ID:

dmo_1532

 Coordinate:

scaffold_6500:12597644-12597794 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.3 -3.1 -3.0

Flybase annnotation

CDS [Dmoj\GI11759-cds]; exon [dmoj_GLEANR_1183:7]; intron [Dmoj\GI11759-in]

Repeatable elements

NameClassFamilyStrand
Helitron1_DmojRCHelitron-
Helitron1_DmojRCHelitron-
Helitron1_DmojRCHelitron-
mature
  1. scaffold_6468:39155-39181 +
  2. dmo_1532  scaffold_6500:12597730-12597756 -
  3. scaffold_6540:1066595-1066621 +
  4. scaffold_6541:2235361-2235387 +
star
  1. scaffold_270:733-757 +
  2. scaffold_2026:4085-4109 +
  3. scaffold_2743:1453-1477 +
  4. scaffold_6175:1027-1051 +
  5. scaffold_6333:37387-37411 +
  6. scaffold_6473:16916079-16916103 +
  7. scaffold_6495:82646-82670 +
  8. scaffold_6496:17599511-17599535 +
  9. scaffold_6496:24239697-24239721 +
  10. scaffold_6498:2403652-2403676 +
  11. scaffold_6500:3649905-3649929 +
  12. scaffold_6500:29918642-29918666 +
  13. scaffold_6501:531073-531097 +
  14. scaffold_6540:1241713-1241737 +
  15. scaffold_6540:29233045-29233069 +
  16. scaffold_6540:32776351-32776375 +
  17. scaffold_6540:33151659-33151683 +
  18. scaffold_6541:763895-763919 +
  19. scaffold_6541:1433999-1434023 +
  20. scaffold_6680:23698536-23698560 +
  21. scaffold_1888:1453-1477 -
  22. scaffold_3016:11727-11751 -
  23. scaffold_4423:10000-10024 -
  24. scaffold_4427:13901-13925 -
  25. scaffold_4539:503-527 -
  26. scaffold_6473:7392869-7392893 -
  27. scaffold_6482:73146-73170 -
  28. scaffold_6482:346950-346974 -
  29. scaffold_6482:527519-527543 -
  30. scaffold_6491:95876-95900 -
  31. scaffold_6498:3116302-3116326 -
  32. scaffold_6498:3290529-3290553 -
  33. scaffold_6500:4944419-4944443 -
  34. scaffold_6500:26869588-26869612 -
  35. scaffold_6500:29698387-29698411 -
  36. scaffold_6500:32159780-32159804 -
  37. scaffold_6540:6870258-6870282 -
  38. scaffold_6540:25109467-25109491 -
  39. scaffold_6540:33373299-33373323 -
  40. scaffold_6680:2284957-2284981 -
  41. scaffold_2028:12562-12586 +
  42. scaffold_2473:4431-4455 +
  43. scaffold_2484:269-293 +
  44. scaffold_2585:984-1008 +
  45. scaffold_4074:4470-4494 +
  46. scaffold_6359:1695702-1695726 +
  47. scaffold_6473:3676801-3676825 +
  48. scaffold_6473:11229688-11229712 +
  49. scaffold_6482:2334110-2334134 +
  50. scaffold_6496:2763956-2763980 +
  51. scaffold_6496:26055363-26055387 +
  52. scaffold_6497:193191-193215 +
  53. scaffold_6498:2274744-2274768 +
  54. scaffold_6500:4495883-4495907 +
  55. scaffold_6500:6329802-6329826 +
  56. scaffold_6500:22129923-22129947 +
  57. scaffold_6500:23008442-23008466 +
  58. scaffold_6540:740710-740734 +
  59. scaffold_6540:1130970-1130994 +
  60. scaffold_6540:32784884-32784908 +
  61. scaffold_154:1240-1264 +
  62. scaffold_475:1130-1154 +
  63. scaffold_2453:3676-3700 +
  64. scaffold_2704:1144-1168 +
  65. scaffold_5033:4065-4089 +
  66. scaffold_6344:3373-3397 +
  67. scaffold_6386:10536-10560 +
  68. scaffold_6405:74297-74321 +
  69. scaffold_6422:1935-1959 +
  70. scaffold_6473:16566341-16566365 +
  71. scaffold_6482:1162009-1162033 +
  72. scaffold_6482:1383284-1383308 +
  73. scaffold_6498:2026604-2026628 +
  74. scaffold_6500:17819094-17819118 +
  75. scaffold_6540:589178-589202 +
  76. scaffold_6540:926842-926866 +
  77. scaffold_6541:1730809-1730833 +
  78. scaffold_6541:1763478-1763502 +
  79. scaffold_6541:1990412-1990436 +
  80. scaffold_6680:23809096-23809120 +
  81. scaffold_768:6858-6882 -
  82. scaffold_1780:17000-17024 -
  83. scaffold_1929:2329-2353 -
  84. scaffold_3920:7853-7877 -
  85. scaffold_4354:7428-7452 -
  86. scaffold_5779:9822-9846 -
  87. scaffold_5784:3268-3292 -
  88. scaffold_6473:16075329-16075353 -
  89. scaffold_6482:66926-66950 -
  90. scaffold_6482:510171-510195 -
  91. scaffold_6496:2548889-2548913 -
  92. scaffold_6496:7816861-7816885 -
  93. scaffold_6496:26735239-26735263 -
  94. scaffold_6498:3223898-3223922 -
  95. dmo_1532  scaffold_6500:12597699-12597723 -
  96. scaffold_6500:29642407-29642431 -
  97. scaffold_6540:47831-47855 -
  98. scaffold_6541:2304894-2304918 -
  99. scaffold_6680:16793280-16793304 -
  100. scaffold_6680:23044979-23045003 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGTACTGTTATCTCTTTCTAAAAACTGACCAAAAATGAGGTGTCTACGCCTAGTTGGGGCGTGGCAAATCGGAAAAACCTGTATATTCTGCAGTATTAGAGCGAAACTTAACTACTAAATTGTTGATGGGATGTGAATGAGTATTCCGCAGTCGGTAACGCCCGACTGCAACGTTCTTACTTGTTTTTTTTATCTTTGCAGCAAATTCGAAGAAGCCATGGAGGTTTGTTCACATGGAAGCACAATACCAA
****************************************************************************************.(((((.((((((..........)).))))))))).......................********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V049
head
........................................................................................TGCAGTATTAGAGCGAAACTTAACTAC........................................................................................................................................ 27 0 4 4.75 19 19 0 0 0
.............................................................................................TATTAGAGCGAAACTTAACTACT....................................................................................................................................... 23 0 20 2.60 52 0 52 0 0
.........................................................................................................................GTTGATGGGATGTGAATGAGTATTC......................................................................................................... 25 0 20 1.05 21 0 0 21 0
...................................................................................TATTCTGCAGTATTGGAGCGA................................................................................................................................................... 21 1 6 1.00 6 0 1 5 0
........................................................................................TGCAGTATTAGAGCGAAGCTTAACTAC........................................................................................................................................ 27 1 8 0.38 3 3 0 0 0
........................................................................................TGCAGTATTAGAGCGAAACTTAAC........................................................................................................................................... 24 0 6 0.33 2 1 1 0 0
........................................................................................TGCAGTATTAGAGCGAAACTTAACT.......................................................................................................................................... 25 0 6 0.33 2 1 1 0 0
........................................................................................TGCAGTATTAGAGCGAAACTTAACTA......................................................................................................................................... 26 0 4 0.25 1 0 0 1 0
...................................................................................TATTCTGCAGTGTTGGAGCGA................................................................................................................................................... 21 2 8 0.25 2 0 1 1 0
