ID:

dmo_1537

 Coordinate:

scaffold_6500:12756539-12756689 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.7 -7.6 -6.7

Flybase annnotation

CDS [Dmoj\GI11639-cds]; exon [dmoj_GLEANR_1172:4]; intron [Dmoj\GI11639-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAGCCGCCACTACGCATGAACGGACTTAGCCGAGTCGGCGGCGGTGGCGGTGAGTCCACCATTTATATTTGACCAGCAGCAGATGTAGCTGCTGCTGCAGTGCCGCAGCTGGCTTAGAGCATAGAGCATAGAGCTTAGTCTATACCCTACCAATATTTACAACACACTTTTAATTTGTTTTCCTTTTGAAACAACAACAAAAGCAATAAGTTATCACAAATTCGTTTTGTAATGTGCACAAACAGAAACA
*********************************************************************************************************...((((((((...((.....))...)))).))))...............................................**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V041
embryo
 M060
embryo
.........................................................................................................GCAGCTGGCTTAGAGCATA............................................................................................................................... 19 0 1 2.00 2 1 1 0 0
.........ACTACGCATGAACGGACTTAGCCGAGT....................................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0
.....................................................................................................................................................................................TCCTTTTGAAACAACAACAAA................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................CACCATTTATAGTTGACCAGCAGCAG........................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0
..............GCATGAACGGACTTAGCCGA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.................................................................................AGATGTAGCTGCTGCTGCAGTGCCGC................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
.................................................................................................GCAGTGCCGCAGCTGGCTTAGAGC.................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................GTTATCACAAATTCGTTTT...................... 19 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................ACACTTTTAATTTGTTTTCCTTT................................................................ 23 0 1 1.00 1 1 0 0 0
................................................................................................TGCAGTGCCGCAGCTGGCTTAGAGC.................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
.................................................................................................GCAGTGCCGCAGCTGGCTTAGAGCAT................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................AACAACAACAAAAGCAATAAGTTATCACA................................ 29 0 1 1.00 1 1 0 0 0
.........................................................................................................GCAGCTGGCTTAGAGCATAGAGCAT......................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................TACAACACACTTTTAATTT.......................................................................... 19 0 1 1.00 1 1 0 0 0
.................................................................................................................................TAGAGCTTAGTCTATACCCTACC................................................................................................... 23 0 1 1.00 1 0 1 0 0
...............................................................................................................GGCTTAGAGCATAGAGCATAGAG..................................................................................................................... 23 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................TCCTTTTGAAACAACAACAAAAGC.............................................. 24 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................AGCAATAAGTTATCACAAATTCGT......................... 24 0 1 1.00 1 1 0 0 0
....................................................................TTTGACCAGCAGCAGATGTAG.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................................TTCGTTTTGTAATGTGCACA.......... 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................CATAGAGCTTAGTCTATACCCTAC.................................................................................................... 24 0 1 1.00 1 0 1 0 0
.........................................................................................................................ATAGAGCATAGAGCTTAGTCTAT........................................................................................................... 23 0 1 1.00 1 1 0 0 0
.......................GACTTAGCCGAGTCGGCGGCGGG............................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 1 0
..............................................................................................................................................................................................................ATAAGTTATCACAAATTCGTTTT...................... 23 0 1 1.00 1 1 0 0 0
..............GCATGAACGGACTTAGCCGAGTCGGC................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
................................................................................................................................ATAGAGCTTAGTCTATACCCTACCA.................................................................................................. 25 0 1 1.00 1 0 1 0 0
...............CATGAACGGACTTAGCCGA......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..............................................................................................................................................ATACCCTACCAATATTTACA......................................................................................... 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................GCATAGAGCATAGAGCTTA................................................................................................................. 19 0 1 1.00 1 1 0 0 0
........................................................................................................CTCAGCTGGTTTAGAGCGTA............................................................................................................................... 20 3 7 0.14 1 0 1 0 0
..........................................................................................................................TAGCACATATAGCTTAGTC.............................................................................................................. 19 3 20 0.05 1 0 0 0 1
...........................................................................................GCTGCTGCAGGGCCGCAAC............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0

Anti-sense strand reads

TGTCGGCGGTGATGCGTACTTGCCTGAATCGGCTCAGCCGCCGCCACCGCCACTCAGGTGGTAAATATAAACTGGTCGTCGTCTACATCGACGACGACGTCACGGCGTCGACCGAATCTCGTATCTCGTATCTCGAATCAGATATGGGATGGTTATAAATGTTGTGTGAAAATTAAACAAAAGGAAAACTTTGTTGTTGTTTTCGTTATTCAATAGTGTTTAAGCAAAACATTACACGTGTTTGTCTTTGT
****************************************************************...((((((((...((.....))...)))).))))...............................................********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body
........................................................................................CGACGACGACGTCACGGCG................................................................................................................................................ 19 0 3 0.33 1 1 0
..................................CAGCCGACCCCACCGCGACTC.................................................................................................................................................................................................... 21 3 10 0.10 1 0 1
......GGGTGGTGGGTACTTGCC................................................................................................................................................................................................................................... 18 3 19 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:12756489-12756739 - dmo_1537 ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATTTGACC--AG---CAGCAGATGTAGCTGCTGCTG--------------------------------------------------------------------------------------CAGTGCC------------------------GCAGCTGGC-----------TTAGAGC-------------------------------ATAG-AGCAT-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----TACCCTACCAATAT-TTACAACACACT-TTTAATTTGT-------------------------------------------------TTTCCTT--TTG--------------------------------------------------------AAACAACAACAAA---AGCAA----TAAGTTATCACAAA--TTCGTTT--------TGTAA-TGTGCACAAACAGA-----AACA
