ID:

dmo_1477

 Coordinate:

scaffold_6500:6500709-6500859 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.1 -10.1 -9.9 -9.9

Flybase annnotation

CDS [Dmoj\GI14013-cds]; exon [dmoj_GLEANR_1403:1]; intron [Dmoj\GI14013-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAGACAGCAGTTTTCTGAGTCTACAGCTGATCAATTCGGAGCTCTTCATGGTCAGATCATTGGGCTTCTATGAGTACTACATATGCGAATATGAGACACGGCAACAGAAATTATGCAAGATCCTTAAAAACCCCGATTTTTATATTCCTTCGGTGGCAATTATTCTTGCAATTATATTAGCCGTAAAATTAATATTAAAGAATTCAAAAAGGAAAGCAAAAGAGGATGAACAGGCACTAGTTGGGTCTAAT
**************************************************((.......((((((((.(((((((.((.(((((....))))))))).............))))).)))............))))).....))************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 M060
embryo
...................................................................................................................................................................................................................................GAACAGGCACTAGTTGGGT..... 19 0 2 4.50 9 5 4 0 0
...................................................................................................................................................................................................................GAAAGCAAAAGAGGATGAACAGGCA............... 25 0 1 3.00 3 3 0 0 0
........................................................................................................................................................................................................AATTCAAAAAGGAAAGCAAAAGA............................ 23 0 1 2.00 2 1 1 0 0
................................AATTCGGAGCTCTTCATGGTC...................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0
..................GTCTACAGCTGATCAATTCGGAGCT................................................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0
..GACAGCAGTTTTCTGAGT....................................................................................................................................................................................................................................... 18 0 2 1.50 3 3 0 0 0
...............................................................................................................................................................................................................................GGATGAACAGGCACTAGTTGGGT..... 23 0 2 1.50 3 3 0 0 0
.......................................................................................................................................................................................................GAATTCAAAAAGGAAAGCAAAA.............................. 22 0 1 1.00 1 1 0 0 0
........................................GCTCTTCATGGTCAGATCAT............................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
......................................................................................................................GATCCTTAAAAACCCCGATTTTTAT............................................................................................................ 25 0 1 1.00 1 1 0 0 0
.............................................................................................................ATTATGCAAGATCCTTAAAAACCCC..................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................ATTAAAGAATTCAAAAAGGAAAG................................... 23 0 1 1.00 1 0 1 0 0
..........................................TCTTCATGGTCAGATCATTGGGCTT........................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
..................................................GTCAGATCATTGGGCTTCTATGA.................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0
....................CTACAGCTGATCAATTCGGAGCTCTT............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0
.................................................GGTCAGATCATTGGGCTTCTATGA.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
....................................................................................................................................................................CTTGCAATTATATTAGCCGTAA................................................................. 22 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................ATTAGCCGTAAAATTAATATT....................................................... 21 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................GAATTCAAAAAGGAAAGC.................................. 18 0 1 1.00 1 0 0 1 0
....................CTACAGCTGATCAATTCGGAGCTCTTC............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................GAAAGCAAAAGAGGATGAACAGGC................ 24 0 1 1.00 1 1 0 0 0
.....................TACAGCTGATCAATTCGGAG.................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
..............................................CATGGTCAGATAATTGGGC.......................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................ATTAAAGAATTCAAAAAGGA...................................... 20 0 1 1.00 1 1 0 0 0
....................CTACAGCTGATCAATTCGGAGC................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0
....................CTACAGCTGATCAATTCGGA................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...................TCTACAGCTGATCAATTCGGAGC................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................ATTCAAAAAGGAAAGCAAAAGAGGAT........................ 26 0 1 1.00 1 0 1 0 0
.........GTTTTCTGAGTCTACAGCT............................................................................................................................................................................................................................... 19 0 2 1.00 2 1 1 0 0
..............................................................................................................TTATGCAAGATCCTTAAAAACCCCG.................................................................................................................... 25 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................AGAATTCAAAAAGGAAAGCAAAAGA............................ 25 0 1 1.00 1 1 0 0 0
..............................TCAATTCGGAGGTCTTCAT.......................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0
...........................................................................................................................................................................TTATATTAGCCGTAAAATTA............................................................ 20 0 1 1.00 1 1 0 0 0
.........................................................................GTACTACATATGCGAATATGAGACACGG...................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0
...................................................................................................................................................................................................................GAAAGCAAAAGAGGATGAACAGGCACT............. 27 0 1 1.00 1 0 0 1 0
.................................................................................................................................................................ATTCTTGCAATTATATTAGCC..................................................................... 21 0 2 0.50 1 1 0 0 0
.....................................................................................................CAACAGAAATTATGCAAGATCCTT.............................................................................................................................. 24 0 2 0.50 1 1 0 0 0
..............................................................................................GACACGGCAACAGAAATTATGCAAG.................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................................AAGAGGATGAACAGGCACTAGTTGG....... 25 0 2 0.50 1 0 1 0 0
.........................................................CATTGGGCTTCAATGAGTA............................................................................................................................................................................... 19 1 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................TAAAAGAGGATGAACAGGCACTAGTT......... 26 1 2 0.50 1 1 0 0 0
........................................................................................ATATGAGACACGGCAACAGA............................................................................................................................................... 20 0 2 0.50 1 0 1 0 0
...............................................................................................................................................................................................................................GGATGAACAGGCACTAGTTGG....... 21 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................................AAGAGGATGAACAGGCACTA............ 20 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................CAAAAGAGGATGAACAGGC................ 19 0 2 0.50 1 1 0 0 0
.........GTTTTCTGAGTCTACAGCTGATC........................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
................................................................................ATATGCGAATATGAGACACGGCA.................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