........................................................................AAAAACCTGTATATTCTGCAG.............................................................................................................................................................. 21 0 4 0.25 1 0 1 0 0
.......................................................................................CTGCAGTATTAGAGCGAAACTTAA............................................................................................................................................ 24 0 5 0.20 1 0 1 0 0
...................................................................................TATTCTGCAGTATTAGAGCGA................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0
...................................................................................TGTTCTGCAGTATTGGAGCGA................................................................................................................................................... 21 2 11 0.18 2 0 0 2 0
........................................................................................TGCTGTATTAGAGCGAAACTTAACTAC........................................................................................................................................ 27 1 6 0.17 1 1 0 0 0
.................................................................................TATATTCTGCAGTATTGGAGC..................................................................................................................................................... 21 1 6 0.17 1 0 0 0 1
............................................................................................................................GATGGGATGTGAATGAGTATTCC........................................................................................................ 23 0 20 0.15 3 0 3 0 0
..................TAAAAACTGACCAAAAATGAGGTGTC............................................................................................................................................................................................................... 26 0 20 0.15 3 0 0 3 0
......................................................................................................................ATTGTTGATGGGATGTGAATGAGT............................................................................................................. 24 0 20 0.15 3 0 3 0 0
.........................................................................................GCAGTATTAGAGCGAAACTTA............................................................................................................................................. 21 0 7 0.14 1 0 1 0 0
...................................................................................TATTCTGCAGTGTTGGAGCG.................................................................................................................................................... 20 2 8 0.13 1 0 1 0 0
..................TAAAAACTGACCAAAAATGAG.................................................................................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0
.....................................................................................TTCTGCAGTATTAGAGCGAAGCTTGAC........................................................................................................................................... 27 2 10 0.10 1 0 1 0 0
...............................................................................................................................GGGATGTGAATGAGTATTCCGCAGTCG................................................................................................. 27 0 20 0.10 2 0 2 0 0
.......................................................................................CTGCAGTATTGGGGCGAAACT............................................................................................................................................... 21 2 11 0.09 1 0 1 0 0
........................................................................................TGCAGTATTAGAGCGAAGCCTAACTAC........................................................................................................................................ 27 2 13 0.08 1 1 0 0 0
..................................................................................GTATTCTGCAGTGTTAGAGCG.................................................................................................................................................... 21 2 14 0.07 1 0 0 1 0
........................................................................................TGCAGTATTGGAGCGAGGCTTA............................................................................................................................................. 22 3 19 0.05 1 0 0 1 0
............................................................................................GTATTAGAGCGAAACTTAA............................................................................................................................................ 19 0 20 0.05 1 0 0 1 0
.....................................................TTGGGGCGTGGCAAATCGGAAA................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0
...............................................................................................................................................TTCCGCAGTCGGTAACGCCCG....................................................................................... 21 0 20 0.05 1 0 0 0 1
.....................................................TTGGGGCGTGGCAAATCGG................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 1
............................................................................................................................................GTATTCCGCAGTCGGTAACGCCC........................................................................................ 23 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

CCATGACAATAGAGAAAGATTTTTGACTGGTTTTTACTCCACAGATGCGGATCAACCCCGCACCGTTTAGCCTTTTTGGACATATAAGACGTCATAATCTCGCTTTGAATTGATGATTTAACAACTACCCTACACTTACTCATAAGGCGTCAGCCATTGCGGGCTGACGTTGCAAGAATGAACAAAAAAAATAGAAACGTCGTTTAAGCTTCTTCGGTACCTCCAAACAAGTGTACCTTCGTGTTATGGTT
*********************************************************************************************************.(((((.((((((..........)).))))))))).......................**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
..............................................................................................................TGATGATTTAACAACTACCCTA....................................................................................................................... 22 0 20 3.25 65 65 0 0 0
..............................................................................................................................................................GCGGGCTGACGTTGCAAGAAT........................................................................ 21 0 20 0.80 16 16 0 0 0
.........................................................................................................TGAATTGATGATTTAACAACTACCCTA....................................................................................................................... 27 0 20 0.50 10 10 0 0 0