droVir3 scaffold_12963:2568032-2568212 - ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGGGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATATGACC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTTAGATTTGAT-CTAGTTTATATCCA---------------------------------------------------------------------TTTGATTTGTTTTATTTCA-----AC-AACAAAAATTTG---------------------------------------------------------------------------------------------------------------------ATATCACAAA--TTTGTTT--------TCTAA-TGTGCACAAA---A-----ATCA
droGri2 scaffold_15252:2179774-2179984 - ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATCTGACC--AA---CAGCA------------GTAGCA----------------------------------------------------------------------------------------------G---------------TAGCAGCAGCACCT-----------GGCCAAT-------------------------------A------ATG------------------------------------------------------------------GC-CTGCTTAGT-------TT------------------------------------------------T----TATCCTAGTA---TCC--TAGTTAACTCTTTGATTTGTTTTTATT-------------------TAT---------------------------------------------------------------------------------------------------------------------CTATCACAAAAATTGCTTT--------TGTAATTGTGCACAAA---G-----GTCA
droWil2 scf2_1100000004521:6865696-6865965 - -CAGCAGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCGTATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTAAG-------------------------------------------------TTGATCGAAGAACATATGCATACTATGTTTATAGAAATCGGAAATTCT-TTA----GTTTT-TT------------GTTTTGTGTTTATTAATGAAGACCGAATCCAAGTTCCAATTTCCAAT---------------------------------TTG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGC-----------TTTTCAATTTATAATTTT---------------------------------------------------------------------------------------------------------------------CGATCACAAT--TTTTTTTTCGGTTTCTGTAT-TGTGCACAAAG---AAAACAAAA
dp5 4_group5:1827400-1827641 - ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGACAAC-----------TA-CCACTACCAC----------------------TCGTAGATACAAGCCAATAGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTCAAATCACACAAATTTTTGGTTCTGTCT--TTGGAGCACACAAGAAATAGAAAAAGAAAAAGAGCAAGCAGC---------------------------------------------------------------------------------------------------CAC
droPer2 scaffold_5:6232944-6233185 - ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGAGAAC-----------TA-CCACTACCAC----------------------TCGTAGATACAAGCCAATAGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTCAAATCACACAAATTTTTGGTTCTGTCT--TTGGAGCACACAAGAAATAGAAAAAGAAAAAGAGCAAGCAGC---------------------------------------------------------------------------------------------------CAC
droAna3 scaffold_13337:4240017-4240218 - -CGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAATAATAATAACAAC-------------------------------------------------------------------------------------------------------------------AAAAACACTAACTAACACAACAAAAACAGACA-----------------------------------------------------------------GTACACATGAC-----AACA
droBip1 scf7180000395450:370673-370866 - GCGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCATAACCCGCTCAGCAATACACAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAATAATAATAATAAC-------------------------------------------------------------------------------------------------------------------AACAACA---------ACAACATAAACAAACC-----------------------------------------------------------------ATACTAACTAA-----AACA
droKik1 scf7180000302808:31610-31814 + ACAGCCGCCACTTCGCA-------------------------------T--------------------------------------------------GAACGGACTCAGCCGTGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATCTGAAA--AG---TCGCCGGAAAACATGTAGCC---------------------------------------------------------------------------------------------------------------------------------------------------GT-----AGTTTTATTGGTAGTTGTACCCGTAG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTT--------------------------------------TATT--TAG--------------------------------------------------------AAACAGCCACAAATACATCCATACATAT--GTAA----A--TATATTT--------TGTAT-T-------------------ATG
droFic1 scf7180000453807:327876-328095 + GCGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCACAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAG-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAACAATAACAACCACAGAGAC-AGACAGCACA-----------------------------------------------------------------------TGA--------------------------------------------------------CAACAACAACAAA---AACCA----TGAACGAAAACAA------AC----------------------CAAGTATA-----GCTA
droEle1 scf7180000491193:4553848-4554093 - ACAACAACAACAGCAACAGG----------------------------T--------------------------------------------------G--------CAAC--AATTGGC-----------------------------CGG-----------------------------------------TGGCGGTGAATCCAGC---TACAACTCAC----------------------------------------------------AGC--AGAACATGTCTGGAGT------------------------GGCGGATGTGGGCTATGCCAGTGCATCAT---------------CGGGCGCAGCTGCC----------------------------------------------------------------------------------------AACGCGGAGAACTTTAAAGTAGGTGCTA-------------GCCGAAAACTCGGT-CT------------------------------------------------A-----------------------------------------TTTCCTTCC---------------ATGTTTAAAGAAATTGGAGTTCCAGTTTTATTT--TCAA----------------------------------------CAGATAAAATAAAAC----------TCA---AGAAA----TAA-----------------------------------------------G-----TTAT
droRho1 scf7180000758409:765-984 - GCAACAACAACTGCAGC-------------------------------A--------------------------------------------------A--C---------------------AACAGCTACAGCAG------------------------------------------------------------------------------------------CAACA------ACTGCAGCAGCAGCAATTGCAACAGCAACAACAGGC-------------------------------------------------------AGCTCAGTCAGTGCCCTGGC-----------GT-ACACAGCGCG----------------------TTCAGCCTGCAGCACAACAGGAATTGCAT-----CCGCAGC------------------------------------------------------------------C-CAT-----------------------------------------------------------------------------------------------------------TTACAACAATGTTCAG------CAACAGCAGCAGCAACAAAGATCTCGCGATGTCT--TCAGTCC---------------------------------------------------------------------------------------------------------------A-----GCAAGGACTGA-----AACA
droBia1 scf7180000301506:203329-203453 + TCAGCAGCTGTTGGCC--------------------------------------------------------------------------------------CAGAGTCAGTTGCAGCAGCAA---------------------------CAG-----------------------------------------CAGCAGCAGCACCATCAGCAGCAACAACA-------------------------------------------------GGCAGC--AG-------------------------------------------------------CAGCCGCAGCAG---------------CGGCAGCAGCAGCC-----------GGAGTGC-------------------------------ATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---AACATGGGG
droTak1 scf7180000415765:1176491-1176691 + ACAGCAGCATACGCAACAGATATTACCAGCTGGCTTGGTAAATGGCAATGGCAGCGGCAACATGATGCAAGTAACCAATCTGCATCTGCAACAGCAGCAG--C------AAC--A-GCAACAA---------------------------CAG-----------------------------------------CAGCAGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAGCCAGCAGCAGCA--------------------------------------------------------------------------------------TA--TATT------TGT------------------------------------------------C----TGCCCCACC--------------------------------------------------------AG---------------------------------------------------------------------------------------------------------------------CAACCAGCAA--CTCCTTC--------TGCAA-CACCAACAG-CAGC-----AGCA
droEug1 scf7180000409561:120449-120525 - ACAACCGCCACT---------------------------------------------------------------------------------------GAACGGAGTCGGCCGTGTCGGCGG---------------------------AGG-----------------------------------------TGGCGGTGAGTCCACCACATATATCTGACA--AA---TTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:24063657-24063789 + ATCACCAAC--TGCAGC-------------------------------A--------------------------------------------------G--C---------------------AGCATTCACACAACCAGCATCAGCAGCAG-----------------------------------------CAGCACTATATCCACCAACTGTACT-ATCCATCG---CACTGGGTGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCAGGT-----------AGCAAAC-------------------------------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----AGCA