.........................................................................................................AGAAATTATGCAAGATCCTT.............................................................................................................................. 20 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................................................................................AAAAGAGGATGAACAGGCACT............. 21 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................................................................................ATGAACAGGCACTAGTTGGGT..... 21 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................................................................................AAAAGAGGATGAACAGGC................ 18 0 2 0.50 1 1 0 0 0
.............................................................................TACATATGCGAATATGAGACACGGCAACA................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................ATTATTCTTGCAATTATATT......................................................................... 20 0 2 0.50 1 1 0 0 0
......................................................................................................................................................CGGTGGCAATTATTCTTGCA................................................................................. 20 0 2 0.50 1 1 0 0 0
.........GTTTTCTGAGTCTACAGCTGAT............................................................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................................................................GCAAAAGAGGATGAACAGG................. 19 0 2 0.50 1 0 1 0 0
......................................................................................................................................................................................................................AGCAAAAGAGGATGAACAGG................. 20 0 2 0.50 1 0 1 0 0
......................................................................................................................................................CGGTGGCAATTATTCTTGCAATT.............................................................................. 23 0 2 0.50 1 1 0 0 0
...ACAGCAGTTTTCTGAGTCTACAGCT............................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.......................................................ATCATTGGGCTTCTATGA.................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0
............................................................................................GAGACACGGCAACAGAAATTATGCAAG.................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................CAAAAGAGGATGAACAGGCACTAGTTG........ 27 0 2 0.50 1 0 1 0 0
.......................................................................................................................................................................................................................GCAAAAGAGGATGAACAGGCA............... 21 0 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................................................GAACAGGCACTAGTTGGGTCT... 21 0 2 0.50 1 1 0 0 0
...........TTTCTGAGTCTACAGCTGATC........................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0
...................................................................................................GGCAACAGAAATTATGCAAGATCCTT.............................................................................................................................. 26 0 2 0.50 1 1 0 0 0
.......................................................................................AATATGAGACACGGCAACAGAAATTATG........................................................................................................................................ 28 0 2 0.50 1 1 0 0 0
........AGTTTTCTGAGTCTACAGC................................................................................................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................................................................GCAAAAGAGGATGAACAGGC................ 20 0 2 0.50 1 0 1 0 0
....CAGCAGTTTTCTGAGTCTACAGC................................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
.................................................................................................................................................TCCTTCGGTGGCAATTATTCTTGCA................................................................................. 25 0 2 0.50 1 1 0 0 0
...................................................................................TGCGAATATGAGACACGGC..................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0
......................................................................................................................................GATTTTTATATTCCTTCGGTG................................................................................................ 21 0 2 0.50 1 1 0 0 0
.......................................................................................AATATGAGACACGGCAACA................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0
........................................................................................................CAGAAATTATGCAAGATCCTT.............................................................................................................................. 21 0 2 0.50 1 1 0 0 0
...........................................................................ACTACATATGCGAATATGAGACACGGCAA................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................CAAAAAGCAAAGCAAAAGAGGA......................... 22 1 3 0.33 1 0 1 0 0
................................................................................................................................................................................................................................GGTGAACAGCCTCTAGTTG........ 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TTCTGTCGTCAAAAGACTCAGATGTCGACTAGTTAAGCCTCGAGAAGTACCAGTCTAGTAACCCGAAGATACTCATGATGTATACGCTTATACTCTGTGCCGTTGTCTTTAATACGTTCTAGGAATTTTTGGGGCTAAAAATATAAGGAAGCCACCGTTAATAAGAACGTTAATATAATCGGCATTTTAATTATAATTTCTTAAGTTTTTCCTTTCGTTTTCTCCTACTTGTCCGTGATCAACCCAGATTA
************************************************************************************************************((.......((((((((.(((((((.((.(((((....))))))))).............))))).)))............))))).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V041
embryo
 M046
female body
..................................................................................................................................................................................................................CCTTTCGTTTTCTCCTACTTGTCCG................ 25 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................TCGTTTTATCCTAGTTGTCCCT............... 22 3 4 0.25 1 0 1 0
..........................................................................................................................................................................................................................TGTCTCCTACGTCTCCGTGA............. 20 3 8 0.13 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:6500659-6500909 - dmo_1477 AAGACA---GCAGTTT-T--CTGAGTCTACAGCTGATCAATTCGGAGCTCTTCATGGTCAGATCATTGGGCTTCTATGAGTACTACATATGCGAATATGAGACACGGCAACAGAAATTATGCAAGATCCTTAAAAACCCC----------------GATTTTTATATT----C----CTTCGGTGGCAATTATTC----------TTGCAATTATATTAG------------------------------------CCGTAAAATT--------------AATATTA-------AAG------AA------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAAGAGGATGAACAGGC--ACTAG----TTGGGTCTAAT
droVir3 scaffold_12723:3291537-3291633 + CGCTCA---ATTCGTT-T--TTGAGCCTGCAGCTTGTCAACTCGGAGCTGTTTATGGTCACATCGTGGGGCTTTGATCAGTTTTATATATGTGAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAC
droGri2 scaffold_15126:180953-181144 - AGGGTT---T-------T--GTGGGTCTGCAACTGATCGGCAAGGAGCTGTTCATGTTCAGATCGTGGGGTTATGATCAGTTTTATATATGTGAAGAAAACTCGATAT-----------TGCAAAAGCTTTGGTTACTCCTAGATAG-----------TGTTTATACT----C-----------------------------------------------------------------------------TTATATTCATTACATT--------------TGTTTTA-------GTTCTATTAAT--TTGTTAT--------------------------------AAAATACGA-----------------------------------------------CGAGAAA
droWil2 scf2_1100000004943:1343233-1343348 - TGAAAA---TCAG-GA-TGTCTACATTTGGAATGAA----------------------------------------------------------------------------------------------------------------------------------------ATTATTTT---------------GCCAGTTTTCGTGTCACA-TATTGA------------------------------------AAG------T----AATAGAAGCA-------------C------TT------------------------AAAGAGG-------------------------------TGA-CAACATAGATTGAACAA----ATT-----------CGATAT
dp5 Unknown_singleton_1941:1883-2002 + ATCTCG---AC------------------------------------------------------------------------------------------------------------------AT-------TTTT------------------------------TCCA------------------------------------------------ATGCAGTTTTGTGCGCAATTATATTTCTAATAATAATCATTACATT--------------AATATTT-------AAGCTAAGAAG------------------------A-------AGAA---------GAA-------AAAATAAA----------------AAA--GCGATATCCATG-AGCTGAA
droPer2 scaffold_76:93115-93224 + ACATTT---TT-------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA------------------------------------------------ATGCAGTTTTGTGTGCAATTATATTTATAATAATAGTCATTACATT--------------AATATTT-------AAGCTAAGAAG------------------------A-------A------------GAA-------AAAATAAA----------------AAA--GCGATATCCAT--GAGCTGC
