ID:

dmo_1641

 Coordinate:

scaffold_6500:25540813-25540963 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8 -21.6 -21.5 -21.5

Flybase annnotation

exon [dmoj_GLEANR_625:5]; CDS [Dmoj\GI21377-cds]; intron [Dmoj\GI21377-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCAGACAAAAGCTGGCATTGCCTTCTCTCAATGGGCTGCCAGACTCCAGGGCGGAGCACAGTAACGCAGCTTGCCTGGAAATCTGCTAAACTGTTCTATTTGAGGTACAGCTTTGAATAGACACTCGGTGCAGGCTTACACTCTCCCACTCCATGTCTGTTCAGCTAGACTAATCACGCCCTCTTCTATCGCCCACACAGTGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGCAATTGGCAGC
*****************************************************((.............((((((((((..............((.((((((((((((...))))))))))))))..))).))))))).....))*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 V056
head
 M060
embryo
.....................................................GGAGCACAGTAACGCAGCTTGCCT.............................................................................................................................................................................. 24 0 1 10.00 10 7 3 0 0 0
....................................................CGGAGCACAGTAACGCAGCTTGCCT.............................................................................................................................................................................. 25 0 1 4.00 4 3 1 0 0 0
.......................................................................................................................AGACACTCGGTGCAGGCTTACACTC........................................................................................................... 25 0 1 4.00 4 3 1 0 0 0
....................................................CGGAGCACAGTAACGCAGCTTGCC............................................................................................................................................................................... 24 0 1 4.00 4 0 4 0 0 0
....................................................CGGAGCACAGTAACGCAGCTTGCCTG............................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0
.....................................................GGAGCACAGTAACGCAGCTTGCCTG............................................................................................................................................................................. 25 0 1 3.00 3 1 2 0 0 0
.........................................................................................................................ACACTCGGTGCAGGCTTACACTC........................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
.....................................................GGAGCACAGTAACGCAGCTTGCC............................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0
.....................................................GGAGCACAGTAACGCAGCTTGCCTGG............................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................CGGTGCAGGCTTACACTC........................................................................................................... 18 0 1 2.00 2 2 0 0 0 0
......................................................................................................................TAGACACTCGGTGCAGGCTTACACTC........................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
.............................................................................................................................................................................................................................GTCCGCTCTGCACGCAGC............ 18 0 1 1.00 1 1 0 0 0 0
....................................................CGGAGCACAGTAACGCAGC.................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...................................................GCGGAGCACAGTAACGCAGCTCGCC............................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0
...................................................................................................TGTGAGGTACAGCGTTGATTA................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0
.....................................................GGAGCACAGTACCGCAGCTTGCCT.............................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0
...........GCTGGCATTGCCTTCTCTCAATGGGCT..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................................GGAGCACAGTAACGCAGCTTGCCTGGA........................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................CCTTCTCTCAATGGGCTGCC.................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.....................................................GGAGCACGGTAACGCAGCTTGCCT.............................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0
...................................................GCGGAGCACAGTAACGCAGCTTGCCTGG............................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0
..................................................................................................ATTTGAGGTACAGCTTTGAAT.................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
......................................................GAGCACAGTAACGCAGCTTGCCTGG............................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
....................................................CGGAGCACAGTAACGCAGCTTGCCTGGA........................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................TGTCCGCTCTGCACGCAGCGCA......... 22 0 1 1.00 1 1 0 0 0 0
.....................................................GGAGCACAGTAACGCAGCTTGCCTGGAA.......................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................CACGCAGCGCAATTGGCAGC 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................AGACACTCGGTGCAGGATTACACTC........................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................GTTCTATTTGAGGTACAGCTTTGAAT.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGC.......... 20 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGCAAT....... 23 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................GCAAGTGAGGTCGGCCGGCT................................... 20 3 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................................AGACTAATCACTCTCACTTC................................................................ 20 3 4 0.25 1 0 0 0 0 1
....................................................................................................................................................................................................GCAAGTGAGGTCGGCCGGC.................................... 19 3 14 0.07 1 1 0 0 0 0

Anti-sense strand reads

CGGTCTGTTTTCGACCGTAACGGAAGAGAGTTACCCGACGGTCTGAGGTCCCGCCTCGTGTCATTGCGTCGAACGGACCTTTAGACGATTTGACAAGATAAACTCCATGTCGAAACTTATCTGTGAGCCACGTCCGAATGTGAGAGGGTGAGGTACAGACAAGTCGATCTGATTAGTGCGGGAGAAGATAGCGGGTGTGTCACTCCAGCCGGCCGATTGCACAGGCGAGACGTGCGTCGCGTTAACCGTCG
***********************************************************************************************************((.............((((((((((..............((.((((((((((((...))))))))))))))..))).))))))).....))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 M046
female body
.................................................................................................................................................................................................................CGGTCGATTGCGCAGGCGAT...................... 20 3 4 0.25 1 1 0
