ID:

dmo_1442

 Coordinate:

scaffold_6500:1895230-1895380 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.9 -38.8 -38.6

Flybase annnotation

CDS [Dmoj\GI15266-cds]; exon [dmoj_GLEANR_1602:1]; intron [Dmoj\GI15266-in]

No Repeatable elements found

mature
  1. scaffold_6359:2529238-2529258 -
  2. scaffold_6496:14120241-14120261 -
  3. dmo_1442  scaffold_6500:1895251-1895271 -
  4. scaffold_6500:24522933-24522953 +
  5. scaffold_6540:31969556-31969576 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCAGCAGCAGCAGCTGGGTGAGTGTTGACCGTTTGTCTTGTCAGATAAGCAGCTGAGATGAATGGCAAGGAAATCAGTTTGATTGATAATGCAACTAAGCGTTGCAAGTGGCAGCGGGACGGAGCAGGGGCTGGGGCTGGGACTGGGAATGGCAGCGCAAATTGTTGCACACTTATAAATAAAATAGATTTTGCATGTTCAGCTTGAGCTGGTAGCTT
**************************************************.......(((.(((((((((...((((........))))))))))))))))....((((((...))))))...(((((...(((((((......((((((.....(((....)))....)))...)))......))))))).....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V056
head
 M046
female body
 V110
male body
............................................................................................................AGTGGGCTTGATAATGCAACT.......................................................................................................................... 21 3 2 0.50 1 0 1 0 0
........................................................................................................................................................CGGAGCGGGGTCTGGGGCTGC.............................................................................. 21 3 4 0.25 1 0 0 1 0
.............................................................................................................................................TGGCAGGGGGACTGAGTAGGG......................................................................................... 21 3 4 0.25 1 1 0 0 0
...............................................................................................................................................................GGGGCTGGGGCTGGGACTGGG....................................................................... 21 0 5 0.20 1 1 0 0 0
.................................................................................................................................................AGCGGGACGGAGCAGGCT........................................................................................ 18 2 6 0.17 1 1 0 0 0
.......................................................................................................................................................................GGCCGGGACCGGGTATGGC................................................................. 19 3 18 0.06 1 0 0 0 1
...................CAGCAGCAGCAGAAGCAGCA.................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1
..........CAGCAGCAGCAGCAGCAGCAGAAG......................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0
..AACAGCAGCAGCAGCAGCAGCAG.................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0

Anti-sense strand reads

AGTTGTCGTCGTCGTCGTCGTCGTCGTCGTCTTCGTCGTCGTCGTCGACCCACTCACAACTGGCAAACAGAACAGTCTATTCGTCGACTCTACTTACCGTTCCTTTAGTCAAACTAACTATTACGTTGATTCGCAACGTTCACCGTCGCCCTGCCTCGTCCCCGACCCCGACCCTGACCCTTACCGTCGCGTTTAACAACGTGTGAATATTTATTTTATCTAAAACGTACAAGTCGAACTCGACCATCGAA
**************************************************.......(((.(((((((((...((((........))))))))))))))))....((((((...))))))...(((((...(((((((......((((((.....(((....)))....)))...)))......))))))).....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
...................................TCGTCGTCGACGACCCGCTAAC.................................................................................................................................................................................................. 22 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:1895180-1895430 - dmo_1442 TCAACAGCAGCAGCAGCAGC---AG---CAGCAGCAGAAGCAGCAGCA---GCAGCTGGGTG-AGTG--------------------------------------TTGACCGTTTGTCT-------------------------------------------TG----T------------------------------------------------------------------------CA-GATAAGCAGCTGAGA-----------------------------------------------------------------------------------------TG----------------AATGG-----------------------------------------------------CAAGGAAA------------------------------------------------------TCAGTTTGATT----GATAATG------------------------------------------------CAACTAAGCG----------TT-------------------------------------------GCA-----------------AGTGGCAGCG------------------------------------------------------------------------------------------------GGACGGAGCA-------------GGGGCTGGGGCTGGGACTGGGAATGGCAGCGCAA----------------------ATTGTTGCACACTTATAAATAAAATAG----------------ATTTTGCA-TGTTCA---------------------------------------------------GC-T-----------------------------------------------------------------------------------------TG--------------AGCTGGTA-GCTT
droVir3 scaffold_12963:9391084-9391293 + GGCGAG-TG------------------------------------------------------------------------------------------------TTGACCGTTTGTCTTTGGGTTTGGG--------------------------------TG----C------------------------------------------------------------------------CA-GATAAGCAGCTGAGA-----------------------------------------------------------------------------------------TG----------------AATGG-----------------------------------------------------CTCGGAAA------------------------------------------------------TCAGTTTGATT----GATAATG------------------------------------------------CAACTAAGTG----------TG-------------------------------------------GCA-----------------AGTGGCA------------------------------------------------------------------A----------------G----------TGG-TAGCG-------------------AAAGGGA---------GAGAGAGAGAGA----GAGTGCAGGCAAGTGGATTGGGGGGTTGAGGCACACTTATAAATAAAATAGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---AT-----GA--------------AGTTGGTA-GCTT
droGri2 scaffold_271:1804-2030 - GCGGCAGCAGCAGCAGCGGC---AG---CAGCAGCAGCGGCAGCAGCA---GCAGCAGCGGC-AGCA-----------------GCAGCAG------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCG---------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAGCAGCGCCAGCAG------------CAG---------------------------------------------------------------------------------------------------------------------------------------CGGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCGGCAGC----------------------GGC----------------------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------------------------------------------AGCA----GCAGCGGCAGCAG-------------CAGCA------GCGGC------------------------------------------------AGCGGCAGCAGCAGCATCAGCAGCAGCAAA------AAC------GG-CAGCAC-----TA--------AC-AGC