droAna3 scaffold_12943:4099462-4099546 - ATTAGC---CA----------------------------------------------------------------------------------------------------------------CAATCCTTAAACCCCCC----------------GATTTTCAACCT----C----CTTTTTT-----TTTTTT----------TTGCTCTT-TCTTGG------------------------------------CCGT--------------------------------------------------------------------------------------CAAATGGGG-----------------------------------------------ATGGAAG
droBip1 scf7180000396366:160625-160717 - TAGAAA---AT-CATA-T--CTCAGTCTCCAGCTGATCAACTCCACGTTGTACATGCAGGAATCTCTTGGCCAAGCCGACTACTACATCTGTGAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGA
droKik1 scf7180000302683:180445-180563 + ATACAT---GA-----A---------ATGTGGCACGTCAACTAGG----------------------------------------------------------------------GTTGT-CGAAAT-------ATTT------------------------------ACAA------------------------------------------------ATATTGTATCGATGATATTTATTATTGAAAC--AAAATATTAAAAT--------------GATATTT-------GATATA-----------------------------T-------CAGAA--------AA--------------------------------------------------AAATATC
droFic1 scf7180000453796:213347-213447 + TTTTGA---TA----------TACTTTCTAAGCTA-----------------------------------------------------------------------------------------------------------------------------------------ATTATTCT---------------TTT-GTTTTCCTAT--------------------------------------------TGCTCTTTAACTC--------------AATACCTAAAGTTT------TA------------------------GAAAAGG-------------------------------AAA-CACT-----------------ACTCA----ATC-ATTTGGT
droEle1 scf7180000491046:3618447-3618543 - AGGAGGTGAGAAGCTA-T--CTCAGTCTGGAACTGGCCAATTCCTCGCTGTACATGCGACCAGCTTTCGGCCACGACGACTACTATATCTGCGAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA
droRho1 scf7180000770772:6319-6429 + AAACAT---TA-----A---------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTTA----T----CCATCG------TTTTTT----------TTGTATACCTAATAAATATT----------------------------------TAAAGCT-AATATTATAAGTT-------------T------AT------------------------AAAAAGTTAAACTATTTATAATAACACGA-----------------------------------------------ATTGAAT
droBia1 scf7180000301451:6067-6163 - GAGAAA---TG-----------------------------------------------------------------------------------------------ACAAAAAAACCTGTGCACGTTCCACAAAAATATT----------------AATTTTTACACT----T----AAATCG------C---------------------------------------------------------G----------TC---------------TAATTGTCGTTT-------AATAAA-----------------------------A-------------------TGAATA-----------------------------------------------TTAAAAA
droTak1 scf7180000414060:1255-1469 + GACGGA---AC--CTA-T--CTCAGCCTGCAATTGGTGAACTCCACGCTGTACATGCGACCATCTTATGGGGAAGATGACTACTATATCTGCGAGTACAAGTTCTCCCTTTGGCAATTAT-----------GGCTTTCCCTAGAACCCACACATAGGATTATTATATT----C----GTCTCG----GGTTTTTC----------CTGTGGCTTTGTTAC--------------------------------------------TTCTTACTT-------CTGATTA-------G----------------------------------A-------TCAAA-------AGCG-------AA----------------------------------------AGCGAGA
droEug1 scf7180000406964:105639-105761 - TTTAAT---AT-----------GACTTCATATTGTA----------------------------------------------------------------------------------------------------------------------------------------GTTACTCT---------------GTTAATTTTAAAATAAATACATTAG------------------------------------CTG---------------------TAAATTT-------TATAAA-ACCATCTTTTTACGAA------------A-------CCTGA-------AGCA-------AAGGCAT-A---------------AAT--ATGGT----CTG-ATGTAAT
dm3 chr4:730831-730968 - AAAGTT---CG-----A-----------------------------------------------------------------------------------------------------------AAA-------AGTT---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTTTTCGATTCCAAAGATAGCAAACATCTT---------------TAATGTGTATTT-------AATAAA-----------------------------A-------GTACGAAGAAGAGCACAAAGGGAAA---AG-CTAA-AAGGCTAAATGGGCACACTC-------G-TCGCTCA
droSim2 2r:1879454-1879499 - GTAAAA---TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------AAACTAGCAAA------------------------A-------AAAAAAAAAAAAGCAGGA-----------------------------------------------GAGAACG
droSec2 scaffold_43:137456-137496 - CAGTGT---TG----------TGCATCTATAGCTAGCCAATTCGGCCCTCTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:11533888-11533962 + ACACTG---AA-----A---------------------------------------------------------------------------------------------TAAAAATTATACAAAACCCTCAAATATCAT----------------AACTTC--------------------------------------------------------------AGTT-----------------------------------------------------------------T------TG------------------------CAGTAGT-------------------------------AAT-AACA-----------------ATT-----------TTATTA
droEre2 scaffold_4845:2493527-2493618 - AACAAT---CT-----------TAATCTTAATCTTAACAGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAAGGTTT--T--AAAAAT-------AAGAAAACTTAATAAA-A-------TATAA--------AA-------------------------------AAAC--ACTTG----CAG-ATGTATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAGACA---GCAGTTT-T--CTGAGTCTACAGCTGATCAATTCGGAGCTCTTCATGGTCAGATCATTGGGCTTCTATGAGTACTACATATGCGAATATGAGACACGGCAACAGAAATTATGCAAGATCCTTAAAAACCCC----------------GATTTTTATATT----C----CTTCGGTGGCAATTATTC----------TTGCAATTATATTAG------------------------------------CCGTAAAATT--------------AATATTA-------AAG------AA------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAAGAGGATGAACAGGC--ACTAG----TTGGGTCTAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................GAACAGGC--ACTAG----TTGGGT.....1924.509500004
................................................................................................................................................................................................................................................................................................................................................................G-------AA---AG-CAAAAGAGGATGAACAGGC--A...................2513.003300000
...............................................................................................................................................................................................................................................................................................................AA------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAAGA..................................2312.002100001
......................................AATTCGGAGCTCTTCATGGTC..............................................................................................................................................................................................................................................................................................................................................................2112.002100001
........................GTCTACAGCTGATCAATTCGGAGCT........................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..GACA---GCAGTTT-T--CTGAGT...............................................................................................................................................................................................................................................................................................................................................................................................1821.503300000
.......................................................................................................................................................................................................................................................................................................................................................................................GGATGAACAGGC--ACTAG----TTGGGT.....2321.503300000
........................................................................................................................................................................................................................................................................................................G------AA------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAA....................................2211.001100000
..............................................GCTCTTCATGGTCAGATCAT.......................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................................................................................................................GATCCTTAAAAACCCC----------------GATTTTTAT....................................................................................................................................................................................................................................................2511.001100000
...................................................................................................................ATTATGCAAGATCCTTAAAAACCCC----------------.............................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................................................................ATTA-------AAG------AA------------------------T-------TCAAAA-------AGG-------AA---AG-.........................................2311.001000001