.............................................................................GGACATATAAGACGTCATAATCTCGC.................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0
..............................................................CCGTTTAGCCTTTTTGGACAT........................................................................................................................................................................ 21 0 20 0.25 5 5 0 0 0
...........................................................................TTGGACATATAAGACGTCATAATCTCG..................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0
...............................................................................ACATATAAGACGTCATAATCTCGC.................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0
................................................................................CATATAAGACGTCATAATCTCGC.................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................AGCCATTGCGGGCTGACGTTG............................................................................... 21 0 20 0.15 3 3 0 0 0
...........................................................................................................AATTGATGATTTAACAACTACCC......................................................................................................................... 23 0 20 0.10 2 2 0 0 0
..........................................................................................................GAATTGATGATTTAGCAACTACCCTA....................................................................................................................... 26 1 20 0.10 2 2 0 0 0
..............................................................CCGTTTAGCCTTTTTGGACATATAAGA.................................................................................................................................................................. 27 0 20 0.10 2 0 2 0 0
..........................................................................................................GAATTGATGATTTAACAACTA............................................................................................................................ 21 0 20 0.10 2 2 0 0 0
................................................................................................................ATGATTTAACAACTACCCTACACTT.................................................................................................................. 25 0 20 0.10 2 0 2 0 0
CCATGACAATAGAGAAAGATTT..................................................................................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0
.........................................................CCGCACCGTTTAGCCTTTTTG............................................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0
..........................................................................................................GAATTGATGATTTAACAACTACCCTAC...................................................................................................................... 27 0 20 0.10 2 0 0 2 0
................................................................................................................................................................GGGCTGACGTTGCAAGAATGAACAA.................................................................. 25 0 20 0.10 2 0 2 0 0
...........GAGAAAGATTTTTGACTGGTTTTTAC...................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
...........GAGAAAGATTTTTGACTGGT............................................................................................................................................................................................................................ 20 0 20 0.10 2 0 0 2 0
.............................................................................................................TTGATGATTTAACAACTACCC......................................................................................................................... 21 0 20 0.10 2 2 0 0 0
.......................................................CCCCGCACCGTTTAGCCTTTT............................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
...............................................................................................................GATGATTTAACAACTACCCTACACTT.................................................................................................................. 26 0 20 0.05 1 0 1 0 0
............AGAAAGATTTTTGACTGGTTTTTA....................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..........................................................................................................GAATTGATGATTTAACAACTACC.......................................................................................................................... 23 0 20 0.05 1 0 1 0 0
.........................................................................................................GGAATTGATGATTTAACAACTACCCT........................................................................................................................ 26 1 20 0.05 1 1 0 0 0
...TGACAATAGAGAAAGATTTTTGACT............................................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0
...........................................................................................................AATTGATGATTTAACAACTACCCTA....................................................................................................................... 25 0 20 0.05 1 0 0 1 0
CCATGACAATAGAGAAAGATT...................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
CCATGACAATAGAGAAAGATTTTTG.................................................................................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0
CCATGACAATAGAGAAAGATTTT.................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
....................................................................................................................TTTAACAACTACCCTACACTTA................................................................................................................. 22 0 20 0.05 1 0 1 0 0
..............................................................CCGTTTAGCCTTTTTGGA........................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
..............................................................................................................................................TAAGGCGTCAGCCATTGCGG......................................................................................... 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................CAGCCATTGCGGGCTGACGTTGCAA............................................................................ 25 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................GCGGGCTGACGTTGCAAGAA......................................................................... 20 0 20 0.05 1 1 0 0 0