droWil2 scf2_1100000004963:1848239-1848494 - TAACCA-CCGCAGCAACGGC---AACAGCAGCAGCAACAGCAACAGCA---ACAGCAA-------CG-----------------------------CGGCTAGTATTGCTCAAGTGTCG--------------CCCA------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAGA-ACG---------------------------------------------------------------------ACAA-------------------------------------------------------------------------------------------------------------------------------------TTGCT-GGCGTCGCTACCAACAATTCCACTGGCAGCGAACGCAT----------------------------------------------------C---------------------------------------------------------------AGCAATGGACCAATTG---GTGGCGGTGGCG-------------GAGGCGGAGGCGGAGGTGGGGATCAGCA----TA----------------------------GCGCTCTGATGGATGAATTCA----------------AGCGAG--C-------ACACCA----------------------------------------------------------------------------------------------------------------------GCGTATGTT---CA-----GG--------------AACGGGTT-CCAT
dp5 XR_group8:1662809-1663042 + ACAACAGCAGCAGCAGCAGT---GG---CAACAATAGCAGCGGCAACA---GCGACAGTGGC-AACG-----------------------------ATG---------GCAG-----------------------------------------------CCTCACCGGATCCACGGGCAC---------CCTGGATAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------GCAGCAGCGTCAGCAG------------CAAT-------------------------------------GATTC-G------------------------------------------------GGCAAGAGCAGTGCA-GAGGGCGCCGGCGGTGGAGG------------C----------------------------------------------------------GGTGCCAGTGGCAG--------------------------------------------------------------------------------------------------------------------TGGCAGCACCA----------------------GT------------------------GGCG-TGAATGCCTGG-GCCCTGCA-GCAGCA----GCA-----------------------------------------------------------------------------------------------------------------------------------------AC--------------AGACGGCA-GCGT
droPer2 scaffold_25:402326-402558 - TCAGCAGCAGCAGCAGCAGC---AG---CAGCAGCAGCAGCAGTACCA---GCAGCAGCAGG-AGCA-----------------GGAGCAG------------------------------------------------------------------------------------------------------------------------------------------CAGCAGT---------------------------ACCAGAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGC------------------------------------------------------AGCAGTAC---------------------------------------------------------------------------------------------CAGAAGCAGCAGCATCAGCAGCAGCAGCAGCAGTACCAACAGCAGCAGGAGC----------------------AGG----------------------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------------------------------------------AGCA----GCAGTGGGAACAG-------------CAGCA------GCAAC------------------------------------------------GGCAGCGGCAGCAGTACCAGCAGCAGCGGC------AGTG------CC-AGCAG-----CA--------GG-AGC
droAna3 scaffold_12916:11678993-11679219 - ACAGCGGCAGCAGCATCGGC---AT---CAGCAGCAGCGGCAGCAGTT---GCTGTCATAT---------G-----------------CGTGTGTGC-------------G--------AGG---------------------------------------------------------------------AAA---------------------------------------GGAGTTTGGAGGGGGGAAGGCTGGAG------ATGGAGCTGGGAGGGTGGGTGGTATTTGGGGGGGGTGGTCAATGGGGCTGTCAGACAGATGG--GCAGCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGTTGCATACTTTTAGGC---------------------------------------GCATCG-ATG----CATTT--------------------------------------------------------------------------------------------------TTACAGGGGT------TTG------GG-GACCGT-----TT--------T-TTTT
droBip1 scf7180000395814:18702-18919 - CCAGCAGCAGTTGGACCTGG---AG---CAGCAGCAACAGCAGCAGCA---TCATCATGTGACT--G-------------------------TGGAC-------------G--------AGA---------------------------------------------------------------------TCATTGAGCTGCCCACCTCGACGGCGGGACAGGGACATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----GG---------------ACA------------------------------------------------TG----GACACAG------------------------------------------------CAACAACAAG----------CA-------------------------------------------ACA-----------------G-----------------------------------------------------------------------------------------G----------CGG-CAGCG-------------------GGGGCGA---------CGGGGGGCGGCA----CGATGCTGGGGAATT-------------------------------------------------------------------------------------------------------------------------------------T---ACCGTTG-GGTAAGT----------------------------------------AAT------ATC------GG-TTCCGT----TC---------C-GCAT
droKik1 scf7180000302698:592479-592711 + GCAGCAGCAGCAGCAGTAGC---AG---CGCCAGCACCAGCAGCAGCA---GCAGCAACGCC-AGCATAGG-----------------CAGCGACGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GCAG------------CAGCATGTCCAAAACAAGCAGCGCAA----ATCCAC-----A----------------------------------------------------------------------AGCATCAGCAGCAGCAGCAGCAACAGC-------------------------------------------------------------------------------------------------------------------------------AGCGCG--------CG---GCAGCAGCAGCAGCAACAGCAGCTG-------------------------------------------------------------------------------------------------------------CAGCA-GCGGCTG---------------------------------------------CAAA-----TGCA----ACAAATGCCGCCGATTTTAG---------------------------------------------------------TGCTTTCGATT-TTAACGATA-GCTC
droFic1 scf7180000453901:720858-721090 - GCAACAGCAGCTGCAACAGC---AA---TTGCAGCAGCAGCAGCAACA---GCAGCCGT------CG--CCCA----------------------------------------------------------------------------------------------------------TGTTGGGCAGACCA-GCG----GCAC-CCTCCGCGGAGATGCAGCGATATGTGCAGAGGATGCAACAGC-------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAACAGCAGCAG-----------CAGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGAGTTGTACCG---CCAGCAACAGCAGCAGCAGCAGCTG-------------------------------------------------------------------------------------------------------------CAGCA-GCAACA-TCG----CACCAG-------------CATGA------------------------------------------------------------------------------------GCGGC------ATTG------CCAGCCAG-----CA--------GC-ACT
droEle1 scf7180000491047:1357703-1357958 + ACAACAGCAGCAGGAACACC---AT-CGCAGCAGCAACAGCAGCAGCA---------A---GCTGCG--CCT----------------TCAGTTTTG------------------------------------CAACAGCATTTGG--------------GTCACCTGAATTAC------------------------------------------------------------------GAAAGTGG-----AGCAAC-------TGCAGC-----------------------------------------------------------------AGCAGCAGCAACCAGTAGAAGT----------GGCTCGGCAACACTGGCGC----AGCATTT----------------------------------------------------------------------------------------------GGC------AACACC------------------------------------------------CAGCAACATA----------TT-------------------------------------------GCA-----------------GGCGGCA------------------------------------------------------------------T----------------T----------C---------------------------------------------------GG-----------------------------------------------------------------------------------CAGCA-GCAACTT--------------------------------------------------GCAACACAT---ACTAACGCGGTCCGCCCCCT---------------------------------------------------------CGCCCTCGTCCTCCAACA-----ACT