......................................CGGCATGAGGTCCCGCCT................................................................................................................................................................................................... 18 2 7 0.14 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:25540763-25541013 - dmo_1641 GCCAGACAAAAGCTGGCATTGCCTTCTCTCAATGG-------GCTGCCAGACTCCAG-GGCGGAGCACAGTAACGC------AGCT-----TGCCTGGAAATCTG----CTAAACTGTTCTAT-------TT-G----AGGTACAGCTTT---GAATA-GAC-ACT--CGGTGC--------AGGC---------------T-TACACTCT-----------------------------------------------------------------------CCCAC--------------TCC------------------------------ATGTCTGTTCAG----------------------------------------------------------CTAG---ACTAATCACGC-------CCTCTTC----------------------------TATCGCCCA-C-------ACAGTGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGCAATTGGCAGC
droVir3 scaffold_12963:6396292-6396562 - dvi_10636 ACCAGACAAAAGCTGGCAGTACCTCTTCTCAATAG-------GCTGCCAGTCTCCAGGGGTGGAGCACAGCGAGCAGCTTGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCTG-----TTCAAAGTCGC-GCCAAAG--AC-TTTGCTCGGATC-CAGC--AAGC---------------T-TACATAA----------C------------------------------------------TAC----------CTAATAAACGTTCCAGTTAATGTTTAA---------------------------------AAT---------------------------------------------------------------------ATTTCTAA--C-CG-------TTTTC------------TTTATT--------------TA-TCCCTTCTATAAAACAGTGAGGTCGGCCGCCTAACGTGTCCGCTCTGCACGCAACGCAATTGGCAGC
droGri2 scaffold_15252:9624100-9624351 - GTCAAACAAAAGCTGGCAGCTCTTG-ATTTTATTG-------GCCGCCAGTCTCCAG-GGCGGAGCACAGTAAACACTTGG-AGCT-----TGC---------------C-TG----------------------------------------------------TGGCAATGC-------TGATTCGACTTTTAACCGGTC-AGCAA------------CATGCAACAGC--------------CTTGCAAGTTTACATTCCTAGTTGGCATTTT--------------------TATATGGT------------------------------A-----------------------------------------------------------------------TACTTTCTAATTA-TC-------GAAC-------------------------------TTTGTCTGTCT-------ATAGTGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGC
droWil2 scf2_1100000004585:1077844-1078101 - ACTAGACAAAAGCTGTTGGA---A---TCCTATTTGTTTTGATCCAACAGACTCCAG-GGTGGAGCACAGCAAATGATACAAAGCT--ACCGG-----AAGATTGATATT-CAACTGTATGA----------TGTTTGTCTCACGGCT------------------------------GCGAATGC---------------T-AACAACGAAA-------------ATAATCTATAATATTTGT------------AAATTCCTA---------------------------------------------------------------------------A---------------------------------------------------------------T-------TTAATTAA--AATTTATC--TT------------TTTATT------------T-ATAAT-TTT-------GCAGCGAGGTCGGCCGCCTAACCTGTCCGCTCTGCACGCAACGTAATTGGCAAC
dp5 4_group3:2689085-2689342 - ACTAGACAAAAGCTGGCAGATGCT--ACCCAAATG-------ACTGCCAGACTCCAA-GGTGGAGCACAGCAAAAGAGGGAGAACT--ATG--------------ATACT-CAA--------GCGGCAG--CTG-----CTTAAAGCCAA-ATTAAAG-CTATTTTGATATGGCC-CAGCTTGTGC---------------T-AACAATTAGA----------------------------------------------------------------TCGTACTCATCT------------GCT--------------------------------GA--A---------------------------------------------------------------TTCAAATACTAATAT-CT-------TTTTCTT----------------------------TTTGTCT-TCC-------TTAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGC
droPer2 scaffold_1:4179907-4180164 - ACTAGACAAAAGCTGGCAGATGCT--ACCCAAATG-------ACTGCCAGACTCCAA-GGTGGAGCACAGCAAAAGAGGGAGAACT--ATG--------------ATACT-CAA--------GCGGCAG--CTG-----CTTAAAGCCAA-ATTAAAG-CTATTTTGATATGGCC-CAGATTGTGC---------------T-AACAATTAGA----------------------------------------------------------------TCGTACTCATCT------------GCT--------------------------------GA--A---------------------------------------------------------------TTCAAATACTAATAT-CT-------TTTTCTT----------------------------TTTGTCT-TCC-------TTAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGC
droAna3 scaffold_12916:9962589-9962871 - ACTAGACAAAAACTGGCAGCGGAT---GACCAATG-------GCCGCCAGACTCCAG-GGTGGAGCACAGCAAGAGATGTGGATCT--TCACGC---------------T-CAA-AGTCTAAGCTGCTG--CTT-----TTTTAAGACTC-GTCTAAG-AAA-TTTGACAAGAA--CAGCTTAAGC---------------TTAACAATTA-A---------------------------------------------------------------TT----CTCACAC--------------T------------------------------AAGATT-------------------GGTTGCGG-------------------------------------TTTAATTACTAGTTA-AT-------ACACCCTTATTAATTAA---ATTCTTT--------T-TTAAA-CTT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGTAATTGGCAGC
droBip1 scf7180000396580:1065618-1065897 + ACTAGACAAAAGCTGGTAGCGGAT---TTCCAATG-------GCTGCCAGACTCCAG-GATGGAGCACAGCAAGAGGTGTGGAGCT--TCATGC---------------C-CAA-AGTCTAAGCTGCTG--CTG-----CTTCAATACTT-GTCAAAG-ATA-TTTGACAAACA--CAGCTTAAGC---------------TTAACAAATA--------------------------------------------------------------------CTTATCATACTAAGAG--------------------------------------------T-------------------GGTTGTGG-------------------------------------TGCAGTTACTAGCTT-AT----C--AGTTCCTTACTAATTAA---CT----T--------T-TTAAT-CTT-------TCAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGTAATTGGCAGC
droKik1 scf7180000302643:665996-666063 - CTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACC-CTT-------TCAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAGCGTAACTGGCAGC
droFic1 scf7180000453842:1045168-1045219 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droEle1 scf7180000491273:14971-15032 - ACTTGACAAAAGCTGGCAGCGGAT---CACAAATG-------GCCGCCAGACTCCAG-GGTGGAGTACAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000759261:553-900 - ACTTGACAAAAGCTGGCGGCGGAT---CACAAATG-------GCCACCAGACTCCAG-GGTGGAGTACAGCAAGAGATCGGGAACT--ATATGC---------------C-CAACTGCCTAAG-------CT----------------TT----AATAAAAC-TTTGGCAAGGC--AAGCCTAAGC---------------T-AACAATCAAATTCATTACATTTAAAACC----AAG----------CCAAATGTGTATTGA--------------TAATAACTA---CAAACA---------TT-----------------ATATCAATACCATGTTTGCTAAGTGTTATTTGGATTGGTTACAGTAGTTGTAATTTATTTCTTATTTTTATCCGTTTCTAAT-TG------------GC-------TATTCTG----------------------------TAATGTT-TTT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droBia1 scf7180000302261:642175-642457 + ACTAGACAAAAGCTGGCAGCGAAC---CGCAAATG-------GCAGCCAGGCTCCAG-GGTGGAGGACAGCAAGGGGCTGGGAACT--ATGTGC---------------C-TAAAGGCC-AAG-------AATG-----CCCAAAGTCCG-ACCAATG-AACTTTGGGCGAGGC--AAGCTTAAGC---------------T-AACAAAAA-A----------------------------------------------------------------TAATAATCA---TAAACA---------TATCTTATATATTTTTAATTT---------ATCCTAA---------------------------------------------------------------T-TGGTTACTAATTT---GT--TACC-----------------TTATT------------CTCCACCCATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droTak1 scf7180000415704:327054-327320 - ACTAGACAAAAGCTGGCAGCGAGT---CACCGATG-------GCTGCCAGTCTCCAG-GGTGGAGGACAGCAAGAGGTTGGAAACT--ATGTGC---------------C-C------------------------------AAAGTCCA-ATCAATG-GAT-TTTGGAAAGGCCTAAGCCTGAGC---------------T-AACAAATA-A---------------------------------------------------------------ATAGTTACCATAATAATAATTATAATAATA-----------------AT---------ATCATTA---------------------------------------------------------------T-TAATTACTAATTAT--GTTTTACC--CC------------TTTA--------------TTTTACCCACT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGTAACTGGCAGC
droEug1 scf7180000409005:1089712-1089990 + ACTAGACAAAAGCTGGCAGTGGAT---CACAAATG-------GCTGCCAGACTCCAG-GGTGGAGCACAGCAAGAGGTCGGAATGT--ATAGGC---------------C-TAGCTGCCTAAG-------TT-G-----CTGCAAGCCAA-CTCTATT-GAC-TCTGGCAAGGC--AGTCTTAAGC---------------T-AACAAGCA-T-TCAGTACATATAATAAT----AATAATTATTATTACAAATTTGTATTAATAACTTACATTTT---------------------------------------------------------------------------------------------------------------------------------------------TAC--G----------TTT----------------------------TCCTATCAACT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
dm3 chr2L:5202890-5203165 + ACTAGACAAAAGCTGGCAGTGGAC---TACAAATG-------GCTGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCCGAGC--AAACGC---------------CCTAACTATCTAAG-------TT-A---ACCTTAAAGCCAA-ATCAATG-GAC-TTTGGAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCGATTACTACCATAATCACTATCTGCT------------------------------ATGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TTTGACCAATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAATTGGCAGC
droSim2 2l:5007713-5007985 + dsi_18005 ACTAGACAAAAGCTGGCAGCGGAC---TACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCGGAGT--AAACGC---------------CCTAACTGCCTAAG-------TT-A---ACCTGAAAGCCAA-ATCAATT-GAC-TTTGAAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCAAATACCATCTTAATCACTATCT---------------------------------ATGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TATGACCAATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droSec2 scaffold_5:3284095-3284370 + dse_1398 ACTAGACAAAAGCTGGCAGCGGAC---TACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCGGAGT--AAACGC---------------CCTAACTACCTAAG-------TT-A---ACCTTAAAGCCAA-ATCAATG-GAC-TTTGAAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCAATTACCATCTTAATCACTATCTGGT------------------------------GTGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TATGACCAATT-------CTAGCGAGGTTGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droYak3 2L:10324458-10324755 - ACTAGACAAAAGCTGGCAGCGGAC---TGCAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGTGGGCAGTGAGCAC---------------CCCAACTGCCTAAG-------TC-A---ACCTTAAAGCCAATATCAATG-GAC-TTTGGCAAGGC--GAGCTTAAGC---------------T-AACATTCA-A---------------------------------------------------------------TCGATAACCATCTTTATCGCTATCTCTT------------------------------GGGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------GCACTTTTATT------TTTATT---TTTTATTTCTATGGCCCATT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC
droEre2 scaffold_4929:5280893-5281166 + ACTAGACAAAAGCTGGCAGCGGAC---CACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGCACAGCAAGAGGTCGGGAGTA--ACCAGC---------------C-TAACTGCCTAAG-------TT-A---GCCTTAAAGCCAA-GGCAATG-GAC-TTTGGCGAGGC--AAGC-TAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCGATTACCATCTTAGTCGCTATCTTCC------------------------------ATGATTG---------------------------------------------------------------TTCCATAACTAATTT-AC-------CCACTTT----------------------------TATGGCCAATT-------CCAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCCAGACAAAAGCTGGCATTGCCTTCTCTCAATGG-------GCTGCCAGACTCCAG-GGCGGAGCACAGTAACGC------AGCT-----TGCCTGGAAATCTG----CTAAACTGTTCTAT-------TT-G----AGGTACAGCTTT---GAATA-GAC-ACT--CGGTGC--------AGGC---------------T-TACACTCT-----------------------------------------------------------------------CCCAC--------------TCC------------------------------ATGTCTGTTCAG----------------------------------------------------------CTAG---ACTAATCACGC-------CCTCTTC----------------------------TATCGCCCA-C-------ACAGTGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGCAATTGGCAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................GGAGCACAGTAACGC------AGCT-----TGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0010700003
............................................................CGGAGCACAGTAACGC------AGCT-----TGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.004300001
.............................................................................................................................................................A-GAC-ACT--CGGTGC--------AGGC---------------T-TACACTC......................................................................................................................................................................................................................................................................................................................................2514.004300001
............................................................CGGAGCACAGTAACGC------AGCT-----TGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.004000004
............................................................CGGAGCACAGTAACGC------AGCT-----TGCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003300000
.............................................................GGAGCACAGTAACGC------AGCT-----TGCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003100002
................................................................................................................................................................AC-ACT--CGGTGC--------AGGC---------------T-TACACTC......................................................................................................................................................................................................................................................................................................................................2312.002200000
.............................................................GGAGCACAGTAACGC------AGCT-----TGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100001
.............................................................GGAGCACAGTAACGC------AGCT-----TGCCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
........................................................................................................................................................................CGGTGC--------AGGC---------------T-TACACTC......................................................................................................................................................................................................................................................................................................................................1812.002200000
............................................................................................................................................................TA-GAC-ACT--CGGTGC--------AGGC---------------T-TACACTC......................................................................................................................................................................................................................................................................................................................................2612.002100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAGC............1811.001100000
............................................................CGGAGCACAGTAACGC------AGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........GCTGGCATTGCCTTCTCTCAATGG-------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................GGAGCACAGTAACGC------AGCT-----TGCCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................CCTTCTCTCAATGG-------GCTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................GCGGAGCACAGTAACGC------AGCT-----TGCCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.........................................................................................................................AT-------TT-G----AGGTACAGCTTT---GAAT...........................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..............................................................GAGCACAGTAACGC------AGCT-----TGCCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................CGGAGCACAGTAACGC------AGCT-----TGCCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGCTCTGCACGCAGCGCA.........2211.001100000
.............................................................GGAGCACAGTAACGC------AGCT-----TGCCTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGCGCAATTGGCAGC2011.001100000
....................................................................................................................GTTCTAT-------TT-G----AGGTACAGCTTT---GAAT...........................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGC..........2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGCAAT.......2311.001001000
droVir3