...........................TGGTTTTTACTCCACAGATGCGG......................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:12597594-12597844 - dmo_1532 GGTA-------------CTGTTATCTCTTTCTAAA-AACTGACC----------------------------------------------------AAAAATGAGGTGTCTACGCCTAGTTGGGGCG------TGGCAAATCGGAAA-AACCTGTATATTCTGCAGTATTAGA-----GCGAA-ACTTAACTACTAAATTGTTGATGGGATGTG--------------------------------------------------------------------------------------AAT-------GAGTAT-----------TCCGCAGTCGGTAACGCCCGACTGCAACGTT-CTTACTTGTTTTTTTTA-------T----------------CTTTGCAGCAAATTCGAAGAAGCCATGG------AGGTT---TGTTCACATGGAAGCACAAT----ACCAA
droVir3 scaffold_13049:5888481-5888651 + ACTA-------------CTG--ATTA------ATA-AACTGATC----------------------------------------------------AAAAAAGA-----TTGCCCTTACTTGTGCCG------TGTCAAATAGGAATCGGGTTTTCAATCAGTTTGACGGGCT-----TCAAG-CTGTTA--------------TTGGATTGTG--------------------------------------------------------------------------------------AAG-------GAGTAT-----------TTCGCAGTCGTTAACACCCGACTGCAATGTA-CTTGATTATTTTTTGCC-------T------------------T-----------------------------------------------------------------TTT
droGri2 scaffold_15110:19076404-19076665 - GGATTTTACTTGCTGAT--G-ATTATATCTACC-TAATTTTAAAGGCAAACTTGGACGGAGGATAGTTAAAATCTCCTTCAAAGAACGGTACATCCAACATGTTCTTTGCTACCTCTTC------TC------------------------------------------------------AG-CTGGTA--------TTATTTAT----GATA--------------------------------TC-------------------------------------------------------A------AAGTAT-----------TTCGCAGTCGGTTACGCCCGACAGCAACGTT-CTCTCTTGTTTTTTAAA-------TTAAAACTACAA------------GAAAATCTAAAGCAGGCAAGTTTCTTAAAGTAATGTTTGAACTTAATAAAAGC--------GAA
droWil2 scf2_1100000004585:3266529-3266716 - AACA-------------CCA--GAAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------CTCAACGA-TACTGTATCGATAAGCGATGTATGTACATAAAGTACTCGATACCTTACGATAGCAGTAACGCAACGGTTTTAGCCAAATTTCAAATATTTT------------------TTTATTT-----------------------------------------------------------------------------------CTTTAT-CATTGTAGTAAATTTGAAGAGGCCATGG------ATCTGATATCCACACATGGCGGCAGTTT----ACCAG
dp5 XR_group6:3836082-3836134 - CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT-CCCCCTCGTTATTATTA-------T----------------CCCCAGAGTAATCTCAAAGAATTCACGG-------------------------------------------
droPer2 scaffold_62:301393-301523 + TCTG-------------CCG--AAGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------G------CCATA----------------------------------------------------------------------------------------------------CTGACTTAGTATC-------GGGTATAACTGTAGAGTTGCGGTGTCCGCAGCAAC---TCACAACGTT-CCCCCTCGTTTTTTTTA-------C----------------TTTTTTAAGAAAACCAAAAACACCTTG--------------------------------CAA----TCTTG
droAna3 scaffold_13258:816954-817097 - TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------GGTAT-----------ATCAACTTCGGCTCCGCCCGAAGTTAGCTTTCCATTCTTGTTTTTTATTACATATATTTTTACATTGAAATGA-TTTGAAGCAAATATGAAGATGCAATTG------AGGTGGTCACAAAACATGGAGGAAGCAT----GCCGA
droBip1 scf7180000395375:464-600 - TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------GGTAT-----------ATCAACTTCGGTTCCGCCCGAAGTTAGTTTTTCTTTCTTGTTTATTATA-------TTTTTACCATTAAATGT-TTTTAAGCAAATACAAAGATGCAATTG------AGGTGGTCACAAAACACGGAGGAAGCAT----GCCGA
droKik1 scf7180000301949:10444-10527 - ACAATC-C-------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT------------------------------------------------------------ACTTTT-------T----------------ATTAACAGTAAATTCGAAGAAGCAATTG------ACTTAATATCTACGCATGGAGGAAGCTT----TCCCA
droFic1 scf7180000454040:600953-601020 + TTCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTTATTA-------T----------------TTTTGCAGCAAATTCAAA--TCCAGTTG------ATTTTTGGA---CACATCT-----TTTT----ACTAT
droEle1 scf7180000491143:4746-4846 - TTTG-------------ATT--GTAACTTACT---------------------------------------------------------------------------------------------------------------------------------------------TTGAA-----------------------------------------------------------------------------------------------------------GTTAGTTGACTGAGTAAC-------GGGTAT-----------CTAATAGTCGG-AAGACTTGACTTTAGCGTT-CTCTCTTGTTTTTCTTA-------G----------------CTTTGT----------------------------------------------------------------A
droRho1 scf7180000777105:2810-2941 - GTAG-------------ATG--GCG------------------------------------------------------------------------------------------------------------------------------------------CAATACAATA-----GCGCATATTTA--TATTAA----------------------------------------------------------------------------------------GTTGTTTAGCTGAGTAAC-------GGGTAT-----------CTAATAGTCGA-GGCGCTCGACTATAGCGTT-CTCTCTTGTTTTTTTTT-------A--------------------------ATTTCTTTGTAC----------------------------------ACGCAG----ACTCG
droBia1 scf7180000300327:1359-1444 + AGCTCTCC-------------TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT-----------------------------------------------------------CCTTTAA-------T----------------TTAAACAGTAAATTCGAGGAGGCAATAG------AACTGCTTGCCACTCATGGCGGTAGCGT----TCCCG
droTak1 scf7180000415055:9957-10084 + CTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------------------------GTTGTTTAACTGAGTAAC-------GGGTAT-----------CTAATAGTCGA-GCCACTCGACTATAGCGTT-CTCTCTTGTTTTTTTTA-------T--------------------AAACTTTTTTCTAATATATGATGG------ACGTT---GATGCAC---------ACGAGCAGTACAA
droEug1 scf7180000409554:2339216-2339324 + AGCAAAAC-------------TAA----TATT---------------------------------------------------------------------------------------------------------------------------------------------TTAAA-----------------------------------------------------------------------------------------------------------ATTGTGTAAAACAGTAAC-------GGGTAT-----------CTTATAGTCGC-GGCACTCGACTATAGCGTT-TCCTCTTGTTTTTTTTG-------C----------------TGTTGTCC--------------------------------------------------CCAA----GTTGA
dm3 chr2L:22831481-22831558 + TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAACGT----TCCCG
droSim2 2l:22949150-22949227 + TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAATGT----TCCCG
droSec2 scaffold_72:107216-107293 + TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAATGT----TCCCG
droYak3 4:290714-290895 - TAGT-------------CTT--ATAAATTTCTATC-GATTTGCC----------------------------------------------------AAAAAACTTTTTGCCACGCCCAC------TCTAACGACCACAAACCGGCAA-AAACTGTCAGTGTTGAAGACCTCCT-----TCGCA-CTTTCA----------------------------------------------------------------------------------------------------CTAGCTGAGTAAC-------GGGTAT-----------CAGATAGTTGG-GGAACTCGACTATAGCGTT-CTCTCTTGTTTTTCTTT-------T----------------TCT-----------------------------------------------------------------TTG
droEre2 scaffold_4845:546276-546362 - AACTTACT------CAA----CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT-----------------------------------------------------------------------------------GTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATAGCTGCGAATGGAGGTAACAT----GCCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGTA-------------CTGTTATCTCTTTCTAAA-AACTGACC----------------------------------------------------AAAAATGAGGTGTCTACGCCTAGTTGGGGCG------TGGCAAATCGGAAA-AACCTGTATATTCTGCAGTATTAGA-----GCGAA-ACTTAACTACTAAATTGTTGATGGGATGTG--------------------------------------------------------------------------------------AAT-------GAGTAT-----------TCCGCAGTCGGTAACGCCCGACTGCAACGTT-CTTACTTGTTTTTTTTA-------T----------------CTTTGCAGCAAATTCGAAGAAGCCATGG------AGGTT---TGTTCACATGGAAGCACAAT----ACCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................TGCAGTATTAGA-----GCGAA-ACTTAACTAC.....................................................................................................................................................................................................................................................................................2744.75190000190