droRho1 scf7180000779588:524204-524446 + A--ACAGCAGCAGCAACAGCAGTCC---GTGCAGCAGGCGCAGCAGCA---GCAGCAG---ATCACG--CCCGGTCTGGTGGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGT----GGCTCCCTGAAAC------------------------------------------------------------------------------------------------------------------------------------------------------TGGAACCGCAGC------------------------------------------------------AGATGGAT---------------------------------------------------------------------------------------------TTTTACTCGCAGCGATTGCGT----------------------------------------------------C---------------------------------------------------------------AGCTT--------------GCGGGCACAACA-----------------------------------------------------------------------------------------------AGCCCTG---------G-------------------------------A--------------------------------------------------GCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCTCGACAGAAGCAATCGCCGCACTTCG------CGAGCCCCT----CGCCC-----TC--------GC-AGC
droBia1 scf7180000301345:8631-8875 - GCAACAGCAGCAGGGTGTGC---AG---CAGGCGCAGCAGCAGCAGCAGCAGCAGCAG---ATCACA--CCTGGTCTGGTGGGCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGT----GGCTCGCTGAAGC------------------------------------------------------------------------------------------------------------------------------------------------------TGGAACCGCAGC------------------------------------------------------AGATGGAT---------------------------------------------------------------------------------------------TTTTACTCGCAGCGATTGCGT----------------------------------------------------C---------------------------------------------------------------AGCTT--------------GCGGGCACAACA-----------------------------------------------------------------------------------------------AGCCCTG---------G-------------------------------A--------------------------------------------------GCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCTCGACAGAAGCAATCGCCGCACTTCG------CGAGCCCCT----CGCCC-----TC--------GC-AGC
droTak1 scf7180000415857:650372-650648 - CTGGCAGCAGCAACAGCAGC---AG---CAGCAGCAACAACAGCAGCAGCAACAGCAA---TCC-CT-----------------G-------GCTG---------CCG-----------AGGGTTATGCC--------------------------------TC----C------------------------------------------------------------------------CAGGGCGAGCGACTGCAT-----------------------------------------------------------------------------------------CT----------------AAA-------------------------------------------------------CACCCGCA------------------------------------------------------TCAAGTCGAT-----GATTATG------------------------------------------------CGTAAGAGCGATCCCAAGGATCCGCCGCCGGACTTGCAGCAGCAACCTGTGCAGGTGCAACAGCAGCAGCAACAGTCGGCGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA-GCAACA-ACA----GACCGGTCATTTTTTATCGTATAGCCACCATCTCCGGC-C-----------------------------------------------------------------------------------------CG--------------AAGCGG-C-GCTG
droEug1 scf7180000409538:185348-185552 + GCAGCAGCAGCTGCAGTAGC---AG---CAGCAGCAGCAGCAACGCTA---GCGTCGGCAGC-GACG-----------------------------CCA---------------------------------------------------------------------------------------------------------------------------G------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGTCCAAAACAAGCAGCGGGAA---------TCCGAG----T---------------------------------------------------------------------------------------------------GCAGCAGCAACACAAGCAGCAGCAGCAGCCGCTG-------------------------------------------------------------------------------------------------------------CAGCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------GCA----G-------------------------------------CAAGTGCAACAAATGCCGCCAATGCCGCCGATTTCAG---------------------------------------------------------TGCGTTCGACT-TTAACGATA-GTTC
dm3 chrX:10593389-10593624 + CCAGCAGCAGCAGCAGCAGC---AG---CAGCAGGACCAGTCGCAGCA---GCAGCCGCATC-AGCA-----------------------------------------GTTG-----------------------------------------------CCCTA----C------------------------------------------------------------------------CA-GCAACGCGGCTACTA-----------------------------------------------------------------------------------------CGCACTGA-ACGGCAGCT----------TGGAGCTAGATTGCGACACCAGCAAC--------------------ACGAACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAACAT----------------------------------------------------T---------------------------------------------------------------GGCTA--------------CCAGCAACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGCA---------------------------------------------------------ACCGCCGTTGATCCTGTCG------------------------------------------------CAG---GC-----TC--------------TGCTGTCG-CCAT
droSim2 2r:17594257-17594467 - C-AGCAACATCAGCAGCAC---------CAACAACACCAGCAGCATCA---GCAGCAGGGTG-GTGGTGGG-----------------CCTGTCTCC------------------------------------CAGCAGCAAATGG---------------------------------TGCCGGTCAGTGTG-GCG----GC--------------------------------------------------------------------------------------------------------------TGCCTTCCAGGTGGCTGCAGCCAATGCCGCTGCTGCCAATGGAAACGGAGGCT----------CAACGCTGGATCCCAATGCTAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------------------------A--C-------ACG----------------------------------------------------------------------------------------------------------------------CCGAAGAATGGC---AA-----CA--------------TGATGGTG-GTGT
droSec2 scaffold_13:1773087-1773350 - TCCACATCAGCGGCAGCAGC---AG---CAGCAGCATGAGCAAGAGCA---GCAGCATCTGG-GT-T-----------------------------------------------------------TCGAT----TCAAA---GTCAACGACTTCCGTTCCGTGCCAAAGCCG-------------------------------------------------G------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGCCCCAAGCAAATTACTTAATTAAATGGAC-----A--------------------------------------------------------ATTA--------------AC-------------------------------------ACCCGAGCA-----------------GGAGGAACCGGGGCGGGATGG-GGGGCCAAAGGCCATGGGAGGATGGATAGGATGGCCGGAATGGCAGAGGCAGAGGGCAGGAAGAA-T---------------------------------------------------------------GAGTA--------------------------------------------------------------------------------ATGTGA---------------------------------------------------GC-AAG-----------------------------------------------------------------AGTAA--------------------------------------AAA-TTTC
droYak3 3L:4423639-4423860 + GCAGCAGCGGCAGCAGCAGC---AG---CAGCAGCAACAGCAGCAGCC---GCATCAGCACT-GA-----A-----------------TT------------------------------------TGCATAAAGGCAAA------------------------------------------------------------------------------------------------------------GGAGGGTCAGG-----------------------------------------------------------------------------------------TG----------------AAAGG-------------------------------------------------------GGGCAA---------CCAACTGCTCTGCTGGTGTCATGGTGCCCA-AAAAACCAGACAAAC---------GCCAAG----TGCACAGCATGGCAAACGAGGAAGGAGCCCCAGTCGCGCTGCCCATGATGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATG---------------------------------------------------------------------------------------------------------------------------------------------------------------GAC---GT-----GT--------------TGCTGGTG-GCTT
