ID:

dmo_1415

 Coordinate:

scaffold_6498:3160868-3161018 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.0 -26.0 -26.0

Flybase annnotation

CDS [Dmoj\GI14144-cds]; exon [dmoj_GLEANR_14279:1]; intron [Dmoj\GI14144-in]; Antisense to intron [Dmoj\GI14008-in]

Repeatable elements

NameClassFamilyStrand
Gypsy4-I_Dmoj-intLTRGypsy+
Gypsy4-LTR_DmojLTRGypsy+
mature
  1. scaffold_4138:2726-2747 +
  2. scaffold_4161:3686-3707 -
  3. scaffold_4161:8113-8134 +
  4. scaffold_6093:790-811 -
  5. scaffold_6264:5065-5086 -
  6. scaffold_6318:82324-82345 +
  7. scaffold_6439:64347-64368 -
  8. scaffold_6482:248221-248242 -
  9. scaffold_6498:2083236-2083257 +
  10. scaffold_6498:2456956-2456977 +
  11. scaffold_6498:3136114-3136135 +
  12. dmo_1415  scaffold_6498:3160991-3161012 +
  13. scaffold_6540:684453-684474 +
  14. scaffold_6541:662406-662427 -
  15. scaffold_6541:670443-670464 -
star
  1. scaffold_6498:3136047-3136072 +
  2. dmo_1415  scaffold_6498:3160924-3160949 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATAAACGTGACGGTCGCACCTTCGGGAAGCGTGACCATCGCTCTACAAAGTAAGGGGGGGGGGGGGAGGGGTTGTAAGGCGGCTCGATGAGCCACCTCACATAAGTCGTTTTCAAACGCCCGCGCAAGTCGCAGCGATCGGCAATGCAACCATGGTTTCGACTTTCGCGGCGAAAAGTTCAAAGGGCCCGAAGCTGTGGTGAGTTGCATTGCCGACGCCGAAGCGGAGCGCGCGGCCGAGGTGTGGAGGC
**********************************************************************************************************...........((.(((((.((((((.(((.((.((........)))).))).)))))).)))))))......................******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
 V049
head
 V041
embryo
.ATAAACGTGACGGTCGCACCTTC................................................................................................................................................................................................................................... 23 0 5 4.00 20 15 2 3 0 0 0
..................................................................................................................................................................................................CTGCGGTGATTTGCATTGTCG.................................... 21 3 14 3.79 53 10 34 0 6 3 0
.ATAAACGTGACGGTCGCACCTT.................................................................................................................................................................................................................................... 22 0 5 2.00 10 9 0 1 0 0 0
.ATAAACGTGACGGTCGCACCTTCG.................................................................................................................................................................................................................................. 24 0 5 2.00 10 10 0 0 0 0 0
.ATAAACGTGACGGTCGCACCTTCGG................................................................................................................................................................................................................................. 25 0 5 1.60 8 8 0 0 0 0 0
.ATAAACGTGACGGTCGCACCTTCGGGA............................................................................................................................................................................................................................... 27 0 5 1.40 7 6 1 0 0 0 0
.ATAAACGTGACGGTCGCACCTTCGGG................................................................................................................................................................................................................................ 26 0 5 1.20 6 6 0 0 0 0 0
.ATAAACGTGACGGTCGCACC...................................................................................................................................................................................................................................... 20 0 5 1.00 5 4 0 1 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGC........................................................ 22 0 15 0.67 10 6 1 0 1 0 2
..........................................................................................................TCGTTTTCAAACGCCCGCGCAAGTCG....................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................TCGTTTTCAAACGCCCGCGCAAGTCGCAG.................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCT....................................................... 23 0 15 0.47 7 6 0 1 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTG...................................................... 24 0 15 0.47 7 6 1 0 0 0 0
.ATAAACGTGACGGTCGCACCT..................................................................................................................................................................................................................................... 21 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................................................................................................................AAGCTTTGGTAAGTTGTATTG....................................... 21 3 20 0.35 7 2 4 0 0 1 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTGG................................................... 27 0 15 0.33 5 5 0 0 0 0 0
..................................................................................................................................................................................................CTGCGGTGATTTGCATTGTC..................................... 20 3 20 0.30 6 5 1 0 0 0 0
...............................................................................................................................................................................................AAGCTTTGGTAAGTTGTATT........................................ 20 3 20 0.25 5 5 0 0 0 0 0
....................................CATCGCTCTACAAAGTAAGGG.................................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
.ATAAACGTGACGGTCGCACCTTCGGT................................................................................................................................................................................................................................ 26 1 5 0.20 1 1 0 0 0 0 0
.ATAAACGTGACGGTCGCACCTTCGGC................................................................................................................................................................................................................................ 26 1 5 0.20 1 1 0 0 0 0 0
..TAAACGTGACGGTCGCACCTTT................................................................................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0
..TAAACGTGACGGTCGCACCTTCG.................................................................................................................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0
.AGAAACGTGACGGTCGCACCT..................................................................................................................................................................................................................................... 21 1 5 0.20 1 0 0 1 0 0 0
..TAAACGTGACGGTCGCACCTTCGG................................................................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0
.AGAGACGTGACGGTCGCACCTTC................................................................................................................................................................................................................................... 23 2 5 0.20 1 0 0 1 0 0 0
.ATAAACGTGACGGCCGCACCTT.................................................................................................................................................................................................................................... 22 1 5 0.20 1 0 0 1 0 0 0
.ATAAACGTGACGGTCGCACCTTCGGGAT.............................................................................................................................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCGA............................. 23 0 12 0.17 2 2 0 0 0 0 0
....................................................................................TCGATGAGCCAGCTCACATAAGTCGTTA........................................................................................................................................... 28 2 7 0.14 1 1 0 0 0 0 0
........................................................................................TGAGCCACCTCACATAAGTCGTTTTCAAA...................................................................................................................................... 29 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................CCGAAGCGGAGCGCGCGGCCG............ 21 0 14 0.14 2 1 1 0 0 0 0
....................................................................................TCGATGAGCCACCTCACATAAGTCG.............................................................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0
.......................................................GGGGGTGGGAGGAGGGGTTG................................................................................................................................................................................ 20 2 7 0.14 1 0 0 0 1 0 0
.............................................................GGAGGGAGGAGTTGTAAGGG.......................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 1 0 0
.............................................................GGAGGGAGGAGTTGAAAGGC.......................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 1 0 0
...........................................................................................................................................................................................................GTTGCATTGCCGACGCCGAAGCGGAG...................... 26 0 9 0.11 1 1 0 0 0 0 0
............................................................................................................................................................................................................TGGCATTGCCGACGCCGAAGCGGAGT..................... 26 2 9 0.11 1 0 0 1 0 0 0
......................TCGGGAAGCGTGACCATCGCTC............................................................................................................................................................................................................... 22 0 9 0.11 1 0 0 0 0 0 1
...............................................................................................................................AGTCGCAGCGATCGGCAATGC....................................................................................................... 21 0 19 0.11 2 0 0 2 0 0 0
.......................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCGAAG........................... 25 0 10 0.10 1 0 0 1 0 0 0