droSim2 2r:19308989-19309119 + ACAACCAGCGTTCC-CC-------------------------------T--------------------------------------------------GGGCAGCGGTGGC--AACCTACAG---------------------------CAG-----------------------------------------CAGCAGCAAATCAACCAGCAGCAACAAAT-------------------GTACATGCAGCACATGCAGCAGCA-------------------------------------------------------------------------------------------------------TCAGCACAT-----------GCAAAAC-------------------------------ATGC-G----------------------------------------------------------------------GC-ACAATTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----CTAT
droSec2 scaffold_21:173860-173993 - ACCGCCCCCGCTGCCCG-------------------------------T--------------------------------------------------TACCGTGGCAA-------------CATTGCCCACTCAGGCGGCGACAGCAGCAGCAGCAACAGCTGCGATTTTGG------------CCACTCAC----------------------------------CAGCA------ACAGCAGCAGCAGCAATTGCAGCAGCA-------------------------------------------------------------------------------------------------------TCTGC---A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-----AGCA
droYak3 X:18714300-18714488 - ACAGCAGCAACAACAGC-------------------------------A--------------------------------------------------G--CAACAGCAGCAGCAACAGCAG---------------------------CAG-----------------------------------------CAGCAACAACAGCAGCAGCAACATCAGCA-------------------------------------------------------------------------------------------------------------------GTATGTG-CAAC-----------TA-CAGCAGCAACATTT-----------GGTGACC--AG-----CGATTCGGCGGCAGCTGTTCCCATCC-CGT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGACC-TTCAGTTTGA-------------------------------------------------TACCCTGAATAA--------------------------------------------------------TAACAACAACAAC---AGC--------------------------------------------------------A-----ATAA
droEre2 scaffold_4784:14834786-14835092 + ATAGCCGCCACCATGAC-------------------------------G--------------------------------------------------A-----------------------CATCCACAACGACAACGGCGCCGACGGCAGCGGCCACCTCGGCAGGTGTCGCACTCACGGGGAACAAGCAA----------------------------------CATCA------GCAGCAGCAGCAGCAGCAGCAGCAGCA-------------------------------------------------------------------------------------------------------GCAGC---A-----------CAAGAGT-------------------------------GCGGCAGATGCGGCGCATCACTTTCATAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGTAGCACAATAACAATAACAACCAC-------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------CACAGACAGA---C-----AGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATTTGACC--AG---CAGCAGATGTAGCTGCTGCTG--------------------------------------------------------------------------------------CAGTGCC------------------------GCAGCTGGC-----------TTAGAGC-------------------------------ATAG-AGCAT-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----TACCCTACCAATAT-TTACAACACACT-TTTAATTTGT-------------------------------------------------TTTCCTT--TTG--------------------------------------------------------AAACAACAACAAA---AGCAA----TAAGTTATCACAAA--TTCGTTT--------TGTAA-TGTGCACAAACAGA-----AACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGGC-----------TTAGAGC-------------------------------ATA...................................................................................................................................................................................................................................................................................................................................................................................................1912.002100001
.........ACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTT--TTG--------------------------------------------------------AAACAACAACAAA---.....................................................................2111.001100000
..............GCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................AGATGTAGCTGCTGCTG--------------------------------------------------------------------------------------CAGTGCC------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------CAGTGCC------------------------GCAGCTGGC-----------TTAGAGC-------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATCACAAA--TTCGTTT--------T............................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACT-TTTAATTTGT-------------------------------------------------TTTCCTT--T...............................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................TG--------------------------------------------------------------------------------------CAGTGCC------------------------GCAGCTGGC-----------TTAGAGC-------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------CAGTGCC------------------------GCAGCTGGC-----------TTAGAGC-------------------------------AT....................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAAA---AGCAA----TAAGTTATCACA................................................2911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGGC-----------TTAGAGC-------------------------------ATAG-AGCAT-------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACACACT-TTTAATTT............................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----TACCCTACC.......................................................................................................................................................................................................................................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................GGC-----------TTAGAGC-------------------------------ATAG-AGCAT-------------------------------------------------------------------AG-AG....................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTT--TTG--------------------------------------------------------AAACAACAACAAA---AGC..................................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA----TAAGTTATCACAAA--TTCGT.......................................2411.001100000
.........................................................................................................................................................................................................................TTTGACC--AG---CAGCAGATGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTT--------TGTAA-TGTGCACA...............2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----TACCCTAC........................................................................................................................................................................................................................................2411.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATAG-AGCAT-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----T...............................................................................................................................................................................................................................................2311.001100000
........................................................................................................GACTTAGCCGAGTCGGCGG---------------------------CGG-----------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TAAGTTATCACAAA--TTCGTTT--------T............................2311.001100000
..............GCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------------------------------------------------------------------AG-AGCTTAGT-------CT------------------------------------------------A----TACCCTACCA......................................................................................................................................................................................................................................2511.001000001
...............CA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TACCCTACCAATAT-TTACA............................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................GC-------------------------------ATAG-AGCAT-------------------------------------------------------------------AG-AGCTTA................................................................................................................................................................................................................................................................................................................1911.001100000
droVir3
ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGGGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATATGACC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTTAGATTTGAT-CTAGTTTATATCCA---------------------------------------------------------------------TTTGATTTGTTTTATTTCA-----AC-AACAAAAATTTG---------------------------------------------------------------------------------------------------------------------ATATCACAAA--TTTGTTT--------TCTAA-TGTGCACAAA---A-----ATCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................GGACTTAGCCGGGTCGGCGG---------------------------CGG-----------------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.005000201000020000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GACC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTTAGATTTGAT-CT.....................................................................................................................................................................................................................................................................................................2813.003000000000000000000000000000000000000000000000000000000000000003
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAT-CTAGTTTATATC...........................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTGTTTTATTTCA-----AC-AACA.....................................................................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAA--TTTGTTT--------TCTAA-TGT....................2311.001001000000000000000000000000000000000000000000000000000000000000
................A-------------------------------T--------------------------------------------------GAACGGACTTAGCCGGGTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTTGTTT--------TCTAA-TGTGCACA...............2111.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTTAGATTTGAT-CTAGT..................................................................................................................................................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
............ACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGC-GTGCTTAGATTTGAT-CT.....................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTATTTCA-----AC-AACAAAAAT................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................GACTTAGCCGGGTCGGCGG---------------------------CGG-----------------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................GAACGGACTTAGCCGGGTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAA--TTTGTTT--------TCTAA-TGTG...................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTGTTTTATTTCA-----AC-AACAAAA..................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATGACC--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTT.................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATTTG---------------------------------------------------------------------------------------------------------------------ATATCACAA...............................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC-GTGCTTAGATTTGAT-C......................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------TCTAA-TGTGCACAAA---A-----AT..2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTAGATTTGAT-CTAGT..................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGC-GTGCTTAGATTTGAT-C......................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGC-GTGCTTAGATTTGAT-C......................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
droGri2
ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTTAGCCGAGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATCTGACC--AA---CAGCA------------GTAGCA----------------------------------------------------------------------------------------------G---------------TAGCAGCAGCACCT-----------GGCCAAT-------------------------------A------ATG------------------------------------------------------------------GC-CTGCTTAGT-------TT------------------------------------------------T----TATCCTAGTA---TCC--TAGTTAACTCTTTGATTTGTTTTTATT-------------------TAT---------------------------------------------------------------------------------------------------------------------CTATCACAAAAATTGCTTT--------TGTAATTGTGCACAAA---G-----GTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
-CAGCAGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCGTATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTAAG-------------------------------------------------TTGATCGAAGAACATATGCATACTATGTTTATAGAAATCGGAAATTCT-TTA----GTTTT-TT------------GTTTTGTGTTTATTAATGAAGACCGAATCCAAGTTCCAATTTCCAAT---------------------------------TTG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGC-----------TTTTCAATTTATAATTTT---------------------------------------------------------------------------------------------------------------------CGATCACAAT--TTTTTTTTCGGTTTCTGTAT-TGTGCACAAAG---AAAACAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.CAGCAGCCACTACGCA-------------------------------T--------------------------------------------------GAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
..............GCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
............ACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210001
......................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGTTCCAATTTCCAAT---------------------------------T....................................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
........................................................................................................................................................................................................................................................................................................ATGTTTATAGAAATCGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT-TGTGCACAAAG---AAAACAAAA2412.00200200
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAAGACCGAATCCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........CTACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAT---------------------------------TTG-CGATG-------------------------------------------------------------------CG-T.....................................................................................................................................................................................................................................................................................................................1811.00100010
.CAGCAGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
............ACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGGTTTCTGTAT-TGTGCAC................2411.00100010
............................................................................................................................................................................................................................................................................................................................................................GTTTTGTGTTTATTAATGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------T......................................................................................................................................................................................................................................................................................................1811.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAT-TGTGCACAAAG---AAAACAAA.2711.00100010
..............GCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCGTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........................................................................................................TTGAGCCGTATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010
.............CGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
............................................................................................................................................................................................................................AAG-------------------------------------------------TTGATCGAAGAACATATGCATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..........................................................................................................................................................................................................................................................................................................................................................................AATGAAGACCGAATCCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGC-----------T..............................................................................................................................................................................................2011.00100010