......................................................................................................................................................................TATTAGA-----GCGAA-ACTTAACTACT....................................................................................................................................................................................................................................................................................23202.60525200000
........................................................................................................................................................................................................GTTGATGGGATGTG--------------------------------------------------------------------------------------AAT-------GAGTAT-----------TC..............................................................................................................................................25201.05210000021
.................................................................................................................................................................TGCAGTATTAGA-----GCGAA-ACTTAAC........................................................................................................................................................................................................................................................................................2460.332100010
.................................................................................................................................................................TGCAGTATTAGA-----GCGAA-ACTTAACT.......................................................................................................................................................................................................................................................................................2560.332100010
.................................................................................................................................................................TGCAGTATTAGA-----GCGAA-ACTTAACTA......................................................................................................................................................................................................................................................................................2640.251000001
................................................................................................................................................AAA-AACCTGTATATTCTGCAG.................................................................................................................................................................................................................................................................................................................2140.251100000
................................................................................................................................................................CTGCAGTATTAGA-----GCGAA-ACTTAA.........................................................................................................................................................................................................................................................................................2450.201100000
............................................................................................................................................................TATTCTGCAGTATTAGA-----GCGA.................................................................................................................................................................................................................................................................................................2150.201000001
...........................................................................................................................................................................................................GATGGGATGTG--------------------------------------------------------------------------------------AAT-------GAGTAT-----------TCC.............................................................................................................................................23200.153300000
...............................TAAA-AACTGACC----------------------------------------------------AAAAATGAGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................26200.153000003
.....................................................................................................................................................................................................ATTGTTGATGGGATGTG--------------------------------------------------------------------------------------AAT-------GAGT.............................................................................................................................................................24200.153300000
..................................................................................................................................................................GCAGTATTAGA-----GCGAA-ACTTA..........................................................................................................................................................................................................................................................................................2170.141100000
...............................TAAA-AACTGACC----------------------------------------------------AAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................21200.102200000
..............................................................................................................................................................................................................GGGATGTG--------------------------------------------------------------------------------------AAT-------GAGTAT-----------TCCGCAGTCG......................................................................................................................................27200.102200000
.....................................................................................................................................................................GTATTAGA-----GCGAA-ACTTAA.........................................................................................................................................................................................................................................................................................19200.051000001
