19180.56100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005030000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTCAAAACTAGACAAAATTTG...................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000034000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................TAATGAAGCTACAAAAAACT.......................................20200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000040000000000001000000000000000000000000000000000000020000000000000000000000000000000000000000000000020
......................................................................................................................................ATAATGAAGCTACAAAAAAC........................................20200.55110000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTCAAAACTAGACAAAATTTGT..................22200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000200000000000000010300001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
........................................................................................................................................................ACTTCAAAACTAGACAAAATTTGTT.................25200.55110000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030202020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTAATGTTCCTAGTTCGCAG...........................................................................................................................................................20190.53100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000010000000000000000000000000000100002000000000000020
.........................TTCCTAGTTCGCAGATAGAACA...................................................................................................................................................22190.53100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000010000000000000000000000000000000003000000000000000000100000000000000100000000000000000010
droSim2
TGAAGAA----CATACACTCAACTGTCCCAAGAGAAGAAATAGAGCGCTGCTTCACAGACAAAGGCTTCGTTGTACTGAACATCTACTCCCCAAGG-AAGCCTGGCTGGAATAAAATCTTGGCTGGTGGAAATGACGACGAAGAAGCCATTAATGCACAAACTAGACAAAATCTGTTCTTTGTCAATC-TTAAGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAA..............................................................26374.002220002008477351020120000
.............................AAGAGAAGAAATAGAGCGCTGC...............................................................................................................................................22968.44616000100044410058211000
.............................AAGAGAAGAAATAGAGCGCTGCT..............................................................................................................................................23932.2229000010023241553201891000
.............................AAGAGAAGAAATAGAGCGCTGCTT.............................................................................................................................................24831.50252000200581142701887000
.............................AAGAGAAGAAATAGAGCGCTGCTTC............................................................................................................................................25725.8618100020009212301395000
.............................AAGAGAAGAAATAGAGCGCTGT...............................................................................................................................................22912.441120000000000001102000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGA................................................................24311.67350000001519010000000
.............................AAGAGAAGAAATAGAGCGCTG................................................................................................................................................2198.8980000000000090647000
..............................................................................................................................TGGAAATGACGACGAAGAAGCCATTAA.........................................2717.00700000000000070000
.............................AAGAGAAGAAATAGAGCGCTGCTTCA...........................................................................................................................................2676.7147000000120110420000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAGA..................................................2655.202600000077021090000
.............................AAGAGAAGAAATAGAGCGCTGCTTT............................................................................................................................................2585.1341000000000000383000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGAA....................................................2654.6023000000011010200000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAGA..................................................2554.402200000095210050000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAA...............................................................2534.331300000031530010000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAATG............................................................2834.001200000044400000000
.............................AAGAGAAGAAATAGAGCGCTGCTTAT...........................................................................................................................................2684.0032000000000000320000
.............................................................................GAACATCTACTCCCCAAGG-AAGCC............................................................................................24143.71520007110101032000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGA.....................................................2553.4017000000000000161000
....................................................................................................................................TGACGACGAAGAAGCCATTAATGCA.....................................2513.00300000000021000000
......................................................ACAGACAAAGGCTTCGTTGTACT.....................................................................................................................23102.9029000000810812000000
.............................AAGAGAAGAAATAGAGCGCTGCTTA............................................................................................................................................2582.8823000000000000221000
.........................................................................TACTGAACATCTACTCCCCAAGG-AAGCC............................................................................................28102.8028001000521010162000
........................................TAGAGCGCTGCTTCACAGACAAAGGC................................................................................................................................2662.671600000045421000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGAC..........................................................2532.67800110023010000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACGA........................................................2732.67800000001010060000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAGCCA.............................................2652.6013000100000020100000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAGAA.................................................2652.601300000036110020000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAGAA.................................................2752.601300000034100050000
.............................AAGAGAAGAAATAGAGCGCTGCTTCAC..........................................................................................................................................2772.5718000000000010170000
.............................AAGAGAAGAAATAGAGCGCTGCTTTT...........................................................................................................................................2682.3819000000000000190000
.............................AAGAGAAGAAATAGAGCGCTGCTA.............................................................................................................................................2492.3321000000000100200000
.............................AAGAGAAGAAATAGAGCGCTGCTAT............................................................................................................................................2592.3321000000000000210000