ACCAGACAAAAGCTGGCAGTACCTCTTCTCAATAG-------GCTGCCAGTCTCCAGGGGTGGAGCACAGCGAGCAGCTTGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCTG-----TTCAAAGTCGC-GCCAAAG--AC-TTTGCTCGGATC-CAGC--AAGC---------------T-TACATAA----------C------------------------------------------TAC----------CTAATAAACGTTCCAGTTAATGTTTAA---------------------------------AAT---------------------------------------------------------------------ATTTCTAA--C-CG-------TTTTC------------TTTATT--------------TA-TCCCTTCTATAAAACAGTGAGGTCGGCCGCCTAACGTGTCCGCTCTGCACGCAACGCAATTGGCAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................22111.0011000000000000002600010010000000000000000000000000000000000000010
.....................................................................................................................................................................TGCTCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2618.008000000000000000113210000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2318.008000000000000002420000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCA........................................................................................................................................................................................................................................................................................................................................................................................................................2017.007000000000000001310101000000000000000000000000000000000000000000
................................................................................GGAGCT-----TGC---------------C-TGG--------ACGTCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................2116.006000000000000002220000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2116.006001000000000000500000000000000000000000000000000000000000000000
....................................................................................................................................................................TTGCTCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2715.005000000000000001220000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGCAC.................2013.003010100000000000000000000000001000000000000000000000000000000000
..............................................................................TTGGAGCT-----TGC---------------C-TGG--------ACGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000000000000000000100020000000000000000000000000000000000000000
......................................................................................................................................................................GCTCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2513.003000000000000000030000000000000000000000000000000000000000000000
..............................................................................TTGGAGCT-----TGC---------------C-TGG--------ACGTCA........................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000201000000000000000000000000000000000000000000000
........................................................................................................................................................................TCGGATC-CAGC--AAGC---------------T-TACAT........................................................................................................................................................................................................................................................................................................................................2113.003100000000000000010000010000000000000000000000000000000000000000
...........................................................................................................................................................................GATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2013.003002000000000000000000100000000000000000000000000000000000000000
..............................................................................TTGGAGCT-----TGC---------------C-TGG--------ACGTCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000200000000000000000000000000000000000000000000000
.......................................................................................................................................................................CTCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2412.002000000000000001010000000000000000000000000000000000000000000000
....................................................................................................................................................................TTGCTCGGATC-CAGC--AAGC---------------...............................................................................................................................................................................................................................................................................................................................................1912.002000000000000000100000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTAACGTGTCCGCTCTGCACGC...............2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGTCGGCCGCCTAAC................................2011.001010000000000000000000000000000000000000000000000000000000000000
................................................................................GGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCTG-----TTCAAAGTCGC-GCC..............................................................................................................................................................................................................................................................................................................................................................................................3911.001000000000000000000000000000000000000000000000000000000000100000
......................................................................CGAGCAGCTTGGAGCT-----TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
................................................AGTCTCCAGGGGTGGAGCACAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................TGCTCGGATC-CAGC--AAGC---------------T-T............................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTAACGTGTCCGCTCTGCACG................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCT...................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
............................................................................GCTTGGAGCT-----TGC---------------C-TGG--------ACGTCT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................TTTGCTCGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGCCTAACGTGTCC..........................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GTCGC-GCCAAAG--AC-TTTGCTC..............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
................................................................................GGAGCT-----TGC---------------C-TGG--------ACGTCAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................TTGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCTG-----.............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CGGATC-CAGC--AAGC---------------T-TACATAA----------............................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................TCGGATC-CAGC--AAGC---------------T-TACA.........................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTCCGCTCTGCACG................1911.001000000010000000000000000000000000000000000000000000000000000000
......................................................CAGGGGTGGAGCACAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTCGGCCGCCTAACGTGTC...........................2311.001000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................AAAG--AC-TTTGCTCGGATC-CAGC--AAGC---------------T-TACATAC----------............................................................................................................................................................................................................................................................................................................................3411.001000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAACG...........1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................GAGCT-----TGC---------------C-TGG--------ACGTCAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
......................................................................CGAGCAGCTTGGAGCT-----TGC---------------C-TGG--------ACGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTCTG-----.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAACGTGTCCGCTCTGCACGCAACGC..........2911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTAACGTGTCCGCTCTGCAC.................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................TGGAGCT-----TGC---------------C-TGG--------ACGTCAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................TCGGATC-CAGC--AAGC---------------T-TACATT.......................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..........................TCTCAATAG-------GCTGCCAGTCTCCAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.......................................................AGGGGTGGAGCACAGCGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
droGri2
GTCAAACAAAAGCTGGCAGCTCTTG-ATTTTATTG-------GCCGCCAGTCTCCAG-GGCGGAGCACAGTAAACACTTGG-AGCT-----TGC---------------C-TG----------------------------------------------------TGGCAATGC-------TGATTCGACTTTTAACCGGTC-AGCAA------------CATGCAACAGC--------------CTTGCAAGTTTACATTCCTAGTTGGCATTTT--------------------TATATGGT------------------------------A-----------------------------------------------------------------------TACTTTCTAATTA-TC-------GAAC-------------------------------TTTGTCTGTCT-------ATAGTGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTCCGCTCTGCACGCAACG...........2311.00110
..........................................GCCGCCAGTCTCCAG-GGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
droWil2
ACTAGACAAAAGCTGTTGGA---A---TCCTATTTGTTTTGATCCAACAGACTCCAG-GGTGGAGCACAGCAAATGATACAAAGCT--ACCGG-----AAGATTGATATT-CAACTGTATGA----------TGTTTGTCTCACGGCT------------------------------GCGAATGC---------------T-AACAACGAAA-------------ATAATCTATAATATTTGT------------AAATTCCTA---------------------------------------------------------------------------A---------------------------------------------------------------T-------TTAATTAA--AATTTATC--TT------------TTTATT------------T-ATAAT-TTT-------GCAGCGAGGTCGGCCGCCTAACCTGTCCGCTCTGCACGCAACGTAATTGGCAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGTCCGCTCTGCACGCA..............2112.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTAACCTGTCCGCTCTGCACGC...............2512.00210010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAACCTGTCCGCTCTGCA..................2112.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGCCTAACC...............................2112.00220000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCGGCCGCCTAACCTGTCCGCTC......................2612.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTAACCTGTCCGCTCTGCA..................2211.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAACCTGTCCGCTCTGCACGCAAC............2711.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCTGTCCGCTCTGCACGC...............2111.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAACCTGTCCGCTCTGCACG................2311.00101000
.............................................AACAGACTCCAG-GGTGGAGCACAGCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCTGTCCGCTCTGCACGCAAC............2411.00110000
...AGACAAAAGCTGTTGGA---A---TCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...............................................................................CAAAGCT--ACCGG-----AAGATTGATATT-C........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...................................GTTTTGATCCAACAGACTCCAG-GGTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010
.................................................................................AAGCT--ACCGG-----AAGATTGATATT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACCTGTCCGCTCTGCACGCAAC............2511.00110000
............................................................TGGAGCACAGCAAATGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTAACCTGTCCGCTCTGCACGC...............2611.00110000
...........................................................GTGGAGCACAGCAAATGATACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
...........................................................................GATACAAAGCT--ACCGG-----AAGATTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACCTGTCCGCTCTGCACG................2111.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAACCTGTCCGCTCTGCAC.................2211.00100010
...........................................................................GATACAAAGCT--ACCGG-----AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACCTGTCCGCTCTGCAC.................2011.00100010
dp5
ACTAGACAAAAGCTGGCAGATGCT--ACCCAAATG-------ACTGCCAGACTCCAA-GGTGGAGCACAGCAAAAGAGGGAGAACT--ATG--------------ATACT-CAA--------GCGGCAG--CTG-----CTTAAAGCCAA-ATTAAAG-CTATTTTGATATGGCC-CAGCTTGTGC---------------T-AACAATTAGA----------------------------------------------------------------TCGTACTCATCT------------GCT--------------------------------GA--A---------------------------------------------------------------TTCAAATACTAATAT-CT-------TTTTCTT----------------------------TTTGTCT-TCC-------TTAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTT----------------------------TTTGTCT-TCC-------TTAG..................................................2012.0020000000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCTGCACGCAACGCAACC......2211.0010010000000
...........................................................GTGGAGCACAGCAAAAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.............................................................GGAGCACAGCAAAAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................................................................................................................................................................GATATGGCC-CAGCTTGTGC---------------T-AA...........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................CT--ATG--------------ATACT-CAA--------GCGGCAG--CTG-----CTT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
............................................................TGGAGCACAGCAAAAGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................G-------ACTGCCAGACTCCAA-GGTGGAGCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................G--------------ATACT-CAA--------GCGGCAG--CTG-----CTT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
...........................................................GTGGAGCACAGCAAAAGAGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.............................................................GGAGCACAGCAAAAGAGGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................A-GGTGGAGCACAGCAAAAGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................GGAGCACAGCAAAAGAGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCGCTCTGCACGCAAC............2011.0010100000000