....................................................................................TCGATGAGCCACCTCACATAAG................................................................................................................................................. 22 0 11 0.09 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TTGCCGACGCCGAAGCGGAGCG.................... 22 0 11 0.09 1 1 0 0 0 0 0
......................................................................................................................................................CCATGGTTTCGACTTTCGCGGCG.............................................................................. 23 0 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCG.............................. 22 0 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCC............................... 21 0 13 0.08 1 1 0 0 0 0 0
.....................................................................................CGATGAGCCACCTCACATAAG................................................................................................................................................. 21 0 13 0.08 1 1 0 0 0 0 0
........................................................................................................................................................ATCGTTTCGACTTTCGCGGCG.............................................................................. 21 1 13 0.08 1 1 0 0 0 0 0
............................................................................................................................................................................GAAAAGTTCAAAGGGCCCGAAGCTG...................................................... 25 0 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................GAAAAGTTCAAAGGGCCCGAAGC........................................................ 23 0 15 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................CGCGGCCGAGGTGTGGAGGC 20 0 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTT.................................................... 26 1 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................AAAGTTCAAAGGGCCCGAAGC........................................................ 21 0 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCG............................................................ 18 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................GTTCAAAGGGCCCGAAGCTC...................................................... 20 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................CAAAAGTTCAAAGGGCCCGAAGCT....................................................... 24 1 15 0.07 1 0 0 1 0 0 0
.............................................................................................................................................................................AGAAGTTCAAAGGGCCCGAAGCT....................................................... 23 1 15 0.07 1 0 0 1 0 0 0
.............................................................................................................................................................................AAATGTTCAAAGGGCCCGAAG......................................................... 21 1 15 0.07 1 0 0 1 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTC.................................................... 26 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................AAAAGTTCAAAGGGCCCGAA.......................................................... 20 0 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GGCGAAAAGTTCAAAGGGCCC............................................................. 21 0 15 0.07 1 0 0 1 0 0 0
...................................................................................................................................................................................TCAATGAGCCCGAAGCTGTAG................................................... 21 3 17 0.06 1 1 0 0 0 0 0
...............................................................................................................................................................................................AAGCTTTGGTAAGTTGCATT........................................ 20 2 17 0.06 1 1 0 0 0 0 0
........................................................................................................................CCGCGCAAGTCGCAGCGAT................................................................................................................ 19 0 18 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................AAAGGGCCGGAGGCTGTG.................................................... 18 2 19 0.05 1 1 0 0 0 0 0
.......................................................GTGGGCGGGGGGAGGGGTT................................................................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................AAGGGGAGCGCGTGGCCGGGG......... 21 3 20 0.05 1 0 0 0 0 1 0
......................................................................................................................................................................................................................................GCTGGGCCGAGGTGTGGAT.. 19 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TTATTTGCACTGCCAGCGTGGAAGCCCTTCGCACTGGTAGCGAGATGTTTCATTCCCCCCCCCCCCCTCCCCAACATTCCGCCGAGCTACTCGGTGGAGTGTATTCAGCAAAAGTTTGCGGGCGCGTTCAGCGTCGCTAGCCGTTACGTTGGTACCAAAGCTGAAAGCGCCGCTTTTCAAGTTTCCCGGGCTTCGACACCACTCAACGTAACGGCTGCGGCTTCGCCTCGCGCGCCGGCTCCACACCTCCG
********************************************************...........((.(((((.((((((.(((.((.((........)))).))).)))))).)))))))......................********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
 V049
head
...........................................................................................CGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 25 0 7 8.57 60 36 16 7 1 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 24 0 7 6.71 47 38 2 6 1 0 0
............................................................................................................................................................AAAGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 27 0 14 4.57 64 64 0 0 0 0 0
..............................................................................................TGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 22 0 7 3.29 23 10 8 1 4 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTCAACGT.......................................... 25 0 15 2.33 35 19 16 0 0 0 0
.............................................................................................................................GTTCAGCGTCGCTAGCCGTTACGTT..................................................................................................... 25 0 19 2.16 41 39 0 1 1 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTACC............................................................................................... 25 0 14 1.79 25 12 13 0 0 0 0
.............................................................................................GTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 23 0 7 1.57 11 8 2 1 0 0 0
..........................................................................................TCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 26 0 7 1.57 11 2 6 0 3 0 0
...............................................................................................GGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 21 0 7 1.14 8 6 1 1 0 0 0
......................................................................................................................................................................................TTCCCGGGCTTCGACACCACTCAACGT.......................................... 27 0 15 1.13 17 15 2 0 0 0 0
.......................................................................................................................................................................................TCCCGGGCTTCGACACCACTCAACGT.......................................... 26 0 15 1.07 16 12 4 0 0 0 0
.............................................................................................................................GTTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 24 0 19 1.00 19 19 0 0 0 0 0
.........................................................................................................................................................................................CCGGGCTTCGACACCACTCAACGT.......................................... 24 0 15 0.87 13 6 7 0 0 0 0
..............................................................................................CGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 22 1 7 0.86 6 0 6 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAAGT........................................................................................................................................ 23 0 7 0.86 6 6 0 0 0 0 0
......................................................................................................................................................................................................................CTGCGGCTTCGCCTCGCGCGCCGGCT........... 26 0 13 0.69 9 5 4 0 0 0 0
..........................................................................................................................................................................................CGGGCTTCGACACCACTCAACGT.......................................... 23 0 15 0.67 10 6 4 0 0 0 0
.............................................................................................................................................................AAGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 26 0 14 0.64 9 9 0 0 0 0 0
...........................................................................................................................................................................................GGGCTTCGACACCACTCAACGT.......................................... 22 0 15 0.60 9 7 2 0 0 0 0
.........................................................................................CTCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 27 0 7 0.57 4 4 0 0 0 0 0
...........................................................................................................................................................................................................CAACGTAACGGCTGCGGCTTCGCCT....................... 25 0 9 0.56 5 3 2 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGGT.................................................................................................. 25 0 15 0.53 8 2 3 3 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 25 0 19 0.53 10 10 0 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTACCA.............................................................................................. 26 0 14 0.50 7 4 3 0 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGTTACGTT..................................................................................................... 26 0 19 0.47 9 7 2 0 0 0 0