.............................AAGAGAAGAAATAGAGCGCT.................................................................................................................................................20102.2022000000000215032000
..............................................................................................................................TGGAAATGACGACGAAGAAGCCATT...........................................2572.141500000045105000000
....................................................................................................................................TGACGACGAAGAAGCCATTAAT........................................2212.00200000000000020000
.............................AAGAGAAGAAATAGAGCGCTGCTAA............................................................................................................................................2592.0018000000000000180000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAAT.............................................................2732.00600000013110000000
...................................................TTCACAGACAAAGGCTTCGTTGTACT.....................................................................................................................26102.002000010098110000000
.............................................................................GAACATCTACTCCCCAAGG-AAGCCT...........................................................................................25142.0028002200001023000000
..........................CCCAAGAGAAGAAATAGAGCGCTGC...............................................................................................................................................2591.7816000000001000132000
............................................................................TGAACATCTACTCCCCAAGG-AAGCCTGGC........................................................................................2991.671500000055401000000
.............................AAGAGAAGAAATAGAGC....................................................................................................................................................17111.6418000000000018000000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAG...................................................2551.60800000014000030000
.............................AAGAGAAGAAATAGAGCGCTGCTTCACA.........................................................................................................................................2871.4310000000000000100000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAA....................................................2451.40700000003010030000
TGAAGAA----CATACACTCAACTGTCCCAAGA.................................................................................................................................................................29101.401400000045410000000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAGCC..............................................2551.40700000000100060000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAATGAC..........................................................3031.33400000022000000000
.............................................................AAGGCTTCGTTGTACTGAACATCTAC...........................................................................................................26101.301300000034222000000
.............................AAGAGAAGAAATAGAGCGCTGCTTCT...........................................................................................................................................2671.29900000000000090000
.............................................................................GAACATCTACTCCCCAAGG-AAGCCTG..........................................................................................26141.2918000100020015000000
..........................................................................................................................................................GCACAAACTAGACAAAATCTGTTCT...............2551.20600000011300010000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAG...................................................2451.20600000002000040000
..............................................................................................................................................................AAACTAGACAAAATCTGTTCTTTGT...........2561.17700030000004000000
..............................................................................................................................................................AAACTAGACAAAATCTGTTC................2071.14800008000000000000
.............................................................................GAACATCTACTCCCCAAGG-AAGCCTGGC........................................................................................2891.111000030022012000000
....................................................................................................................................TGACGACGAAGAAGCCATTAATGCAA....................................2611.00100000001000000000
.............................................................................GAACATCTACTCCCCAAGG-AAGC.............................................................................................23141.001400030020018000000
....................................................................................................................................TGACGACGAAGAAGCCATTAATGC......................................2411.00100000000001000000
....................................................................................................................................TGACGACGAAGAAGCCATTAA.........................................2111.00100000000000010000
....................................................................................................................................TGACGACGAAGAAGCCATTAAAA.......................................2311.00100000001000000000
....................................................................................................................................TGACGACGAAGAAGCCATTAATGA......................................2411.00100000000010000000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAGCCAT............................................2751.00500000000002030000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACG......................................................2451.00500000000000050000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGG.................................................................2331.00300000021000000000
....................................................................................................................................TGACGACGAAGAAGCCATTAATGCAC....................................2611.00100010000000000000
.........................................................................................................CTGGAATAAAATCTTGGCTGGTGGAAA..............................................................2731.00300000001110000000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAGAAG................................................2851.00500000032000000000
.......................TGTCCCAAGAGAAGAAATAGAGCGCTG................................................................................................................................................2781.00800000000100061000
....................................................................................................................................TGACGACGAAGAAGCCATTAATA.......................................2311.00100000000000010000
.........................................................................TACTGAACATCTACTCCCCAAGG-AAGC.............................................................................................27100.90900000000101070000
.........................TCCCAAGAGAAGAAATAGAGCGCTGC...............................................................................................................................................2690.89800000000001025000
............................................................................TGAACATCTACTCCCCAAGG-AAGCCTGG.........................................................................................2890.89800000025100000000
.............................................................................GAACATCTACTCCCCAAGG-AAGCCTGG.........................................................................................2790.89800020031002000000