droEre2 scaffold_4690:14316307-14316527 - ACAGCAGCAGCAGCAGCAAC---AA---CAACAGCAGCAGCAACAGCA---------A---TCGATG--GGTGATC-------------------------------------------------------------------------------------------------------------------CTGCTGATCAT--------------------------------------GCAACATC-------------------------------------------------------------------------------------------------------------------------------------------------------GACGTCAGCGGGAGCAGCAACAT-----TG---------------GCGG------------GAT-----------------CCT----------------------------------------------------CCATTTACGGTGCAGACGATGCA-------GGTGCG-GGTGTTGCTAGTGGCGGTGT------------TGGTGT----------------------------------------------------------TGGTGGTA-----------------------------------------------------T---------------------------------------------------------------TAGCAGTGCGA----------------------TT------------------------AGCGGTG---------G-------------------------------A--------------------------------------------------TTTGGTGGTGCGGCTGAG------------------------------------------------------------------------CC--------GC-AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCAACAGCAGCAGCAGCAGC---AG---CAGCAGCAGAAGCAGCAGCA---GCAGCTGGGTG-AGTG--------------------------------------TTGACCGTTTGTCT-------------------------------------------TG----T------------------------------------------------------------------------CA-GATAAGCAGCTGAGA-----------------------------------------------------------------------------------------TG----------------AATGG-----------------------------------------------------CAAGGAAA------------------------------------------------------TCAGTTTGATT----GATAATG------------------------------------------------CAACTAAGCG----------TT-------------------------------------------GCA-----------------AGTGGCAGCG------------------------------------------------------------------------------------------------GGACGGAGCA-------------GGGGCTGGGGCTGGGACTGGGAATGGCAGCGCAA----------------------ATTGTTGCACACTTATAAATAAAATAG----------------ATTTTGCA-TGTTCA---------------------------------------------------GC-T-----------------------------------------------------------------------------------------TG--------------AGCTGGTA-GCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCTGGGGCTGGGACTGGG..........................................................................................................................................................................................................................................................................2150.201001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG------------------------------------------------------------------------------------------------GGACGGAGCA-------------GGCT...........................................................................................................................................................................................................................................................................................1860.171001000
...................C---AG---CAGCAGCAGAAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
..........CAGCAGCAGC---AG---CAGCAGCAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..AACAGCAGCAGCAGCAGC---AG---CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droVir3
GGCGAG-TG------------------------------------------------------------------------------------------------TTGACCGTTTGTCTTTGGGTTTGGG--------------------------------TG----C------------------------------------------------------------------------CA-GATAAGCAGCTGAGA-----------------------------------------------------------------------------------------TG----------------AATGG-----------------------------------------------------CTCGGAAA------------------------------------------------------TCAGTTTGATT----GATAATG------------------------------------------------CAACTAAGTG----------TG-------------------------------------------GCA-----------------AGTGGCA------------------------------------------------------------------A----------------G----------TGG-TAGCG-------------------AAAGGGA---------GAGAGAGAGAGA----GAGTGCAGGCAAGTGGATTGGGGGGTTGAGGCACACTTATAAATAAAATAGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---AT-----GA--------------AGTTGGTA-GCTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------TG-------------------------------------------GCA-----------------AGTGGCA------------------------------------------------------------------A----------------G----------TGG-.......................................................................................................................................................................................................................................................................................................................19190.214000000000200000000002000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------TG-------------------------------------------GCA-----------------AGTGGCA------------------------------------------------------------------A----------------G----------TGG-.......................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000001000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGA---------GAGAGAGAGAGA----GAG............................................................................................................................................................................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
droGri2
GCGGCAGCAGCAGCAGCGGC---AG---CAGCAGCAGCGGCAGCAGCA---GCAGCAGCGGC-AGCA-----------------GCAGCAG------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCG---------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAGCAGCGCCAGCAG------------CAG---------------------------------------------------------------------------------------------------------------------------------------CGGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCGGCAGC----------------------GGC----------------------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------------------------------------------AGCA----GCAGCGGCAGCAG-------------CAGCA------GCGGC------------------------------------------------AGCGGCAGCAGCAGCATCAGCAGCAGCAAA------AAC------GG-CAGCAC-----TA--------AC-AGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................CAGCAGCA---GCAGCAGCGGC-A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
droWil2