...............................................................................................................................TCAGCGTCGCTAGCCGTTACGTT..................................................................................................... 23 0 19 0.47 9 4 5 0 0 0 0
.....................................................................................................................................................................................................................GCTGCGGCTTCGCCTCGCGCGCCGGCT........... 27 0 13 0.46 6 6 0 0 0 0 0
................................................................................................GAGTGTATTCAGCAAAAGTT....................................................................................................................................... 20 0 7 0.43 3 3 0 0 0 0 0
....................................................................................................................................GTCGCTAGCCGTTACGTTGGTACC............................................................................................... 24 0 14 0.43 6 4 0 2 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGGTACC............................................................................................... 28 0 14 0.43 6 2 4 0 0 0 0
..................................................................................................................................................................................................GACGCCACTAAACGTAACAGC.................................... 21 3 14 0.43 6 6 0 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAAAGT........................................................................................................................................ 24 0 7 0.43 3 2 1 0 0 0 0
...............................................................................................................................................................................................TTCGAAACCATTCAACATAAC....................................... 21 3 20 0.40 8 8 0 0 0 0 0
......GCACTGCCAGCGTGGAAGCCCTTCGC........................................................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0
.........CTGCCAGCGTGGAAGCCCTTCGCACTG....................................................................................................................................................................................................................... 27 0 5 0.40 2 1 1 0 0 0 0
......................................................................................................................................................................................CTCCCGGGCTTCGACACCACTCAACGT.......................................... 27 1 15 0.33 5 5 0 0 0 0 0
.......................................................................................................................................................................................................CACTCAACGTAACGGCTGCGGCTTCGCCT....................... 29 0 9 0.33 3 3 0 0 0 0 0
...........GCCAGCGTGGAAGCCCTTCGCACT........................................................................................................................................................................................................................ 24 0 6 0.33 2 1 1 0 0 0 0
........................................................................................................................GGCGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 25 0 17 0.29 5 4 1 0 0 0 0
......................................................................................................................CGGGCGCGTTCAGCGTCGCTAGCCGT........................................................................................................... 26 0 17 0.29 5 4 0 1 0 0 0
........................................................................................................................GGCGCGTTCAGCGTCGCTAGCCGT........................................................................................................... 24 0 17 0.29 5 5 0 0 0 0 0
...........................................................................................CGGCGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 25 1 7 0.29 2 1 0 1 0 0 0
..........................................................................................CCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 26 1 7 0.29 2 0 2 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAAAGGT....................................................................................................................................... 25 1 7 0.29 2 0 2 0 0 0 0
............................................................................................................................................................AAAGCTGAAAGCGCCGCTTTTCAAGT..................................................................... 26 0 14 0.29 4 4 0 0 0 0 0
..............................................................................................................................................................AGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 25 0 14 0.29 4 4 0 0 0 0 0
...............................................................................................GGAGTGTATTCAGCAAAAGT........................................................................................................................................ 20 0 7 0.29 2 2 0 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAATGTT....................................................................................................................................... 25 1 7 0.29 2 0 2 0 0 0 0
.............................................................................................................................................................AAGCTGAAAGCGCCGCTTTTCAAGT..................................................................... 25 0 14 0.29 4 4 0 0 0 0 0
......................................................................................................................................................................................TTCCCGGGCTTCGACACCACTCAAC............................................ 25 0 15 0.27 4 3 1 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTAC................................................................................................ 24 0 15 0.27 4 2 2 0 0 0 0
.................................................................................................................................AGCGTCGCTAGCCGTTACGTTGGTAC................................................................................................ 26 0 15 0.27 4 4 0 0 0 0 0
....................................................................................................................................................................................................................GGCTGCGGCTTCGCCTCGCGCGCCGGCT........... 28 0 12 0.25 3 3 0 0 0 0 0
..............................GCACTGGTAGCGAGATGTTTCATT..................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
.....................................................................................................................................CCGCTAGCCGTTACGTTGGTACCAA............................................................................................. 25 1 16 0.25 4 0 4 0 0 0 0
............................................................................................................................................................................................GGCTTCGACACCACTCAACGT.......................................... 21 0 16 0.25 4 4 0 0 0 0 0
...........................................................................................................................................................CAAAGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 28 0 13 0.23 3 2 1 0 0 0 0
..........................................................................................................................................................CCAAAGCTGAAAGCGCCGCTTTTCAAGT..................................................................... 28 0 13 0.23 3 2 1 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGGTACCA.............................................................................................. 29 0 14 0.21 3 3 0 0 0 0 0
...............................................................................................................................................................GCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 24 0 14 0.21 3 2 1 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTACCAAA............................................................................................ 28 0 14 0.21 3 1 2 0 0 0 0
......................................................................................................................................CGCTAGCCGTTACGTTGGTACCAAA............................................................................................ 25 0 14 0.21 3 3 0 0 0 0 0
...............................................................................................................................CCAGCGTCGCTAGCCGTTACGTT..................................................................................................... 23 1 19 0.21 4 0 4 0 0 0 0
.....TGCACTGCCAGCGTGGAAGCCCTTCGC........................................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
......................CGCCCTTCGCACTGGTAGCGAGATGTT.......................................................................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0 0
....TTGCACTGCCAGCGTGGAAGCCCTTCGC........................................................................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTCAACTT.......................................... 25 1 15 0.20 3 0 3 0 0 0 0
.......................................................................................................................................................................................CCCCGGGCTTCGACACCACTCAACGT.......................................... 26 1 15 0.20 3 0 3 0 0 0 0
........................AACTTCGCACTGGTAGCGAGATGTT.......................................................................................................................................................................................................... 25 2 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................TCAGCGTCGCTAGCCGTTACGTTGGT.................................................................................................. 26 0 15 0.20 3 2 1 0 0 0 0
.......................................................................................................................GGGCGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 26 0 17 0.18 3 2 0 1 0 0 0
