ID:

dmo_146

Coordinate:

scaffold_6540:26449303-26449365 +

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

intergenic

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.2 -33.2 -32.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CTGCTGCCTGATATTTCTTTTTTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACACACAGCGAAAACATGGCCAAGAGACCATTA

***********************************(((((.((((.((.(((((.((((((((((((.(((((................))))))))))).)))))).))))).)).)))).))))).***********************************
Read size # Mismatch Hit Count Total Norm Total M060

embryo

M046

female body

V110

male body
V056

head

V049

head

V041

embryo

............................................................................................TGACTAGATTTCATGCTCGTCT................................................. 22 0 1 42058.00 42058 13523 16519 1863 4827 3733 1593
............................................................................................TGACTAGATTTCATGCTCGTC.................................................. 21 0 1 16210.00 16210 3056 6353 1790 2580 2025 406
............................................................................................TGACTAGATTTCATGCTCGT................................................... 20 0 1 14912.00 14912 785 3012 6000 2263 1722 1130
............................................................................................TGACTAGATTTCATGCTCGTCTA................................................ 23 0 1 10473.00 10473 1855 4940 443 766 597 1872
.................................................GGCGAACATGGATCTAGTGCACG........................................................................................... 23 0 1 4285.00 4285 2422 347 646 151 88 631
..................................................GCGAACATGGATCTAGTGCACG........................................................................................... 22 0 1 4004.00 4004 1193 606 1246 410 220 329
............................................................................................TGACTAGATTTCATGCTCGTCC................................................. 22 1 1 3654.00 3654 3614 20 2 7 8 3
............................................................................................TTACTAGATTTCATGCTCGTCT................................................. 22 1 1 3639.00 3639 3624 8 3 2 1 1
.............................................................................................GACTAGATTTCATGCTCGTCT................................................. 21 0 1 1213.00 1213 15 1197 1 0 0 0
............................................................................................TTACTAGATTTCATGCTCGTCC................................................. 22 2 1 992.00 992 992 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCA................................................. 22 1 1 895.00 895 142 628 6 15 11 93
............................................................................................TTACTAGATTTCATGCTCGTC.................................................. 21 1 1 803.00 803 794 4 3 2 0 0
............................................................................................TGACTAGATTTCATGCTCG.................................................... 19 0 1 792.00 792 15 573 80 54 44 26
.................................................GGCGAACATGGATCTAGTGCAC............................................................................................ 22 0 1 646.00 646 569 19 11 7 4 36
.................................................GTCGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 568.00 568 566 0 2 0 0 0
............................................................................................TGATTAGATTTCATGCTCGTCT................................................. 22 1 1 539.00 539 531 0 2 3 2 1
............................................................................................TGACTAGATTTCATGCTCGTCTC................................................ 23 1 1 509.00 509 18 380 21 39 34 17
..............................................................................................ACTAGATTTCATGCTCGTCT................................................. 20 0 1 480.00 480 44 318 112 5 0 1
............................................................................................TTACTAGATTTCATGCTCGTCTA................................................ 23 1 1 477.00 477 475 0 1 0 0 1
.............................................................................................GACTAGATTTCATGCTCGTC.................................................. 20 0 1 454.00 454 3 446 1 3 0 1
..................................................GCGAACATGGATCTAGTGCAC............................................................................................ 21 0 1 405.00 405 214 113 26 19 21 12
.............................................................................................GACTAGATTTCATGCTCGTCTA................................................ 22 0 1 356.00 356 2 354 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTT................................................ 23 1 1 284.00 284 43 128 17 43 38 15
.................................................GGCGAACATGGATCTAGTGCA............................................................................................. 21 0 1 274.00 274 179 12 25 6 5 47
............................................................................................TGACTAGATTTCATGCTCT.................................................... 19 1 1 264.00 264 260 2 1 1 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAA............................................... 24 1 1 223.00 223 31 185 1 0 0 6
.............................................................................................GACTAGATTTCATGCTCGT................................................... 19 0 1 215.00 215 0 209 2 3 1 0
............................................................................................TTACTAGATTTCATGCTCGT................................................... 20 1 1 210.00 210 200 2 7 0 1 0
............................................................................................TGACTAGATTTCATGCTCGC................................................... 20 1 1 174.00 174 152 4 1 13 3 1
............................................................................................TGCCTAGATTTCATGCTCGTCT................................................. 22 1 1 165.00 165 161 0 0 2 1 1
............................................................................................TGACTAGATTTCATGCTCGTCTAT............................................... 24 0 1 162.00 162 50 101 1 2 0 8
............................................................................................TGATTAGATTTCATGCTCGTCC................................................. 22 2 1 148.00 148 148 0 0 0 0 0
.................................................GTCGAACATGGATCTAGTGCAC............................................................................................ 22 1 1 141.00 141 141 0 0 0 0 0
.................................................GGCGAACATGGATCTAGTGC.............................................................................................. 20 0 1 131.00 131 103 5 0 0 1 22
............................................................................................TGATTAGATTTCATGCTCGTC.................................................. 21 1 1 124.00 124 124 0 0 0 0 0
............................................................................................TTATTAGATTTCATGCTCGTCT................................................. 22 2 1 123.00 123 123 0 0 0 0 0
..................................................GCGAACATGGATCTAGTGCACGG.......................................................................................... 23 0 1 116.00 116 51 25 25 5 1 9
.................................................GGAGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 107.00 107 102 0 0 1 0 4
............................................................................................TGACTAGATTTCATTCTCGTCT................................................. 22 1 1 104.00 104 49 5 1 5 39 5
............................................................................................TGACTAGATTTCATGCTCGTCTCC............................................... 24 2 1 102.00 102 7 94 1 0 0 0
............................................................................................TGACTAGATTTCCTGCTCGTCT................................................. 22 1 1 102.00 102 64 0 0 8 23 7
............................................................................................TGACTAGATTTCATGCTCTTCT................................................. 22 1 1 101.00 101 48 9 2 16 23 3
............................................................................................TGACTAGATTTCATGCTCCTCT................................................. 22 1 1 100.00 100 82 3 2 7 6 0
..............................................................................................ACTAGATTTCATGCTCGTCTA................................................ 21 0 1 95.00 95 6 65 21 1 0 2
............................................................................................TCACTAGATTTCATGCTCGTCT................................................. 22 1 1 94.00 94 75 7 3 2 6 1
............................................................................................TGACTAGATTTCATGCTCGTCTATC.............................................. 25 1 1 92.00 92 16 75 0 1 0 0
..................................................GCGAACATGGATCTAGTGCA............................................................................................. 20 0 1 88.00 88 31 27 16 7 3 4
............................................................................................TGACTAGATTTCATGCTCGTCAAA............................................... 24 2 1 88.00 88 3 85 0 0 0 0
............................................................................................TAACTAGATTTCATGCTCGTCT................................................. 22 1 1 88.00 88 72 2 1 5 5 3
............................................................................................TGACTAGATTTGATGCTCGTCT................................................. 22 1 1 85.00 85 1 81 1 0 2 0
............................................................................................TGACTAGCTTTCATGCTCGTCT................................................. 22 1 1 84.00 84 51 0 1 8 20 4
............................................................................................TGACTAGATTTCATGCTCC.................................................... 19 1 1 82.00 82 81 1 0 0 0 0
............................................................................................TGACTAGATTTAATGCTCGTCT................................................. 22 1 1 80.00 80 29 43 1 4 2 1
...........................................................................................CTGACTAGATTTCATGCTCGTCT................................................. 23 1 1 78.00 78 57 14 0 5 1 1
............................................................................................TGACTAGATTTCATGCTCGTCTAAA.............................................. 25 2 1 72.00 72 0 71 0 0 0 1
..................................................GCGTACATGGATCTAGTGCACG........................................................................................... 22 1 1 69.00 69 69 0 0 0 0 0
...................................................CGAACATGGATCTAGTGCACG........................................................................................... 21 0 1 69.00 69 10 57 2 0 0 0
............................................................................................TGACTAGATTTCATGCTCGCCT................................................. 22 1 1 69.00 69 36 9 1 13 8 2
................................................CGGCGAACATGGATCTAGTGCACG........................................................................................... 24 0 1 67.00 67 40 6 5 7 2 7
...........................................................................................GTGACTAGATTTCATGCTCGTCT................................................. 23 0 1 67.00 67 18 16 8 3 4 18
............................................................................................TGACTAGATTTCGTGCTCGTCT................................................. 22 1 1 65.00 65 3 8 4 23 20 7
............................................................................................TGATTAGATTTCATGCTCGTCTA................................................ 23 1 1 62.00 62 62 0 0 0 0 0
............................................................................................TGACTAGATTTCATCCTCGTCT................................................. 22 1 1 62.00 62 39 6 1 7 7 2
.................................................GGCTAACATGGATCTAGTGCACG........................................................................................... 23 1 1 60.00 60 60 0 0 0 0 0
............................................................................................TGACTATATTTCATGCTCGTCT................................................. 22 1 1 60.00 60 46 6 2 4 1 1
............................................................................................TGACTAGATTTCATGCTCGTCTCCC.............................................. 25 3 1 60.00 60 0 60 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCAA................................................ 23 1 1 57.00 57 4 53 0 0 0 0
............................................................................................CGACTAGATTTCATGCTCGTCT................................................. 22 1 1 55.00 55 29 5 1 12 7 1
............................................................................................TGACTAGATTTCATGATCGTCT................................................. 22 1 1 52.00 52 3 5 1 27 11 5
............................................................................................TGACTAGATTTCATGCTCGTT.................................................. 21 1 1 51.00 51 2 13 16 11 9 0
.............................................................................................GACTAGATTTCATGCTCG.................................................... 18 0 1 50.00 50 0 49 0 0 1 0
............................................................................................TGACTAGATTTCATACTCGTCT................................................. 22 1 1 50.00 50 25 7 0 6 12 0
.................................................GTCGAACATGGATCTAGTGCA............................................................................................. 21 1 1 50.00 50 50 0 0 0 0 0
............................................................................................TGACTAGATTTCATTCTCGTC.................................................. 21 1 1 49.00 49 21 5 0 5 18 0
............................................................................................TGATTAGATTTCATGCTCGT................................................... 20 1 1 49.00 49 42 0 1 5 0 1
.................................................GTAGAACATGGATCTAGTGCACG........................................................................................... 23 2 1 46.00 46 46 0 0 0 0 0
............................................................................................TGGCTAGATTTCATGCTCGTCT................................................. 22 1 1 46.00 46 9 9 0 15 4 9
............................................................................................TGACTAGATTTCTTGCTCGTCT................................................. 22 1 1 44.00 44 0 0 0 19 22 3
.............................................................................................GACTAGATTTCATGCTCGTCA................................................. 21 1 1 44.00 44 0 44 0 0 0 0
............................................................................................TGACTAGACTTCATGCTCGTCT................................................. 22 1 1 44.00 44 26 9 0 4 2 3
..................................................GGGAACATGGATCTAGTGCACG........................................................................................... 22 1 1 43.00 43 43 0 0 0 0 0
.................................................GGCGAACATGGATCTAGTGCACT........................................................................................... 23 1 1 43.00 43 37 2 2 1 1 0
...............................................................................................CTAGATTTCATGCTCGTCT................................................. 19 0 1 43.00 43 7 27 5 1 2 1
........................................................................GTTGTTCATGATTAAGTTCG....................................................................... 20 0 1 42.00 42 10 14 6 1 0 11
............................................................................................TGACTAGATTTCATGCTCGTCTAG............................................... 24 1 1 42.00 42 10 30 0 0 0 2
............................................................................................TGACTAGATTTCATGCTCTCC.................................................. 21 2 1 41.00 41 41 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAC............................................... 24 1 1 41.00 41 19 21 0 0 0 1
.................................................TGCGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 41.00 41 40 0 1 0 0 0
............................................................................................TGACTAGATTTCATGCTCTA................................................... 20 2 2 40.50 81 81 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCCTCTA................................................ 23 1 1 39.00 39 35 0 0 1 1 2
..................................................GCCAACATGGATCTAGTGCACG........................................................................................... 22 1 1 39.00 39 38 0 1 0 0 0
.................................................GGCGAACATGGATCTAGTGCACGT.......................................................................................... 24 1 1 39.00 39 16 5 8 2 1 7
............................................................................................TGACTAGATTTCATGCTCGAC.................................................. 21 1 1 37.00 37 33 0 1 2 1 0
..................................................GCGAACATGGATCTAGTGC.............................................................................................. 19 0 1 37.00 37 10 13 9 2 3 0
............................................................................................TGACTAGATTTCATGTTCGTCT................................................. 22 1 1 37.00 37 31 1 0 2 3 0
............................................................................................TGACTAGATTTCACGCTCGTCT................................................. 22 1 1 36.00 36 11 9 1 7 7 1
............................................................................................TGACTAGATTTGATGCTCGTCTA................................................ 23 1 1 36.00 36 0 34 0 2 0 0
...................................................CGAACATGGATCTAGTGCACGG.......................................................................................... 22 0 1 36.00 36 6 15 12 2 1 0