.......................TGTCCCAAGAGAAGAAATAGAGCGCTGC...............................................................................................................................................2880.88700000000001051000
..............................................................................................................................TGGAAATGACGACGAAGAAGCCATTA..........................................2670.86600000030102000000
...........................................AGCGCTGCTTCACAGACAAAG..................................................................................................................................2170.86600006000000000000
.............................................................................GAACATCTACTCCCCAAGG-A................................................................................................20140.8612000011000100000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGAAA...................................................2750.80400000000000031000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAGAAGC...............................................2850.80400000010300000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGAC.......................................................2350.80400000000000040000
.............................AAGAGAAGAAATAGAGCGCTGCA..............................................................................................................................................2390.78700000000101050000
..............................................................................................................................................................AAACTAGACAAAATC.....................15110.73800000000008000000
..............................................................................................................................TGGAAATGACGACGAAGAAGCCAT............................................2470.71500000000200030000
TGAAGAA----CATACACTCAACTGTCCC.....................................................................................................................................................................25100.70700020003100010000
.........................................................GACAAAGGCTTCGTTGTACTGAACA................................................................................................................25100.70700000011140000000
.............................AAGAGAAGAAATAGAGCGC..................................................................................................................................................19100.70700000000015010000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACGAC.......................................................2830.67200000010000010000
..........................CCCAAGAGAAGAAATAGAGCGCTG................................................................................................................................................2490.67600000000010050000
...................................................................................................................ATCTTGGCTGGTGGAAATGACGACGAA....................................................2730.67200000000000020000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACGACA......................................................2930.67200000020000000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATG............................................................2330.67200000002000000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGAAG...................................................2750.60300000000000021000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAGC...............................................2450.60300000021000000000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAGAAG................................................2750.60300000021000000000
...........................................................................................................................TGGTGGAAATGACGACGAAGA..................................................2150.60300000011000010000
.............................AAGAGAAGAAATAGAGCGCTGCTTCAA..........................................................................................................................................2770.57400000000000040000
.............................AAGAGAAGAAATAGAGCGCTGA...............................................................................................................................................2290.56500000000000032000
.............................................................AAGGCTTCGTTGTACTGAACATCTA............................................................................................................25100.50500000013010000000
.............................AAGAGAAGAAATAGAGCGCTGCTTTTA..........................................................................................................................................2780.50400000000000022000
............................................................................................AAGG-AAGCCTGGCTGGAATAAAATCT...........................................................................2640.50200000000000020000
............................................................................................AAGG-AAGCCTGGCTGGAATAAAATC............................................................................2540.50200000000000020000
.........................................................................................CCCAAGG-AAGCCTGGCTGGAATAAAATCT...........................................................................2920.50100000010000000000
.......................................................................TGTACTGAACATCTACTCCCCAAGG-AAGCC............................................................................................30100.50500000031000010000
.......................................................................................TCCCCAAGG-AAGCCTGGCTGGAATAA................................................................................2620.50100000000000010000
......................................................ACAGACAAAGGCTTCGTTGTACTGA...................................................................................................................25100.50500000001021010000
.............................AAGAGAAGAAATAGAGCGCTGCAA.............................................................................................................................................2490.44400000000000040000
.............................AAGAGAAGAAATAGAGCGCTGTA..............................................................................................................................................2390.44400000000000040000
.............................AAGAGAAGAAATAGAGCGCTGCTTCAT..........................................................................................................................................2770.43300000000000030000
TGAAGAA----CATACACTCAACTGTC.......................................................................................................................................................................23100.40400000000012010000
..........................................................................................................................................................GCACAAACTAGACAAAATCTGTTCC...............2550.40200000000000020000
.........................................................GACAAAGGCTTCGTTGTACTGAACATC..............................................................................................................27100.40400000020110000000
....................................................TCACAGACAAAGGCTTCGTTGTACT.....................................................................................................................25100.40400000022000000000
............................................................AAAGGCTTCGTTGTACTGAACATCTAC...........................................................................................................27100.40400000002200000000
TGAAGAA----CATACACTCAACTGTCC......................................................................................................................................................................24100.40400000000004000000