...................................................................................................................................................................................................................CGGCTGCGGCTTCGCCTCGCGCGCCGGCT........... 29 0 12 0.17 2 0 2 0 0 0 0
...........GCCAGCGTGGAAGCCCTTC............................................................................................................................................................................................................................. 19 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGTTACG....................................................................................................... 24 0 19 0.16 3 3 0 0 0 0 0
..............................................................................................................................TTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 23 0 19 0.16 3 3 0 0 0 0 0
......................................................................................................................................CGCTAGCCGTTACGTTGGTACCAA............................................................................................. 24 0 14 0.14 2 2 0 0 0 0 0
............................................................................................GGTGGAGTGTATACAGCAAAAGTT....................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................TCGCTAGCCGTTACGTTGGTACCAA............................................................................................. 25 0 14 0.14 2 2 0 0 0 0 0
.....................................................................................................................................TCGCTAGCCGTTACGTTGGTACC............................................................................................... 23 0 14 0.14 2 1 1 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAAAG......................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0
........................................................................................ACTCGGTGGAGTGTATTCAGCAAAAGT........................................................................................................................................ 27 0 7 0.14 1 1 0 0 0 0 0
.........................................................................................TTCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 27 1 7 0.14 1 0 1 0 0 0 0
...........................................................................................CGGTGGAGTGTATGCAGCAAAAGTT....................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
.........................................................................................CGCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 27 1 7 0.14 1 0 1 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAAGGT....................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAAACTT....................................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAGAAGTT....................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
.........................................................................................CTCGGAGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 27 1 7 0.14 1 0 1 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAACTT....................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
..........................................................................................CCGGTTGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 26 2 7 0.14 1 0 1 0 0 0 0
................................................................................................GAGTGTATTCAGCAAAAGT........................................................................................................................................ 19 0 7 0.14 1 1 0 0 0 0 0
.........................................................................................CTCGGTGGAGTGTATTCAGCAAAAGTTT...................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0
........................................................................................AGCTGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 28 3 7 0.14 1 1 0 0 0 0 0
..............................................................................................TGGAGTGTATTCAACAAAAGTT....................................................................................................................................... 22 1 7 0.14 1 0 1 0 0 0 0
.........................................................................................CTCGGTGGAGTGTATTCAGCAAAAGGT....................................................................................................................................... 27 1 7 0.14 1 0 1 0 0 0 0
...........................................................................................................................................................AAAAGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 28 1 14 0.14 2 2 0 0 0 0 0
...........................................................................................AGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
............................................................................................................................................................AAAGCTGAAAACGCCGCTTTTCAAGTT.................................................................... 27 1 14 0.14 2 2 0 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAAG......................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0
............................................................................................GGTGGAGTGTATTCAGCAAAAGTGC...................................................................................................................................... 25 2 7 0.14 1 0 1 0 0 0 0
...............................................................................................GGATTGTATTCAGCAAAAGTT....................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0
.............................................................................................GTGGAGTGTATTCAGCAAAAGT........................................................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTCCC............................................................................................... 25 1 14 0.14 2 0 2 0 0 0 0
........................................................................................ACTCGGTGGAGTGTATTCAGCAAAAGTT....................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................TCGGTGGAGTGTATTCAGCAAAAGT........................................................................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................................................................CCTCCCGGGCTTCGACACCACTCAACGT.......................................... 28 2 15 0.13 2 2 0 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGGTA................................................................................................. 26 0 15 0.13 2 2 0 0 0 0 0
.........................................................................................................................................................................................CCGGGCTTCGACACCACTCAACTT.......................................... 24 1 15 0.13 2 0 2 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGGTAC................................................................................................ 27 0 15 0.13 2 2 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTCAAC............................................ 23 0 15 0.13 2 2 0 0 0 0 0
.........................................................................................CTCGGTGGAGTGTATTCAGCAAAAAGTT...................................................................................................................................... 28 2 8 0.13 1 0 1 0 0 0 0
...........................................................................................CGGTGGAGTGTATTCAGCAAA........................................................................................................................................... 21 0 8 0.13 1 0 1 0 0 0 0
......................................................................................................................CGGGCGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 27 0 17 0.12 2 2 0 0 0 0 0
........................................................................................................................................................................................................ACTCAACGTAACGGCTGCGGCTTCGCCT....................... 28 0 9 0.11 1 1 0 0 0 0 0
.........................................................................................................................................................................................................CTCAACGTAACGGCTGCGGCTTCGCCTC...................... 28 0 9 0.11 1 1 0 0 0 0 0
........................CCCTTCGCACTGGTAGCGATA.............................................................................................................................................................................................................. 21 1 9 0.11 1 0 1 0 0 0 0
.............................................................................................................................................................................................................ACGTAACGGCTGCGGCTTCGCCT....................... 23 0 9 0.11 1 0 0 1 0 0 0
...............................................................................................................................................................................................................GTAACGGCTGCGGCTTCGCCT....................... 21 0 9 0.11 1 1 0 0 0 0 0
.........................................................................................................................................................................................................CTCAACGTAACGGCTGCGGCTTCGCCT....................... 27 0 9 0.11 1 1 0 0 0 0 0
..........................................................................................................................................................................................................TCAACGTAACGGCTGCGGCTTCGCCT....................... 26 0 9 0.11 1 0 1 0 0 0 0
.............................................................................................................................GTTCAGCGTCGCTAGCCGTTACG....................................................................................................... 23 0 19 0.11 2 2 0 0 0 0 0
.........................................................................................................................GCGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 24 0 19 0.11 2 2 0 0 0 0 0