..................................................GCGAACATGGATCTAGTGCACGT.......................................................................................... 23 1 1 36.00 36 15 13 5 3 0 0
............................................................................................TGACTAGATTCCATGCTCGTCT................................................. 22 1 1 36.00 36 15 1 0 11 7 2
............................................................................................TGCCTAGATTTCATGCTCGTC.................................................. 21 1 1 35.00 35 32 0 0 2 1 0
............................................................................................TTACTAGATTTCATGCTCGC................................................... 20 2 1 35.00 35 35 0 0 0 0 0
............................................................................................TGACTGGATTTCATGCTCGTCT................................................. 22 1 1 35.00 35 23 5 1 4 2 0
............................................................................................TTACTAGATTTCATGCTCGTCA................................................. 22 2 1 35.00 35 34 1 0 0 0 0
............................................................................................TGACTAGATTTCATGCTC..................................................... 18 0 1 34.00 34 18 11 0 3 1 1
............................................................................................TGACTAGATTTCTTGCTCGT................................................... 20 1 1 34.00 34 0 0 0 15 13 6
..................................................GCGAACATGGATCTAGTGCACGGT......................................................................................... 24 0 1 33.00 33 10 6 9 2 3 3
............................................................................................TGACTAGATTTCATGCTCGTCTG................................................ 23 1 1 33.00 33 2 27 0 1 1 2
............................................................................................TTCCTAGATTTCATGCTCGTCT................................................. 22 2 1 33.00 33 33 0 0 0 0 0
............................................................................................TGACTAGGTTTCATGCTCGTCT................................................. 22 1 1 33.00 33 3 2 0 12 13 3
............................................................................................TGACTCGATTTCATGCTCGTCT................................................. 22 1 1 32.00 32 0 0 0 8 22 2
.................................................GTCGAACATGGATCTAGTGC.............................................................................................. 20 1 1 32.00 32 32 0 0 0 0 0
............................................................................................TGACTAGATTTCATGATCGT................................................... 20 1 1 32.00 32 0 0 4 8 11 9
............................................................................................TGACTAGATTTCATTCTCGT................................................... 20 1 1 32.00 32 5 1 9 6 10 1
............................................................................................TGACTAGATTTTATGCTCGTCT................................................. 22 1 1 32.00 32 14 10 0 2 3 3
............................................................................................TTACTAGCTTTCATGCTCGTCT................................................. 22 2 1 31.00 31 30 0 0 0 1 0
............................................................................................TGACTAGATTTCATGCTCGGCT................................................. 22 1 1 31.00 31 12 0 2 9 6 2
................................................................................................TAGATTTCATGCTCGTCT................................................. 18 0 1 31.00 31 17 10 0 2 1 1
............................................................................................TTATTAGATTTCATGCTCGTCC................................................. 22 3 1 31.00 31 31 0 0 0 0 0
............................................................................................GGACTAGATTTCATGCTCGTCT................................................. 22 1 1 30.00 30 13 5 0 8 4 0
............................................................................................TGACTAGATTTCCTGCTCGTC.................................................. 21 1 1 30.00 30 12 0 1 5 10 2
............................................................................................TGACTAGATTTAATGCTCGTC.................................................. 21 1 1 30.00 30 9 18 1 1 1 0
............................................................................................TGACTAGATTTCATGCTCCTCC................................................. 22 2 1 29.00 29 29 0 0 0 0 0
............................................................................................TGACTAGATTTGATGCTCGTC.................................................. 21 1 1 29.00 29 0 27 0 2 0 0
............................................................................................TGACTAGATTTCATGCTCGCC.................................................. 21 1 1 29.00 29 7 4 2 8 8 0
............................................................................................TGACTAGATTTCATGCTCGTTT................................................. 22 1 1 29.00 29 10 7 1 5 6 0
............................................................................................TGACTAGATTTCATGCTCTTC.................................................. 21 1 1 29.00 29 7 1 1 9 10 1
..............................................................................................ACTAGATTTCATGCTCGTC.................................................. 19 0 1 29.00 29 2 17 9 1 0 0
...........................................................................................GTGACTAGATTTCATGCTCGT................................................... 21 0 1 27.00 27 0 6 11 3 5 2
............................................................................................TGACTAGATTTCATGCTTGTCT................................................. 22 1 1 27.00 27 11 5 1 4 4 2
...........................................................................................GTGACTAGATTTCATGCTCGTC.................................................. 22 0 1 26.00 26 9 6 1 6 2 2
............................................................................................TGACCAGATTTCATGCTCGTCT................................................. 22 1 1 26.00 26 4 9 1 5 6 1
............................................................................................TGACTAGATCTCATGCTCGTCT................................................. 22 1 1 26.00 26 6 3 2 11 2 2
............................................................................................TGACTAGATTTCATGCTCGTA.................................................. 21 1 1 26.00 26 4 8 7 2 4 1
.................................................GGCGAACATGGATCTAGTGCACC........................................................................................... 23 1 1 26.00 26 25 0 0 0 0 1
............................................................................................AGACTAGATTTCATGCTCGTCT................................................. 22 1 1 26.00 26 15 4 0 3 3 1
............................................................................................TTATTAGATTTCATGCTCGTC.................................................. 21 2 1 26.00 26 26 0 0 0 0 0
............................................................................................TGACTAGCTTTCATGCTCGTC.................................................. 21 1 1 26.00 26 14 1 1 0 8 2
............................................................................................TGACTAGATTTCATTCTCGTCTA................................................ 23 1 1 25.00 25 12 2 2 1 6 2
............................................................................................TCACTAGATTTCATGCTCGTCC................................................. 22 2 1 25.00 25 25 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCATCT................................................. 22 1 1 25.00 25 2 4 0 7 11 1
................................................CGGCGAACATGGATCTAGTGCAC............................................................................................ 23 0 1 25.00 25 24 0 0 0 0 1
.............................................................................................GACTAGATTTCATGCTCGTCTC................................................ 22 1 1 25.00 25 0 25 0 0 0 0
............................................................................................TGCCTAGATTTCATGCTCGTCTA................................................ 23 1 1 25.00 25 23 0 0 0 2 0
............................................................................................TGACTAGATTGCATGCTCGTCT................................................. 22 1 1 25.00 25 1 3 0 13 7 1
............................................................................................TGACTAGATTTCATGCTCTTCTA................................................ 23 1 1 24.00 24 17 0 1 3 2 1
............................................................................................TGACTAGATTTCATGCTCGTCTACC.............................................. 25 2 1 24.00 24 2 22 0 0 0 0
..................................................GCGAACATGGATCTAGTGCCCG........................................................................................... 22 1 1 24.00 24 0 0 0 3 13 8
............................................................................................TGACTAGCTTTCATGCTCGT................................................... 20 1 1 23.00 23 4 0 5 1 12 1
............................................................................................TGACTAGGTTTCATGCTCGT................................................... 20 1 1 23.00 23 1 0 6 10 4 2
.................................................GCCGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 22.00 22 21 1 0 0 0 0
............................................................................................TTACTATATTTCATGCTCGTCT................................................. 22 2 1 22.00 22 21 1 0 0 0 0
............................................................................................TTATTAGATTTCATGCTCGTCTA................................................ 23 2 1 21.00 21 21 0 0 0 0 0
............................................................................................TGACTAGATTTCTTGCTCGTC.................................................. 21 1 1 21.00 21 0 0 0 13 8 0
............................................................................................TGACTAGATTTCATGCCCGTCT................................................. 22 1 1 21.00 21 6 4 1 7 3 0
............................................................................................TGACTAGATTTCGTGCTCGT................................................... 20 1 1 21.00 21 0 1 4 8 4 4
.................................................GGAGAACATGGATCTAGTGCAC............................................................................................ 22 1 1 21.00 21 21 0 0 0 0 0
............................................................................................TGACTAGATTTCATCCTCGTC.................................................. 21 1 1 21.00 21 13 3 0 4 1 0
...........................................................................................CTGACTAGATTTCATGCTCGTC.................................................. 22 1 1 21.00 21 7 4 1 7 2 0
............................................................................................TGACTATATTTCATGCTCGTC.................................................. 21 1 1 20.00 20 9 4 3 2 2 0
............................................................................................TGACTAGATTTCATACTCGTC.................................................. 21 1 1 20.00 20 7 2 2 3 5 1
............................................................................................TTACTAGATTTCCTGCTCGTCT................................................. 22 2 1 20.00 20 20 0 0 0 0 0
............................................................................................TAACTAGATTTCATGCTCGTCTA................................................ 23 1 1 20.00 20 13 1 0 1 2 3
..................................................GCGAACATGGCTCTAGTGCACG........................................................................................... 22 1 1 20.00 20 16 0 0 1 3 0
....................................................GAACATGGATCTAGTGCACG........................................................................................... 20 0 1 20.00 20 8 4 6 1 1 0
............................................................................................TGACTAGATTTGATGCTCGT................................................... 20 1 1 20.00 20 1 17 0 0 2 0
..................................................GCGAGCATGGATCTAGTGCACG........................................................................................... 22 1 1 19.00 19 1 1 8 6 2 1
............................................................................................TGACTAGATTTCATGCTCCTC.................................................. 21 1 1 19.00 19 5 0 0 8 5 1
............................................................................................TGACTAGATTTCATGCTCGTCTAAAA............................................. 26 2 1 19.00 19 1 18 0 0 0 0
............................................................................................TGACTAGATTTAATGCTCGT................................................... 20 1 1 19.00 19 1 9 1 2 2 4
............................................................................................TGACTAGATTTAATGCTCGTCTA................................................ 23 1 1 19.00 19 2 15 0 1 0 1
............................................................................................TGACTAGATTTCATGCTCTCT.................................................. 21 3 7 18.43 129 128 1 0 0 0 0
............................................................................................TAACTAGATTTCATGCTCGTC.................................................. 21 1 1 18.00 18 13 1 0 1 3 0
.................................................GGCGAACATGGATCTAGTGCCCG........................................................................................... 23 1 1 18.00 18 0 0 0 0 4 14
...........................................................................................CTGACTAGATTTCATGCTCGTCC................................................. 23 2 1 18.00 18 18 0 0 0 0 0
............................................................................................TGACTAGATTTCGTGCTCGTC.................................................. 21 1 1 18.00 18 2 3 0 6 5 2
............................................................................................TGACTAGATGTCATGCTCGTCT................................................. 22 1 1 17.00 17 1 1 0 8 3 4
............................................................................................CGACTAGATTTCATGCTCGT................................................... 20 1 1 17.00 17 1 2 7 3 3 1
............................................................................................TGACTAGATTTCGTGCTCGTCTA................................................ 23 1 1 17.00 17 1 2 1 8 2 3
............................................................................................TGACTAGATTTCATGCTCGG................................................... 20 1 1 16.00 16 0 1 0 8 3 4
............................................................................................CGACTAGATTTCATGCTCGTC.................................................. 21 1 1 16.00 16 3 4 1 2 5 1
............................................................................................TGACTAGATTTCCTGCTCGTCC................................................. 22 2 1 16.00 16 16 0 0 0 0 0
...........................................................................................CTGACTAGATTTCATGCTCGTCTA................................................ 24 1 1 16.00 16 6 7 0 1 1 1
............................................................................................TGACTATATTTCATGCTCGTCTA................................................ 23 1 1 16.00 16 13 1 1 0 1 0
............................................................................................AGACTAGATTTCATGCTCGTC.................................................. 21 1 1 16.00 16 3 2 0 8 3 0
............................................................................................TGACTAGCTTTCATGCTCGTCTA................................................ 23 1 1 16.00 16 10 0 0 1 1 4
............................................................................................TGAATAGATTTCATGCTCGTCT................................................. 22 1 1 16.00 16 1 1 1 9 3 1
............................................................................................TGACTAGATTTCATCCTCGT................................................... 20 1 1 16.00 16 2 1 5 3 5 0
..................................................GTGAACATGGATCTAGTGCACG........................................................................................... 22 1 1 16.00 16 13 0 0 3 0 0
............................................................................................TGACTAGATTTCCTGCTCGT................................................... 20 1 1 16.00 16 3 0 0 4 5 4
............................................................................................TGACTAGACTTCATGCTCGTC.................................................. 21 1 1 16.00 16 6 0 1 7 1 1
............................................................................................TTACTAGATTTCATGCTCCTCT................................................. 22 2 2 15.50 31 31 0 0 0 0 0
................................................CGGCGAACATGGATCTAGTGCA............................................................................................. 22 0 1 15.00 15 10 0 1 1 0 3
............................................................................................TGACTAGATTTCATGTTCGTCTA................................................ 23 1 1 15.00 15 9 2 0 2 0 2
............................................................................................TGACTAGATTTCATGCTCGTCTTT............................................... 24 1 1 15.00 15 1 14 0 0 0 0
............................................................................................CTACTAGATTTCATGCTCGTCT................................................. 22 2 1 15.00 15 15 0 0 0 0 0
..................................................GCGAACATGGATCTAGTGCACT........................................................................................... 22 1 1 15.00 15 7 3 1 2 0 2
............................................................................................TGTCTAGATTTCATGCTCGTCT................................................. 22 1 1 15.00 15 1 1 0 8 5 0