..........................................................................................................................................................GCACAAACTAGACAAAATCTGTTCTAC.............2750.40200000000000020000
..........................................................................................................................................................GCACAAACTAGACAAAATCTGTTCTT..............2650.40200010000001000000
.............................AAGAGAAGAAATAGAGCGCTGTAA.............................................................................................................................................24100.40400000000000040000
...AGAA----CATACACTCAACTGTCCCAAGAGA...............................................................................................................................................................28100.40400000020200000000
...................................................TTCACAGACAAAGGCTTCGTTGTA.......................................................................................................................24100.40400000011020000000
......................................................................................................................TTGGCTGGTGGAAATGACGACG......................................................2250.40200000000000011000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAA...................................................2450.40200000000000020000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAGAAGC...............................................2950.40200000000100001000
.......................................................................TGTACTGAACATCTACTCCCCAAGG-AAGC.............................................................................................29100.40400000012000001000
.................................GAAGAAATAGAGCGCTGCTT.............................................................................................................................................2080.38300000000003000000
.............................AAGAGAAGAAATAGAGCG...................................................................................................................................................18110.36400000000004000000
TGAAGAA----CATACACTCAACTGT........................................................................................................................................................................22110.36400000002101000000
................................................................................................................AAAATCTTGGCTGGTGGAAATGACGAC.......................................................2730.33100000001000000000
.....................................................................................................................................GACGACGAAGAAGCCATTAATGCAC....................................2530.33100000000001000000
................................................................................CATCTACTCCCCAAGG-AAGCCTGGC........................................................................................2590.33300000011100000000
..............................................................................................................ATAAAATCTTGGCTGGTGGAAATGAC..........................................................2630.33100000001000000000
.........................................................................................................CTGGAATAAAATCTTGGCTGGTGGAA...............................................................2630.33100000010000000000
..............................................................................................................................................................AAACTAGACAAAATCTGTTCTTTGTC..........2630.33100000000001000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACA.........................................................2630.33100000000000010000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAT..............................................................2630.33100000010000000000
...................................................................................................................ATCTTGGCTGGTGGAAATGACGA........................................................2330.33100000000000010000
......................................................................................................TGGCTGGAATAAAATCTTGGCTGG....................................................................2430.33100000000001000000
.............................................................................................................................................AGAAGCCATTAATGCAC....................................1730.33100000000001000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACG.........................................................2630.33100000000000010000
...................................................TTCACAGACAAAGGCTTCGTT..........................................................................................................................21120.33400000001102000000
..........................................................................................................TGGAATAAAATCTTGGCTGG....................................................................2030.33100000010000000000
.............................AAGAGAAGAAATAGAGCGCTGAC..............................................................................................................................................2390.33300000000000021000
.....................................................................................................................................GACGACGAAGAAGCCATTAATGCACAA..................................2730.33100000000000010000
.................................................................................................................AAATCTTGGCTGGTGGAAATG............................................................2130.33100000000100000000
.............................AAGAGAAGAAATAGAGCGCTGCTGT............................................................................................................................................2590.33300000000000030000
...........................................................................................................GGAATAAAATCTTGGCTGGTGGAAATGA...........................................................2830.33100000010000000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAA..............................................................2130.33100000001000000000
.........................................................................................................CTGGAATAAAATCTTGGCTGGTGGAAATGA...........................................................3030.33100000001000000000
.............................................................................................................AATAAAATCTTGGCTGGTGGAAATGAC..........................................................2730.33100000001000000000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAATGA...........................................................2930.33100000000100000000
...................................................................................................................ATCTTGGCTGGTGGAAATGACGACGA.....................................................2630.33100000000000010000
.............................AAGAGAAGAAATAGAGCGCTGG...............................................................................................................................................2290.33300000000000030000
.........................................................................................................CTGGAATAAAATCTTGGCTGGTGGA................................................................2530.33100000001000000000
..........................CCCAAGAGAAGAAATAGAGCGCTGCT..............................................................................................................................................2690.33300000020000010000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACGACGA.....................................................3030.33100000010000000000
...........................CCAAGAGAAGAAATAGAGCGCTG................................................................................................................................................2390.33300000000000030000