...............................................................................................................................TCAGCGTCGCTAGCCGTTACGGT..................................................................................................... 23 1 19 0.11 2 0 2 0 0 0 0
...........................................................................................................................................................................................................CAACGTAACGGCTGCGGCTT............................ 20 0 10 0.10 1 0 1 0 0 0 0
..............................................................................................TGGGGTGTATTAAGCAAAA.......................................................................................................................................... 19 2 10 0.10 1 0 0 0 0 1 0
................................................................................................................................................................................................................TAACGGCTGCGGCTTCGCCTC...................... 21 0 11 0.09 1 1 0 0 0 0 0
............................................................................................................................................................................................................................CTTCGCCTCGCGCGCCGGCTCCACAC..... 26 0 12 0.08 1 1 0 0 0 0 0
..................................................................................................................................................CGTTGGTACCAAAGCTGAAAGCGCC................................................................................ 25 0 12 0.08 1 0 0 1 0 0 0
....................................................................................................................................................................................................................TGCTGCGGCTTCGCCTCGCGCGCCGGCT........... 28 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................GCTAGCCGTTACGTTGGTACCAAAG........................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TTCGCCTCGCGCGCCGGCTCCACACCT... 27 0 13 0.08 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................TCGCCTCGCGCGCCGGCTCCACACCT... 26 0 13 0.08 1 1 0 0 0 0 0
.........................................................................................................................................................ACCAAAGCTGAAAGCGCCGCTTTTCAAGT..................................................................... 29 0 13 0.08 1 1 0 0 0 0 0
.........................................................................................CTCGGTGGAGTGTATTCAG............................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0
..........................................................................................TCGGTGGAGTGTATTCAG............................................................................................................................................... 18 0 13 0.08 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................CCGCCTCGCGCGCCGGCTCCACACCT... 26 1 14 0.07 1 0 1 0 0 0 0
...............................................................................................................................ACAGCGTCGCTAGCCGTTACGTTGGTACC............................................................................................... 29 1 14 0.07 1 0 1 0 0 0 0
................................................................................................................................CCGCGTCGCTAGCCGTTACGTTGGTACCA.............................................................................................. 29 1 14 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................CCTCGCGCGCCGGCTCCACACCT... 23 0 14 0.07 1 1 0 0 0 0 0
................................................................................................................................................................CTGAAAGCGCCGCTTTTCAAGTT.................................................................... 23 0 14 0.07 1 1 0 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTACCAA............................................................................................. 27 0 14 0.07 1 0 1 0 0 0 0
............................................................................................................................................................AAAGCTGAAAGCGCCGCTTTTCAAGTTA................................................................... 28 1 14 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................CCTCGCGCGCCGGCTCCTCAC..... 21 1 14 0.07 1 0 1 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTAGC............................................................................................... 25 1 14 0.07 1 0 1 0 0 0 0
..............................................................................................................................................................AGCCGAAAGCGCCGCTTTTCAAGT..................................................................... 24 1 14 0.07 1 1 0 0 0 0 0
..................................................................................................................................GCGTCGCTAGCCGTTACGTTGGTACC............................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0
.................................................................................................................................AGCGTCGCTAGCCGTTACGTCGGTACC............................................................................................... 27 1 14 0.07 1 1 0 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTAACA.............................................................................................. 26 1 14 0.07 1 0 1 0 0 0 0
........................................................................................................................................CTAGCCGTTACGTTGGTACCAA............................................................................................. 22 0 14 0.07 1 0 1 0 0 0 0
................................................................................................................................................................................................................................ACCTCGCGCGCCGGCTCCACACCT... 24 1 14 0.07 1 0 0 1 0 0 0
.................................................................................................................................................................TGAAAGCGCCGCTTTTCAAGTT.................................................................... 22 0 14 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTCAACGTAACG...................................... 29 0 14 0.07 1 0 1 0 0 0 0
.............................................................................................................................................................ATGCTGAAAGCGCCGCTTTTCAAGTT.................................................................... 26 1 14 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CACTCAACGTAACGGCTGCG................................ 20 0 14 0.07 1 0 1 0 0 0 0
.......................................................................................................................................GCTAGCCGTTACGTTGGTACCAAA............................................................................................ 24 0 14 0.07 1 1 0 0 0 0 0
................................................................................................................................................................................................................................GCCTCGCGCGCCGGCTCCACA...... 21 0 14 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................................CCCGTGCTTCGACACCACTCAACGTAACG...................................... 29 1 14 0.07 1 0 1 0 0 0 0
..........................................................................................................................................................................................CGGGCTTCGACACCACTCAACGTAAC....................................... 26 0 14 0.07 1 1 0 0 0 0 0
.....................................................................................................................................TCGCTAGCCGTTACGTTGGTACCA.............................................................................................. 24 0 14 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................AGCTGAAAGCGCCGCTTTTCAAGT..................................................................... 24 0 14 0.07 1 1 0 0 0 0 0
................................................................................................................................CAGCGTCGCTATCCGTTACGTTGGTACC............................................................................................... 28 1 14 0.07 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................CCGCCTCGCGCGCCGGCTTCACACCT... 26 2 14 0.07 1 0 1 0 0 0 0
..................................................................................................................................GCGTCGCTAGCCGTTACGTTGGTACCA.............................................................................................. 27 0 14 0.07 1 1 0 0 0 0 0
..................................................................................................................................TCGTCGCTAGCCGTTACGTTGGTACC............................................................................................... 26 1 14 0.07 1 0 1 0 0 0 0
...........................................................................................................................................................AAAAGCTGAAAGCGCCGCTTTTCAAATT.................................................................... 28 2 14 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................................CCGGGCTTCGACACCACTCA.............................................. 20 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................AGCGTCGCTAGCCGTTACGTTGGT.................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................................................TCCCGGGCTTCGACACCACTGAACGT.......................................... 26 1 15 0.07 1 0 1 0 0 0 0
...........................................................................................................................................................................................GGGCTTCGACGCCACTCAACGT.......................................... 22 1 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................GAAAGCGCCACTTTTCAAGTT.................................................................... 21 1 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTCAACG........................................... 24 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................GCGTCGCTAGCCGTTACGTTGGTAC................................................................................................ 25 0 15 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................................................TACCGGGCTTCGACACCACTCAACGT.......................................... 26 1 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................TCGCGCGCCGGCTCCACACCTC.. 22 0 15 0.07 1 0 0 0 0 1 0