............................................................................................TGACTAGATTTCATGCTCTC................................................... 20 2 2 15.00 30 30 0 0 0 0 0
.............................................................................................GACTAGATTTCATGCTCGTCTT................................................ 22 1 1 15.00 15 0 15 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGCCTA................................................ 23 1 1 15.00 15 2 3 0 9 0 1
............................................................................................ATACTAGATTTCATGCTCGTCT................................................. 22 2 1 15.00 15 15 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTTGT................................................... 20 1 1 15.00 15 2 2 3 2 3 3
............................................................................................TTACTAGATTTCATGCTCTTCT................................................. 22 2 1 14.00 14 14 0 0 0 0 0
............................................................................................TGACTAGATTGCATGCTCGT................................................... 20 1 1 14.00 14 0 0 1 8 4 1
............................................................................................TGACTAGATTTCATGCTCGTAA................................................. 22 2 1 14.00 14 1 13 0 0 0 0
............................................................................................TGACCAGATTTCATGCTCGTC.................................................. 21 1 1 14.00 14 2 2 1 4 4 1
.................................................GTAGAACATGGATCTAGTGCAC............................................................................................ 22 2 1 14.00 14 14 0 0 0 0 0
............................................................................................TGACTAGATTTCATGTTCGT................................................... 20 1 1 14.00 14 3 1 5 4 0 1
............................................................................................TGACTAGATTTCATGCTCGTCTATCC............................................. 26 2 1 14.00 14 1 13 0 0 0 0
.................................................GGCGAACATGGATCTAGTGCACGA.......................................................................................... 24 1 1 14.00 14 6 4 2 1 1 0
............................................................................................TCACTAGATTTCATGCTCGTCTA................................................ 23 1 1 14.00 14 8 1 1 1 1 2
............................................................................................TGACTGGATTTCATGCTCGTC.................................................. 21 1 1 14.00 14 4 2 0 6 1 1
............................................................................................TAACTAGATTTCATGCTCGTCC................................................. 22 2 1 14.00 14 14 0 0 0 0 0
............................................................................................TGACTATATTTCATGCTCGT................................................... 20 1 1 14.00 14 3 2 7 0 2 0
............................................................................................TCACTAGATTTCATGCTCGTC.................................................. 21 1 1 14.00 14 13 1 0 0 0 0
.............................................................................................TACTAGATTTCATGCTCGTCT................................................. 21 1 1 13.00 13 6 5 2 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTGT................................................. 22 1 1 13.00 13 8 1 1 2 1 0
............................................................................................TGCCTAGATTTCATGCTCGTCC................................................. 22 2 2 13.00 26 26 0 0 0 0 0
............................................................................................TGACTAGATTCCATGCTCGT................................................... 20 1 1 13.00 13 0 0 6 5 2 0
............................................................................................TGACTAGATTTCATGCTCGTCCA................................................ 23 1 1 13.00 13 4 6 1 1 0 1
............................................................................................TTACTAGATTTCATCCTCGTCT................................................. 22 2 1 13.00 13 13 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCCCGTC.................................................. 21 1 1 13.00 13 2 2 1 6 1 1
............................................................................................TGACTTGATTTCATGCTCGTCT................................................. 22 1 1 13.00 13 8 0 0 2 3 0
............................................................................................TGACTAGATTTCACGCTCGTC.................................................. 21 1 1 13.00 13 1 1 1 7 2 1
............................................................................................TGACTACATTTCATGCTCGTCT................................................. 22 1 1 13.00 13 5 3 1 2 2 0
............................................................................................TTACTAGATTTCATGCTCGTCTT................................................ 23 2 1 13.00 13 13 0 0 0 0 0
............................................................................................TGCTTAGATTTCATGCTCGTCT................................................. 22 2 1 13.00 13 13 0 0 0 0 0
............................................................................................TAACTAGATTTCATGCTCGT................................................... 20 1 1 13.00 13 5 0 2 2 4 0
............................................................................................TGACTAGATTTCATGATCGTC.................................................. 21 1 1 13.00 13 0 0 1 10 2 0
............................................................................................TGACTAGGTTTCATGCTCGTC.................................................. 21 1 1 13.00 13 0 2 0 3 7 1
............................................................................................TGACTAGATTTCATGCTCGTAT................................................. 22 1 1 13.00 13 0 1 2 8 2 0
.................................................GGCTAACATGGATCTAGTGCAC............................................................................................ 22 1 1 13.00 13 13 0 0 0 0 0
............................................................................................TGACTAGATTACATGCTCGTCT................................................. 22 1 1 12.00 12 3 6 0 1 1 1
.................................................GGCGAACATGGGTCTAGTGCACG........................................................................................... 23 1 1 12.00 12 0 9 0 1 0 2
.................................................GGCGAGCATGGATCTAGTGCACG........................................................................................... 23 1 1 12.00 12 3 1 4 2 2 0
............................................................................................TGACTAGATTTCCTGCTCGTCTA................................................ 23 1 1 12.00 12 5 0 0 0 3 4
............................................................................................TGACTAGATTTCATGCGCGTCT................................................. 22 1 1 12.00 12 7 0 0 1 4 0
............................................................................................TTACTAGATTTCATGTTCGTCT................................................. 22 2 1 12.00 12 12 0 0 0 0 0
............................................................................................TGGCTAGATTTCATGCTCGT................................................... 20 1 1 12.00 12 0 1 4 2 5 0
............................................................................................TGACTAGCTTTCATGCTCGTCC................................................. 22 2 1 12.00 12 12 0 0 0 0 0
............................................................................................TGGCTAGATTTCATGCTCGTCTA................................................ 23 1 1 12.00 12 3 2 0 2 1 4
............................................................................................TGACTAGATTTCATGCTCGTCG................................................. 22 1 1 12.00 12 1 4 0 4 3 0
............................................................................................TGACTAGATTTCATGCTCTT................................................... 20 1 1 12.00 12 3 0 0 5 4 0
...........................................................................................ATGACTAGATTTCATGCTCGTCT................................................. 23 1 1 12.00 12 0 11 0 1 0 0
.................................................GGCGAACATGGATCTAGTGCACGG.......................................................................................... 24 0 1 12.00 12 7 1 1 2 1 0
...........................................................................................GTGACTAGATTTCATGCTCGTT.................................................. 22 1 1 12.00 12 2 1 7 1 1 0
............................................................................................TTACTAGATTTCATGCTCT.................................................... 19 2 6 11.83 71 71 0 0 0 0 0
.............................................................................................GACTAGATTTCATGCTCGTCTAA............................................... 23 1 1 11.00 11 0 11 0 0 0 0
............................................................................................TGACTAAATTTCATGCTCGTCT................................................. 22 1 1 11.00 11 8 0 0 1 1 1
............................................................................................TGACTAGATTTCATGTTCGTCC................................................. 22 2 1 11.00 11 11 0 0 0 0 0
............................................................................................TTACTAGATTTCATGCTCGTCTAT............................................... 24 1 1 11.00 11 11 0 0 0 0 0
............................................................................................TGACTAGACTTCATGCTCGTCTA................................................ 23 1 1 11.00 11 5 2 0 2 0 2
.................................................GGCGAACATGGATCTAGTTCACG........................................................................................... 23 1 1 11.00 11 8 0 0 1 0 2
............................................................................................TGAATAGATTTCATGCTCGT................................................... 20 1 1 11.00 11 0 0 3 4 3 1
............................................................................................TGACTCGATTTCATGCTCGTC.................................................. 21 1 1 11.00 11 0 0 0 2 8 1
............................................................................................TGACTAGATTTCATGCTCGTCTATT.............................................. 25 0 1 11.00 11 2 9 0 0 0 0
.................................................GGCGTACATGGATCTAGTGCACG........................................................................................... 23 1 1 11.00 11 9 0 0 0 0 2
............................................................................................TGACTAGATGTCATGCTCGTC.................................................. 21 1 1 11.00 11 0 0 0 8 3 0
.................................................GGCGAACATGGATCTAGTGCACGC.......................................................................................... 24 1 1 11.00 11 8 0 0 1 0 2
............................................................................................TGACTAGATTTTATGCTCGTC.................................................. 21 1 1 11.00 11 3 5 2 1 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTTC............................................... 24 2 1 11.00 11 2 8 0 0 1 0
............................................................................................TGACTAGATTTCATGCTAGTCT................................................. 22 1 1 11.00 11 0 1 0 5 5 0
............................................................................................TGACTAGAGTTCATGCTCGTCT................................................. 22 1 1 11.00 11 0 0 0 6 4 1
............................................................................................TGGCTAGATTTCATGCTCGTC.................................................. 21 1 1 11.00 11 1 3 1 2 4 0
............................................................................................TGACTAGATTTCATGCTCCT................................................... 20 1 1 11.00 11 0 0 3 5 3 0
............................................................................................TTACTAGATTTCATGCTCGAC.................................................. 21 2 1 10.00 10 10 0 0 0 0 0
............................................................................................TGACTAGAGTTCATGCTCGTC.................................................. 21 1 1 10.00 10 0 0 1 6 3 0
..............................................................................................ACTAGATTTCATGCTCGTCC................................................. 20 1 1 10.00 10 9 1 0 0 0 0
.................................................GACGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
............................................................................................GTACTAGATTTCATGCTCGTCT................................................. 22 2 1 10.00 10 10 0 0 0 0 0
............................................................................................TGACTAGATTTTATGCTCGT................................................... 20 1 1 10.00 10 0 5 0 2 1 2
............................................................................................TGACTAGATTTCATGCTCGA................................................... 20 1 1 10.00 10 2 3 1 0 3 1
............................................................................................TGACTAGATTTCATGCTAGT................................................... 20 1 1 10.00 10 0 0 5 3 2 0
.................................................GTCGAACATGGATCTAGTGCACC........................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0
.................................................GGCGAACATGGCTCTAGTGCACG........................................................................................... 23 1 1 10.00 10 1 0 0 0 2 7
............................................................................................TGACTAGATTTCATGCTTGTC.................................................. 21 1 1 10.00 10 3 0 0 3 3 1
............................................................................................TTACTAGATTTCATGCTCGCCT................................................. 22 2 1 10.00 10 10 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAAAAA............................................ 27 2 1 10.00 10 0 10 0 0 0 0
............................................................................................TGCCTAGATTTCATGCTCGT................................................... 20 1 1 10.00 10 7 0 2 0 1 0
...........................................................................................TTGACTAGATTTCATGCTCGTCT................................................. 23 1 1 10.00 10 0 10 0 0 0 0
............................................................................................TGACCAGATTTCATGCTCGT................................................... 20 1 1 10.00 10 0 0 1 4 3 2
..................................................GCGAACATGGATCTCGTGCACG........................................................................................... 22 1 1 10.00 10 2 0 0 2 3 3
............................................................................................TGACTAGATTTCATGCTCGACT................................................. 22 1 1 10.00 10 7 1 0 0 1 1
............................................................................................TGACTAGATTTCATGCTCGTAAA................................................ 23 2 1 10.00 10 0 10 0 0 0 0
................................................CGGCGAACATGGATCTAGTGC.............................................................................................. 21 0 1 10.00 10 5 0 1 0 0 4
............................................................................................TGAATAGATTTCATGCTCGTC.................................................. 21 1 1 9.00 9 0 0 1 5 3 0
..................................................GGGAACATGGATCTAGTGCAC............................................................................................ 21 1 1 9.00 9 9 0 0 0 0 0
............................................................................................TGACTAGACTTCATGCTCGTCC................................................. 22 2 1 9.00 9 9 0 0 0 0 0
............................................................................................TGACTAGATTCCATGCTCGTC.................................................. 21 1 1 9.00 9 0 1 1 5 2 0
............................................................................................TGACTAGATTTCATGCTCGGC.................................................. 21 1 1 9.00 9 3 0 0 4 1 1
............................................................................................TGACTAGTTTTCATGCTCGTCT................................................. 22 1 1 9.00 9 2 1 0 1 5 0
.................................................GGAGAACATGGATCTAGTGCA............................................................................................. 21 1 1 9.00 9 9 0 0 0 0 0
.................................................GGCGAACATGGATCTAGGGCACG........................................................................................... 23 1 1 9.00 9 5 2 0 1 0 1
.............................................................................................GACTAGATTTCATGCTCGTCTCC............................................... 23 2 1 9.00 9 0 9 0 0 0 0
............................................................................................TTACTAGATTTAATGCTCGTCT................................................. 22 2 1 9.00 9 9 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTGCTCT................................................. 22 2 1 9.00 9 9 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTCGA................................................ 23 1 1 9.00 9 3 1 0 2 1 2
............................................................................................TGACTGGATTTCATGCTCGT................................................... 20 1 1 9.00 9 2 0 1 5 1 0
............................................................................................TGACTAGACTTCATGCTCGT................................................... 20 1 1 9.00 9 0 0 4 4 1 0
............................................................................................TGACTAGATTTCATGCTCAT................................................... 20 1 1 9.00 9 0 0 4 2 2 1