.....................................................................................................................................................TTAATGCACAAACTAGACAAAATC.....................2430.33100000000100000000
.............................AAGAGAAGAAATAGA......................................................................................................................................................15130.31400000000004000000
.....................................................CACAGACAAAGGCTTCGTTGTACT.....................................................................................................................24100.30300000021000000000
................................................TGCTTCACAGACAAAGGCTTCGTTGTACT.....................................................................................................................29100.30300000021000000000
.............................................................AAGGCTTCGTTGTACTGAACATCT.............................................................................................................24100.30300000000210000000
.GAAGAA----CATACACTCAACTGTCCCAAGA.................................................................................................................................................................28100.30300000030000000000
..............................................................AGGCTTCGTTGTACTGAACATCTAC...........................................................................................................25100.30300000010110000000
...................................................TTCACAGACAAAGGCTTCGTTGTAC......................................................................................................................25100.30300000020000010000
......................................................ACAGACAAAGGCTTCGTTGTACTGAA..................................................................................................................26100.30300000010101000000
....................................................................................TACTCCCCAAGG-AAGCCTGGCTGGAA...................................................................................26100.30300000001101000000
.............................................................AAGGCTTCGTTGTACT.....................................................................................................................16100.30300000020001000000
...............................................................GGCTTCGTTGTACTGAACATCTACT..........................................................................................................25100.30300000001200000000
................................AGAAGAAATAGAGCGCTGCTTCA...........................................................................................................................................2370.29200000000000020000
..........................................................................ACTGAACATCTACTCCCCAAGG-AAGCC............................................................................................27110.27300000000000030000
.......................................................................................................................................................AATGCACAAACTAGACAAAATCTGT..................2540.25100000010000000000
......................................................................................................TGGCTGGAATAAAATCTTGGCTG.....................................................................2340.25100000000001000000
............................................................................................AAGG-AAGCCTGGCTGGAATAAAATAAA..........................................................................2740.25100000000000010000
............................................................................................AAGG-AAGCCTGGCTGGAATAAAAT.............................................................................2440.25100000000000010000
..................................................................TTCGTTGTACTGAACATCTACTCCC.......................................................................................................2580.25200010000001000000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGACGAA.......................................................2840.25100000000000010000
.............................................................................................AGG-AAGCCTGGCTGGAATAAAAAA............................................................................2440.25100000000000010000
.............................................................................................AGG-AAGCCTGGCTGGAATAAAATCT...........................................................................2540.25100000001000000000
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAC..............................................................2640.25100000001000000000
..........................CCCAAGAGAAGAAATAGAGCGCTGCAAA............................................................................................................................................2890.22200000000000020000
..............................AGAGAAGAAATAGAGCGCTGCT..............................................................................................................................................2290.22200000020000000000
.......................TGTCCCAAGAGAAGAAATAGAGCGCT.................................................................................................................................................2690.22200000020000000000
....................AACTGTCCCAAGAGAAGAAATAGAGCGC..................................................................................................................................................2890.22200000000000020000
..........................CCCAAGAGAAGAAATAGAGCGCTGCA..............................................................................................................................................2690.22200000000000020000
.............................AAGAGAAGAAATAGAGCGCTGCTAAT...........................................................................................................................................2690.22200000000000020000
.........................TCCCAAGAGAAGAAATAGAGCGCTGCA..............................................................................................................................................2790.22200000000000020000
............................................................................TGAACATCTACTCCCCAAGG-AAGCC............................................................................................25140.21300010000011000000
.............................................................................GAACATCTACTCCCCAAGG-AAG..............................................................................................22140.21300000010011000000
............................................................................TGAACATCTACTCCCCAAGG-AAGCCT...........................................................................................26140.21300000012000000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGAAGA..................................................2850.20100000010000000000
.....................................................................................................................CTTGGCTGGTGGAAATGAC..........................................................1950.20100000000001000000
.....................................................................................................................CTTGGCTGGTGGAAATGACGACGA.....................................................2450.20100000000000010000
...........................................................................................................................TGGTGGAAATGACGACGAAGAA.................................................2250.20100000001000000000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAG................................................2350.20100000000100000000
.........................................................................TACTGAACATCTACTCCCCAAGG-A................................................................................................24100.20200100001000000000
..........................................................................................................................CTGGTGGAAATGACGACGAAGAAGC...............................................2550.20100000000000010000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAA....................................................2350.20100000000000010000