............................................................................................................................................................................................GGCTTCGACACCACTCAACGTAACG...................................... 25 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACTCCACTCAACGT.......................................... 25 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................CCGCTTTTCAAGTTTCCCGGGCTTCGAC...................................................... 28 0 15 0.07 1 0 1 0 0 0 0
.........................................................................................................................................................................................CCGGGCTTCGAAACCACTCAACGT.......................................... 24 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................................................CTCCCTAGCCGTTACGTTGGTACC............................................................................................... 24 2 15 0.07 1 0 0 1 0 0 0
..........................................................................................................................................................................................CGGGCTTCGACACCACTCAAC............................................ 21 0 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................................................AACGTAACGGCTGCGGCT............................. 18 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................TGCGTCGCTAGCCGTTACGTTGGT.................................................................................................. 24 1 15 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................................CTCCCGGGCTTCGACACCACTCAACG........................................... 26 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................................CAGGGCTTCGACACCACTCAAAGT.......................................... 24 2 15 0.07 1 0 1 0 0 0 0
.........................................................................................................................................................................................CCGGGCTTCGACACCACTCAACG........................................... 23 0 15 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................................................GGGCTTCGACACCACTCATCGT.......................................... 22 1 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................GCCGCTTTTCAAGTTTCCCGGGCTT.......................................................... 25 0 15 0.07 1 0 0 1 0 0 0
......................................................................................................................................................................................TTCCCGGGCTTCGACACCACTCAACTT.......................................... 27 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................CGCGCGCCGGCTCCACACCTC.. 21 0 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................................CCCGGGCTTCGACACCACTC............................................... 20 0 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................AAAGCGCCGCTTTTCAAGT..................................................................... 19 0 15 0.07 1 1 0 0 0 0 0
...............................................................................................................................................................................................TTCGACACCACTCAACGTAAC....................................... 21 0 15 0.07 1 0 1 0 0 0 0
...................................................................................................................................................................AAAGCGCCGCTTTTCAAGTT.................................................................... 20 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................................CCCGGGCTGCGACACCACTC............................................... 20 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGGGCTTCGACACTACTCAACGT.......................................... 23 1 15 0.07 1 0 1 0 0 0 0
.....................................................................................................................................................................................TTTCCCGGGCTTCGACACCACTCAACGT.......................................... 28 0 15 0.07 1 0 1 0 0 0 0
..............................................................................................................................CTCAGCGTCGCTAGCCGTTACGTTGGT.................................................................................................. 27 1 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................CGTCGCTAGCCGTTACGTTGGTACGA.............................................................................................. 26 1 15 0.07 1 0 1 0 0 0 0
.....................................................................................................................................................................................ATTCCCGGGCTTCGACACCACTCAACGT.......................................... 28 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................................................TTCCCCGGCTTCGACACCACTCAACGT.......................................... 27 1 16 0.06 1 0 1 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGTT.................................................................................................. 25 1 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................GGGCGCGTTCAGCGTCGCTAGCCGT........................................................................................................... 25 0 17 0.06 1 1 0 0 0 0 0
................................................................................................................................CAGCGTCGCTAGCCGTTACGTTGG................................................................................................... 24 0 17 0.06 1 1 0 0 0 0 0
........................................................................................................................GGCGCGTTCAGCGTCGCTAGCCGTTACG....................................................................................................... 28 0 17 0.06 1 1 0 0 0 0 0
........................................................................................................................GGCGCGTTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 29 0 17 0.06 1 0 1 0 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGTTACCTT..................................................................................................... 26 1 19 0.05 1 0 1 0 0 0 0
...............................................................................................................................TCATCGTCGCTAGCCGTTACGTT..................................................................................................... 23 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................................CTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGGT.......................................................................................................... 21 1 19 0.05 1 0 1 0 0 0 0
...............................................................................................................................TCAGCGTCGCTAGCCGTTACGT...................................................................................................... 22 0 19 0.05 1 1 0 0 0 0 0
............................................................................................................................CGTTCAGCGTCGCTAGCCGTTACTT...................................................................................................... 25 1 19 0.05 1 0 1 0 0 0 0
..........................................................................................................................CGCGTTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 27 0 19 0.05 1 0 1 0 0 0 0
...............................................................................................................................CCAGCGTCGCTAGCCGTTACGGT..................................................................................................... 23 2 19 0.05 1 0 1 0 0 0 0
..........................................................................................................................CGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 23 0 19 0.05 1 0 1 0 0 0 0
..............................................................................................................................TTCAGCGTCGCTAGCCGTTACGTG..................................................................................................... 24 1 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................GCGTTCAGCGTCGCTAGCCGTTACGT...................................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................GCGTTCAGCGTCGCTAGCCGT........................................................................................................... 21 0 19 0.05 1 0 0 1 0 0 0
.............................................................................................................................CTTCAGCGTCGCTAGCCGTTACGTT..................................................................................................... 25 1 19 0.05 1 0 1 0 0 0 0
.........................................................................................................................TTGCGTTCAGCGTCGCTAGCCGTT.......................................................................................................... 24 2 19 0.05 1 0 0 0 1 0 0
.............................................................................................................................GTTCAGCGTCGCTAGCCGTTA......................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
.................................................................................................................................................ACGTTGGTACCAACGCGGC....................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