.......................................................................................................................TTGGGGCG------TGGCAAATCGGAAA-...................................................................................................................................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................................T-----------TCCGCAGTCGGTAACGCCCG............................................................................................................................21200.051001000
.......................................................................................................................TTGGGGCG------TGGCAAATCGG.......................................................................................................................................................................................................................................................................................................................................19200.051001000
........................................................................................................................................................................................................................................................................................................................GTAT-----------TCCGCAGTCGGTAACGCCC.............................................................................................................................23200.051100000
droVir3
ACTA-------------CTG--ATTA------ATA-AACTGATC----------------------------------------------------AAAAAAGA-----TTGCCCTTACTTGTGCCG------TGTCAAATAGGAATCGGGTTTTCAATCAGTTTGACGGGCT-----TCAAG-CTGTTA--------------TTGGATTGTG--------------------------------------------------------------------------------------AAG-------GAGTAT-----------TTCGCAGTCGTTAACACCCGACTGCAATGTA-CTTGATTATTTTTTGCC-------T------------------T-----------------------------------------------------------------TTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
GGATTTTACTTGCTGAT--G-ATTATATCTACC-TAATTTTAAAGGCAAACTTGGACGGAGGATAGTTAAAATCTCCTTCAAAGAACGGTACATCCAACATGTTCTTTGCTACCTCTTC------TC------------------------------------------------------AG-CTGGTA--------TTATTTAT----GATA--------------------------------TC-------------------------------------------------------A------AAGTAT-----------TTCGCAGTCGGTTACGCCCGACAGCAACGTT-CTCTCTTGTTTTTTAAA-------TTAAAACTACAA------------GAAAATCTAAAGCAGGCAAGTTTCTTAAAGTAATGTTTGAACTTAATAAAAGC--------GAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AACA-------------CCA--GAAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------CTCAACGA-TACTGTATCGATAAGCGATGTATGTACATAAAGTACTCGATACCTTACGATAGCAGTAACGCAACGGTTTTAGCCAAATTTCAAATATTTT------------------TTTATTT-----------------------------------------------------------------------------------CTTTAT-CATTGTAGTAAATTTGAAGAGGCCATGG------ATCTGATATCCACACATGGCGGCAGTTT----ACCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGAAGAGGCCATGG------ATCTGATAT............................2811.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAGGCCATGG------ATCTGAT..............................2311.00100100
.............................................................................................................................................................................................................TAAGCGATGTATGTACATAAAGTA..................................................................................................................................................................................................................................................2411.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAGGCCATGG------ATCTGAT..............................2211.00100100
dp5
CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT-CCCCCTCGTTATTATTA-------T----------------CCCCAGAGTAATCTCAAAGAATTCACGG-------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCTG-------------CCG--AAGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------G------CCATA----------------------------------------------------------------------------------------------------CTGACTTAGTATC-------GGGTATAACTGTAGAGTTGCGGTGTCCGCAGCAAC---TCACAACGTT-CCCCCTCGTTTTTTTTA-------C----------------TTTTTTAAGAAAACCAAAAACACCTTG--------------------------------CAA----TCTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................TCCGCAGCAAC---TCACAACGTT-CCCC............................................................................................................25201.20240240000
.......................................................................................................................................................................................................................................................................................................TTAGTATC-------GGGTATAACTGTA....................................................................................................................................................21200.357000007
...............................................................................................................................................................................................................................................................................................................................TGTAGAGTTGCGGTGTCCGC....................................................................................................................................20200.306060000
.....................................................................................................................................................................................................................................................................................................................................................CAAC---TCACAACGTT-CCCCCTCGTT......................................................................................................24200.051010000
............................................................................................................................................................................................................................................................................................................................AACTGTAGAGTTGCGGTGTCC......................................................................................................................................21200.051000001
droAna3
TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------GGTAT-----------ATCAACTTCGGCTCCGCCCGAAGTTAGCTTTCCATTCTTGTTTTTTATTACATATATTTTTACATTGAAATGA-TTTGAAGCAAATATGAAGATGCAATTG------AGGTGGTCACAAAACATGGAGGAAGCAT----GCCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAACATGGAGGAAGC...........1911.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAACATGGAGGAAGCAT----.....2111.001100000
..........................................................................................................................................................................................................................................................................................................................AT-----------ATCAACTTCGGCTCCGCCCGAAGT........................................................................................................................26200.051000001