TGAAGAA----CATACACTCAACTGTCTT.....................................................................................................................................................................25100.20200000000101000000
......................................................ACAGACAAAGGCTTCGTTGTAAAA....................................................................................................................24100.20200000011000000000
.......................................................................TGTACTGAACATCTACTCCCCAAGG-AAG..............................................................................................28100.20200000000100010000
.............................AAGAGAAGAAATAGAGCGCTGCAAT............................................................................................................................................25100.20200000000000020000
...................................................TTCACAGACAAAGGCTTCGTTGTACTGA...................................................................................................................28100.20200000002000000000
.....................................................................................................................CTTGGCTGGTGGAAATGACGACGAA....................................................2550.20100000001000000000
..........................................................................................................................CTGGTGGAAATGACGACGA.....................................................1950.20100000010000000000
.......................................................................................................................TGGCTGGTGGAAATGACGACG......................................................2150.20100000000001000000
...........................................................................................................................TGGTGGAAATGACGACGAAGAAGCA..............................................2550.20100000000000010000
............................................................AAAGGCTTCGTTGTACTGAACATCTA............................................................................................................26100.20200000001100000000
.GAAGAA----CATACACTCAACTGTCCCAAGAGA...............................................................................................................................................................30100.20200000010100000000
............................................................................................................................GGTGGAAATGACGACGAAG...................................................1950.20100000000001000000
....GAA----CATACACTCAACTGTCCCAAGAGAA..............................................................................................................................................................28100.20200000020000000000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAGT..................................................2650.20100000000000010000
..........................................................................................................................................................GCACAAACTAGACAAAATCTGTTC................2450.20100000010000000000
............................................................AAAGGCTTCGTTGTACTGAACATC..............................................................................................................24100.20200000000200000000
..........................................................................................................................CTGGTGGAAATGACGACGAAGAAGCC..............................................2650.20100000000100000000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGAT....................................................2650.20100000000000010000
....................................................................................................................TCTTGGCTGGTGGAAATGACGACGACA...................................................2750.20100000000000010000
......................................................................................................................TTGGCTGGTGGAAATGACGACGAAA...................................................2550.20100000000000010000
....GAA----CATACACTCAACTGTCCCAAGAGA...............................................................................................................................................................27100.20200000010010000000
...........................................................................................................................................................CACAAACTAGACAAAATCTGTTCTT..............2550.20100000000000010000
..........................................................................................................................CTGGTGGAAATGACGACGAAGA..................................................2250.20100000000000010000
.......................................................CAGACAAAGGCTTCGTTGTACTGA...................................................................................................................24100.20200000000000020000
......................................................................TTGTACTGAACATCTACTCCCCAAGG-A................................................................................................27100.20200000011000000000
TGAAGAA----CATACACTCAACTGTCCCA....................................................................................................................................................................26100.20200000020000000000
....................................................................................TACTCCCCAAGG-AAGCCTGGC........................................................................................21110.18200000001001000000
..................TCAACTGTCCCAAGAGAAGAAATAGA......................................................................................................................................................26110.18200000011000000000
..............................................................................................................................................................AAACTAGACAAAATCT....................16110.18200000000002000000
......................................................ACAGACAAAGGCTTCGTT..........................................................................................................................18120.17200000000002000000
........................................TAGAGCGCTGCTTCACAGACAAA...................................................................................................................................2360.17100000000001000000
.................CTCAACTGTCCCAAGAGAAGA............................................................................................................................................................21120.17200000010100000000
.............TACACTCAACTGTCCCAAGAGAAGA............................................................................................................................................................25120.17200000000020000000
......................................AATAGAGCGCTGCTTCACAGACAAAG..................................................................................................................................2660.17100000000001000000
..................................................................................................................AATCTTGGCTGGTGGAAA..............................................................1860.17100000001000000000
..........................CCCAAGAGAAGAAATAGAGCGCTGCTTCA...........................................................................................................................................2970.14100000000000010000
..............................................................................................................................TGGAAATGACGACGAAGAAGC...............................................2170.14100000000001000000
..........................CCCAAGAGAAGAAATAGAGCGCTGCTTC............................................................................................................................................2870.14100000000000010000