................................................TCTTCATGGTCAGATCATTGGGCTT................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................GTCAGATCATTGGGCTTCTATGA..........................................................................................................................................................................................................................................................................................................................................2311.001000001
..........................CTACAGCTGATCAATTCGGAGCTCTT.....................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.......................................................GGTCAGATCATTGGGCTTCTATGA..........................................................................................................................................................................................................................................................................................................................................2411.001000001
..................................................................................................................................................................................................C----------TTGCAATTATATTAG------------------------------------CCGTAA...................................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................ATTAG------------------------------------CCGTAAAATT--------------AATATT...........................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................G------AA------------------------T-------TCAAAA-------AGG-------AA---AG-C........................................1811.001000100
..........................CTACAGCTGATCAATTCGGAGCTCTTC....................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................................................G-------AA---AG-CAAAAGAGGATGAACAGGC--....................2411.001100000
...........................TACAGCTGATCAATTCGGAG..........................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................ATTA-------AAG------AA------------------------T-------TCAAAA-------AGG-------A................................................2011.001100000
..........................CTACAGCTGATCAATTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................CTACAGCTGATCAATTCGGA...........................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................TCTACAGCTGATCAATTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................A------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAAGAGGAT..............................2611.001000001
............GTTT-T--CTGAGTCTACAGCT.......................................................................................................................................................................................................................................................................................................................................................................................1921.002100001
....................................................................................................................TTATGCAAGATCCTTAAAAACCCC----------------G............................................................................................................................................................................................................................................................2511.001000001
.......................................................................................................................................................................................................................................................................................................AG------AA------------------------T-------TCAAAA-------AGG-------AA---AG-CAAAAGA..................................2511.001100000
...................................................................................................................................................................................................................TTATATTAG------------------------------------CCGTAAAATT--------------A................................................................................................................................2011.001100000
...............................................................................GTACTACATATGCGAATATGAGACACGG..............................................................................................................................................................................................................................................................................................................2821.002200000
................................................................................................................................................................................................................................................................................................................................................................G-------AA---AG-CAAAAGAGGATGAACAGGC--ACT.................2711.001000100
...............................................................................................................................................................................................ATTC----------TTGCAATTATATTAG------------------------------------CC.......................................................................................................................................................2120.501100000
...........................................................................................................CAACAGAAATTATGCAAGATCCTT......................................................................................................................................................................................................................................................................................2420.501100000
....................................................................................................GACACGGCAACAGAAATTATGCAAG............................................................................................................................................................................................................................................................................................2520.501100000
...................................................................................................................................................................................................................................................................................................................................................................................AAGAGGATGAACAGGC--ACTAG----TTGG.......2520.501000001
..............................................................................................ATATGAGACACGGCAACAGA.......................................................................................................................................................................................................................................................................................................2020.501000001
.......................................................................................................................................................................................................................................................................................................................................................................................GGATGAACAGGC--ACTAG----TTGG.......2120.501100000
...................................................................................................................................................................................................................................................................................................................................................................................AAGAGGATGAACAGGC--ACTA................2020.501100000
................................................................................................................................................................................................................................................................................................................................................................................CAAAAGAGGATGAACAGGC--....................1920.501100000
............GTTT-T--CTGAGTCTACAGCTGATC...................................................................................................................................................................................................................................................................................................................................................................................2320.501100000