Anti-sense strand reads

GACGACGGACTATAAAGAAAAAAAACGAGAAGAGACTGAGATAAAACAGCCGCTTGTACCTAGATCACGTGCCAACAAGTACTAATTCAAGCACTGATCTAAAGTACGAGCAGATAATTCAACCCAGTTATGTGTGTCGCTTTTGTACCGGTTCTCTGGTAAT

***********************************(((((.((((.((.(((((.((((((((((((.(((((................))))))))))).)))))).))))).)).)))).))))).***********************************
Read size # Mismatch Hit Count Total Norm Total M046

female body

.............................................................................AGTACTAATTCAAGCACTGAT................................................................. 21 0 1 1.00 1 1
..........................................................................................................................CCCAGTTATGTGTGTCGCTTT.................... 21 0 1 1.00 1 1
.........................................................................................AGCACTGATCTAAAGTACGAGC.................................................... 22 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:26449253-26449415 + dmo_146 confident CTGCTGCCTGATATTTCTTTT-----------------------------------------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACACAC-------------AGCGAAAA-CATGGCCAAGA---------G-ACCATTA
droVir3 scaffold_12822:2333361-2333559 + dvi-mir-996 Known_mirbase CTGCTGCCTGATTTTTGATTT-------TTTTTTTTTTTTTGTT--TCGCTC----------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACACACACACACACATAAAAGAAAAACATGGCCAAGA---------G-GCCATAA
droGri2 scaffold_14624:3251509-3251704 + dgr_2 confident T-GC-------------TCTCTA-----------TCTCTCTGTCTCTCGCCCACTTTCTAGCTTCAACTGCAACTGCAACTGCTGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAA---------CACAAAAAAAAA----AG--AGGAGAGCAAAG----------
droWil2 scf2_1100000004921:1735978-1736135 + dwi_122 confident G--ATGGATGGAG-TCCTTTCTATGTGG---------CAGCG---------------------------------------T---CTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AAC-AAGAGCGCAGCGGAGA---------G-GGCA---
dp5 2:1883607-1883722 + dps_3 confident CAGCG----------------------------------------------------------------------------TTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACAC-----------------A-------------------------------------
droPer2 scaffold_7:2047020-2047135 + dpe_11 confident CAGCG----------------------------------------------------------------------------TTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACAC-----------------A-------------------------------------
droAna3 scaffold_13340:14198961-14199069 - dan_123 confident G-----------------------------------------------------------------------------------TCT-TTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AC------------------------------------
droBip1 scf7180000395971:964869-964978 + T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AC------------------------------------
droKik1 scf7180000302466:430756-430864 - T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------A-------------------------------------
droFic1 scf7180000453776:339234-339349 + T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
droEle1 scf7180000491280:1230596-1230711 + T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
droRho1 scf7180000779659:58354-58469 - T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
droBia1 scf7180000302136:3095572-3095694 - ATGCG----------------------------------------------------------------------------GAGGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AGCGAAGA------------------------------
droTak1 scf7180000415310:303407-303529 + ATGTG----------------------------------------------------------------------------GATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
droEug1 scf7180000409787:530954-531069 - T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
dm3 chr3R:25042898-25043013 + dme-mir-996 Known_mirbase T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------
droSim2 3r:24401358-24401491 + dsi_99 confident T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------GAGCGCAGCTTTCCATCT
droSec2 scaffold_4:3905691-3905823 + dse_174 confident T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------GAGCGGAGCT-TCCATCT
droYak3 3R:21454426-21454535 - dya_9 confident G---------------------------------------------------------------------------------ATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-------------------------------------------------------
droEre2 scaffold_4820:2987423-2987530 - der_12 confident T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTGCTGCCTGATATTTCTTTT-----------------------------------------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACACAC-------------AGCGAAAA-CATGGCCAAGA---------G-ACCATTASizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22142058.004205816519159337334827135231863
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................21116210.001621063534062025258030561790
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................20114912.001491230121130172222637856000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................23110473.0010473494018725977661855443
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2314285.004285347631881512422646
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2214004.00400460632922041011931246
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2213654.0036542038736142
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................2111213.0012131197000151
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221895.008956289311151426
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191792.007925732644541580
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221646.0064619364756911
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................231509.005093801734391821
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201480.0048031810544112
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201454.0045444610331
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211405.0040511312211921426
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221356.0035635400020
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231284.002841281538434317
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211274.0027412475617925
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................191264.0026420012601
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................241223.00223185600311
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................191215.0021520901302
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................201174.00174413131521
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................241162.00162101802501
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................201131.00131522101030
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................231116.00116259155125
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC.......................................................................241102.001029400071
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21195.009565201621
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATC......................................................................25192.009275001160
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................20188.0088274373116
........................................................................................................................................................TGACTAGATTTCATGCTCC............................................................................19182.00821000810
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................25172.00727110000
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................21169.006957000102
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24167.00676727405
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................23167.0067161843188
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCCC......................................................................25160.00606000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21151.0051130911216
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18150.00504901000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................21144.00444400000
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23143.00432011372
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19143.00432712175
...................................................................................................................................GT-TGTTCATGATTAAGTTCG...............................................................................................20142.0042141101106
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24142.004230200100
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................24141.004121100190
........................................................................................................................................................TGACTAGATTTCATGCTCTA...........................................................................20240.50810000810
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24139.00395712168
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19137.003713032109
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................22136.003615012612
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23136.003613003155
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18134.003411113180
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24133.00336332109
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23133.00332721120
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18131.003110112170
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19129.00291700129
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21127.00276253011
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22126.0026622691
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21126.0026814247
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................23126.00260100250
...........................................................................................................CGGCGAACATGGATCTAGTGCAC.....................................................................................................................23125.00250100240
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTC........................................................................22125.00252500000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACC......................................................................25124.00242200020
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20120.0020401186
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21718.4312910001280
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................20116.0016143800
...........................................................................................................CGGCGAACATGGATCTAGTGCA......................................................................................................................22115.00150301101
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22115.0015320271
........................................................................................................................................................TGACTAGATTTCATGCTCTC...........................................................................20215.00300000300
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................22115.00151500000
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................22114.00141300010
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATCC.....................................................................26114.00141300010
............................................................................................................GGCGAACATGGATCTAGTGCACGA...................................................................................................................24114.0014401162
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................22112.0012403410
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24112.0012101271
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................22112.0012101127
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAA.......................................................................23111.00111100000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT......................................................................25111.0011900020
............................................................................................................GGCGAACATGGATCTAGTGCACGC...................................................................................................................24111.0011020180
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC.......................................................................24111.0011801020
..........................................................................................................................................................ACTAGATTTCATGCTCGTCC.........................................................................20110.0010100090
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................20110.0010313021
...........................................................................................................CGGCGAACATGGATCTAGTGC.......................................................................................................................21110.0010040051
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTCC.......................................................................2319.009900000
droVir3
CTGCTGCCTGATTTTTGATTT-------TTTTTTTTTTTTTGTT--TCGCTC----------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACACACACACACACATAAAAGAAAAACATGGCCAAGA---------G-GCCATAASizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................2211093713.00109371338265412316939230024064875513209653123276256422257090120417140975860157021718495091863927296264464975042751355357917066487494084586418052531222535215272221443536637021269884274827556152917271121122035728231524236630879955912186811992350726839433731713671794851394472796234339131720
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................211351532.0035153281616098389217109201745040634217357812671224540135197250216981098231821031247102473028241128383807263311479113178768176233216904121678713206719753001172520100126695179921113112671263210104011196294921517687193900158714096134171015773201341811534634142
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................231328542.00328542503539118989074926216074032522576186454175232334425069523235235421483611464253771626016676156493703936934883179313290105059818258561811148216009997814312431111101111502333100063048683632079965985931211991067646702108792230120
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................201166069.0016606922588973344444200737388957231522572307101316582496557944432656958536715907715875104167211802632207413351517592161539114564502838072813417226815534040243238204430414026241564482504740833677147665387886939025157131531211534945513312144814319102943
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24122398.0022398001616631115101207214837361237182612538214113078622891165690751597218221090363324461643235120001000000000000000630113198310801001527810121300001
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................23113238.001323811173319220652225302527416386269124299325195105580547388526449100880748743415950949284284517732457543167100000000000000000086013060238811019984221200001
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................22110492.0010492130285153462219256302678911236136748206132120216964919571166239178148282285188219842743526442377155180197000021326438510600015127338186521922021066737191418922144011164237
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2317965.0079651161314611304682004745716810071255332415391311138970338126145334240746225833152345429899101001167959181313166213826011358618149184105143123541862082723431210111116
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................2417538.00753802107440238051441231226225103597713142147753743268835182312046321738882008484633307819010000000000000000085526658438110057664600101
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................2216680.0066801040543929124443032210113028153630174148561443692476863901098224904012537554884236729921000000000000000000020245338321300000011410100
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................2315753.005753325613292966094451102096671858678924321591504674397101482328193573391721947473432525600000000001000000002150136250001914138141200000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................2514278.0042780035050100305001010203006103613447924605026247015637127111220000000000000000000000001168134900110112300000
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................1912777.0027771582235038501622141280832815713196562219994331695610412153134206418102497676000000001011002312211136543510121832214682113768710031529
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2212616.0026163668442253013812444810001218914138203244490443663491891901343072571161919156912500000000000000000001630336310014100600000
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................2111792.001792102013317141123213133119105167516593214115735193164414161718241820190000000000020000001394808231911801391031001153735122145
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................2011649.001649321114700011123112100000010020000000000000002000000000000000010034100000035242419183400000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................2111477.0014770193306131903231006636315710151812443520321318191252031312080000000000000000000021418600079243400000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................2311060.001060192725166231146130232165191212634251142358466293518471926172917147000000000000010000281020121001056482630504000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................241937.0093700325118010300033121103517584610510713441059025975967820000000000000000000000651350012691213171410001
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................181921.009211257701095620200005446241153332417171061537161412101182890100000100100004200231012225122659544652566121221522
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................211784.007842292131616482613156211911645611397178815817227201176275263100010001000000000113264200951143282226482402202
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201761.0076101654014100311000000101011010625812233200130000000000000000000012170000056316200000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................231759.00759072612414472524000421050479263621594112124173842041623944110000000000000000000020025210001599712800000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................221702.0070215372927251925610021533122244153612171278726334312150000000000001100000313805300164583047825510000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC.......................................................................241693.00693415319300000007413346171106414716514256127011110031600000000000000000000002491900020002200000
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................211651.00651214601937417653010111091411107212928911145182432812186542030000000000000000000013420111200035135400000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................241635.006353094215010000079332161510520244135654037781519192211360000000000001000000000112824000121231571000000
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................201602.0060266367222917166302300010031111211330010700005200000000000000000004461110010016000400000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC.......................................................................241497.004970032001230000000251332156730033737872131050000012000000000000000000000046700060002100000
...................................................................................................................................GT-TGTTCATGATTAAGTTCG...............................................................................................201485.004850011111800000000010000005347410010001010000000000000100000011000030001061014543627200000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221434.00434002930215000010000012222031041812571760399654000000000000000000010009200010001000000
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221430.0043061234237123010900041131122122141116820401000011500000133513342410268815055858261871971315269
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................221415.004151713301418242233001421610191821143126384547284215100010000000010000000053215160002915171092200000
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................191399.00399122001522581802010532322833531962310272432023563316000000000000000000001000210003218030003
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................181397.003970180171342313410000911310732452533151117617084766662112000000000000000000000207601033181000000
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................231384.003841285434060220010212310400119691341214151401430000000020100000000721714629257016110105172425
........................................................................................................................................................TGACTAGATTTCATGCT..............................................................................171356.003560000000000000000000000000000000000000000000000000000000011001012612644364900000062242631
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................201327.0032725551349000000115545427431544841217121106122091600000000000000000000193902601500000000111
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................221307.00307261101141030100131102300633108511111122101000000000000000000002500013221512155416111312162236
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................191304.00304122590012001001101010000032001100100000011000000000000000000011100000043642200000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................211301.0030102120871424230011302226903191414784315233765168000000000000000000006491340100303300020
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201267.0026700645571514040004110126219859679166132432184000000000000000110044603201101014300000
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................211264.0026414101111401100001100100024204822200000111000000010000122000010030011201726515241210021
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................181243.00243016015335114140003014105212710778210111022301650000000000000000000100016700035032700000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATA......................................................................251220.0022000110002000000010000100002213431922001005156102000000000000000000000001401500000000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT......................................................................251196.0019600510010000000750207147286161255471207161171000000000000000000000002111300000000200000
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................241195.0019584103228034100001200230251211702250300002300000001000000000011364200011716611111700000
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................201194.001940040252280513000000110622279110220101121001860000000000000000000000001100023346400000
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211177.0017711147811101010001010024022350822131020010730000001000110110005106903100135532100014
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCA.......................................................................241159.001590000108000000000000000010020110010777342220000000000000000000000010100000000000000
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................191151.0015100801641920170001301312111482105120228010248000000000000000000000003000000014400000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATC......................................................................251117.0011700220010000000110110221112312581423100100000000000000000000000000131800000010000000
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................231115.00115022903230100001730231224511811201112200310000000000000000000001304201000000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTA.......................................................................241111.0011100702130000000000000000121145000070223188400000000000000000000000011200000000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG.......................................................................241109.001090013000100000000102000021261343419703961020000000000000000000000006300000001000000
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................181108.0010802120318080100000111020084073100001000071000000000000000000000000100055495700000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA........................................................................241103.00103218110200000001202030010481012521310105310000000000000000000000015300053042000000
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19187.008702103320100000100000100322655421011002000000000000000000000022002107611010050011
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22182.0082115120100000000000001004011001010000002000000000010020000010019000534000001413115
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20174.00740142001001002000000000022231000100000230000000000000000000261300000273362820011
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTT........................................................................24173.00730000110000000010011122205469500121014141000000000000000000000037100012003000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21173.0073001304031201000100001010102154120402112041000000000000000000020300000000100000000
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19172.0072031600002100000101211110202200105020000060000000000000000000110700000020110000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTG..........................................................................21168.006800500026100000160000240022101100100231042000000000000000000000100000001010000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19168.006802280103020000100000050140221030001010040000000000000000000000000000003210100000
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................22161.006100600020000000000000230020050130140001010000000000000000000000002022000000001032
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA......................................................................25161.006100030000000010000000000040611101206106700000000000000000000000039000000000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAG......................................................................25160.006000200000000000100010010033118000020157200000000000000000000000006600001000000000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAT.......................................................................23156.005600500000000000010010000011310110000121000000000000000000000000333100000000000000
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24155.005500201270110000000000002100165400001000020000000010000000000001401300000000000000
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20153.005310100103011010020000010040000000206010020000000000000000000031400100002150000000
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24147.004701101212010000000000110000033010200000012000000000000000000001601400010010100000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24147.00471230303110000010021000003032120000000100000000000010000000110390101000000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTCC......................................................................25145.004500500200000000110010100000006631900000000000000000000000000000000000000000000000
.............................................................................................................................................................AGATTTCATGCTCGTCT.........................................................................17145.0045000000000000000000000000000000000000000000000000000000001000000271401000000020000
droGri2
T-GC-------------TCTCTA-----------TCTCTCTGTCTCTCGCCCACTTTCTAGCTTCAACTGCAACTGCAACTGCTGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAA---------CACAAAAAAAAA----AG--AGGAGAGCAAAG----------SizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................2216297.00629745221775
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2011367.0013672331134
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................211933.00933498435
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................231551.0055148170
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211382.003823820
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................231180.001808694
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................221148.001487672
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................23183.00836617
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24159.0059554
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................19157.00573522
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................20133.0033330
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19130.0030300
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................22130.0030300
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................21118.0018126
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................20117.0017143
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................23114.001495
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................20111.0011101
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24110.001037
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18110.0010100
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................2218.00871
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................2418.00871
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................2118.00880
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................2217.00770
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................2117.00743
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG.......................................................................2417.00770
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................2317.00770
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT......................................................................2516.00660
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................1816.00660
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................2116.00651
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG.......................................................................2415.00550
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2215.00523
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAT.......................................................................2315.00550
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................2315.00541
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................2014.00431
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGGC......................................................................2513.00330
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................2413.00321
...................................................................................................................................GT-TGTTCATGATTAAGTTCG...............................................................................................2013.00303
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................2313.00321
...........................................................................................................CGGCGAACATGGATCTAGTGCAC.....................................................................................................................2313.00312
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................2413.00312
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................1913.00312
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................1912.00220
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................2312.00211
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................2212.00220
...........................................................................................................CGGCGAACATGGATCTAGTGCACT....................................................................................................................2412.00220
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................1912.00220
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................2212.00202