droBip1
TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------GGTAT-----------ATCAACTTCGGTTCCGCCCGAAGTTAGTTTTTCTTTCTTGTTTATTATA-------TTTTTACCATTAAATGT-TTTTAAGCAAATACAAAGATGCAATTG------AGGTGGTCACAAAACACGGAGGAAGCAT----GCCGASizeHit CountTotal NormTotal
No Reads
droKik1
ACAATC-C-------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT------------------------------------------------------------ACTTTT-------T----------------ATTAACAGTAAATTCGAAGAAGCAATTG------ACTTAATATCTACGCATGGAGGAAGCTT----TCCCASizeHit CountTotal NormTotal
No Reads
droFic1
TTCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTTATTA-------T----------------TTTTGCAGCAAATTCAAA--TCCAGTTG------ATTTTTGGA---CACATCT-----TTTT----ACTATSizeHit CountTotal NormTotal
No Reads
droEle1
TTTG-------------ATT--GTAACTTACT---------------------------------------------------------------------------------------------------------------------------------------------TTGAA-----------------------------------------------------------------------------------------------------------GTTAGTTGACTGAGTAAC-------GGGTAT-----------CTAATAGTCGG-AAGACTTGACTTTAGCGTT-CTCTCTTGTTTTTCTTA-------G----------------CTTTGT----------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
GTAG-------------ATG--GCG------------------------------------------------------------------------------------------------------------------------------------------CAATACAATA-----GCGCATATTTA--TATTAA----------------------------------------------------------------------------------------GTTGTTTAGCTGAGTAAC-------GGGTAT-----------CTAATAGTCGA-GGCGCTCGACTATAGCGTT-CTCTCTTGTTTTTTTTT-------A--------------------------ATTTCTTTGTAC----------------------------------ACGCAG----ACTCGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCTCTCC-------------TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT-----------------------------------------------------------CCTTTAA-------T----------------TTAAACAGTAAATTCGAGGAGGCAATAG------AACTGCTTGCCACTCATGGCGGTAGCGT----TCCCGSizeHit CountTotal NormTotal
No Reads
droTak1
CTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------------------------GTTGTTTAACTGAGTAAC-------GGGTAT-----------CTAATAGTCGA-GCCACTCGACTATAGCGTT-CTCTCTTGTTTTTTTTA-------T--------------------AAACTTTTTTCTAATATATGATGG------ACGTT---GATGCAC---------ACGAGCAGTACAASizeHit CountTotal NormTotal
No Reads
droEug1
AGCAAAAC-------------TAA----TATT---------------------------------------------------------------------------------------------------------------------------------------------TTAAA-----------------------------------------------------------------------------------------------------------ATTGTGTAAAACAGTAAC-------GGGTAT-----------CTTATAGTCGC-GGCACTCGACTATAGCGTT-TCCTCTTGTTTTTTTTG-------C----------------TGTTGTCC--------------------------------------------------CCAA----GTTGASizeHit CountTotal NormTotal
No Reads
dm3
TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAACGT----TCCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTATATC...........................26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000020000000010010000000000011200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGG------AACTTATATCT..........................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGCGAATGGAGGTAACGT----TCCCG2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGG------AACTTATATCTGCGAATGGAG................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGAATGGAGGTAACGT----TCC..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATCTGCGAATGGAGGT..............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGAGGAGGCAATGG------AACTTAT..............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GG------AACTTATATCTGCGAATGGAG................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCAATGG------AACTTATATCTG.........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTT................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACT.................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAATGG------AACTTATATCTG.........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTGAGGAGGCAATGG------AACTTATA.............................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTGAGGAGGCAATGG------AACTT................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTATATCTGC........................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGAGGAGGCAATGG------.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACTTATATCTGC........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTGAGGAGGCAAT.............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGAATGGAGGTAACGT----TCCCG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACTTATATC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATGGAGGTAACGT----TC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACTTA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATGGAGGTAACGT----TCCCG2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTGCGAATGGAGGTAAC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCTGCGAATGGAGGTAACGT----T....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGAGGAGGCAATGG------A....................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTGCGAATGGAGGTAACGT----T....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TATTAT-TTTAAAGTAAATTTGAGGAGG.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AATGG------AACTTATATCTGCG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAATGG------AACTTATATCTGC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGGT..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGAGGAGGCAATGG------AAC..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGAGGAGGCAATGG------AACTT................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTGAGGAGGCAATGG------AACTTA...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGG------AACTTATATCTGC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGAATGGAGGTAACGT----.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGG------AACTTATATCTGCGAATGGAGGT..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGAGGAGGCAATGG------AACTTATATC...........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATTTGAGGAGGCAATGG------AACT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATATCTGCGAATGGAG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCTGCGAATGGAGGT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGAGGAGGCAATGG------AACT.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGGTA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTATATCTGCGAATGGAGGTAAC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGTAACGT----TCCCG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGCGAATGGAGGTAACGT----T....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCTGCGAATGGAGGTAACG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGAATGGAGGTAACGT----TCCCG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGGAGGCAATGG------AACTTATA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGG...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTATAA............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAATGT----TCCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGGT..............2611.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGG...............2511.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTGAGGAGGCAAT.............................................1811.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTAT..............................2311.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGAGGTAATGT----TCCC.1911.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACT.................................2011.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATGGAGGTAATGT----TC...1911.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTATAA............................2511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACTTATATCTGC........................2711.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------AACTTATATCTGCGAATGGAGGTAA............2811.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGCGAATGGAGGTAATGT----TCCCG2711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGG------AACTTATATCTGCG.......................1830.33100000001000000000
droSec2
TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTT-----------------------------------------------------------------------------------CTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATATCTGCGAATGGAGGTAATGT----TCCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAGGCAATGG------AACTTAT..............................2311.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AATGG------AACTTATATCTGCGAATGGAGGT..............2811.0010100
droYak3
TAGT-------------CTT--ATAAATTTCTATC-GATTTGCC----------------------------------------------------AAAAAACTTTTTGCCACGCCCAC------TCTAACGACCACAAACCGGCAA-AAACTGTCAGTGTTGAAGACCTCCT-----TCGCA-CTTTCA----------------------------------------------------------------------------------------------------CTAGCTGAGTAAC-------GGGTAT-----------CAGATAGTTGG-GGAACTCGACTATAGCGTT-CTCTCTTGTTTTTCTTT-------T----------------TCT-----------------------------------------------------------------TTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................TTTTTGCCACGCCCAC------TCTAACGAC.................................................................................................................................................................................................................................................................................................................................................25110.45501400000000
...................................................................................................AAACTTTTTGCCACGCCCAC------TCTAACGAC.................................................................................................................................................................................................................................................................................................................................................2990.11100100000000
....................................................................................................AACTTTTTGCCACGCCCAC------TCTAACGAC.................................................................................................................................................................................................................................................................................................................................................2890.11100100000000
...........................................................................................................TGCCACGCCCAC------TCTAACGAC.................................................................................................................................................................................................................................................................................................................................................21200.10220000000000
.........................................................................................................TTTGCCACGCCCAC------TCTAACGACCACA.............................................................................................................................................................................................................................................................................................................................................27130.08101000000000
..........................................................................................................................................................................................................................................................................................................................................................GACTATAGCGTT-CTCTCTTGTTTTTC..................................................................................................26200.05100100000000
..........................................................................................................TTGCCACGCCCAC------TCTAACGAC.................................................................................................................................................................................................................................................................................................................................................22200.05110000000000
.................................................................................................................................................................TGAAGACCTCCT-----TCGCA-CTTTCA----------------------------------------------------------------------------------------------------CTAGC................................................................................................................................................................................28200.05100100000000
..........................................................................................................................................................................................................................................................................................................................AT-----------CAGATAGTTGG-GGAACTCGACT.........................................................................................................................24200.05100000010000
.......................TAAATTTCTATC-GATTTGCC----------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
AACTTACT------CAA----CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT-----------------------------------------------------------------------------------GTATTAT-TTTAAAGTAAATTTGAGGAGGCAATGG------AACTTATAGCTGCGAATGGAGGTAACAT----GCCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATGGAGGTAACAT----GCCT.2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................G------AACTTATAGCTGCGAATGGAG................2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGCAATGG------AACTTATAGC...........................2411.0011000000

Generated: 05/18/2015 at 12:43 AM