......................................................................................ATATGCGAATATGAGACACGGCA............................................................................................................................................................................................................................................................................................................2320.501100000
...............................................................................................................AGAAATTATGCAAGATCCTT......................................................................................................................................................................................................................................................................................2020.501100000
.................................................................................................................................................................................................................................................................................................................................................................................AAAAGAGGATGAACAGGC--ACT.................2120.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................ATGAACAGGC--ACTAG----TTGGGT.....2120.501100000
.................................................................................................................................................................................................................................................................................................................................................................................AAAAGAGGATGAACAGGC--....................1820.501100000
...................................................................................TACATATGCGAATATGAGACACGGCAACA.........................................................................................................................................................................................................................................................................................................2920.501100000
............................................................................................................................................................................................ATTATTC----------TTGCAATTATATT...............................................................................................................................................................................................2020.501100000
....................................................................................................................................................................................CGGTGGCAATTATTC----------TTGCA.......................................................................................................................................................................................................2020.501100000
............GTTT-T--CTGAGTCTACAGCTGAT....................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
..............................................................................................................................................................................................................................................................................................................................................................................G-CAAAAGAGGATGAACAGG.......................1920.501000001
.............................................................................................................................................................................................................................................................................................................................................................................AG-CAAAAGAGGATGAACAGG.......................2020.501000001
....................................................................................................................................................................................CGGTGGCAATTATTC----------TTGCAATT....................................................................................................................................................................................................2320.501100000
...ACA---GCAGTTT-T--CTGAGTCTACAGCT.......................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
.............................................................ATCATTGGGCTTCTATGA..........................................................................................................................................................................................................................................................................................................................................1820.501100000
..................................................................................................GAGACACGGCAACAGAAATTATGCAAG............................................................................................................................................................................................................................................................................................2720.501100000
................................................................................................................................................................................................................................................................................................................................................................................CAAAAGAGGATGAACAGGC--ACTAG----TTG........2720.501000001
..............................................................................................................................................................................................................................................................................................................................................................................G-CAAAAGAGGATGAACAGGC--A...................2120.501000001
...........................................................................................................................................................................................................................................................................................................................................................................................GAACAGGC--ACTAG----TTGGGTCT...2120.501100000
..............TT-T--CTGAGTCTACAGCTGATC...................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
.........................................................................................................GGCAACAGAAATTATGCAAGATCCTT......................................................................................................................................................................................................................................................................................2620.501100000
.............................................................................................AATATGAGACACGGCAACAGAAATTATG................................................................................................................................................................................................................................................................................................2820.501100000
...........AGTTT-T--CTGAGTCTACAGC........................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
..............................................................................................................................................................................................................................................................................................................................................................................G-CAAAAGAGGATGAACAGGC--....................2020.501000001
....CA---GCAGTTT-T--CTGAGTCTACAGC........................................................................................................................................................................................................................................................................................................................................................................................2320.501100000
.......................................................................................................................................................................T----C----CTTCGGTGGCAATTATTC----------TTGCA.......................................................................................................................................................................................................2520.501100000
.........................................................................................TGCGAATATGAGACACGGC.............................................................................................................................................................................................................................................................................................................1920.501000001