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................2112.00202
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................2112.00220
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................1812.00220
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................2112.00202
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................2012.00211
........................................................................................................................................................TGACTAGATTTCATGCTCGTCACA.......................................................................2411.00110
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................2311.00110
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................2211.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAAC.....................................................................2611.00110
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTTAG......................................................................2411.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC.......................................................................2411.00110
.............................................................................................................................................................AGATTTCATGCTCGTCTT........................................................................1811.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATGG.....................................................................2611.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCA.......................................................................2411.00110
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................1911.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................2011.00101
............................................................................................................................................................TAGATTTCATGCTCGTCTAT.......................................................................2011.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC.......................................................................2411.00110
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................1911.00110
..............................................................................................................CGAACATGGATCTAGTGCA......................................................................................................................1911.00110
...........................................................................................................CGGCGAACATGGATCTAGTGCA......................................................................................................................2211.00101
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................1911.00110
...........................................................................................................................................................CTAGATTTCATGCTCGTCTT........................................................................2011.00110
............................................................................................................GGCGAACATGGATCTAGTGCAT.....................................................................................................................2211.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................2011.00101
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................1811.00110
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................1811.00110
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................2311.00101
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTCC.......................................................................2311.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATTT.....................................................................2611.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................2411.00110
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................2211.00110
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGC.......................................................................2411.00110
..............................................................................................................CGAACATGGATCTAGTGCACT....................................................................................................................2111.00110
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................2311.00101
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................2211.00110
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................2111.00110
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTCAA......................................................................2420.50110
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21160.06101
droWil2
G--ATGGATGGAG-TCCTTTCTATGTGG---------CAGCG---------------------------------------T---CTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AAC-AAGAGCGCAGCGGAGA---------G-GGCA---SizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................20127442.0027442113571344216170985482
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22125045.00250452267833862684565358
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................23110712.001071298269110461441675
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2117479.0074792307184532919181080
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2314568.0045687705272272389655
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2213713.0037138366234731308473
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................201901.009018982010
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211615.006150602184
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221344.003440112221515
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191324.0032470160262840
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................201319.003193001468
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................221272.002722261811215
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201243.002431011110967
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221192.001920187041
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231180.0018028013859
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221163.0016344311816
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211148.00148316810912
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201133.001333129010
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211125.0012521595355
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................231116.00116206911214
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................231103.00103311313523
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................181100.001007912081
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19199.0099289224
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24195.00950590351
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................21185.00853638092
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22178.00785840133
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24166.00662791236
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20160.00603514110
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................20154.00541209186
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24153.00530350144
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................23147.00475162213
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21140.00401201342
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19138.0038224345
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................22136.0036341010
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20135.0035877121
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24135.00350116153
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19130.0030820119
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................22130.0030174063
...................................................................................................................................GTTTGTTCATGATTAAGTTCG...............................................................................................21129.0029710192
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19129.00290611210
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23128.00281112050
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23126.0026164141
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23122.002259440
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC.......................................................................24121.0021021000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21121.0021220125
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................25119.0019018010
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21119.001939034
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24119.001918172
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21118.001880136
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18117.0017211103
.............................................................................................................GCGAACATGGATCTAGTGCACGGT..................................................................................................................24115.001513290
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18115.0015015000
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22115.001584030
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................18114.001449010
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................20113.001332242
...........................................................................................................CGGCGAACATGGATCTAGTGCA......................................................................................................................22113.0013110101
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................23111.001141132
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24111.001115041
..............................................................................................................CGAACATGGATCTAGTGCACGGT..................................................................................................................2319.00911052
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................1818.00817000
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................2018.00832102
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................1918.00801034
............................................................................................................GGCGAACATGGATCTAGTGCACGA...................................................................................................................2418.00802150
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA......................................................................2518.00808000
.............................................................................................................GCGAACATGGATCTAGTGCACC....................................................................................................................2218.00850030
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................2317.00721211
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.........................................................................2316.00660000
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................1916.00602301
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCCC......................................................................2516.00615000
........................................................................................................................................................TGACTAGATTTCATGCTCTA...........................................................................2016.00600042
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................2216.00601041
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAT.......................................................................2315.00505000
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................2315.00512020
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................2115.00505000
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................1915.00503200
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................1915.00503200
................................................................................................................AACATGGATCTAGTGCACG....................................................................................................................1915.00530110
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................2215.00505000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTC........................................................................2415.00550000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTC........................................................................2215.00505000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAA.......................................................................2315.00505000
............................................................................................................GGCGAACATGGATCTAGTGCACGGT..................................................................................................................2514.00401201
........................................................................................................................................................TGACTAGATTTCATGCTCGTCCC........................................................................2314.00404000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA........................................................................2414.00412010
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................2014.00404000
.............................................................................................................GCGAACATGGATCTAGTGCACGGTT.................................................................................................................2514.00401021
...........................................................................................................CGGCGAACATGGATCTAGTGCAC.....................................................................................................................2314.00400130
............................................................................................................GGCGAACATGGATCTAGT.........................................................................................................................1814.00400040
dp5
CAGCG----------------------------------------------------------------------------TTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACAC-----------------A-------------------------------------SizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22124998.00249984413800907239165861201262287572109
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................21110004.001000470648039111643513059267317335
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2018942.00894217343806641787848259132204
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................2317330.00733004430135181471873229796827
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2313038.0030381416823122051790391525
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2212967.002967251722182154131134762118
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................2111045.0010450103610131021
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................2111008.001008128046041193032181
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221544.0054404618242848110
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191521.005212389353157164140
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201495.00495049300020000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231446.004460307641381131192
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................221380.0038031727278082000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221378.00378037610010000
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................191372.00372136900100100
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221330.003303192821121213015
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................201316.0031632435382230020
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211250.00250015523344619000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................241114.001140841011120501
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................211112.00112010820200000
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20196.00960521312410113
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19195.009508821120001
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................20195.009508440115000
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23190.009007540115040
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................23190.009025191716247
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21187.00871490012511000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24171.007105010452540
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................20160.006006000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23155.005513440753010
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................20147.0047512013224000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................23144.0044022301441000
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................19142.004203501024000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21136.003603400101000
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................18135.003503310010000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................21131.003103100000000
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24130.003001730207100
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................25129.002902700000101
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................22128.002801110303073
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22128.002802110240000
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18127.002702700000000
...................................................................................................................................GT-TGTTCATGATTAAGTTCG...............................................................................................20127.002702110410000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................22126.002602600000000
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18125.002501900100302
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19122.002201800010201
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24119.00190630203032
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21117.00170800350010
.............................................................................................................GCGAACATGGATCTAGTGTT......................................................................................................................20117.001701000007000
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18117.00173411430100
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19117.001701500020000
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................23117.001701520000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23116.001601310200000
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................19115.001501200010002
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21114.00140700223000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24114.001401110200000
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23114.00140940100000
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................18113.001301300000000
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20112.00120910101000
..............................................................................................................CGAACATGGATCTAGTGCA......................................................................................................................19111.001101100000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................24110.00100510310000
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................20110.00105100121000
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................2019.0090800001000
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................2319.0090230202000
.............................................................................................................................................................AGATTTCATGCTCGTCT.........................................................................1718.0080000000440
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................2218.0080110330000
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................2418.0080700010000
..............................................................................................................CGAACATGGATCTAGTGCACGT...................................................................................................................2218.0080800000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT......................................................................2517.0070700000000
............................................................................................................GGCGAACATGGATCTAGTGCACGA...................................................................................................................2417.0071410100000
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................2217.0070610000000
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................2417.0070320101000
.............................................................................................................GCGAACATGGATCTAGTGCACC....................................................................................................................2217.0070140101000
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................2216.0060500100000
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................1816.0060600000000
.............................................................................................................GCGAACATGGATCTAGTGCACGC...................................................................................................................2316.0060410001000
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................2016.0060410001000
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................2316.0060040200000
..............................................................................................................CGAACATGGATCTAGTGC.......................................................................................................................1816.0060600000000
............................................................................................................GGCGAACATGGATCTAGTGCACGGT-.................................................................................................................2516.0060600000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-T................................................................................................................2515.0050300000011
.............................................................................................................GCGAACATGGATCTAGTGCACA....................................................................................................................2215.0050500000000
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................1815.0050500000000
........................................................................................................................................................TGACTAGATTTCATGCTTT............................................................................1925.00100701020000
...............................................................................................................GAACATGGATCTAGTGCAC.....................................................................................................................1915.0050500000000
............................................................................................................GGCGAACATGGATCTAGT.........................................................................................................................1814.0040400000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCAC........................................................................2314.0040400000000
............................................................................................................GGCGAACATGGATCTAGTGCACGC...................................................................................................................2414.0040210100000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG.......................................................................2414.0040400000000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTC........................................................................2214.0040400000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC.......................................................................2414.0040220000000
...............................................................................................................GAACATGGATCTAGTGCA......................................................................................................................1814.0040400000000
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................1914.0040400000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCCT........................................................................2314.0040000010030
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC.......................................................................2413.0030210000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTT........................................................................2113.0030300000000
.............................................................................................................GCGAACATGGATCTAGTGCAT.....................................................................................................................2113.0030300000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTTA.......................................................................2413.0030100000020
droPer2
CAGCG----------------------------------------------------------------------------TTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACAC-----------------A-------------------------------------SizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22115748.0015748341402562539276110720
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2017006.007006157188845570315781811
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2115831.005831340166521810792119410
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................2312844.00284442981327598778118
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2311399.00139921415212956220628
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2211291.0012912691719967218467
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211298.0029832910121
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221280.00280020461663
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................181272.0027226045210
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211263.00263181055277236
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231219.002191715577312
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191209.0020987112465022
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................201180.00180167010120
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................201123.001233184114245
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201109.0010901070110
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................22175.00751617621618
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................21174.0074311332034
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19172.00720690012
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................22168.00680680000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................20164.0064142852312
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................20153.005340012100
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21151.005105115219
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................22134.003410804120
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................22132.00321060682
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23131.003101034140
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................23126.00262121128
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24125.00250220210
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................23125.00251256020
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22120.0020920261
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21118.0018021582
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................21118.0018791010
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20117.00171320002
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19116.0016770020
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20116.0016054214
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................19115.00150200211
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24114.0014054311
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19113.0013530113
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23113.0013060214
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................21112.00120120000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21111.0011071012
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21110.0010210313
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................2319.009331110
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................2019.009080010
.............................................................................................................GCGAACATGGATCTAGTGTT......................................................................................................................2017.007000016
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................2216.006210012
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................1916.006140010
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................2315.005030011
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................2415.005010202
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................1815.005011030
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................2415.005230000
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................1814.004400000
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................1814.004040000
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................2214.004040000
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................2014.004120010
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................2014.004020011
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................1914.004030001
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................2314.004100021
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAA.......................................................................2314.004040000
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................1914.004030001
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................2414.004001021
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................1814.004011011
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................1814.004210010
.............................................................................................................GCGAACATGGATCTAGTGCACC....................................................................................................................2213.003000120
.............................................................................................................................................................AGATTTCATGCTCGTCTT........................................................................1813.003020010
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................2213.003001011
........................................................................................................................................................TGACTAGATTTCATGCTCGCA..........................................................................2113.003000120