.....................................................................................................................................................................................................................................................................................CGAAGAACATATGCATACTATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.CAGCAGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................GAACGGATTGAGCCGTATCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................................................................................................................................................................................................................TAAG-------------------------------------------------TTGATCGAAGAACATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................................................................................................................................................................................................................................................................................................................................................AATGAAGACCGAATCCAAGTTCCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
....CAGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.....................................................................................................................................................................................................................................................................................................ACTATGTTTATAGAAATCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------TTG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGC-----------T..............................................................................................................................................................................................2611.00100010
.............................................................................................................................................................................................................................................................................................................TATAGAAATCGGAAATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.......................................................................................................GGATTGAGCCGTATCGGCGG---------------------------CGG-----------------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGC-----------TTTT...........................................................................................................................................................................................1911.00101000
...................................................................................................................................................................................................................................................................................................................................................................GTTTATTAATGAAGACCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
........................................................................................................................................................................................................................................................................................................ATGTTTATAGAAATCGGAAATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.............................................................................................................................................................................................................................AG-------------------------------------------------TTGATCGAAGAACATATGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
...................................................................................................................................................................................................................................................................................................ATACTATGTTTATAGAAATCGGAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...............................................................................................................................................................................................................................................................................................ATGCATACTATGTTTATAGAAATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..........................................................................................................................................................................................................................................................................................................................................................................AATGAAGACCGAATCCAAGTTCCAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGTAT-TGTGCACAAAG---AA.......2311.00100010
.............CGCA-------------------------------T--------------------------------------------------GAACGGATTGAGCCGTATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................CCAAT---------------------------------TTG-CGATG-------------------------------------------------------------------CG-TGCTTA................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAT-TGTGCACAAAG---A........2011.00100100
...........................................................................................................................................................................................................................................................................................................................ATTCT-TTA----GTTTT-TT------------GTTTTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TTTTTTTTCGGTTTCTGTAT-TGT....................2611.00100010
......................................................................................................................................................................................................................................................................................................................................................................TATTAATGAAGACCGAATCCAAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........................................................................................................ATTGAGCCGTATCGGCGG---------------------------CGG-----------------------------------------TGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.................................................................................................................................................................................................................................................................................................GCATACTATGTTTATAGAAATCGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........CACTACGCA-------------------------------T--------------------------------------------------GAACGGATTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
dp5
ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGACAAC-----------TA-CCACTACCAC----------------------TCGTAGATACAAGCCAATAGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTCAAATCACACAAATTTTTGGTTCTGTCT--TTGGAGCACACAAGAAATAGAAAAAGAAAAAGAGCAAGCAGC---------------------------------------------------------------------------------------------------CACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................A-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000004
..............................................................................................................................................................................................................................................................................................................................................................................................................GTAGATACAAGCCAATAGAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGATACAAGCCAATAGAAGTAGT..........................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100001000