............................................................................................................................................................GATTTTTATATT----C----CTTCGGTG................................................................................................................................................................................................................................2120.501100000
.............................................................................................AATATGAGACACGGCAACA.........................................................................................................................................................................................................................................................................................................1920.501100000
..............................................................................................................CAGAAATTATGCAAGATCCTT......................................................................................................................................................................................................................................................................................2120.501100000
.................................................................................ACTACATATGCGAATATGAGACACGGCAA...........................................................................................................................................................................................................................................................................................................2920.501100000
droVir3
CGCTCA---ATTCGTT-T--TTGAGCCTGCAGCTTGTCAACTCGGAGCTGTTTATGGTCACATCGTGGGGCTTTGATCAGTTTTATATATGTGAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................TGTTTATGGTCACATCGTGGG....................................................................................................................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.....................................CAACTCGGAGCTGTTTATGGTC..............................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000020
....................................TCAACTCGGAGCTGTTTATGG................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................TGCAGCTTGTCAACTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
............................GCAGCTTGTCAACTCGGAG..........................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................GTCACATCGTGGGGCTTTGATCA..........................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................ACTCGGAGCTGTTTATGGTCA.............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................................................................GTGGGGCTTTGATCAGTTTTAT...................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
..............TT-T--TTGAGCCTGCAGCTTGTC...................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
................................................TGTTTATGGTCACATCGTGGGGCTTTGA.............................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000001000
.................................................GTTTATGGTCACATCGTGGGG...................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............CGTT-T--TTGAGCCTGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................GCAGCTTGTCAACTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.........ATTCGTT-T--TTGAGCCTGCAGCTTGTC...................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........TTCGTT-T--TTGAGCCTGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................TGTTTATGGTCACATCGTGG.....................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................GCCTGCAGCTTGTCAACTCGGAGCT........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
.................................TTGTCAACTCGGAGCTGTTTATGGT...............................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................TCGTGGGGCTTTGATCAGT........................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................AGCCTGCAGCTTGTCAACTCGGAGCT........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
.........ATTCGTT-T--TTGAGCCTGCA..........................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.....A---ATTCGTT-T--TTGAGCCTGCAG.........................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........TCGTT-T--TTGAGCCTGCAGCTT......................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........ATTCGTT-T--TTGAGCCTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droGri2
AGGGTT---T-------T--GTGGGTCTGCAACTGATCGGCAAGGAGCTGTTCATGTTCAGATCGTGGGGTTATGATCAGTTTTATATATGTGAAGAAAACTCGATAT-----------TGCAAAAGCTTTGGTTACTCCTAGATAG-----------TGTTTATACT----C-----------------------------------------------------------------------------TTATATTCATTACATT--------------TGTTTTA-------GTTCTATTAAT--TTGTTAT--------------------------------AAAATACGA-----------------------------------------------CGAGAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................ACTGATCGGCAAGGAGCTGTT.....................................................................................................................................................................................................................................................................................................................................................................2112.00211
......................................................................................................................................................................................................................................................................CATT--------------TGTTTTA-------GTTCTATTA..........................................................................................................2011.00110
.................................................GTTCATGTTCAGATCGTGGGG...................................................................................................................................................................................................................................................................................................................................................2111.00110
....................................................................................................CTCGATAT-----------TGCAAAAGCTTTGG....................................................................................................................................................................................................................................................................................2211.00110
.................................................GTTCATGTTCAGATCGTGGGGT..................................................................................................................................................................................................................................................................................................................................................2211.00101
..................................GATCGGCAAGGAGCTGTT.....................................................................................................................................................................................................................................................................................................................................................................1811.00110
.........................................................................................TGTGAAGAAAACTCGATAT-----------TGCAAAAGC.........................................................................................................................................................................................................................................................................................2811.00101
............................................................GATCGTGGGGTTATGATC...........................................................................................................................................................................................................................................................................................................................................1811.00110
........................................................................................................................GCAAAAGCTTTGGTTACTCCTAGATA.......................................................................................................................................................................................................................................................................2611.00110
..............................................................................................................................................GATAG-----------TGTTTATACT----C-----------------------------------------------------------------------------TTATATTC.......................................................................................................................................................2411.00110