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG.......................................................................2413.003030000
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................2313.003010020
.................................................................................................................ACATGGATCTAGTGCACG....................................................................................................................1813.003001020
..............................................................................................................CGAACATGGATCTAGTGCACT....................................................................................................................2113.003300000
droAna3
G-----------------------------------------------------------------------------------TCT-TTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AC------------------------------------SizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................20127015.0027015265068714072047118418383
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22126395.00263956750195910311054721943914
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................21110648.001064832612400737156214691219
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................2315080.00508018851163057132941767
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2312985.002985715118251224851520
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................2011404.001404731451116124
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2211299.001299341462580410397
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................1911032.00103244711416833171
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................221624.006241057981827
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221506.0050615687239987
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211503.0050348491531
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231447.004471513611136140
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201243.0024323710005
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................191192.0019218110154
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................201191.001912141522912
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................211166.00166111111511
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221161.001616244141040
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221138.0013813800000
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211129.001293412351857
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................211100.001002031204313
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................21198.009833461396
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24180.008041412536
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19154.005435501121
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................20149.004915102274
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19148.00484300140
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21147.004730442511
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20146.004611620126
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24145.0045121111605
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................22145.004519012113
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTT........................................................................21142.004226000142
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................21141.00413900110
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24138.00383212327
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18138.00383800000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23131.003111121403
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19126.00267121015
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19124.0024620646
...................................................................................................................................GT-GTTTCATGATTAAGTTCG...............................................................................................20123.0023264047
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23122.00221202215
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24121.00211700202
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23120.00200011117
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23120.00201120052
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................18119.00191600030
........................................................................................................................................................TGACTAGATTTCATGCTCGTG..........................................................................21119.00192021131
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................24117.00171311200
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18116.0016920131
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................20115.0015222225
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18115.0015421701
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................20114.0014115502
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................20113.00131100020
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20112.0012700140
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................22111.00111100000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22110.0010320005
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................21110.00101000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTAT.......................................................................22110.0010500050
..........................................................................................................................................................ACTAGATTTCATGCTCGTCC.........................................................................20110.00100100000
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................2219.009100107
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................1818.008300005
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................2318.008300122
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................2418.008322001
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................2318.008701000
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................1917.007400003
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................2117.007420001
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................2516.006321000
...........................................................................................................CGGCGAACATGGATCTAGTGCA......................................................................................................................2216.006400002
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................2216.006510000
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................1816.006411000
droBip1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AC------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------A-------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATGCG----------------------------------------------------------------------------GAGGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AGCGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATGTG----------------------------------------------------------------------------GATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................2212725839.0027258390000297871403201191586211299442221506290101296768863510133461717117488683210843424573410584912157548006202224440438304666181274585216755611601353425649090692754206426488082115000000000000000008501486043687755830444273049462372166527557812448842835920849013639461479196624471881741905374576403331705522775512832143353076543510918170562232493866522321111461124920800919871609824123312679793349021016514749152872897784820072283973265129242310342453175241177616677112901916193915123338735931364243473515376440390364336174907122796886545919204809337338515684599189771231727218587308696164557630570377879525401782000000412232239095816144291662150501260065241107849090915171352696855566282571206389624625390116436576981646030100431845052401187812424946309931796529174617747441258300786086111515746186617448177377603129221091413401106465171245931903024111237597113205529985139908044320767110800137279393011226814111117452624730176816406274833092767332720905008157920753215121829224595584920880018781119010111543218715477221191023288418108166037352644676462245853485456060013201088373522581682716128382804185694406103606931110222744
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2111157491.0011574910000913693945722101810334179132342011209241188103437202632221952835330231290161516331235123026531553685744519136766816122348509153281888713626376015081790000000000000000031052304702511718851196121255955689414775447146067402232684324510076585112925204520205710314416188523196257621756138117214752511020471344354825101109393412883742236515101933420382813016305548014801210024563229348041144448282930731029188042491428693104586518423421113393003161679516450521545574051955524790839238919096146522906527119163140625415912101102501380751100448200000179340715971664010014613139098043121951728041879030112978265731614930168498213549924132267216236489610072383818204967095500107115691347465689279420962157733471052948262199269472160338412586861237516254360129619636641044309573506854723197410485571327416503234510328961192364159637394490175714091432175622289185535251486663807416996393970941094566510481368130414271131088567945164501714112691079673201152802542208127922087712907118412992663118113077649883921116271113148252
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2011148241.00114824100001115125103304072313003492374804339019784579293642741014601645554151357229413259910772733503333042977851074130443930025723172131347156000000000000000001009106984467248117441771681386092221042156132386981309115316348718142716453896944248264283371341978414176267057062701136141292701701123754301522524147391144949919162411721048826947971730177464079312454132101170472935600715339480427944088640211165216324333998334933297968718075414903051097782669994761642650032645861572622662564714422764550187602409417168406756491209346712202641103023331785190678442111269212627070000161177721608186692251319239611251134326542690130071787662223442805114616334306148221636736792177076726340125052283769257943822195303016482600231140390325928174812160147341261410251127769966044347653971052929113614401199663531972707545628914937288097363396378815991703173246293989027452733844051354032708185249481328053501141511158031430298003396961075928636136435383951028547860475311312
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................231797971.0079797111001176393258264206911939633016610154002809227710401285543002528216107702511231652712399221632767294967987020656324095174548403921114767290461615110490195168185000000000000000001251212608985582621756001107981374998232470373049504475309675945822211240233218792072411834362235392768564170003347811151303234776541813234210611921249419467131503361403653677940002025042564410801943183726127495414191107487810985647294487134724384183236162663828244589133545231016641909014471251539838266413113784616432364834431229636749043753653517861999111464215201681106202100006459053031711581567192718051033277692416923456754517825024761864262462212263849134478293866291900148214371301262409885154510473347517518818520544458113675170811113663087119630892106149626527883553438372895435181544922707443825836526827707452131327505536978126084512074411249370526395584764942811303881399582199531704300132227671692972127499874763913274125995197597521588401745783158017039819881827024578653241524561542206925712161560
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................231266747.00266747000073320381671812250003500579673605701227292424001731724765104461955411032557208126517639014156761508111480000000000000000010812210011993551561216111770602363125464491953128205162104111118623723811149020733385142824230128721933410310832360070594622922732001143201022287929310257446505588451273475486433209000005621553307002323545743047251215373527327111066680774189915885623369249236177265322422349100003092032564852929482817122790391422050799626710591074116338294941941422163082317000024119945187293294403155672287232532581621230236311392572023250925653645280187465588188211352702232318215821048617501032915009499154692972895698941625110239032236842433981381258260246517812555766136364022681046649537912011184476346234478126582714333760782982244819164378644946273423953206279475334326582359322629102219029150
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................221211289.00211289000017112127778410232311083787352511794320179418259111220108176839714975267441123271271835215130943219310515879504488095000000000000000007181508014329876496681112673139424236482711412211115515102182864281349210041960100126446937801585411416131164754110136212279926211741174161415827230724410634269460678257573953840136625230001402874174441081433641670202415228141274952810037414605822814048211722285245189220494563426742612431534816011313075041377816545251429402608153113221846595184511233428321175133949768884892511029757200000208247942401403762491653055729116714018249722205222282721175296668898477207108574714211786922874875155239535773715788513551734599937405192468391452699100314822383130238731922403268434043912438539442753805071198516455091657145961526130231392072115116521126726012872234442819265171178616317751105154350621548103298491714
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................21135756.00357560000220031011150000002479018324700000217690531293365096169120620331770000000000000000020021614221413911628710505101843712231122288124523228541149181620884122417184571622400300050203800000010401012311191271316420223390002114228753887648111906651996711314551642286243154710716670507000000871100002019120459715271114491933344731184124834421360200101512155142201152413111431751219347326267273113361752352488338263827228145875061951229115655207115545327241223134113214472616115549184686762677140331125913354562101551053687277381132301533110137901759535313730415642411061630
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24123765.002376500009628581612162310000002615210009000000010821321220272974720519118795126000000000000000000000002447261520601642510423944172746603717181348261045116147471084477178111032125026875412398644462023211349509000020003012300000000002919262036213347272913210301400000606179182101300151405122019003030522347312201303240000039270000007542501531714927410810711355722663500381460043233139626634012217552343616714132151130135922718961589106816985050701118201143585911012101012221611211100103500333821810661637
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................19120482.00204820000000000000010050081816407126355311913886881358283722347816283743000764000000000000000002702752891338299262625110441351175152014251223469741652405332023370381563125035001002302863619411311532055621621410994323222425516924420010296150174250256139401160212319216317374211211213662593725428391920024018250111701670044003784172904264435660268651358893451872641213448020021173562414310301317592123712416118451532101331720130543092466151150133126465622878336562873023822831727273551039612318431425549111127277325464617357575813485579148191163239164893718904113502147487855705992368203628118
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................22116070.00160700000111101021500010059330613130230104621415303331479520150202360000000000000000015018011618004167039859199230241644730223915011922044047172418103152002000010102133000004012055121091341111101515168107202117162141617717082123023926141604411614910637301056023002231203100023015072402675154451171151805411271383272632100009112111215224330384884497188512201715119162318125331218380145983217127715110591761162145142129383412141970310710546832638148840371012480529311682666647175235602262998101222292493151231761780490
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24115399.0015399000074610751401600010071127000500000002424103176602815379213751886400037574100000000000000000217922371702153514204661076191188475158238401006445323642104640940892135173591336411847760113020010080105000002007012241751411354230361591417150000049744016260220093741901702200072032131314000432000000332600000066522045014195856711368147312151200841007207210104209636629481026217476833132516387174211132532655546161412110010153931426003495150000312240012010352741315130
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................23113837.0013837000002182407265001002725571016300000000254026473866213123142015325013511931130170000000000000000000006907545974895251018892010611515141281000313481054102193111283042121819051120012203013419001000013040376042466108126106701281439232500000511369692419911201180085301261105318590712134026612283432200170223130000066760130004761262863186714426334063352713623800290000101549383444372364233031027992313254679940403629392962126168118291185733259894184928839290523627145850503950410871561141642123174341023781813618188715515212034293165639727281916016494087125
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22112701.001270100002151000001000000694001431000000026551614301838983584648175470114531904401110000000000000000007073576011951051138133152143721051017061912384981825608918301000108249000000100021344027262810459934293568078410020034012264520130100137010791400224731252052131900013013130000029340000001361267421915135966922217088312962489413700001210219956421793113113171032472162746276645422812155562271022096381017528460011886790622174754218261559282427684021284546422910156653416716127316348105920143013044113294724111125101399119133431183
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................21112636.0012636000021000211024000001296702425130000001021745515246214103152527167900923131000000000000000001071118411432129121640723612526941566383123283876373184277471636611822212060010154171370323501303518176232332343632282818292100110478911214024169017634619114215532194270122814141619131420106050120107260110008063226910252331367411118621411985161372814610000111247232127144948311332133072150121383992108401040329767116098016610251288497614146291515262836241083838744657235151341110124822162282241813172015171111535184102714191471882403018290
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................2019937.009937000010100100000201000214012501513011161811210950431102441510773000000000000000003351314700024024181020015100093909211414022380010801119030100001101001000000101624313351191161134104250172802942141902510471172208291893395410261130000110300000003000414282170111321141481926188121291491378600001077410213915739134172425334039351082710433281145245421261472562652824414413110323125391255101431154642126320840804681267144213111813969522123194467747676544143770
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................2219434.0094340000000000001101800051210124010000041410779318281133238121523104156401932000000000000000001112131405098972102201355111510260231455315722132603101000100000302131002701892412104619461022544141181181441190312411208230430143116163308024235528170012727201032726000000668749109652852197556111822560110771151058968000010919310813232343832487303523114516167225316432619343917056246453062822938343214451611111783681715473151158551849195101911673462271434180111687410634818921210829371272140544668810525438792
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................2319048.0090481000100001000100470046500121202410092251413118208310192119248600010733230000000000000000017171014171133442222212819231391051528249679822145379257032000005020400010010020064136932203614274018168001007012315121402341415256012032005116102110061400000026230000005180216743134124778981473108719311723945511380000710113311108739601142128271518122214197419243446102214281873014448212281934436178332320121166962323718592425021611222618373324838124049591115770127259197115822030944842301832300423850820
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................2218930.008930000096817690311300000022121700134000000031720563029360381217324172353561822000000000000000000000003212712181992821829285219214116002940014625884177121751033013420161000300114112110003000020149153166384268519658481671731600000135131810123470260032150230311356012135114610628260032063600000478400400014201598513866201431361915698180027411100862511371015137225463020112041326838435271894204565284133804909057964642272421931675911714313214158912422281101181466455476332536921814137825581642101711637
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................2017351.0073510000001000010410010035420108112256121336331016155004035747000429160000000000000000025301934073519138344621473113220222011111421412453834336745631192301300011001114000100000025200710102210410102190010082714315301181290661072661932861411511717131694252200201000000230021001571165922331011181419243919832501716530000772514522137053273281231843796815862586949749271713648304422104126682134185318713251515693145220731132115559126878511511017361311331310313229105501215938122851115400
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................2117251.00725100003144110121540000089611320038326900000000010316045261425034832581663712000000000000000000000504127431425916723962123002116302494158114182414810006200400105011913130001000000791500645337116200000261332942513070045130805022122701869179000218800000010200010211510581855828751153002010002603202642701101219131114315313741001039172713163690578628110155256223132073791012193088362974931071021410018102120621138411102359214
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................2316827.0068270000101011010200000031800090102314000181933721101859206191712304249301000000000000000000000000106127791380912713454043012667406192902931683097014230010301040009161000000020001112190584528362846281824100010070084950330260023160251381158100002201001811123000601170000091500000031101119210944048214273561518352820420000103028165243401022633464325234128659152719571629296261729100221612353564420237277231803023194297149291218128162531701754952784596799558536201451631402927081814428141263657482689
...................................................................................................................................GT-GGTTCATGATTAAGTTCG...............................................................................................2016727.00672700000001010000000000144001008000001366642914295231021610131518152001100000000000000000593701177113140100110000253071015110101002000000000021620000000001281352046030431615503820290020023001400121001200114513101019460512110563504000200000037007000402983575693316175016123463323132000091236018582277111118357932549517112716426115557817233262135164248125812265420537645112615105525106416662288105131535127533272997827452518199963135764471563217195261191163718220
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................2115858.005858000000000000000000000010093912000000695313101060813410142382150030000000000000000000612401000001000100001000000102010000000132010102010310000000002521223010624121372425201712010009003500740501000321204036158857126620060700000049030200104734131253201915123933111023420100000111433011825371038111322378987852112149838418301053362533227244822195893045191614172434145828428733610522781513501177517816045229132232910610093496247225173633271775614732830
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2215415.0054150000315613071810000019151800067000000004151119833460229652240617170100000000000000000000067827857615155521350138114441161062556211736812219151207000010206113400100000001320291114144624045455141112000001018231888708112810301931820342011172536951101100120000028320000002820152061612295312511984195005000071046314381323115111318131192712222028159433447287331328324613412033014218172911113431368590143159962510440131514691514130752359990183013341792712221
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................2114883.004883000001000000000000004315042120000022122164825601945913106000156000000000000000000140002401273481273016440031130162014141050050500210002000100001000032003136903171624192191182011314339450100073021221312412233835623223411110010115100308100000001039660299312236224216766362247191092200007414115147332055029176343533335207620463931124155411234613927162161006418178319992196407113953910831103101251144652181248928325229313915567583981319914101313148252717220
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................2314821.0048210000100301011100000095904070000000110177151327019542781623619811214700000000000000000000000816747632172345310300542321932002441451813689711201609700000000200107290001120310101634894534882550266163143000001015100171601700820207221316410023108550002120000008250000002019158221352101951349100050100795821362983543453231810123141010158751313263263611142331414115224101883130712110613013127955505103420431833215110023401000003105025766
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................2014626.0046260000000000000100000000200040000000070001020302010000138120000000000000000000002103000000101000000000000001111521000001300000000001020002000002001233301121201000000476207135010000000182125051315514170010000000100000000000003521251112070111906600250000103187579031166211258231539738381035051217413152211054962718256935624222341646354771521982065221710331060621516010332860615328801174130016122650560
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................2014552.004552000000000000000000001420011700000002110011131121021093100000000000000000000000111948000100221000000000010001513221000001000000000000000000000010040007197541134020000010037301439522105000304032500231983406150210050260000002200100522815114764283222410000000371821020011100034100271122101321084331246334116710317912137432023810228723305182565613817330252063481205235123582311330
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................2413862.00386200001118541416000000101000000000000111130923103102914210000000000000000000000040040529625017433553931116213115522932501931416322177263493944128112023132822020000000010110000102100000003366421061000000120005330200430102110000001212110000010000001100000003022331130432672513517571100353001100050022102020300020120203220052192403050020100000000002505020022200000000001100100111200110
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................2113437.003437000010000100010000005710012600000000152120131510551682315000000000000000000000005165525815098562000200000011631615188143500106901500002000150118000051109038103111314131610672200000265103131480670370034161130742128101233552121571100000180000074000000261618343314157048534398483015530050000336003413101025813041713585014106652611482981751642758471401210110010311554150420106018734214022242000012031443793
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................2113318.0033180000401402121101001001240001310000000143026320390322150454951180000000000000000000000182812221833732128200190083500321311194860276301004601220004100170822003300000036300663576020200000282226922220400201055111126117007251401352821000203900000750000006883331319867123697514500900004177640276518124151503513177752053229185213272016838176184673753334312189162430146147166672015921467615320327145341181061035172921663651
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................1812666.002666000000000000000020001813000001142111000001100010211720200005330000000000000000050614344000000410000002100200001651201000016032000100031021016427890000080210147533500100002012015260704013182211534224017814030924010003003000024600000070614149132032210014100000011322001000016411127110402238121452510093210775721665168119113731520200102086510101000000100000000035000
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................2012525.002525000000001000010000000200001500000001202030015000502441215000000000000000000000000220000010200100000000000510601100000202100000200010001100000032357114115322200000184350647240000010111000094663151321000201100000010011004248287824232510020000000021227252827400411101719426113536038538431051512071604723654516272016223313133731449372018651412101155106794926722281212295515101291048491908610
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................2212194.00219400001010010003000000000000600000000112302061000032240000221000000000000000009267140901131145210020000730012501723115452918000016109000000007197000000001001100142652034400000101324029400160026210902704200142306410000000100000006200000021473112114434145670001000001011200200201130003801101025300173115842331481715000200000000005915020017132223111011012000001012110016
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................2211947.0019470000000000000000000011100090000000014300107302543111671000000000000000000000008371100010000100100001000001031540200000003000000102001000000000013311001165421213116000000701200220430020000000007170327107000022000000300000031411114021409281787720150000010133216031200111612306315113314619416136181322515124140285713432434164519852459137216334463677099261463981143067626514489
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................2411832.001832000000000000001000000000000000000002210101110020011000000000000000000000000011130000207500410121200123011294710200010300100000000202000001000001110439365545000000090047015000000010023160767012012500002000000420000009274972512212122151812000021000510404303071206171144200231311091643215525191053386429741592261225392317653645311123233522162429221012963241422146883219691412680
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................1911793.0017930000000000000001010010000500100410032002230222102200000013730000000000000000081761001000042002110012000200892981400001001100000000010003500000020337034043532300130140515859100000620119110102165160000300000100202100001000221593105311681116897513018280000001242750723926231160178062065385253104037905143621032121142919112030411090810183486210121237222111019083421201243524150
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................2011690.0016900000000100000000000001000017000750030020112400000242100002000000000000000000018241322030010610000000000001002822441900000010000000000011265000101010005200144223022000000106417001430011001609081207078950511001001000000000100200041271586306348292810259311530009000000100100210000003010110101400181532257171503263388202750011012100010290201002215231121101101000012011147062
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................2211546.001546000030433000120000000120004000000001411012131011295101250000000000000000000000028533844113000004221000000100013011282250200001101000000001010000300000075801141016111611631530000015167211986104002200050269304148030811500003051000002100000005121375810103100510020000610205015212212024116115741827837333323031213311191810673121161253200073916735163710661600000211200100301302000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................2111540.00154000000000000021000000040000700000000000100111000000002000000000000000000000001330000001142103001100211200166351010000120000000000000000000000500000001454100100000098851801101000000001003304607240200000000000043000000504920510400211013000000006402020010110004000060030001301052102697541132740454204042216331157010100532540040000324200101501961120
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................2411457.00145700100000200010000000100000000000000310000630001001120000362000000000000000003413010412030101012712000100381600002000000000000300000000030000121000482112131000000003003001100000100010000002003013500023000000240000001370640125010149431617166341429000052110522322234041235381122404561012321541643454417391115235191372201824740131452633523513102322810323229162123982583207811140
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................2311393.001393000001021402002000002100002000000032212261050033141143101200000000000000000000010091856116078265120224021002440204937101213222042603000000001011000101005035190547212132000000110021027150100063010223004010188110100001200000088100000101572116180737341920030000110506441121323004100703037245891756178296283364022113011000121817250202727323111023110002001102012220
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................2511310.00131000001220010000000000104000000000001102110870040206601000000000000000000000001141008385055221848119402010441400039304565139203018515154400000010001000000000000003205046431006100000200000010000400103040000004220100000000000066000000000144201411913231313190005000000000100000000001000200001000000500602222100000000000000002200000010111000000000000000100000000