..........................................................................................................................................................................................................................CTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGACAAC-----------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................CAC----------------------TCGTAGATACAAGCCAATAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------T............................................................................................................................................................................................................2611.0010100000000
................................................T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTCTGTCT--TTGGAGCA........................................................................................................................................2111.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--TTGGAGCACACAAGAAATAG............................................................................................................................2211.0010000100000
...........TACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
......GCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAAAAAGAAAAAGAGCAAGC.........................................................................................................2311.0010010000000
............ACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGGTTCTGTCT--TTGGA...........................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTCAAATCAC......................................................................................................................................................................2711.0010010000000
.................................................................................................................................................................................................................................................................................................................................................................................ACCAC----------------------TCGTAGATACAAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........ACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAAGAAAAAGAGCAAGCAGC---------------------------------------------------------------------------------------------------C..2511.0010001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAAATTTTTGGTTCTGTCT--TTGGA...........................................................................................................................................2811.0010010000000
...................................................................................................GAACGGACTGAGCCGAATCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTCTGTCT--TTGGAGCACA......................................................................................................................................2311.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTTGGTTCTGTCT--TTGGAGC.........................................................................................................................................2511.0010010000000
.CAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................................................................................................................................ATCCGACAAC-----------TA-CCACTACCAC----------------------TCGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------.............................................................................................................................................................................................................1811.0010000100000
.................................................................................................................GAATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-........................................................................................................................................................................................................................................................................................................................1911.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTTTTGGTTCTGTCT--TTGGAG..........................................................................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................T-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TG...........................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCT--TTGGAGCACACAAGA.................................................................................................................................1911.0010000100000
.......................................................................................................GGACTGAGCCGAATCGGCGG---------------------------CGG-----------------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAAATTTTTGGTTCT......................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATAGAAAAAGAAAAAGA...............................................................................................................2011.0010000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTT............................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCT--TTGGAGCACACAAGAA................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................TATCCGACAAC-----------TA-CCACTACCAC----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
.............CGCA-------------------------------T--------------------------------------------------GAACGGACTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
..........CTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
..............GCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-GAT.....................................................................................................................................................................................................................................................................................................................2311.0010000010000
...................................................................................................GAACGGACTGAGCCGAATCGGCGG---------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
...............CA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000100
...............CA-------------------------------T--------------------------------------------------GAACGGACTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.0010000000001
.......................................................................................................GGACTGAGCCGAATCGGCGG---------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
ACAGCCGCCACTACGCA-------------------------------T--------------------------------------------------GAACGGACTGAGCCGAATCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGAGAAC-----------TA-CCACTACCAC----------------------TCGTAGATACAAGCCAATAGAAGTAGTTT-----CCAGATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTCAAATCACACAAATTTTTGGTTCTGTCT--TTGGAGCACACAAGAAATAGAAAAAGAAAAAGAGCAAGCAGC---------------------------------------------------------------------------------------------------CACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................GAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
..........................................................................................................................................................................................................................................................................................................................................ATCTGAA-CTATCCGAGAAC-----------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
..................................................................................................................................................................................................................ATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................................................................................................................................................................................................................................................................................................................................TGAA-CTATCCGAGAAC-----------TA-CCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.............................................................................................................................................................................................................................................................................................................................................TGAA-CTATCCGAGAAC-----------TA-CCACTACCAC----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................................................................................................................................CCACCATATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