..............................AGAGAAGAAATAGAGCGCTGCTTCA...........................................................................................................................................2570.14100000010000000000
droSec2
TGAAAAA----CATACACTCAACTGTCCCAAAAGAAGAAATAGAGCGCTGCTTCACAGACAAAGTCTTCGTTGTACTGAACATCTACTCCCCAAGG-AATCCTGGCTGGAATAAAATCTTGGCTGGTGGAAATGACGACGAAGAAGTCATTATCGCACAAACTAGACAAAATCTGTTCTTTGTAAATC-TTAAGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.....................................AAATAGAGCGCTGCTTCACAGACAAAGT.................................................................................................................................2811.0010100
.........................................................................TACTGAACATCTACTCCCCAAGG-A................................................................................................24200.4088000
.........................................................................TACTGAACATCTACTCCCCAAGG-.................................................................................................23200.2044000
......................................................................................................TGGCTGGAATAAAATCTTGGCTGG....................................................................24150.1322000
.....................................................................................................................CTTGGCTGGTGGAAATGACGACGAAGA..................................................27150.0710010
..........................................................................................................TGGAATAAAATCTTGGCTGGTGGAAA..............................................................26150.0711000
.......................................................................................................................TGGCTGGTGGAAATGACGACGAAGA..................................................25150.0711000
...............................................................................................................TAAAATCTTGGCTGGTGGAAATGA...........................................................24160.0611000
.........................................................................TACTGAACATCTACTCCCCAAG...................................................................................................22200.0511000
..........................................................................ACTGAACATCTACTCCCCAAGG-AC...............................................................................................24200.0511000
..........................................................................ACTGAACATCTACTCCCCAAGG-.................................................................................................22200.0511000
..........................................................................ACTGAACATCTACTCCCCAAGG-AA...............................................................................................24200.0511000
.........................................................................TACTGAACATCTACTCCCCAAGG-AT...............................................................................................25200.0510001
droYak3
TTAAAAA----CATTCACTCCACTGTTCCTAAAGAATTAATTGAGCGAGCTTTCTCTGAAAAGGGTTTCTGTGTTCTCAACACTTACTGCCCGAGG-AGACCTGATTGGCGAGAAATTCCAATTGAAGATGGATCTGACGAGCAAGCAGTCAATGCTAAAACTAGACAA-ATCTATTTTATGTCAATCCTCACGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................TCTGTGTTCTCAACACTTACTGCCCGA....................................................................................................2762.1713000000000013
....................................................................................................................TTCCAATTGAAGATGGATCTGACGAGCA..................................................2820.50101000000000
.........................................................................................................TTGGCGAGAAATTCCAATTGAAGAT................................................................2520.50100100000000
....................................................................................TACTGCCCGAGG-AGACCTGATTGGC....................................................................................2550.40201010000000
..............................AAAGAATTAATTGAGCGAGCTTTC............................................................................................................................................2460.33202000000000
.TAAAAA----CATTCACTCCACTGTTCC.....................................................................................................................................................................2470.29201100000000
.............................TAAAGAATTAATTGAGCGAGCT...............................................................................................................................................2260.17101000000000
............................................................AAGGGTTTCTGTGTTCTCAACAC...............................................................................................................2360.17100100000000
.....................................................................TGTGTTCTCAACACTTACTGCCCGAGG-A................................................................................................2860.17100100000000
.............................TAAAGAATTAATTGAGCGAGCTTTCTC..........................................................................................................................................2760.17101000000000
...................................................................TCTGTGTTCTCAACACTTACTGCCCG.....................................................................................................2660.17101000000000
.................................................................................................................................TGGATCTGACGAGCAAGCAGTCAATGCTA....................................2960.17100000000001
...................................................................TCTGTGTTCTCAACACTTACTGCCCGAG...................................................................................................2860.17101000000000
.....................................................................TGTGTTCTCAACACTTACTGCCCGA....................................................................................................2560.17101000000000
...................................................................TCTGTGTTCTCAACACTTACTGCCC......................................................................................................2560.17100100000000
............................................................................TCAACACTTACTGCCCGAGG-AGACCTG..........................................................................................2760.17101000000000
.............................TAAAGAATTAATTGAGCGAGCTTT.............................................................................................................................................2460.17100100000000
........................................................TGAAAAGGGTTTCTGTGTTCTCAACACT..............................................................................................................2860.17101000000000
.................................................................TTTCTGTGTTCTCAACACTTACTGCCC......................................................................................................2760.17100100000000
..............................AAAGAATTAATTGAGCGAGCTTTCTC..........................................................................................................................................2660.17101000000000
.........................TTCCTAAAGAATTAATTGAGCGAGCC...............................................................................................................................................2670.14100100000000
droEre2
TCAAGGG----AATGCATGCAAGTGTTCCCAAGGAACAAATTAAGAATGCATTTGCTGATCTTGGTTACGAAACTCTCAACATATATTGTCCGAGA-AAAGGAGACTGGCAGAACGAACAAATCTGTGATGGGGATGACGAAGCGGCTATCAACCACAAGACCAGACAAAACCTGTTCTTCGTTAATC-TAAAASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
....................................CAAATTAAGAATGCATTTGCT.........................................................................................................................................2120.5010000100

Generated: 05/15/2015 at 02:38 PM