.........................................................................AAGAGGGAGAACT--ATG--------------ATA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000000
..........................................................................................................................................................................TGGCC-CAGCTTGTGC---------------T-AACAATT......................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................GTGGAGCACAGCAAAAGAGGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCTGCACGCAACGCAACT......2211.0010100000000
..................................................................................AACT--ATG--------------ATACT-CAA--------GCGGCAG--C....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.............................................................GGAGCACAGCAAAAGAGGGAGAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTCTGCACGCAACGCAACTGGC...2611.0010100000000
droPer2
ACTAGACAAAAGCTGGCAGATGCT--ACCCAAATG-------ACTGCCAGACTCCAA-GGTGGAGCACAGCAAAAGAGGGAGAACT--ATG--------------ATACT-CAA--------GCGGCAG--CTG-----CTTAAAGCCAA-ATTAAAG-CTATTTTGATATGGCC-CAGATTGTGC---------------T-AACAATTAGA----------------------------------------------------------------TCGTACTCATCT------------GCT--------------------------------GA--A---------------------------------------------------------------TTCAAATACTAATAT-CT-------TTTTCTT----------------------------TTTGTCT-TCC-------TTAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAACGCAACTGGCAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................AATG-------ACTGCCAGACTCCAA-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAACGCAACTG.....2512.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAACGCAACT......2412.002200000
.....................................................CCAA-GGTGGAGCACAGCAAAAGAGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGTCTAACGG..............................1911.001100000
...........................................................GTGGAGCACAGCAAAAGAGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................GGAGCACAGCAAAAGAGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................GCAAAAGAGGGAGAACT--AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGTCGGCCGTCTAACGT..............................2011.001100000
...........................................................GTGGAGCACAGCAAAAGAGGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.....................................................CCAA-GGTGGAGCACAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAACGTGTCCGCTCTGCACGC...............2411.001100000
.............................................................GGAGCACAGCAAAAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGTCTAACGT..............................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTGTCCGCTCTGCACGCA..............2211.001010000
droAna3
ACTAGACAAAAACTGGCAGCGGAT---GACCAATG-------GCCGCCAGACTCCAG-GGTGGAGCACAGCAAGAGATGTGGATCT--TCACGC---------------T-CAA-AGTCTAAGCTGCTG--CTT-----TTTTAAGACTC-GTCTAAG-AAA-TTTGACAAGAA--CAGCTTAAGC---------------TTAACAATTA-A---------------------------------------------------------------TT----CTCACAC--------------T------------------------------AAGATT-------------------GGTTGCGG-------------------------------------TTTAATTACTAGTTA-AT-------ACACCCTTATTAATTAA---ATTCTTT--------T-TTAAA-CTT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGTAATTGGCAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGT..........2011.001000010
.............TGGCAGCGGAT---GACCAATG-------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.................AGCGGAT---GACCAATG-------GCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAACGTGTCCGCTCTGCACGC...............2411.001010000
................................................................................................................................................................AA-TTTGACAAGAA--CAGCT...................................................................................................................................................................................................................................................................................................................................................................1811.001001000
................................................................................GGATCT--TCACGC---------------T-CAA-AGTCTAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......AAAAACTGGCAGCGGAT---GACCAATG-------GCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGGCTAACGTGTCCGCTCTGCACGC...............2811.001010000
................................ATG-------GCCGCCAGACTCCAG-GGTGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGGCTAACGTGTC...........................2511.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAACGTGTCCGCTCT.....................1811.001010000
..............................................................GAGCACAGCAAGAGATGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCTAACGTGTCCGCTC......................2011.001100000
............................................................................ATGTGGATCT--TCACGC---------------T-CAA-AGTCTAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................................................................CAGCTTAAGC---------------TTAACAATT......................................................................................................................................................................................................................................................................................................................................1911.001000001
.................................................................................GATCT--TCACGC---------------T-CAA-AGTCTAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACGCAGCGTA.........2111.001000010
.........................................................................................................................................................CTAAG-AAA-TTTGACAAGAA--CAGC....................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGCACGCAGCGTAAT.......1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGGCTAACGTGTCCGCT.......................2611.001010000
droBip1
ACTAGACAAAAGCTGGTAGCGGAT---TTCCAATG-------GCTGCCAGACTCCAG-GATGGAGCACAGCAAGAGGTGTGGAGCT--TCATGC---------------C-CAA-AGTCTAAGCTGCTG--CTG-----CTTCAATACTT-GTCAAAG-ATA-TTTGACAAACA--CAGCTTAAGC---------------TTAACAAATA--------------------------------------------------------------------CTTATCATACTAAGAG--------------------------------------------T-------------------GGTTGTGG-------------------------------------TGCAGTTACTAGCTT-AT----C--AGTTCCTTACTAATTAA---CT----T--------T-TTAAT-CTT-------TCAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACGCAGCGTAATTGGCAGCSizeHit CountTotal NormTotal
No Reads
droKik1
CTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACC-CTT-------TCAGCGAGGTCGGCCGTCTAACGTGTCCGCTCTGCACGCAGCGTAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
ACTTGACAAAAGCTGGCAGCGGAT---CACAAATG-------GCCGCCAGACTCCAG-GGTGGAGTACAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACTTGACAAAAGCTGGCGGCGGAT---CACAAATG-------GCCACCAGACTCCAG-GGTGGAGTACAGCAAGAGATCGGGAACT--ATATGC---------------C-CAACTGCCTAAG-------CT----------------TT----AATAAAAC-TTTGGCAAGGC--AAGCCTAAGC---------------T-AACAATCAAATTCATTACATTTAAAACC----AAG----------CCAAATGTGTATTGA--------------TAATAACTA---CAAACA---------TT-----------------ATATCAATACCATGTTTGCTAAGTGTTATTTGGATTGGTTACAGTAGTTGTAATTTATTTCTTATTTTTATCCGTTTCTAAT-TG------------GC-------TATTCTG----------------------------TAATGTT-TTT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
droBia1