TAACCA-CCGCAGCAACGGC---AACAGCAGCAGCAACAGCAACAGCA---ACAGCAA-------CG-----------------------------CGGCTAGTATTGCTCAAGTGTCG--------------CCCA------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAGA-ACG---------------------------------------------------------------------ACAA-------------------------------------------------------------------------------------------------------------------------------------TTGCT-GGCGTCGCTACCAACAATTCCACTGGCAGCGAACGCAT----------------------------------------------------C---------------------------------------------------------------AGCAATGGACCAATTG---GTGGCGGTGGCG-------------GAGGCGGAGGCGGAGGTGGGGATCAGCA----TA----------------------------GCGCTCTGATGGATGAATTCA----------------AGCGAG--C-------ACACCA----------------------------------------------------------------------------------------------------------------------GCGTATGTT---CA-----GG--------------AACGGGTT-CCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---GTGGCGGTGGCG-------------GAGGCGGAGG.....................................................................................................................................................................................................................................................................................2511.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCG-------------GAGGCGGAGGC....................................................................................................................................................................................................................................................................................1930.33101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTGGCG-------------GAGGCGGA.......................................................................................................................................................................................................................................................................................1860.17101000
....................................ACAGCAACAGCA---ACAGCAA-------CG-----------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................CAGCAGCAGCAACAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
ACAACAGCAGCAGCAGCAGT---GG---CAACAATAGCAGCGGCAACA---GCGACAGTGGC-AACG-----------------------------ATG---------GCAG-----------------------------------------------CCTCACCGGATCCACGGGCAC---------CCTGGATAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------GCAGCAGCGTCAGCAG------------CAAT-------------------------------------GATTC-G------------------------------------------------GGCAAGAGCAGTGCA-GAGGGCGCCGGCGGTGGAGG------------C----------------------------------------------------------GGTGCCAGTGGCAG--------------------------------------------------------------------------------------------------------------------TGGCAGCACCA----------------------GT------------------------GGCG-TGAATGCCTGG-GCCCTGCA-GCAGCA----GCA-----------------------------------------------------------------------------------------------------------------------------------------AC--------------AGACGGCA-GCGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAAT-------------------------------------GATTC-G------------------------------------------------GGCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................CCTCACCGGATCCACGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCA----------------------GT------------------------GGCG-TGAATGCCTGG-GCCCT.......................................................................................................................................................................................2711.0010100000000
.....................................................GACAGTGGC-AACG-----------------------------ATG---------GCAG-----------------------------------------------CCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTGCA-GAGGGCGCCGGCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGAATGCCTGG-GCCCTGCA-GCAGCA----GC.......................................................................................................................................................................2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-GCAGCA----GCA-----------------------------------------------------------------------------------------------------------------------------------------AC--------------AGACGGC......2011.0010100000000
...........................................CAACA---GCGACAGTGGC-AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAAT-------------------------------------GATTC-G------------------------------------------------GGCAAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................GGCAACA---GCGACAGTGGC-AACG-----------------------------ATG---------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........AGCAGCAGT---GG---CAACAATAGCAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................................CAC---------CCTGGATAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................GT---GG---CAACAATAGCAGCGGCAACA---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTGCA-GAGGGCGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTCAGCAG------------CAAT-------------------------------------GATTC-G------------------------------------------------GGCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GCAGCA----GCA-----------------------------------------------------------------------------------------------------------------------------------------AC--------------AGACGGCA-GCGT2411.0010100000000
....................................................................................................................................................................................................AACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------------------------------------GCAGCAGCGTCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCTGG-GCCCTGCA-GCAG...............................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCAG------------CAAT-------------------------------------GATTC-G------------------------------------------------GGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................CGACAGTGGC-AACG-----------------------------ATG---------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GCAGCA----GCA-----------------------------------------------------------------------------------------------------------------------------------------AC--------------AGACGGCA-G...2111.0010100000000
.....................................................GACAGTGGC-AACG-----------------------------ATG---------GCAG-----------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-G------------------------------------------------GGCAAGAGCAGTGCA-GA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
................................................................................................................................................................CTCACCGGATCCACGGGCAC---------CCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCA----------------------GT------------------------GGCG-TGAATGCCT...............................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCTGG-GCCCTGCA-GCAGC..............................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGG------------C----------------------------------------------------------GGTGCCAGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
...ACAGCAGCAGCAGCAGT---GG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCAG--------------------------------------------------------------------------------------------------------------------TGGCAGCACC..............................................................................................................................................................................................................................................................1880.1310100000000