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................1911279.0012790000000000000000000057040041000000000002043010303524000000000000000000000000107670500200100000000000110013018002000010010010000001030000000020195001192112198223000000191061211642010100030000090142304112010000501000000510000000351684267255750002001100000003230001001000012000030120106353494552116364556536131141001012402717041201119522102100000301421303510015
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................2311163.001163000000000000000000000000000000000000221011400140213210000000000000000000000023151400112000300022100000081118190202101000000010001000000000000001300481247621720000050113114901111202037200800024452200113000000730000002241263730213112163641900000100221040210002100422431013312803053411371228532353054435790471829102922726185274026287441220102673555654172247440
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................1811092.00109200000000000000000000913120010000000001100042001022102100000000000000000000000192014141300103000000000000000066163030030010000000000100000000000006730113181113182010030000014300220512020000000101000165801715010004000000006700000076328564837430010000000010000022000000001100100000001000362395116856212151222153050002133500418021302215441014000213100000310611020
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................1911085.001085000000000000000000000000001211035010001000000000022112000101000000000000000002110000010000000000100000001583010000001004000100001230044000021011001220120000000006221034292554000115041401500411182184000100000030000000000000251829111025354537010300001000050001000233320020000111302105047141642101014811032340301640202091164955872802034140315323161318380532
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................2011067.0010670000001010000200000010000050000000600001011000100040000000000000000000000000011120000001100100000000000122000000001001000000000000006000000010024240160000000003397102200001100111220101202012100010200000000000000767003111061211000020000000081131304335200031112301517253071159431414015520100141811711420102121713912341443412264211122221923143140333124334130
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................1911000.0010000000000000000000000000100000100000141000010111100100000005100000000000000000056331000013400000000000000051039200500000000000000000000000000000000000002000000100050200302000700100011102050200220001000010000000000000000312011010001010110106720000001317111100300331401051011493052453920632519141373156119930140000230153003300447411570431434221413102003383170
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................241923.00923000000010000000001000020000000000000300002100021204110000100000000000000000000000150100100000021120000605500100030000000000010000000000000000000021053515030000040756000000000020000005750011120000120000002200000010103915212045512117001800001000000000040007111152721011110201213331744936230183122320092003161872413011146151222411162710835181811036111022163610
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATC......................................................................251915.009150000000000000000000000000000000000000000000000000010000000000000000000000000001100000000000000000000000200000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000011302000000556342000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................231905.009050000000000000000000000000000000000001011031010100152104000000000000000000000031105840011120200102000000043032520020001000000000000320000000000000001210421003000001544407020000000200110030231000111000010000001210000030261300000111200045022000000102166331300138313081861333255642265318121021020222410801048022252787251301072712230110161916345410021513210
........................................................................................................................................................TGACTAGATTTCATGCTCGTG..........................................................................211785.00785000000000200040000000020001500000000200110018201303079140000000000000000000000092210002101000020100100213082521410014131030000000000210000000000115000200000010000005705151130600110008060105406000000010000000000100000510112012000000300000000113111002102001460201100104103371076561524333616511232327028311010110828110062140000302000001000410000011011
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................241767.0076700000000000000000000001000000000000011110020001000020000363360000000000000000010100200301000101100200111501111130011001000100000000000000000000000000011121220000000011000001000000000011030200000101000201000000310000003114301052101014411531101300000000002110000211200030312122022065112703047202403102504306294140340011242820466919154113791510103112812770
........................................................................................................................................................TGACTAGATTTCATGCTCGTCATC.......................................................................241764.007640000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................201754.0075400000000000000000000000002031000000010110021000011321000100000000000000000000000040241111010000000010003630030001000000100000000000000000000010314254510040001000211000202630050110001110023012029011020040400401000081711223762368208010100002000022011000113120031222100469312134255382221211242060021970111137491600894141341015212316157236642351671270
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................191726.0072600000000000000000000010000700000000000000000000010000000000000000000000000005442000000000000000100002002410000000000000000100000000000000000000000112100003000003114251312020200000100120012241807030100000000000001000000552225201211000312000010001101160000000002000111101002001017824197464200101117012102201100001211010018220000011110010502021474010
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................241662.00662000001000100010000000080000000000000401001901011221010000000000000000000000002717131303844360002000221000020188231200311210200000000101200000000000020031412106100000000000012010061020305000010314000000001000007500000001020171121514331876133410310000000110000101012210001011020124409139622011220000040000000000210510000622010000010000000001011200010
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................201581.0058100000000000001000000000204000000003000000010000000010000200000000000000000001010100000100001000010000201252200001100100000000000000000000000100301220017000002216000301200000010012100803100200300002000000100020005312671445334311241000010030110111000101010002151108745212193221402148322524677011511153911112117211976135011326127131542088570
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................231567.005670000100121010000000001000000000000001002010000100431011000000000000000000000020002132031001000000101001101420162000101000000000000100000000000001110100220217000000201101100000000000000042200010101010000000003001000801110100000010710500000000011000110001100006113301025308751241621706102014001031011110152100400261410127365942301536171032100824140
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................191529.005290000000000000000000000000010000000000000000000000010000000000000000000000000181614140010005020001011000000003450000000002000000000013004700000012100212211000000000232257155528210100000310000142037201011000000000000059000000403430010262012100100000000141010200010140511102307000330000001010400420001000010000010120000000000200400700000514110
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................231528.00528000000000000100000000000000000000000100009300010018000100000000000000000000000020221000000110000000000011000000000000000000000000000000000000010101223321000000510026000000000000000000001000000000000000011000000010100012001010100200000201001001010013290502120100101014141951843061622222110010513413352917310033473112003126136001221001305320
droSim2
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------GAGCGCAGCTTTCCATCTSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................221222771.002227716010111315582599446528929010212163992113014333092241365091142
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................231124999.001249992584524675074922953231538183301652026457814215127001
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................20173213.007321350941636922202481162021041081099411771401122406101
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................21130242.0030242690187112234622044181194117826011789115932165491043000
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................22120765.0020765433616522197354442886113585161446057363124051383011
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................2015654.0056544677706257000100013000000
.............................................................................................................................................................AGATTTCATGCTCGTCT.........................................................................1715220.0052200000004728345146001000
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2314064.00406447718311093919351981591521039309180298002
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................2113870.00387028010380494581049183155171162551758562101
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................2413467.0034671122800337359989128038236916000
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................1812271.0022713831887085117163113385200000
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................2012251.002251197919355100000023000000
........................................................................................................................................................TGACTAGATTTCATGCT..............................................................................1712137.002137000000352425671986000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................2212091.0020918551414695371321266550156102844000
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................1911754.001754427801527466566888121161515000
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................2011750.00175052213153147498970365380311254000
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................2311714.001714835174103236212206565015319221506005
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................1811484.001484552000207101453000000
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................2211392.0013921715813010391622307276571397304000
.............................................................................................................................................................AGATTTCATGCTCGTCTA........................................................................1811386.00138611010010141377000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................2211291.001291611280088784933072661445000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2211287.001287713981712001035284541000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................2311095.00109516513300999684137542122347000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................2311008.00100825942252102247542718135503475001
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................211814.0081418059226281418505535332311874000
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................191753.007533041220113310687000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................251680.006800004009595211234260132000
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211590.0059024318412241832234443181317000
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221570.0057087181462233756881261151420000
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................191458.004581001000001455000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................211439.004396715362317974393680610000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................221435.0043514542771000333155204000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211373.00373532207243095124036000
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................191359.00359146297514024865554110000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................241324.003240008178243147511192107000
.............................................................................................................................................................AGATTTCATGCTCGTC..........................................................................161279.002790000000023274000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201274.002741071438009131220147400000
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................181272.00272210185155340219000000
..............................................................................................................................................................GATTTCATGCTCGTCT.........................................................................162262.005240000003726504020000
...............................................................................................................................................................ATTTCATGCTCGTCTA........................................................................161240.002400000000001239000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................221237.002373440001006630167124000
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................201233.002330023000203223000000
..............................................................................................................................................................GATTTCATGCTCGTCTA........................................................................171229.002290000001102225000000
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................231208.002081533600246539011114000
...............................................................................................................................................................ATTTCATGCTCGTCT.........................................................................152205.504110000001307400000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................231178.001781215200481714105910000
.............................................................................................................................................................AGATTTCATGCTCGT...........................................................................151155.001550000000000155000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................211145.0014538101001503330261000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................231145.0014561210011177397000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................241134.00134623132214061731425000
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................201130.001302171928241312691008000
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................231124.00124211500261381071743000
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................201114.00114131011202130068211000
............................................................................................................................................................TAGATTTCATGCTCGTC..........................................................................171113.001130000000011111000000
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................191109.001092035300101171004000
................................................................................................................AACATGGATCTAGTGCACG....................................................................................................................19196.0096232001000088000000
.............................................................................................................GCGAACATGGATCTAGT.........................................................................................................................17195.0095000000320090000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.........................................................................23187.00874663100000001102000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21186.0086310100431814161124000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21186.0086001300144268300000
.................................................................................................................ACATGGATCTAGTGCACG....................................................................................................................18178.0078324000000069000000
............................................................................................................................................................TAGATTTCATGCTCGT...........................................................................16177.0077000000000077000000
............................................................................................................GGCGAACATGGATCTAGT.........................................................................................................................18174.007400002528000021000000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................22173.00730003900335122000000
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20170.007022710107900181400000
...................................................................................................................ATGGATCTAGTGCACG....................................................................................................................16158.0058000000000058000000
...................................................................................................................................GT-GGTTCATGATTAAGTTCG...............................................................................................20157.00571110100010563101000
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................20155.00552103612000110101000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................24152.00522031007141023001000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24149.0049004100764520110000
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................18147.00471033000000031000000
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19143.00438011900000013200000
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24142.004242810026004573000
.............................................................................................................GCGAACATGGATCTAGTGCACA....................................................................................................................22142.0042532000104216054000
...........................................................................................................................................................CTAGATTTCATGCTCGT...........................................................................17141.0041000000000041000000
.............................................................................................................GCGAACATGGATCTAGTGCAA.....................................................................................................................21140.0040000000226630120000
..............................................................................................................CGAACATGGATCTAGTGCA......................................................................................................................19139.0039913151212202001000
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24138.00380010010100211220000
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22137.0037116500013016004000
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................20136.0036831000110019003000
.............................................................................................................................................................AGATTTCATGCTCGTCTAA.......................................................................19133.0033100000001229000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGA-.................................................................................................................24133.0033211000412601042000
..............................................................................................................CGAACATGGATCTAGTGCACGT...................................................................................................................22130.003000500002660038000
............................................................................................................GGCGAACATGGATCTAGTGCACGA...................................................................................................................24128.0028003000911012011000
..............................................................................................................CGAACATGGATCTAGTGCACGGT-.................................................................................................................23127.0027113000104210023000
.............................................................................................................GCGAACATGGATCTAGTGCAT.....................................................................................................................21126.0026000000102020021000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA........................................................................24126.0026214100211311000000
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24125.0025301100011113013000
....................................................................................................................................................TTCGTGACTAGATTTCATGCTCGTCT.........................................................................26124.0024154000012002000000
...............................................................................................................GAACATGGATCTAGTGCAC.....................................................................................................................19123.0023020011123013000000
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................18123.002346121000018000000
................................................................................................................................................................TTTCATGCTCGTCTA........................................................................15223.0046000000100243000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCG.........................................................................23121.0021821000000000001000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA......................................................................25121.002100020044740000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTTA.........................................................................22121.002120000023324023000
.............................................................................................................GCGAACATGGATCTAGTGCACGC...................................................................................................................23120.0020200000001030014000
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................22120.002001010011215035000
...........................................................................................................CGGCGAACATGGATCTAGTGCAC.....................................................................................................................23119.001950200035001021000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGG...........................................................................21119.001991700000002000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19119.001980020000008100000
...............................................................................................................GAACATGGATCTAGTGCACGG...................................................................................................................21118.001810330027100010000
..............................................................................................................CGAACATGGATCTAGTGCACGGA-.................................................................................................................23118.001841400012201111000
.......................................................................................................................................................GTGACTAGATTTCATGCTC.............................................................................19118.0018000051100002000000
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21317.00514012000212425010000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATA......................................................................25116.001600010014640000000
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23116.001620700031000102000
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................23116.001621410010103003000
...............................................................................................................................................................ATTTCATGCTCGTCTAA.......................................................................17115.0015000000000015000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-T................................................................................................................25115.001500100036002003000
droSec2
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-----------------AACGAAGA------------GAGCGGAGCT-TCCATCTSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22134073.0034073119483215102708640
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................20118514.001851410936027103810356
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................22113148.0013148248550788304755
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................23110282.0010282321849544762093
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2116391.006391210312968802112
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2312074.002074440418824392
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211833.00833826124
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211783.0078328630233162
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201554.005543291773315
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191506.005063442132109
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231480.004802475125157
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................201308.00308122952764
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................231273.0027369757752
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................211249.0024919825188
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221233.002337994798
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................231227.00227332111558
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................221222.0022281594537
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221202.00202198031
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201145.00145143101
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................191143.0014321610106
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................231137.001375352527
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................221121.0012123174635
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221113.0011351153215
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................211102.0010213341639
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211101.0010130124118
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24195.0095730184
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24187.0087600216
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19178.007870017
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21178.0078353562
...................................................................................................................................GT-GGTTCATGATTAAGTTCG...............................................................................................20173.007344587
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19172.00723621321
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21169.00692118030
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24156.0056663311
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19146.0046341101
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................22142.00421641012
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20140.0040159214
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20136.0036811413
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18136.003650256
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................18130.003091020
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23129.002915239
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................20129.002918605
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................20128.002817317
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................23126.002616316
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22125.002548211
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24124.00244875
........................................................................................................................................................TGACTAGATTTCATGCTCGA...........................................................................20124.002421120
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18124.002424000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................21120.00207805
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................19117.00171817
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24117.001732111
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19115.001513011
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23115.00157053
........................................................................................................................................................TGACTAGATTTCATGCTCTA...........................................................................20115.001510050
..............................................................................................................CGAACATGGATCTAGTGCACGGT-.................................................................................................................23114.00142543
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18113.00134180
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................20113.00134207
.............................................................................................................GCGAACATGGATCTAGTGCACA....................................................................................................................22112.00124332
............................................................................................................GGCGAACATGGATCTAGTG........................................................................................................................19112.00125106
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................22112.00122334
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21411.7547291710
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................24111.00118030
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA......................................................................25111.001111000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTT........................................................................21111.00116410
..............................................................................................................CGAACATGGATCTAGTGCA......................................................................................................................19110.00109010
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-T................................................................................................................25110.00102341
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................2419.0095022
.........................................................................................................................................................GACTAGATTTCATGCTCGTCG.........................................................................2119.0099000
.............................................................................................................GCGAACATGGATCTAGTGCACC....................................................................................................................2219.0091512
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................2219.0099000
..............................................................................................................CGAACATGGATCTAGTGCACGT...................................................................................................................2218.0083104