..................................................................................................................................................................................................GACGCCACTAAACGTAACAG..................................... 20 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................CCGTCGCTAGTCGTTATGTT..................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................GCGTCGCTAGCCGTTACGTT..................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:3160818-3161068 + dmo_1415 AATA-AACGTGACGGTCGCACCTTCGGGAAGCGTGACCATC--GCTCTACAAAGTAAGGGGGGGGG--------GGGGAGGG----GTTGTAAGGC--GGCTCGATGA-------------GCCACCTCACATAAGTCGTTTTCAAACGCCCGCGCAAGTCGCAGCGATCGGCAATGCAACCATGGTTTCGACTTTCGCGGCGAAAAGTTCAAAGGGCCCGAAGCTGTGGTGAGTTGCATTGCCGACGCCGAAGCG---GAGCGCGCGGCCGAGGTGTGGA---GGC
droVir3 scaffold_12728:191864-191943 - TCCAGGATGCGACGGT----------------------ATC--GTC-GTCGAAGTAAGGGGGGGTG--------GGGGTGGA----GGGGTGGGGGGACCCCG---------------------------CTTAGGTTATT-----------------------------------------------------------------------------------------------------------------------------------------------TCC
droGri2 scaffold_14906:5913892-5913956 + TGAC---------AGTTGCGGCCATGAACAGC--AACAATCACA----ATCAAGCAAGGGGGGGGG--------GGGGGGGG----GCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA
droWil2 scf2_1100000004954:4013164-4013210 + AAGG-GAGAT---------------------------AATCGAGTTTTTCAAATTACGGGGGGGGG--------G-----GG----AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGG
dp5 3:2040240-2040307 + CGAG-------------------------------------------------------GT-----GGTGGTGA------------ATCGCATTG---------------------------------------------------------------------------------------------------------------------------------------------------CCGCTGGCGAAATAATCCAGCGACCGGCCAACGCATTGAAGGAGC
droPer2 scaffold_7133:1183-1239 + GAGG-------------------------------------------------------GG-----GGGGGGGGGG----G-----GGCATAAAGG--GGTTTGGCGAGTAATAACATTTGA---------------CGC------------------------------------------------------------------------------------------------------------------------------------------------TTT
droAna3 scaffold_13248:3036629-3036653 - AGGG-------------------------------------------------------GG-----GGGGGGGGGG----GG----ACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA
droBip1 scf7180000393011:40399-40448 - CATA-AATAT---------------------------AACCATA-----ATAAGTAAGGGGGGGGG--------GGGGGGGG---------AAGGT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT
droKik1 scf7180000302698:1410038-1410073 + AAAA---------------------------------------------TCAGGTGGGGGGGGGGG--------G-----GG----GTTGGGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGG
droFic1 scf7180000453929:124645-124692 - AAAA-------------------------------------------------------GG-----GGGGGGGGGG----GGTGAAGGGGCGGGCGGTGGCTCACTAA-------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA
droEle1 scf7180000491201:289879-289932 + GCAG-------------------------------------------------------CG-----ATAGGA--------------AATGCAAAT---------------------------------------------------------------------------------------CCGCCTTCCACTTTCCAGCTCAAAAGTTCA------------------------------------------------------------------------AAG
droRho1 scf7180000777097:462077-462126 + AGTG-------------------------------------------------------GG-----GGGGGGGGGG----GGAGGGGGAGGGAGG-------------GCAGGAACGATGGG---------------CG-------------------------------------------------------------------------------------------------------------------------------------------------ATC
droBia1 scf7180000302523:5446-5505 - TAAG-------------------------------------------------------AC-----GTATTAAA------------------------------------------------------------------------CCTCTGGCGCAAGGCGCTAGGCTTGGCAATGTAACCACCGGTT-----------------------------------------------------------------------------------------------TAA
droTak1 scf7180000415789:3106-3144 + AGGG-------------------------------------------------------GG-----GGGGGGGGGG----GGAGGGAGCGAAGGGC--AGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGA
droEug1 scf7180000409106:16585-16614 + TTTA---------------------------------------------CAAGGTGGAGGGGGGGG--------G-----GG----GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGG
dm3 chr3R:1755481-1755506 + GGTG-------------------------------------------------------GG-----GGGGGGGG------------GTTGTAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGG
droYak3 v2_chrUn_5714:44-78 - TGGG-------------------------------------------------------GG-----GGGGGGGGGG----GGGG--GGGGGGGGGC--GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC
droEre2 scaffold_4690:14608705-14608736 + AAGG-------------------------------------------------------GG-----GGCTGGGGGG---GGT----GTTGCACGGC--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AATA-AACGTGACGGTCGCACCTTCGGGAAGCGTGACCATC--GCTCTACAAAGTAAGGGGGGGGG--------GGGGAGGG----GTTGTAAGGC--GGCTCGATGA-------------GCCACCTCACATAAGTCGTTTTCAAACGCCCGCGCAAGTCGCAGCGATCGGCAATGCAACCATGGTTTCGACTTTCGCGGCGAAAAGTTCAAAGGGCCCGAAGCTGTGGTGAGTTGCATTGCCGACGCCGAAGCG---GAGCGCGCGGCCGAGGTGTGGA---GGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.ATA-AACGTGACGGTCGCACCTTC......................................................................................................................................................................................................................................................................2354.00201500032
.ATA-AACGTGACGGTCGCACCTT.......................................................................................................................................................................................................................................................................2252.0010900010
.ATA-AACGTGACGGTCGCACCTTCG.....................................................................................................................................................................................................................................................................2452.00101000000
.ATA-AACGTGACGGTCGCACCTTCGG....................................................................................................................................................................................................................................................................2551.608800000
.ATA-AACGTGACGGTCGCACCTTCGGGA..................................................................................................................................................................................................................................................................2751.407600001
.ATA-AACGTGACGGTCGCACCTTCGGG...................................................................................................................................................................................................................................................................2651.206600000
.ATA-AACGTGACGGTCGCACC.........................................................................................................................................................................................................................................................................2051.005400010
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGC..............................................................22150.6710620101
........................................................................................................................................TCGTTTTCAAACGCCCGCGCAAGTCG.............................................................................................................................2620.501100000
........................................................................................................................................TCGTTTTCAAACGCCCGCGCAAGTCGCAG..........................................................................................................................2920.501100000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCT.............................................................23150.477600010
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTG............................................................24150.477600001
.ATA-AACGTGACGGTCGCACCT........................................................................................................................................................................................................................................................................2150.402200000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTGG.........................................................27150.335500000
.....................................CATC--GCTCTACAAAGTAAGGG...................................................................................................................................................................................................................................2140.251100000
.ATA-AACGTGACGGTCGCACCTTCGGT...................................................................................................................................................................................................................................................................2650.201100000
.ATA-AACGTGACGGTCGCACCTTCGGC...................................................................................................................................................................................................................................................................2650.201100000
..TA-AACGTGACGGTCGCACCTTT......................................................................................................................................................................................................................................................................2250.201100000
..TA-AACGTGACGGTCGCACCTTCG.....................................................................................................................................................................................................................................................................2350.201100000
..TA-AACGTGACGGTCGCACCTTCGG....................................................................................................................................................................................................................................................................2450.201100000
.ATA-AACGTGACGGTCGCACCTTCGGGAT.................................................................................................................................................................................................................................................................2850.201100000
.....................................................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCGA...................................23120.172200000