droPer2
TCAGCAGCAGCAGCAGCAGC---AG---CAGCAGCAGCAGCAGTACCA---GCAGCAGCAGG-AGCA-----------------GGAGCAG------------------------------------------------------------------------------------------------------------------------------------------CAGCAGT---------------------------ACCAGAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGC------------------------------------------------------AGCAGTAC---------------------------------------------------------------------------------------------CAGAAGCAGCAGCATCAGCAGCAGCAGCAGCAGTACCAACAGCAGCAGGAGC----------------------AGG----------------------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------------------------------------------AGCA----GCAGTGGGAACAG-------------CAGCA------GCAAC------------------------------------------------GGCAGCGGCAGCAGTACCAGCAGCAGCGGC------AGTG------CC-AGCAG-----CA--------GG-AGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................GCAGCAGCAGCAGTACCA---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
............GCAGCAGC---AG---CAGCAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droAna3
ACAGCGGCAGCAGCATCGGC---AT---CAGCAGCAGCGGCAGCAGTT---GCTGTCATAT---------G-----------------CGTGTGTGC-------------G--------AGG---------------------------------------------------------------------AAA---------------------------------------GGAGTTTGGAGGGGGGAAGGCTGGAG------ATGGAGCTGGGAGGGTGGGTGGTATTTGGGGGGGGTGGTCAATGGGGCTGTCAGACAGATGG--GCAGCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGTTGCATACTTTTAGGC---------------------------------------GCATCG-ATG----CATTT--------------------------------------------------------------------------------------------------TTACAGGGGT------TTG------GG-GACCGT-----TT--------T-TTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................AT---CAGCAGCAGCGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251010000
.......................................................................................................................................................................................................................................................................................GTGGGTGGTATTTGGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.141100000
droBip1
CCAGCAGCAGTTGGACCTGG---AG---CAGCAGCAACAGCAGCAGCA---TCATCATGTGACT--G-------------------------TGGAC-------------G--------AGA---------------------------------------------------------------------TCATTGAGCTGCCCACCTCGACGGCGGGACAGGGACATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----GG---------------ACA------------------------------------------------TG----GACACAG------------------------------------------------CAACAACAAG----------CA-------------------------------------------ACA-----------------G-----------------------------------------------------------------------------------------G----------CGG-CAGCG-------------------GGGGCGA---------CGGGGGGCGGCA----CGATGCTGGGGAATT-------------------------------------------------------------------------------------------------------------------------------------T---ACCGTTG-GGTAAGT----------------------------------------AAT------ATC------GG-TTCCGT----TC---------C-GCATSizeHit CountTotal NormTotal
No Reads
droKik1
GCAGCAGCAGCAGCAGTAGC---AG---CGCCAGCACCAGCAGCAGCA---GCAGCAACGCC-AGCATAGG-----------------CAGCGACGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GCAG------------CAGCATGTCCAAAACAAGCAGCGCAA----ATCCAC-----A----------------------------------------------------------------------AGCATCAGCAGCAGCAGCAGCAACAGC-------------------------------------------------------------------------------------------------------------------------------AGCGCG--------CG---GCAGCAGCAGCAGCAACAGCAGCTG-------------------------------------------------------------------------------------------------------------CAGCA-GCGGCTG---------------------------------------------CAAA-----TGCA----ACAAATGCCGCCGATTTTAG---------------------------------------------------------TGCTTTCGATT-TTAACGATA-GCTCSizeHit CountTotal NormTotal
No Reads
droFic1
GCAACAGCAGCTGCAACAGC---AA---TTGCAGCAGCAGCAGCAACA---GCAGCCGT------CG--CCCA----------------------------------------------------------------------------------------------------------TGTTGGGCAGACCA-GCG----GCAC-CCTCCGCGGAGATGCAGCGATATGTGCAGAGGATGCAACAGC-------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAACAGCAGCAG-----------CAGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGAGTTGTACCG---CCAGCAACAGCAGCAGCAGCAGCTG-------------------------------------------------------------------------------------------------------------CAGCA-GCAACA-TCG----CACCAG-------------CATGA------------------------------------------------------------------------------------GCGGC------ATTG------CCAGCCAG-----CA--------GC-ACTSizeHit CountTotal NormTotal
No Reads
droEle1
ACAACAGCAGCAGGAACACC---AT-CGCAGCAGCAACAGCAGCAGCA---------A---GCTGCG--CCT----------------TCAGTTTTG------------------------------------CAACAGCATTTGG--------------GTCACCTGAATTAC------------------------------------------------------------------GAAAGTGG-----AGCAAC-------TGCAGC-----------------------------------------------------------------AGCAGCAGCAACCAGTAGAAGT----------GGCTCGGCAACACTGGCGC----AGCATTT----------------------------------------------------------------------------------------------GGC------AACACC------------------------------------------------CAGCAACATA----------TT-------------------------------------------GCA-----------------GGCGGCA------------------------------------------------------------------T----------------T----------C---------------------------------------------------GG-----------------------------------------------------------------------------------CAGCA-GCAACTT--------------------------------------------------GCAACACAT---ACTAACGCGGTCCGCCCCCT---------------------------------------------------------CGCCCTCGTCCTCCAACA-----ACTSizeHit CountTotal NormTotal
No Reads
droRho1
A--ACAGCAGCAGCAACAGCAGTCC---GTGCAGCAGGCGCAGCAGCA---GCAGCAG---ATCACG--CCCGGTCTGGTGGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGT----GGCTCCCTGAAAC------------------------------------------------------------------------------------------------------------------------------------------------------TGGAACCGCAGC------------------------------------------------------AGATGGAT---------------------------------------------------------------------------------------------TTTTACTCGCAGCGATTGCGT----------------------------------------------------C---------------------------------------------------------------AGCTT--------------GCGGGCACAACA-----------------------------------------------------------------------------------------------AGCCCTG---------G-------------------------------A--------------------------------------------------GCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCTCGACAGAAGCAATCGCCGCACTTCG------CGAGCCCCT----CGCCC-----TC--------GC-AGCSizeHit CountTotal NormTotal