ACTAGACAAAAGCTGGCAGCGAAC---CGCAAATG-------GCAGCCAGGCTCCAG-GGTGGAGGACAGCAAGGGGCTGGGAACT--ATGTGC---------------C-TAAAGGCC-AAG-------AATG-----CCCAAAGTCCG-ACCAATG-AACTTTGGGCGAGGC--AAGCTTAAGC---------------T-AACAAAAA-A----------------------------------------------------------------TAATAATCA---TAAACA---------TATCTTATATATTTTTAATTT---------ATCCTAA---------------------------------------------------------------T-TGGTTACTAATTT---GT--TACC-----------------TTATT------------CTCCACCCATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
ACTAGACAAAAGCTGGCAGCGAGT---CACCGATG-------GCTGCCAGTCTCCAG-GGTGGAGGACAGCAAGAGGTTGGAAACT--ATGTGC---------------C-C------------------------------AAAGTCCA-ATCAATG-GAT-TTTGGAAAGGCCTAAGCCTGAGC---------------T-AACAAATA-A---------------------------------------------------------------ATAGTTACCATAATAATAATTATAATAATA-----------------AT---------ATCATTA---------------------------------------------------------------T-TAATTACTAATTAT--GTTTTACC--CC------------TTTA--------------TTTTACCCACT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGTAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
droEug1
ACTAGACAAAAGCTGGCAGTGGAT---CACAAATG-------GCTGCCAGACTCCAG-GGTGGAGCACAGCAAGAGGTCGGAATGT--ATAGGC---------------C-TAGCTGCCTAAG-------TT-G-----CTGCAAGCCAA-CTCTATT-GAC-TCTGGCAAGGC--AGTCTTAAGC---------------T-AACAAGCA-T-TCAGTACATATAATAAT----AATAATTATTATTACAAATTTGTATTAATAACTTACATTTT---------------------------------------------------------------------------------------------------------------------------------------------TAC--G----------TTT----------------------------TCCTATCAACT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotal
No Reads
dm3
ACTAGACAAAAGCTGGCAGTGGAC---TACAAATG-------GCTGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCCGAGC--AAACGC---------------CCTAACTATCTAAG-------TT-A---ACCTTAAAGCCAA-ATCAATG-GAC-TTTGGAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCGATTACTACCATAATCACTATCTGCT------------------------------ATGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TTTGACCAATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAATTGGCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................GGTGGCGAACAGCAAGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTGGCGAACAGCAAGAGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000001000000000000
.............................................................GGCGAACAGCAAGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................TTGGAAAGGC--GAGCTTAAGC---------------T-AACATTT......................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGGCTAACGTGTCCGCTC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCGAACAGCAAGAGGTCGCCGAGC--A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTGGCGAACAGCAAGAGGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTGTCCGCTCTGCACACAGCGAA.........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATT-------CTAGCGAGGTCGGCCGGC....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CGCCGAGC--AAACGC---------------CCTAACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CAA-GGTGGCGAACAGCAAGAGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TCTGCT------------------------------ATGATTA---------------------------------------------------------------TTCAATTACTAAT.......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------CTAGCGAGGTCGGCCGGCTAACGTG.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................GAC-TTTGGAAAGGC--GAGCTTAAGC---------------...............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GACAAAAGCTGGCAGTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................A---------------------------------------------------------------TCGATTACTACCATAATCACTA..............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATG-GAC-TTTGGAAAGGC--GAGCTTAAG...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGGCGAACAGCAAGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTCCGCTCTGCACACAGCGG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TACTACCATAATCACTATCTGCT------------------------------ATGA......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTTGGAAAGGC--GAGCTTAAGC---------------T-.............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................GGC--GAGCTTAAGC---------------T-AACATTT......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAACGTGTCCGCTCTGCAC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTCCGCTCTGCACACAGCGAA.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGCACA................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGCACACAGCGAAATTGGCA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTCCGCTCTGCACACAGCG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TG-GAC-TTTGGAAAGGC--GAGCTTAAGC---------------...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTCCGCTCTGCACACAGC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTGTCCGCTCTGCACACAGCGAAA........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCGGCCGGCTAACGT..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AA-GGTGGCGAACAGCAAGAGGTCGCCGAGC--A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCGCTCTGCACACAG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................GCTGCCAGTCTCCAA-GGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGGCTAACGTGTCCGC........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AC-TTTGGAAAGGC--GAGCTTAA................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTGTCCGCTCTGCACA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTCCGCTCTGCACA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGTCGGCCGGCTAACGTGTCCGCT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................ATG-GAC-TTTGGAAAGGC--GAGCTTAAGC---------------...............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGTCGGCCGGCTAACGT..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................A-GGTGGCGAACAGCAAGAGGTCGCCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCTAACGTGTCCGCTCTGCACACAGC............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCTAACGTGTCCGCTCTGCA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTGGCGAACAGCAAGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
ACTAGACAAAAGCTGGCAGCGGAC---TACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCGGAGT--AAACGC---------------CCTAACTGCCTAAG-------TT-A---ACCTGAAAGCCAA-ATCAATT-GAC-TTTGAAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCAAATACCATCTTAATCACTATCT---------------------------------ATGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TATGACCAATT-------CTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGCGAAACTGGC...2712.00200200000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGGCTAACGTGT............................2411.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGGCTAACGTGG............................2411.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGCTCTGCACACAGC............1911.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTCCGCTCTGCACA................1911.00101000000000000000
.....................................................................................................................................................................TGAAAAGGC--GAGCTTAAGC---------------T-AACATTT......................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTT----------------------------TATGACCAATT-------CTA...................................................2111.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGC...................1811.00101000000000000000
.................................................................AACAGCAAGAGGTCGCGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGC............1811.00100100000000000000
.............................................GCCAGTCTCCAA-GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