..........................................................................................................................................CCTAGATAG-----------TGTTTATACT----.............................................................................................................................................................................................................................................1911.00110
.........................................................................................TGTGAAGAAAACTCGATAT-----------TG................................................................................................................................................................................................................................................................................................2111.00110
....................................................CATGTTCAGATCGTGGGGTTATGATCA..........................................................................................................................................................................................................................................................................................................................................2711.00101
.............................................................................................................................AGCTTTGGTTACTCCTAGATAG-----------TGTTT......................................................................................................................................................................................................................................................2711.00101
...............................ACTGATCGGCAAGGAGCTGTTCATG.................................................................................................................................................................................................................................................................................................................................................................2511.00101
..................................................................................................................................TGGTTACTCCTAGATAG-----------TG.........................................................................................................................................................................................................................................................1911.00110
............................GCAACTGATCGGCAAGGAGCTGTT.....................................................................................................................................................................................................................................................................................................................................................................2411.00101
..............................................................................................................................GCTTTGGTTACTCCTAGATAG-----------TGTT.......................................................................................................................................................................................................................................................2511.00101
........................................................................................ATGTGAAGAAAACTCGATA..............................................................................................................................................................................................................................................................................................................1911.00110
.......................................................................................................................................ACTCCTAGATAG-----------TGTTTATACT----.............................................................................................................................................................................................................................................2211.00110
.........................................AAGGAGCTGTTCATGTTCAG............................................................................................................................................................................................................................................................................................................................................................2011.00110
.................................................GTTCATGTTCAGATCGTGGGGTTA................................................................................................................................................................................................................................................................................................................................................2411.00101
....................GTGGGTCTGCAACTGATCGG.................................................................................................................................................................................................................................................................................................................................................................................2011.00110
.......................GGTCTGCAACTGATCGGCAAG.............................................................................................................................................................................................................................................................................................................................................................................2111.00101
....................................................CATGTTCAGATCGTGGGGTTATG..............................................................................................................................................................................................................................................................................................................................................2311.00101
droWil2
TGAAAA---TCAG-GA-TGTCTACATTTGGAATGAA----------------------------------------------------------------------------------------------------------------------------------------ATTATTTT---------------GCCAGTTTTCGTGTCACA-TATTGA------------------------------------AAG------T----AATAGAAGCA-------------C------TT------------------------AAAGAGG-------------------------------TGA-CAACATAGATTGAACAA----ATT-----------CGATATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATCTCG---AC------------------------------------------------------------------------------------------------------------------AT-------TTTT------------------------------TCCA------------------------------------------------ATGCAGTTTTGTGCGCAATTATATTTCTAATAATAATCATTACATT--------------AATATTT-------AAGCTAAGAAG------------------------A-------AGAA---------GAA-------AAAATAAA----------------AAA--GCGATATCCATG-AGCTGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ACATTT---TT-------------------------------------------------------------------------------------------------------------------------------------------------------------TCCA------------------------------------------------ATGCAGTTTTGTGTGCAATTATATTTATAATAATAGTCATTACATT--------------AATATTT-------AAGCTAAGAAG------------------------A-------A------------GAA-------AAAATAAA----------------AAA--GCGATATCCAT--GAGCTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATTAGC---CA----------------------------------------------------------------------------------------------------------------CAATCCTTAAACCCCCC----------------GATTTTCAACCT----C----CTTTTTT-----TTTTTT----------TTGCTCTT-TCTTGG------------------------------------CCGT--------------------------------------------------------------------------------------CAAATGGGG-----------------------------------------------ATGGAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAGAAA---AT-CATA-T--CTCAGTCTCCAGCTGATCAACTCCACGTTGTACATGCAGGAATCTCTTGGCCAAGCCGACTACTACATCTGTGAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGASizeHit CountTotal NormTotal
No Reads
droKik1
ATACAT---GA-----A---------ATGTGGCACGTCAACTAGG----------------------------------------------------------------------GTTGT-CGAAAT-------ATTT------------------------------ACAA------------------------------------------------ATATTGTATCGATGATATTTATTATTGAAAC--AAAATATTAAAAT--------------GATATTT-------GATATA-----------------------------T-------CAGAA--------AA--------------------------------------------------AAATATCSizeHit CountTotal NormTotal
No Reads
droFic1
TTTTGA---TA----------TACTTTCTAAGCTA-----------------------------------------------------------------------------------------------------------------------------------------ATTATTCT---------------TTT-GTTTTCCTAT--------------------------------------------TGCTCTTTAACTC--------------AATACCTAAAGTTT------TA------------------------GAAAAGG-------------------------------AAA-CACT-----------------ACTCA----ATC-ATTTGGTSizeHit CountTotal NormTotal