............................................................................................................................................................................................................................................................................................................................................CTGAA-CTATCCGAGAAC-----------TA-CC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCACACAAATTTTTGGTTCTGT....................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................ATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTAGATACAAGCCAATAGAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGGTTCTGTCT--TTGGA...........................................................................................................................................2111.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG------------------------------------------------------------------C-GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------T..............................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................GAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................ATATATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................GAACGGACTGAGCCGAATCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTTCT------TAATTTC.............................................................................................................................................................................2811.001010000
.........ACTACGCA-------------------------------T--------------------------------------------------GAACGGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAGCCAATAGAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........................................................................................................................................................................................................................ATCTGAC-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTTCTGTCT--TTGGAGC.........................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................C-----------------------------------------------------------------------------------------------------------ATCTGAA-CTATCCGAGAAC-----------TA-CCACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........CACTACGCA-------------------------------T--------------------------------------------------GAACGGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droAna3
-CGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAATAATAATAACAAC-------------------------------------------------------------------------------------------------------------------AAAAACACTAACTAACACAACAAAAACAGACA-----------------------------------------------------------------GTACACATGAC-----AACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTCAAACTTGGC-CAAGAAGGTGCT...........................................................................................................................................................................................................................................................................................2711.001000001
droBip1
GCGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCATAACCCGCTCAGCAATACACAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAATAATAATAATAAC-------------------------------------------------------------------------------------------------------------------AACAACA---------ACAACATAAACAAACC-----------------------------------------------------------------ATACTAACTAA-----AACASizeHit CountTotal NormTotal
No Reads
droKik1
ACAGCCGCCACTTCGCA-------------------------------T--------------------------------------------------GAACGGACTCAGCCGTGTCGGCGG---------------------------CGG-----------------------------------------TGGCGGTGAGTCCACCATTTATATCTGAAA--AG---TCGCCGGAAAACATGTAGCC---------------------------------------------------------------------------------------------------------------------------------------------------GT-----AGTTTTATTGGTAGTTGTACCCGTAG-CGATG-------------------------------------------------------------------CG-TGCTTAGT-------TC------------------------------------------------T---------------------------------------TGT-----------TTT--------------------------------------TATT--TAG--------------------------------------------------------AAACAGCCACAAATACATCCATACATAT--GTAA----A--TATATTT--------TGTAT-T-------------------ATGSizeHit CountTotal NormTotal
No Reads
droFic1
GCGGCAGATGCGGCGCA-------------------------------T--------------------------------------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCACAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAG-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGAAGCACAATAACAATAACAACCACAGAGAC-AGACAGCACA-----------------------------------------------------------------------TGA--------------------------------------------------------CAACAACAACAAA---AACCA----TGAACGAAAACAA------AC----------------------CAAGTATA-----GCTASizeHit CountTotal NormTotal
No Reads
droEle1
ACAACAACAACAGCAACAGG----------------------------T--------------------------------------------------G--------CAAC--AATTGGC-----------------------------CGG-----------------------------------------TGGCGGTGAATCCAGC---TACAACTCAC----------------------------------------------------AGC--AGAACATGTCTGGAGT------------------------GGCGGATGTGGGCTATGCCAGTGCATCAT---------------CGGGCGCAGCTGCC----------------------------------------------------------------------------------------AACGCGGAGAACTTTAAAGTAGGTGCTA-------------GCCGAAAACTCGGT-CT------------------------------------------------A-----------------------------------------TTTCCTTCC---------------ATGTTTAAAGAAATTGGAGTTCCAGTTTTATTT--TCAA----------------------------------------CAGATAAAATAAAAC----------TCA---AGAAA----TAA-----------------------------------------------G-----TTATSizeHit CountTotal NormTotal
No Reads
droRho1
GCAACAACAACTGCAGC-------------------------------A--------------------------------------------------A--C---------------------AACAGCTACAGCAG------------------------------------------------------------------------------------------CAACA------ACTGCAGCAGCAGCAATTGCAACAGCAACAACAGGC-------------------------------------------------------AGCTCAGTCAGTGCCCTGGC-----------GT-ACACAGCGCG----------------------TTCAGCCTGCAGCACAACAGGAATTGCAT-----CCGCAGC------------------------------------------------------------------C-CAT-----------------------------------------------------------------------------------------------------------TTACAACAATGTTCAG------CAACAGCAGCAGCAACAAAGATCTCGCGATGTCT--TCAGTCC---------------------------------------------------------------------------------------------------------------A-----GCAAGGACTGA-----AACASizeHit CountTotal NormTotal
No Reads
droBia1
TCAGCAGCTGTTGGCC--------------------------------------------------------------------------------------CAGAGTCAGTTGCAGCAGCAA---------------------------CAG-----------------------------------------CAGCAGCAGCACCATCAGCAGCAACAACA-------------------------------------------------GGCAGC--AG-------------------------------------------------------CAGCCGCAGCAG---------------CGGCAGCAGCAGCC-----------GGAGTGC-------------------------------ATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---AACATGGGGSizeHit CountTotal NormTotal
No Reads
droTak1
ACAGCAGCATACGCAACAGATATTACCAGCTGGCTTGGTAAATGGCAATGGCAGCGGCAACATGATGCAAGTAACCAATCTGCATCTGCAACAGCAGCAG--C------AAC--A-GCAACAA---------------------------CAG-----------------------------------------CAGCAGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAGCCAGCAGCAGCA--------------------------------------------------------------------------------------TA--TATT------TGT------------------------------------------------C----TGCCCCACC--------------------------------------------------------AG---------------------------------------------------------------------------------------------------------------------CAACCAGCAA--CTCCTTC--------TGCAA-CACCAACAG-CAGC-----AGCASizeHit CountTotal NormTotal
No Reads
droEug1
