ID:

dmo_1405

 Coordinate:

scaffold_6498:2686069-2686219 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8 -7.1 -7.0 -6.9

Flybase annnotation

exon [dmoj_GLEANR_14263:1]; CDS [Dmoj\GI14136-cds]; intron [Dmoj\GI14136-in]

Repeatable elements

NameClassFamilyStrand
Gypsy6-I_Dmoj-intLTRGypsy-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAGTGAACTCAGAGCCCTTCCCGAAACGCTTCTCGATCTCGGCCGCCGAGTAATTGTTGCTTTGTATGCTGGTAAATCCACCGAACGCTCAATCCTGGGTTATGATATTCGTCGTCTTCTATCTTAAATGTTTATTTATTCCTCTCAGTTTATTCAAAACTTATTCCGTTACTGCTGTTCTATTTATTTGTTTCTCTCCTTTTTTTTATTTTATATATATATATAAGTTAAGCGCTCCCATACTAGAGTA
**********************************************************.............((.........((((.(((((....))))).......))))...........))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
....................................................................................................TTATGATATTCGTCGTCTTCTATCT.............................................................................................................................. 25 0 1 18.00 18 18 0 0 0 0
...............................TCTCGATCTCGGCCGCCGAGTAATTG.................................................................................................................................................................................................. 26 0 1 17.00 17 16 0 1 0 0
...............................TCTCGATCTCGGCCGCCGAGTAAT.................................................................................................................................................................................................... 24 0 1 12.00 12 12 0 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTCT.................................................................................................................................. 25 0 1 11.00 11 9 2 0 0 0
...............................TCTCGATCTCGGCCGCCGAGTA...................................................................................................................................................................................................... 22 0 1 6.00 6 3 3 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTCTA................................................................................................................................. 26 0 1 6.00 6 4 2 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTC................................................................................................................................... 24 0 1 6.00 6 3 2 0 1 0
..........................................................TGCTTTGTATGCTGGTAAATCCACCGAAC.................................................................................................................................................................... 29 0 1 5.00 5 5 0 0 0 0
...............................TCTCGATCTCGGCCGCCGAGTAATT................................................................................................................................................................................................... 25 0 1 5.00 5 5 0 0 0 0
..........................................................TGCTTTGTATGCTGGTAAATCCACCGA...................................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0
.....................................................................................................TATGATATTCGTCGTCTTCTATCTTA............................................................................................................................ 26 0 1 4.00 4 4 0 0 0 0
...............................................................TGTATGCTGGTAAATCCACCGAACGC.................................................................................................................................................................. 26 0 1 3.00 3 2 1 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTCTATC............................................................................................................................... 28 0 1 3.00 3 1 2 0 0 0
..............................................................TTGTATGCTGGTAAATCCACCGAACGC.................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0
...............................TCTCGATCTCGGCCGCCGAGTAA..................................................................................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0
..............................TTCTCGATCTCGGCCGCCGAGTAATTG.................................................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0
......................................................................................................................................................TTATTCAAAACTTATTCCGTTACTGC........................................................................... 26 0 1 2.00 2 1 1 0 0 0
....TTAACTCAGAGCCCTTCCCGAAACGCT............................................................................................................................................................................................................................ 27 1 1 2.00 2 0 2 0 0 0
.....................................................................................................TATGATATTCGTCGTCTTCTATCT.............................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
.........................................................TTGCTTTGTATGCTGGTAAATCCACCG....................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.......................GAAACGCTTCTCGATCTCGGCCGCC........................................................................................................................................................................................................... 25 0 1 2.00 2 0 1 0 1 0
....TGAACTCAGAGCCCTTCCCGAAACGCT............................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
...............................TCTCGATCTCGGCCGCCGAGT....................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0
...............................TCTCGATCTCGGCCGCCGAGTAATC................................................................................................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0
..........................................................TGCTTTGTATGCTGGTAAATCCACCGAA..................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
....................................................................................................TTATGATATTCGTCGTCTTCTATC............................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................TTCAAAACTTATTCCGTTACTGCTG......................................................................... 25 0 1 1.00 1 1 0 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTCTAAA............................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
....TGAACTCAGAGCCCTTCTCGAAACGC............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
....................................................................................................TTATGATATTCGTCGTCTTCTA................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
.....................................TCTCGGCCGCCGAGTAATTGTTGC.............................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTT.................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................TTCTCGATCTCAGCCGCCGAGTAAT.................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.................................TCGATCTCGGCCGCCGAGTAATTGTC................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................TCAAAACTTATTCCGTTACTGCTTTC....................................................................... 26 2 1 1.00 1 1 0 0 0 0
...........................CGCTTCTCGATCTCGGCCGCCGAGT....................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...........................CGCTTCTCGATCTCGGCCGCCGAGTAA..................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................TCAATCCTGGGTTATGATATTCGTCGTC...................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
..........................................................................................CAATCCTGGGTTATGATATTCGTCG........................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..............................TTCTCGATCTCGGCCGCCGAGTAATC................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................................................................................................TTATGATATTCGTCGTCTTCTATCTC............................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................TCCGTTACTGCTGTTCTATTTATTC............................................................. 25 1 1 1.00 1 1 0 0 0 0
...............................................................TGCATGCTGGTAAATCCACCGAACGC.................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
......................................................................................................................................................TTATTCAAAACTTATTCCGTTACTGCT.......................................................................... 27 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................TATTCCGTTACTGCTGTTCTATTTATT.............................................................. 27 0 1 1.00 1 1 0 0 0 0
..............................TTCTCGATCTCGGCCGCCGAGTA...................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................TTATGATATTCGTCGTCTTCTATCTTA............................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
................................................................................................TGGGTTATGATATTCGTCGTCTTCTTA................................................................................................................................ 27 2 1 1.00 1 0 1 0 0 0
..........................................................CGCTTTGTATGCTGGTAAATCCACCGA...................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................CTGTTCTATTTATTTGTTTCTCTCCTTC................................................ 28 1 1 1.00 1 1 0 0 0 0
...................................................................TGCTGGTAAATCCACCGAACGCTCAA.............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
....TGAACTCAGAGCCCTTCCCGAAACGCTT........................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................TATGCTGGTAAATCCACCGAACGCTCAAT............................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0
..............................................................TTGTATGCTGGTAAATCCACCGAAC.................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................TCAAAACTTATTCCGTTACTGCTGTTCTA.................................................................... 29 0 1 1.00 1 1 0 0 0 0
.........................AACGCTTCTCGATCTCGGCCGCCGAG........................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..............................TTCTCGATCTCGGCCGCCGAGTAATT................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................GGGTTATGATATTCGTCGTCTTCTT................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................TCAGTTTATTCAAAACTTATTCCGTC................................................................................ 26 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................TTTATTCAAAACTTATTCCGTTAC.............................................................................. 24 0 2 0.50 1 0 1 0 0 0
.................................................................................................................................................TCATTTTATTCAAAACTTATTCCGT................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................TAAATGTTTATTTATTCCTCTCAGTT.................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................CAGTTTATTCAAAACTTATTCCGTTA............................................................................... 26 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TCAGTTTATTCAAAACTTATTCCGC................................................................................. 25 1 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................CTCTGTTCTATTTATTTGTTTCTCTC.................................................... 26 2 2 0.50 1 0 1 0 0 0
.................................................................................................................................................TCAGTTTATTCAAAACTTATTCCGT................................................................................. 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................TTCCTCTCAGTTTATTCAAAACTT........................................................................................ 24 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................CAGTTTATTCAAAACTTATTCCGTTAC.............................................................................. 27 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................TCCTCTCAGTTTATTCAAAACTTATTCCG.................................................................................. 29 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................CAGTTTATTCAAAACTTATTCCGTT................................................................................ 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TCAGTTTATTCAAAACTTATTCCGTTAC.............................................................................. 28 0 2 0.50 1 1 0 0 0 0
.....................................................................................................TATGAAATTCGTCGTGTTCTC................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1
........................................................GTTGCTTTGAACGCTGGT................................................................................................................................................................................. 18 2 7 0.29 2 2 0 0 0 0
....................................................................................................................................................................................CGATTTATTTGTTTCTCTCC................................................... 20 1 4 0.25 1 0 1 0 0 0
.......................................................................................................................................................................................TTTATTTGTTTCTCTCCTT................................................. 19 0 5 0.20 1 1 0 0 0 0
.......................................................TGTTGCTTTGAACGCTGGT................................................................................................................................................................................. 19 2 5 0.20 1 1 0 0 0 0
...............................................................................................................................................................................................................................ATAAGTTAAGCGCTCCCATAC....... 21 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................................................TAAGTTAAGCGCTCCCATACTAGAGT. 26 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................................GAAGTTAAGCGCTCCCATACTAGAGT. 26 1 20 0.05 1 1 0 0 0 0
.....................................................................................................TATGATATTCGTCGTCTTCC.................................................................................................................................. 20 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