No Reads
droEle1
AGGAGGTGAGAAGCTA-T--CTCAGTCTGGAACTGGCCAATTCCTCGCTGTACATGCGACCAGCTTTCGGCCACGACGACTACTATATCTGCGAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAASizeHit CountTotal NormTotal
No Reads
droRho1
AAACAT---TA-----A---------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTTA----T----CCATCG------TTTTTT----------TTGTATACCTAATAAATATT----------------------------------TAAAGCT-AATATTATAAGTT-------------T------AT------------------------AAAAAGTTAAACTATTTATAATAACACGA-----------------------------------------------ATTGAATSizeHit CountTotal NormTotal
No Reads
droBia1
GAGAAA---TG-----------------------------------------------------------------------------------------------ACAAAAAAACCTGTGCACGTTCCACAAAAATATT----------------AATTTTTACACT----T----AAATCG------C---------------------------------------------------------G----------TC---------------TAATTGTCGTTT-------AATAAA-----------------------------A-------------------TGAATA-----------------------------------------------TTAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
GACGGA---AC--CTA-T--CTCAGCCTGCAATTGGTGAACTCCACGCTGTACATGCGACCATCTTATGGGGAAGATGACTACTATATCTGCGAGTACAAGTTCTCCCTTTGGCAATTAT-----------GGCTTTCCCTAGAACCCACACATAGGATTATTATATT----C----GTCTCG----GGTTTTTC----------CTGTGGCTTTGTTAC--------------------------------------------TTCTTACTT-------CTGATTA-------G----------------------------------A-------TCAAA-------AGCG-------AA----------------------------------------AGCGAGASizeHit CountTotal NormTotal
No Reads
droEug1
TTTAAT---AT-----------GACTTCATATTGTA----------------------------------------------------------------------------------------------------------------------------------------GTTACTCT---------------GTTAATTTTAAAATAAATACATTAG------------------------------------CTG---------------------TAAATTT-------TATAAA-ACCATCTTTTTACGAA------------A-------CCTGA-------AGCA-------AAGGCAT-A---------------AAT--ATGGT----CTG-ATGTAATSizeHit CountTotal NormTotal
No Reads
dm3
AAAGTT---CG-----A-----------------------------------------------------------------------------------------------------------AAA-------AGTT---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTTTTCGATTCCAAAGATAGCAAACATCTT---------------TAATGTGTATTT-------AATAAA-----------------------------A-------GTACGAAGAAGAGCACAAAGGGAAA---AG-CTAA-AAGGCTAAATGGGCACACTC-------G-TCGCTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................AATAAA-----------------------------A-------GTACGAAGAAGAGC..........................................................2118.0080000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAATGGGCACACTC-------G-TCGCT..2115.0050000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ATAAA-----------------------------A-------GTACGAAGAAGAGCAA........................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTGTTTTCGATTCCAAAGATA................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ATTGTTTTCGATTCCAAAGAT.................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AAGGGAAA---AG-CTAA-AAGGCTA.............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................T-------AATAAA-----------------------------A-------GTACGAAGAAGAG...........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AAGGGAAA---AG-CTAA-AAGGCTAAATGGGC......................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AGAAGAGCACAAAGGGAAA---AG-.........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTAAATGGGCACACTC-------G-TCGC...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GAAGAAGAGCACAAAGGGAAA---............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ACAAAGGGAAA---AG-CTAA-AAG.................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AAAGGGAAA---AG-CTAA-AAGGCT..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CGAAGAAGAGCACAAAGGGAA................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AATGGGCACACTC-------G-TCGCTCA2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GAAGAAGAGCACAAAGGGAA................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ACCATTTT-----------------------------------------------ATTGTTTTCGATT.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TT-----------------------------------------------ATTGTTTTCGATTCCAAAG...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ATAAA-----------------------------A-------GTACGAAGAAGAGCA.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................A-----------------------------A-------GTACGAAGAAGAGCACAAAGG...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CATTTT-----------------------------------------------ATTGTTTTCGATTCC.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCTAAATGGGCACACTC-------G-TCG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................GTT---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTT................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................T---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTTTTCGAT..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ATAGCAAACATCTT---------------TAATGTG...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCACAAAGGGAAA---AG-CTAA-AAGGC...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAATGGGCACACTC-------G-TCGC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AAGAGCACAAAGGGAAA---AG-CT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CACAAAGGGAAA---AG-CTAA-AAGGCT..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................T-----------------------------------------------ATTGTTTTCGATTCCAAAGA..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................T-------AATAAA-----------------------------A-------GTACGAAGAAGA............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................T---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTTTTCGATT.........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAA-AAGGCTAAATGGGCACACTC-------G-TCGCT..2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CTAA-AAGGCTAAATGGGCAA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGGCTAAATGGGCACACTC-------G-TCGCTA.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CAAAGGGAAA---AG-CTAA-AAGGCTAAA...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGTTTTCGATTCCAAAGATAGCAAA...........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................A----ACCATTTT-----------------------------------------------ATTGTTTTCGAT..........................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAA-AAGGCTAAATGGGCACACTC-------G-TC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ACAAAGGGAAA---AG-CTAA-AAGGC...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ACGAAGAAGAGCACAAAGGGA.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........G-----A-----------------------------------------------------------------------------------------------------------AAA-------AGTT---------------------------CCA----ACCATTTT-----------------------------------------------ATTGTT................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGGCTAAATGGGCACACTC-------G-.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGATAGCAAACATCTT---------------TAATGTGT..............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................A-AAGGCTAAATGGGCACACTC-------.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ACGAAGAAGAGCACAAAGGTC.................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ACGAAGAAGAGCACAAAGCTC.................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droSim2
GTAAAA---TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------AAACTAGCAAA------------------------A-------AAAAAAAAAAAAGCAGGA-----------------------------------------------GAGAACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................ACTAGCAAA------------------------A-------AAAAAAAAACT.............................................................21200.05100000000000010000
droSec2
CAGTGT---TG----------TGCATCTATAGCTAGCCAATTCGGCCCTCTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................CATCTATAGCTAGCCAATTCG.............................................................................................................................................................................................................................................................................................................................................................................2150.2010001
CAGTGT---TG----------TGCATCTATAGCT.......................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
droYak3
ACACTG---AA-----A---------------------------------------------------------------------------------------------TAAAAATTATACAAAACCCTCAAATATCAT----------------AACTTC--------------------------------------------------------------AGTT-----------------------------------------------------------------T------TG------------------------CAGTAGT-------------------------------AAT-AACA-----------------ATT-----------TTATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AACAAT---CT-----------TAATCTTAATCTTAACAGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAAGGTTT--T--AAAAAT-------AAGAAAACTTAATAAA-A-------TATAA--------AA-------------------------------AAAC--ACTTG----CAG-ATGTATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 12:33 AM