ACAACCGCCACT---------------------------------------------------------------------------------------GAACGGAGTCGGCCGTGTCGGCGG---------------------------AGG-----------------------------------------TGGCGGTGAGTCCACCACATATATCTGACA--AA---TTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATCACCAAC--TGCAGC-------------------------------A--------------------------------------------------G--C---------------------AGCATTCACACAACCAGCATCAGCAGCAG-----------------------------------------CAGCACTATATCCACCAACTGTACT-ATCCATCG---CACTGGGTGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCAGGT-----------AGCAAAC-------------------------------AAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----AGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................ACTGTACT-ATCCATCG---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GTGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
...........................................................................................................................................AGCATCAGCAGCAG-----------------------------------------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCAGGA-----------............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................CAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TGCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................GCAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................CAGCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................AGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCAGCAACAGCA----------------------------------------------------------------------------------------------A---------------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
ACAACCAGCGTTCC-CC-------------------------------T--------------------------------------------------GGGCAGCGGTGGC--AACCTACAG---------------------------CAG-----------------------------------------CAGCAGCAAATCAACCAGCAGCAACAAAT-------------------GTACATGCAGCACATGCAGCAGCA-------------------------------------------------------------------------------------------------------TCAGCACAT-----------GCAAAAC-------------------------------ATGC-G----------------------------------------------------------------------GC-ACAATTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----CTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
ACCGCCCCCGCTGCCCG-------------------------------T--------------------------------------------------TACCGTGGCAA-------------CATTGCCCACTCAGGCGGCGACAGCAGCAGCAGCAACAGCTGCGATTTTGG------------CCACTCAC----------------------------------CAGCA------ACAGCAGCAGCAGCAATTGCAGCAGCA-------------------------------------------------------------------------------------------------------TCTGC---A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-----AGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ACAGCAGCAACAACAGC-------------------------------A--------------------------------------------------G--CAACAGCAGCAGCAACAGCAG---------------------------CAG-----------------------------------------CAGCAACAACAGCAGCAGCAACATCAGCA-------------------------------------------------------------------------------------------------------------------GTATGTG-CAAC-----------TA-CAGCAGCAACATTT-----------GGTGACC--AG-----CGATTCGGCGGCAGCTGTTCCCATCC-CGT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGACC-TTCAGTTTGA-------------------------------------------------TACCCTGAATAA--------------------------------------------------------TAACAACAACAAC---AGC--------------------------------------------------------A-----ATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................AGCAACAGCAG---------------------------CAG-----------------------------------------CAGCAACAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.2024000000000024
..........................................................................................................................G---------------------------CAG-----------------------------------------CAGCAACAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
...............GC-------------------------------A--------------------------------------------------G--CAACAGCAGCAGCAACAGCAG---------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
..........................................................................................................................................................................................................ACAGCAGCAGCAACATCAGCA-------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.07101000000000
......GCAACAACAGC-------------------------------A--------------------------------------------------G--CAACAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27180.06101000000000
..............................................................................................................GCAGCAACAGCAG---------------------------CAG-----------------------------------------CAGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.......................................................................................................................GCAG---------------------------CAG-----------------------------------------CAGCAACAACAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
.................................................................................................................GCAACAGCAG---------------------------CAG-----------------------------------------CAGCAACAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
........................................................................................................................................................G-----------------------------------------CAGCAACAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100000000
droEre2
ATAGCCGCCACCATGAC-------------------------------G--------------------------------------------------A-----------------------CATCCACAACGACAACGGCGCCGACGGCAGCGGCCACCTCGGCAGGTGTCGCACTCACGGGGAACAAGCAA----------------------------------CATCA------GCAGCAGCAGCAGCAGCAGCAGCAGCA-------------------------------------------------------------------------------------------------------GCAGC---A-----------CAAGAGT-------------------------------GCGGCAGATGCGGCGCATCACTTTCATAACCCGCTCAGCAATACGCAGTGCAATGAAGTAAATCCCACAATTTATGAA-GAGCTCAAACTTGGC-CAAGAAGGTGCTGGATTTAAGAAACTTGTGCCATAAACGTAGCACAATAACAATAACAACCAC-------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------CACAGACAGA---C-----AGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................C-------------------------------G--------------------------------------------------A-----------------------CATCCACAACGACAACGGCGCCGACGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3114.0040000004
........................................................................................................................................................................GTGTCGCACTCACGGGGAACAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
......................................................................................................................................................................................................................................................................AGCA-------------------------------------------------------------------------------------------------------GCAGC---A-----------CAAGAGT-------------------------------GCGGCAGATGC...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATGAA-GAGCTCAAACTTGGC-C......................................................................................................................................................................................................................................................................................................2611.0010100000
................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000050
....................................................................................................................................................................................................................................CATCA------GCAGCAGCAGCAGCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28180.0610000010
......................................................................................................................................................................................................................................TCA------GCAGCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
...............................................................................................................................................................................................CAA----------------------------------CATCA------GCAGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000

Generated: 05/18/2015 at 12:41 AM