No Reads
droBia1
GCAACAGCAGCAGGGTGTGC---AG---CAGGCGCAGCAGCAGCAGCAGCAGCAGCAG---ATCACA--CCTGGTCTGGTGGGCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGT----GGCTCGCTGAAGC------------------------------------------------------------------------------------------------------------------------------------------------------TGGAACCGCAGC------------------------------------------------------AGATGGAT---------------------------------------------------------------------------------------------TTTTACTCGCAGCGATTGCGT----------------------------------------------------C---------------------------------------------------------------AGCTT--------------GCGGGCACAACA-----------------------------------------------------------------------------------------------AGCCCTG---------G-------------------------------A--------------------------------------------------GCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCTCGACAGAAGCAATCGCCGCACTTCG------CGAGCCCCT----CGCCC-----TC--------GC-AGCSizeHit CountTotal NormTotal
No Reads
droTak1
CTGGCAGCAGCAACAGCAGC---AG---CAGCAGCAACAACAGCAGCAGCAACAGCAA---TCC-CT-----------------G-------GCTG---------CCG-----------AGGGTTATGCC--------------------------------TC----C------------------------------------------------------------------------CAGGGCGAGCGACTGCAT-----------------------------------------------------------------------------------------CT----------------AAA-------------------------------------------------------CACCCGCA------------------------------------------------------TCAAGTCGAT-----GATTATG------------------------------------------------CGTAAGAGCGATCCCAAGGATCCGCCGCCGGACTTGCAGCAGCAACCTGTGCAGGTGCAACAGCAGCAGCAACAGTCGGCGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA-GCAACA-ACA----GACCGGTCATTTTTTATCGTATAGCCACCATCTCCGGC-C-----------------------------------------------------------------------------------------CG--------------AAGCGG-C-GCTGSizeHit CountTotal NormTotal
No Reads
droEug1
GCAGCAGCAGCTGCAGTAGC---AG---CAGCAGCAGCAGCAACGCTA---GCGTCGGCAGC-GACG-----------------------------CCA---------------------------------------------------------------------------------------------------------------------------G------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGTCCAAAACAAGCAGCGGGAA---------TCCGAG----T---------------------------------------------------------------------------------------------------GCAGCAGCAACACAAGCAGCAGCAGCAGCCGCTG-------------------------------------------------------------------------------------------------------------CAGCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------GCA----G-------------------------------------CAAGTGCAACAAATGCCGCCAATGCCGCCGATTTCAG---------------------------------------------------------TGCGTTCGACT-TTAACGATA-GTTCSizeHit CountTotal NormTotal
No Reads
dm3
CCAGCAGCAGCAGCAGCAGC---AG---CAGCAGGACCAGTCGCAGCA---GCAGCCGCATC-AGCA-----------------------------------------GTTG-----------------------------------------------CCCTA----C------------------------------------------------------------------------CA-GCAACGCGGCTACTA-----------------------------------------------------------------------------------------CGCACTGA-ACGGCAGCT----------TGGAGCTAGATTGCGACACCAGCAAC--------------------ACGAACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAACAT----------------------------------------------------T---------------------------------------------------------------GGCTA--------------CCAGCAACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGCA---------------------------------------------------------ACCGCCGTTGATCCTGTCG------------------------------------------------CAG---GC-----TC--------------TGCTGTCG-CCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................AGATTGCGACACCAGCAAC--------------------ACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CACTGA-ACGGCAGCT----------TGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TG-----------------------------------------------CCCTA----C------------------------------------------------------------------------CA-GCAACGCGGCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAACACCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTGCGACACCAGCAAC--------------------ACGAACAGCAGC------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................TA-----------------------------------------------------------------------------------------CGCACTGA-ACGGCAGCT----------TGGAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TA-----------------------------------------------------------------------------------------CGCACTGA-ACGGCAGCT----------TGGAGCTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-AC..........................................................................................................................................................................2680.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CA---GCAGCCGCATC-AGCA-----------------------------------------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGCA---------------------------------------------------------ACCG.........................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................GCAGCCGCATC-AGCA-----------------------------------------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACA.........................................................................................................................................................................19200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGC.......................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
..........................................GCAGCA---GCAGCCGCATC-AGCA-----------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAGCAGCAGCAGCAGC---AG---CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
..AGCAGCAGCAGCAGCAGC---AG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGCA---------------------------------------------------------AC...........................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-............................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-AC..........................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CA................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCAGCAGCAGC---AG---CAGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACCAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGC.......................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAGCAGCAGCAGCAGC---AG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-............................................................................................................................................................................24140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACACCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GACACCAGCAAC--------------------ACGAACGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACACCAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACACCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGC..............