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................2218.0084121
........................................................................................................................................................TGACTAGATTTCATGCTCGTAA.........................................................................2217.0071402
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................2417.0070142
.......................................................................................................................................................GTGACTAGATTTCATGCTCG............................................................................2017.0071024
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................2117.0077000
........................................................................................................................................................TGACTAGATTTCATGCTCGTTA.........................................................................2217.0071213
.............................................................................................................GCGAACATGGATCTAGTGCACGGA-.................................................................................................................2416.0060015
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................1816.0061023
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................2516.0065010
............................................................................................................GGCGAACATGGATCTAGT.........................................................................................................................1816.0061041
.............................................................................................................GCGAACATGGATCTAGTGTT......................................................................................................................2016.0060303
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA........................................................................2415.0055000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAT.......................................................................2315.0055000
.............................................................................................................GCGAACATGGATCTAGTGCACGC...................................................................................................................2315.0051121
............................................................................................................GGCGAACATGGATCTAGTGCACGGT-.................................................................................................................2515.0051121
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTAT.......................................................................2215.0053110
droYak3
G---------------------------------------------------------------------------------ATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-------------------------------------------------------SizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22119814.0019814394542232499483401577361100115
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2017712.00771233736631052726451033155910259
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2215385.0053854691133119641023747214602060
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................2314758.0047581820414151105456625940022
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2114125.00412552311245091476039752400004
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2312050.0020501222751041387287111210130
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................2211207.0012075231129181310000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211452.004520444302210000
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................201371.003713661040000000
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................221325.00325111228593310010
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211312.003122772171771770040
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231261.00261191776677120000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201259.002592941406101330000
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................231226.0022610421193024160030
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191211.002111992801739351000
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................201184.0018415002601340000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221141.001410140010000000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................231138.001385118103741080000
...................................................................................................................................GT-GGTTCATGATTAAGTTCG...............................................................................................201117.0011701579200030000
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................211117.001171687723110000
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................211101.0010111250283510010
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19199.0099009801000000
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................20196.0096096000000000
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................20196.009664412784130020
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22196.00965491057650000
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20187.00871659190200000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................22173.007303614731210000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................24162.00620421170200000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24159.0059472770390011
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21153.00530241022240000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................24153.0053033852500000
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................22152.0052972361330000
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21151.00514900102620000
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23151.00511219321120020
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19143.0043043000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23138.0038174512000000
........................................................................................................................................................TGACTAGATTTCATGCTCC............................................................................19136.0036103500000000
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21132.0032013000010000
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20131.0031171120190000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................22131.0031136004800000
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18130.0030192710100000
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22129.0029531401420000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21126.002692252420000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24126.0026318301100000
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23122.0022121621000000
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................20121.002147610210000
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19120.0020051102110000
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19119.0019211210030000
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................18118.001809103500000
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................23117.0017201310010000
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24115.0015021010110000
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24115.001516800000000
.............................................................................................................GCGAACATGGATCTAGTGCACC....................................................................................................................22115.001521800220000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23115.001537001220000
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24114.001412710030000
..............................................................................................................CGAACATGGATCTAGTGCACGGT-.................................................................................................................23113.0013001010200000
........................................................................................................................................................TGACTAGATTTCATGCTCTA...........................................................................20112.0012001200000000
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................22111.0011010100000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-T................................................................................................................25110.001001520200000
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18110.001023300110000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................2119.00904302000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG.......................................................................2419.00909000000000
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................1818.00808000000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................2418.00803311000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................1918.00807000010000
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.........................................................................2318.00860200000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCC.........................................................................2017.00730400000000
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................2317.00703300100000
........................................................................................................................................................TGACTAGATTTCATGCTCTC...........................................................................2017.00700700000000
.............................................................................................................GCGAACATGGATCTAGTGCACGGC-.................................................................................................................2417.00700700000000
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................2017.00714100010000
.............................................................................................................GCGAACATGGATCTAGTGCACA....................................................................................................................2217.00702200120000
............................................................................................................GGCGAACATGGATCTAGTGCACGGT-.................................................................................................................2517.00711110120000
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................1916.00604000020000
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................2316.00610310010000
...............................................................................................................GAACATGGATCTAGTGCACGG...................................................................................................................2115.00513000010000
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-GG...............................................................................................................2615.00502110010000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTT........................................................................2115.00501000040000
droEre2
T-----------------------------------------------------------------------------------GCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCAC-------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
........................................................................................................................................................TGACTAGATTTCATGCTCGTCT.........................................................................22128129.00281291443950434325532550661932
........................................................................................................................................................TGACTAGATTTCATGCTCGT...........................................................................2018329.008329119811351180199345888
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTA........................................................................2317696.0076963582544724874111866824
........................................................................................................................................................TGACTAGATTTCATGCTCGTC..........................................................................2115867.005867303710551289747136710
.............................................................................................................GCGAACATGGATCTAGTGCACG....................................................................................................................2213824.003824925929416216369087
............................................................................................................GGCGAACATGGATCTAGTGCACG....................................................................................................................2311878.0018783481264618755454374
.........................................................................................................................................................GACTAGATTTCATGCTCGTCT.........................................................................211997.00997985030270
..........................................................................................................................................................ACTAGATTTCATGCTCGTCT.........................................................................201399.003992372041089390
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTT........................................................................231322.003221410352228735
........................................................................................................................................................TGACTAGATTTCATGCTCG............................................................................191294.00294168017251560
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTA........................................................................221248.002482350101011
........................................................................................................................................................TGACTAGATTTCATGCTCGTCA.........................................................................221233.0023317626112360
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.........................................................................231220.002204807262610013
.............................................................................................................GCGAACATGGATCTAGTGCACGG...................................................................................................................231210.0021054814452474
.............................................................................................................GCGAACATGGATCTAGTGCA......................................................................................................................201194.001945407091420
.........................................................................................................................................................GACTAGATTTCATGCTCGTC..........................................................................201188.00188184010120
........................................................................................................................................................TGACTAGATTTCATGCTCGTCC.........................................................................221181.001811914921280
.............................................................................................................GCGAACATGGATCTAGTGCAC.....................................................................................................................211157.0015773164236260
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT.......................................................................241132.001327308221433
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA.......................................................................241111.00111861200418
..............................................................................................................CGAACATGGATCTAGTGCACG....................................................................................................................21198.009880211590
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTC..........................................................................22194.00942438630230
............................................................................................................GGCGAACATGGATCTAGTGCAC.....................................................................................................................22189.00891244158136
.........................................................................................................................................................GACTAGATTTCATGCTCGT...........................................................................19183.008372000290
.............................................................................................................GCGAACATGGATCTAGTGC.......................................................................................................................19177.00771501012490
.......................................................................................................................................................GTGACTAGATTTCATGCTCGT...........................................................................21172.0072608026320
............................................................................................................GGCGAACATGGATCTAGTGCA......................................................................................................................21168.00689146710220
........................................................................................................................................................TGACTAGATTTCATGCTCT............................................................................19162.0062420003170
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTC........................................................................23160.0060190751262
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTA........................................................................21158.0058341011570
.............................................................................................................GCGAACATGGATCTAGTGCACGT...................................................................................................................23158.0058200103070
.............................................................................................................GCGAACATGGATCTAGTG........................................................................................................................18149.0049100104340
............................................................................................................GGCGAACATGGATCTAGTGCACGT...................................................................................................................24148.004820003736
..............................................................................................................CGAACATGGATCTAGTGCACGG...................................................................................................................22148.00481720311132
...................................................................................................................................GT-GGTTCATGATTAAGTTCG...............................................................................................20147.00471041711140
...........................................................................................................................................................CTAGATTTCATGCTCGTCT.........................................................................19143.0043240001090
........................................................................................................................................................TGACTAGATTTCATGCTCTCT..........................................................................21140.004030100450
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTG........................................................................23132.0032150010151
........................................................................................................................................................TGACTAGATTTCATGCTC.............................................................................18128.0028121010140
........................................................................................................................................................TGACTAGATTTCATGCTCGTT..........................................................................21125.00256081370
............................................................................................................GGCGAACATGGATCTAGTGC.......................................................................................................................20124.002425011060
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-.................................................................................................................24122.002250201230
.............................................................................................................GCGAACATGGATCTAGTGT.......................................................................................................................19121.002120001360
........................................................................................................................................................TGACTAGATTTCATGCTCGTG..........................................................................21119.001918000010
........................................................................................................................................................TGACTAGATTTCATGCTCGC...........................................................................20119.00191411390
..............................................................................................................................................................GATTTCATGCTCGTCTA........................................................................17118.001800000018
............................................................................................................GGCGAACATGGATCTAGTGCACT....................................................................................................................23118.001821020121
..........................................................................................................................................................ACTAGATTTCATGCTCGTC..........................................................................19117.001711200310
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG.......................................................................24117.001714200010
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTT........................................................................22116.001614000020
.............................................................................................................GCGAACATGGATCTAGTGCACT....................................................................................................................22115.00150021390
...........................................................................................................................................................CTAGATTTCATGCTCGTCTA........................................................................20115.00158001303
...............................................................................................................GAACATGGATCTAGTGCACG....................................................................................................................20115.00157002420
............................................................................................................................................................TAGATTTCATGCTCGTCT.........................................................................18113.00133300160
..............................................................................................................CGAACATGGATCTAGTGCAC.....................................................................................................................20113.00138000050
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA......................................................................25113.001313000000
........................................................................................................................................................TGACTAGATTTCATGCTCGG...........................................................................20113.00136102130
............................................................................................................GGCGAACATGGATCTAGTGCACGG...................................................................................................................24112.00125100510
...........................................................................................................CGGCGAACATGGATCTAGTGCACG....................................................................................................................24112.00122202330
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAT.......................................................................23111.001110000100
............................................................................................................GGCGAACATGGATCTAGTGCACC....................................................................................................................23111.00110201080
.........................................................................................................................................................GACTAGATTTCATGCTCG............................................................................18110.00109000010
.............................................................................................................GCGAACATGGATCTAGTGCACGGT-T................................................................................................................25110.00102010340
............................................................................................................................................................TAGATTTCATGCTCGTCTA........................................................................19110.00104000114
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT......................................................................25110.001010000000
........................................................................................................................................................TGACTAGATTTCATGCTCTA...........................................................................20110.00106001030
........................................................................................................................................................TGACTAGATTTCATGCTT.............................................................................1819.0090000090
............................................................................................................GGCGAACATGGATCTAGTGCACA....................................................................................................................2319.0090000360
.........................................................................................................................................................GACTAGATTTCATGCTCGTCA.........................................................................2119.0099000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC.......................................................................2419.0097002000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCG.........................................................................2218.0086020000
........................................................................................................................................................TGACTAGATTTCATGCTCGTA..........................................................................2118.0085000030
.............................................................................................................GCGAACATGGATCTAGTGCACA....................................................................................................................2218.0080010520
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA......................................................................2518.0088000000
.............................................................................................................GCGAACATGGATCTAGTGCACGA...................................................................................................................2317.0072000104
.......................................................................................................................................................GTGACTAGATTTCATGCTCGTT..........................................................................2217.0070001150
.........................................................................................................................................................GACTAGATTTCATGCTCGTCG.........................................................................2117.0077000000
..............................................................................................................................................................GATTTCATGCTCGTCTC........................................................................1716.0060000006
..............................................................................................................CGAACATGGATCTAGTGCACGGT-.................................................................................................................2316.0061101120
.........................................................................................................................................................GACTAGATTTCATGCTCGTCTAA.......................................................................2316.0066000000
..........................................................................................................................................................ACTAGATTTCATGCTCGTCTT........................................................................2116.0063000210
..........................................................................................................................................................ACTAGATTTCATGCTCGT...........................................................................1815.0052100110
...........................................................................................................................................................CTAGATTTCATGCTCGTC..........................................................................1815.0055000000
........................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG.......................................................................2415.0055000000
...............................................................................................................GAACATGGATCTAGTGCACGG...................................................................................................................2114.0044000000
............................................................................................................GGCGAACATGGATCTAGTGCACGGT-.................................................................................................................2514.0043000010
.......................................................................................................................................................GTGACTAGATTTCATGCTCG............................................................................2014.0042010100
..............................................................................................................CGAACATGGATCTAGTGCA......................................................................................................................1914.0042010100

Generated: 10/20/2015 at 07:01 PM