.........................................................................................................TGA-------------GCCACCTCACATAAGTCGTTTTCAAA............................................................................................................................................2970.141100000
........................................................................................................................................................................................................................................................CCGAAGCG---GAGCGCGCGGCCG...............21140.142100001
.....................................................................................................TCGATGA-------------GCCACCTCACATAAGTCG....................................................................................................................................................2570.141100000
.........................................................................................................................................................................................................................................GTTGCATTGCCGACGCCGAAGCG---GAG.........................2690.111100000
.......................TCGGGAAGCGTGACCATC--GCTC................................................................................................................................................................................................................................................2290.111010000
.............................................................................................................................................................AGTCGCAGCGATCGGCAATGC.............................................................................................................21190.112000020
.....................................................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCGAAG.................................25100.101000010
.....................................................................................................TCGATGA-------------GCCACCTCACATAAG.......................................................................................................................................................22110.091100000
...............................................................................................................................................................................................................................................TTGCCGACGCCGAAGCG---GAGCG.......................22110.091100000
....................................................................................................................................................................................CCATGGTTTCGACTTTCGCGGCG....................................................................................23120.081100000
.....................................................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCCG....................................22120.081100000
.....................................................................................................................................................................................................................................GTGAGTTGCATTGCCGACGCC.....................................21130.081100000
......................................................................................................CGATGA-------------GCCACCTCACATAAG.......................................................................................................................................................21130.081100000
..........................................................................................................................................................................................................GAAAAGTTCAAAGGGCCCGAAGCTG............................................................25150.071100000
..........................................................................................................................................................................................................GAAAAGTTCAAAGGGCCCGAAGC..............................................................23150.071100000
........................................................................................................................................................................................................................................................................CGCGGCCGAGGTGTGGA---GGC20150.071100000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTT..........................................................26150.071100000
............................................................................................................................................................................................................AAAGTTCAAAGGGCCCGAAGC..............................................................21150.071100000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCG..................................................................18150.071100000
...............................................................................................................................................................................................................GTTCAAAGGGCCCGAAGCTC............................................................20150.071100000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAAGCTGTC..........................................................26150.071100000
...........................................................................................................................................................................................................AAAAGTTCAAAGGGCCCGAA................................................................20150.071100000
.......................................................................................................................................................................................................GGCGAAAAGTTCAAAGGGCCC...................................................................21150.071000010
......................................................................................................................................................CCGCGCAAGTCGCAGCGAT......................................................................................................................19180.061100000
droVir3
TCCAGGATGCGACGGT----------------------ATC--GTC-GTCGAAGTAAGGGGGGGTG--------GGGGTGGA----GGGGTGGGGGGACCCCG---------------------------CTTAGGTTATT-----------------------------------------------------------------------------------------------------------------------------------------------TCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TGAC---------AGTTGCGGCCATGAACAGC--AACAATCACA----ATCAAGCAAGGGGGGGGG--------GGGGGGGG----GCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAGG-GAGAT---------------------------AATCGAGTTTTTCAAATTACGGGGGGGGG--------G-----GG----AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
CGAG-------------------------------------------------------GT-----GGTGGTGA------------ATCGCATTG---------------------------------------------------------------------------------------------------------------------------------------------------CCGCTGGCGAAATAATCCAGCGACCGGCCAACGCATTGAAGGAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................ATCCAGCGACCGGCCAACG............1911.0010100000000
.......................................................................TGA------------ATCGCATTG---------------------------------------------------------------------------------------------------------------------------------------------------CCGCTGGCGAAA.................................2411.0010100000000
droPer2
GAGG-------------------------------------------------------GG-----GGGGGGGGGG----G-----GGCATAAAGG--GGTTTGGCGAGTAATAACATTTGA---------------CGC------------------------------------------------------------------------------------------------------------------------------------------------TTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGGG-------------------------------------------------------GG-----GGGGGGGGGG----GG----ACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CATA-AATAT---------------------------AACCATA-----ATAAGTAAGGGGGGGGG--------GGGGGGGG---------AAGGT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTSizeHit CountTotal NormTotal
No Reads
droKik1
AAAA---------------------------------------------TCAGGTGGGGGGGGGGG--------G-----GG----GTTGGGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGSizeHit CountTotal NormTotal
No Reads
droFic1
AAAA-------------------------------------------------------GG-----GGGGGGGGGG----GGTGAAGGGGCGGGCGGTGGCTCACTAA-------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------TTASizeHit CountTotal NormTotal
No Reads
droEle1
GCAG-------------------------------------------------------CG-----ATAGGA--------------AATGCAAAT---------------------------------------------------------------------------------------CCGCCTTCCACTTTCCAGCTCAAAAGTTCA------------------------------------------------------------------------AAGSizeHit CountTotal NormTotal
No Reads
droRho1
AGTG-------------------------------------------------------GG-----GGGGGGGGGG----GGAGGGGGAGGGAGG-------------GCAGGAACGATGGG---------------CG-------------------------------------------------------------------------------------------------------------------------------------------------ATCSizeHit CountTotal NormTotal
No Reads
droBia1
TAAG-------------------------------------------------------AC-----GTATTAAA------------------------------------------------------------------------CCTCTGGCGCAAGGCGCTAGGCTTGGCAATGTAACCACCGGTT-----------------------------------------------------------------------------------------------TAASizeHit CountTotal NormTotal
No Reads
droTak1
AGGG-------------------------------------------------------GG-----GGGGGGGGGG----GGAGGGAGCGAAGGGC--AGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGASizeHit CountTotal NormTotal
No Reads
droEug1
TTTA---------------------------------------------CAAGGTGGAGGGGGGGG--------G-----GG----GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGSizeHit CountTotal NormTotal
No Reads
dm3
GGTG-------------------------------------------------------GG-----GGGGGGGG------------GTTGTAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...G-------------------------------------------------------GG-----GGGGGGGG------------GTTGTAA..................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droYak3
TGGG-------------------------------------------------------GG-----GGGGGGGGGG----GGGG--GGGGGGGGGC--GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AAGG-------------------------------------------------------GG-----GGCTGGGGGG---GGT----GTTGCACGGC--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 12:28 AM