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....CAGCAGCAGCAGCAGC---AG---CAGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCAGCAGCAGCAGCAGCAGC---AG---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...GCAGCAGCAGCAGCAGC---AG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCAGCAGCAGCAGCAGCAGC---AG---CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CAGCAGCAGC---AG---CAGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...GCAGCAGCAGCAGCAGC---AG---CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-ACAGCA---------------------------------------------------------.............................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCAGCAGCAGCAGCAGC---AG---CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACACCAGCAGCAGC....................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCAGCAGCAGCAGCAGCAGC---AG---CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAG...............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------ACGAACAGCAGC------------------------------------------------------AGC---------------------------------------------------------------------------------------------AG------------CTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCAGCAGCAGCAGC---AG---CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CAGCA-............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAGCAGCAGCAG-------------------------------------------------------------------------------------------------------------CA................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
C-AGCAACATCAGCAGCAC---------CAACAACACCAGCAGCATCA---GCAGCAGGGTG-GTGGTGGG-----------------CCTGTCTCC------------------------------------CAGCAGCAAATGG---------------------------------TGCCGGTCAGTGTG-GCG----GC--------------------------------------------------------------------------------------------------------------TGCCTTCCAGGTGGCTGCAGCCAATGCCGCTGCTGCCAATGGAAACGGAGGCT----------CAACGCTGGATCCCAATGCTAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------------------------A--C-------ACG----------------------------------------------------------------------------------------------------------------------CCGAAGAATGGC---AA-----CA--------------TGATGGTG-GTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................GCAAATGG---------------------------------TGCCGGTCAGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................CAGGGTG-GTGGTGGG-----------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAATGGC---AA-----CA--------------TGATGGTG-GT..2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................CCAATGCTAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------------------------A--C-------ACG----------------------------------------------------------------------------------------------------------------------...................................................2011.00100000000001000000
...........AGCAGCAC---------CAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16160.06100000000001000000
..............................ACAACACCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
droSec2
TCCACATCAGCGGCAGCAGC---AG---CAGCAGCATGAGCAAGAGCA---GCAGCATCTGG-GT-T-----------------------------------------------------------TCGAT----TCAAA---GTCAACGACTTCCGTTCCGTGCCAAAGCCG-------------------------------------------------G------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGCCCCAAGCAAATTACTTAATTAAATGGAC-----A--------------------------------------------------------ATTA--------------AC-------------------------------------ACCCGAGCA-----------------GGAGGAACCGGGGCGGGATGG-GGGGCCAAAGGCCATGGGAGGATGGATAGGATGGCCGGAATGGCAGAGGCAGAGGGCAGGAAGAA-T---------------------------------------------------------------GAGTA--------------------------------------------------------------------------------ATGTGA---------------------------------------------------GC-AAG-----------------------------------------------------------------AGTAA--------------------------------------AAA-TTTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......CAGCGGCAGCAGC---AG---CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
GCAGCAGCGGCAGCAGCAGC---AG---CAGCAGCAACAGCAGCAGCC---GCATCAGCACT-GA-----A-----------------TT------------------------------------TGCATAAAGGCAAA------------------------------------------------------------------------------------------------------------GGAGGGTCAGG-----------------------------------------------------------------------------------------TG----------------AAAGG-------------------------------------------------------GGGCAA---------CCAACTGCTCTGCTGGTGTCATGGTGCCCA-AAAAACCAGACAAAC---------GCCAAG----TGCACAGCATGGCAAACGAGGAAGGAGCCCCAGTCGCGCTGCCCATGATGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATG---------------------------------------------------------------------------------------------------------------------------------------------------------------GAC---GT-----GT--------------TGCTGGTG-GCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........CAGCAGCAGC---AG---CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20400400000000
GCAGCAGCGGCAGCAGCAGC---AG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.07101000000000
.................AGC---AG---CAGCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
ACAGCAGCAGCAGCAGCAAC---AA---CAACAGCAGCAGCAACAGCA---------A---TCGATG--GGTGATC-------------------------------------------------------------------------------------------------------------------CTGCTGATCAT--------------------------------------GCAACATC-------------------------------------------------------------------------------------------------------------------------------------------------------GACGTCAGCGGGAGCAGCAACAT-----TG---------------GCGG------------GAT-----------------CCT----------------------------------------------------CCATTTACGGTGCAGACGATGCA-------GGTGCG-GGTGTTGCTAGTGGCGGTGT------------TGGTGT----------------------------------------------------------TGGTGGTA-----------------------------------------------------T---------------------------------------------------------------TAGCAGTGCGA----------------------TT------------------------AGCGGTG---------G-------------------------------A--------------------------------------------------TTTGGTGGTGCGGCTGAG------------------------------------------------------------------------CC--------GC-AACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCA-------GGTGCG-GGTGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
.......................................GCAACAGCA---------A---TCGATG--GGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.................AAC---AA---CAACAGCAGCAGCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0910100000
.........GCAGCAGCAAC---AA---CAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
ACAGCAGCAGCAGCAGCAAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
................CAAC---AA---CAACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000

Generated: 05/18/2015 at 12:31 AM