.............................................GCCAGTCTCCAA-GGTGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGTCGGCCGGCTAA.................................1811.00100001000000000000
....................................................................................................................................................................TTGAAAAGGC--GAGCTTAAGC---------------T-AACATTT......................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
................................................................GAACAGCAAGAGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................15180.06100000000001000000
droSec2
ACTAGACAAAAGCTGGCAGCGGAC---TACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGCGGAGT--AAACGC---------------CCTAACTACCTAAG-------TT-A---ACCTTAAAGCCAA-ATCAATG-GAC-TTTGAAAAGGC--GAGCTTAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCAATTACCATCTTAATCACTATCTGGT------------------------------GTGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------CCACTTT----------------------------TATGACCAATT-------CTAGCGAGGTTGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................GTGGCGAACAGCAAGAGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300
.............................................................GGCGAACAGCAAGAGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTTGGCCGGCTAACGTGTCC..........................2311.0010010
....................................................................................................................................................AA-ATCAATG-GAC-TTTGAAAAGGC--GAGC....................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGCGAAA........2211.0010010
............................................................TGGCGAACAGCAAGAGGTCGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................................................................CGC---------------CCTAACTACCTAAG-------TT-...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...........................................................GTGGCGAACAGCAAGAGGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCACACAGCGAAACTGGC...2211.0010010
.....................................................................................................................................................................TGAAAAGGC--GAGCTTAAGC---------------T-AACATT.......................................................................................................................................................................................................................................................................................................................................2611.0010010
droYak3
ACTAGACAAAAGCTGGCAGCGGAC---TGCAAATG-------GCCGCCAGTCTCCAA-GGTGGCGAACAGCAAGAGGTCGTGGGCAGTGAGCAC---------------CCCAACTGCCTAAG-------TC-A---ACCTTAAAGCCAATATCAATG-GAC-TTTGGCAAGGC--GAGCTTAAGC---------------T-AACATTCA-A---------------------------------------------------------------TCGATAACCATCTTTATCGCTATCTCTT------------------------------GGGATTA---------------------------------------------------------------TTCAATTACTAATTT-CT-------GCACTTTTATT------TTTATT---TTTTATTTCTATGGCCCATT-------TTAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTCCGCTCTGCACACAGCGAAAC.......2711.00100000010000
.............................................................GGCGAACAGCAAGAGGTCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGCGAAACTG.....2511.00101000000000
.............................................................................................................................................................G-GAC-TTTGGCAAGGC--GAGCT...................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................TTGGCAAGGC--GAGCTTAAGC---------------T-AAC..........................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTCTGCACACAGCGAA.........2111.00100010000000
.....................................................................................................................................................................TGGCAAGGC--GAGCTTAAGC---------------T-AACATTC......................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.................................................GTCTCCAA-GGTGGCGAACAGCAAGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................................................................................................................................................................CAAGGC--GAGCTTAAGC---------------T-AACATTC......................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAACGTGTCCGCTCTGCAC.................2211.00100010000000
.............................................................GGCGAACAGCAAGAGGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGCACACAGCGAA.........2811.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCGCTCTGCACACAGCGA..........2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCTAACGTGTCCGCTCTGCA..................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGGCTAACGTGTCCGCTCTG....................2311.00101000000000
droEre2
ACTAGACAAAAGCTGGCAGCGGAC---CACAAATG-------GCCGCCAGTCTCCAA-GGTGGCGCACAGCAAGAGGTCGGGAGTA--ACCAGC---------------C-TAACTGCCTAAG-------TT-A---GCCTTAAAGCCAA-GGCAATG-GAC-TTTGGCGAGGC--AAGC-TAAGC---------------T-AACATTTA-A---------------------------------------------------------------TCGATTACCATCTTAGTCGCTATCTTCC------------------------------ATGATTG---------------------------------------------------------------TTCCATAACTAATTT-AC-------CCACTTT----------------------------TATGGCCAATT-------CCAGCGAGGTCGGCCGGCTAACGTGTCCGCTCTGCACACAGCGAAACTGGCAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................TGGCGCACAGCAAGAGGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000110
............................................................TGGCGCACAGCAAGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAACGTGTCCGCTCTGC...................1911.0010100000
.............................................................GGCGCACAGCAAGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................GTGGCGCACAGCAAGAGGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCTAACGTGTCCGCT.......................1911.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTCCGCTCTGCACACA..............2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTGTCCGCTCTGCAC.................1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTGCACACAGCGAAACTGGCAGC2711.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGCA..................1911.0010001000
............................................................TGGCGCACAGCAAGAGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGTCGGCCGGCTAACGTGTCCGCTC......................2911.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGTCGGCCGGCTAACGTGTCCGC........................2811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGCAC.................2011.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGTGTCCGCTCTGC...................1811.0010000010
...........................................................GTGGCGCACAGCAAGAGGTCGGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.............................................................GGCGCACAGCAAGAGGTCGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTCCGCTCTGCACACAGCGAAA........2511.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAACGTGTCCGCTCTGC...................2011.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACAGCGAAACTGGCA..1911.0011000000
...........................................................GTGGCGCACAGCAAGAGGTCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100

Generated: 05/18/2015 at 12:52 AM