TCTCACTTGAGTCTCGGGAAGGGCTTTGCGAAGAGCTAGAGCCGGCGGCTCATTAACAACGAAACATACGACCATTTAGGTGGCTTGCGAGTTAGGACCCAATACTATAAGCAGCAGAAGATAGAATTTACAAATAAATAAGGAGAGTCAAATAAGTTTTGAATAAGGCAATGACGACAAGATAAATAAACAAAGAGAGGAAAAAAAATAAAATATATATATATATTCAATTCGCGAGGGTATGATCTCAT
******************************************************************************************************************************.............((.........((((.(((((....))))).......))))...........))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
............CTCGGGAAGGGCTTTGCGAAGAGCT...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................GGCACTGACGACCAGATAA.................................................................. 19 2 1 1.00 1 1 0 0 0
..................................................................................GCTTGCGAGTTAGGACCCAATA................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
..............................................GGCTCATTAACAACGAAACATACGAC................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
.................GAAGGGCTTTGCGAAGAGCTAGAG.................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.......................................................................................CGAGTTAGGACCCAATACTATAA............................................................................................................................................. 23 0 20 0.80 16 10 6 0 0
.............................................CGGCTCATTAACAACGAAACAT........................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0
............................................GCGGCTCATTAACAACGAAACAT........................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
............................................GCGGCTCATTAACAACGAAACATA....................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
............................................................................................................................................................TTTGAATTAAGGCAATGACGAC......................................................................... 22 3 4 0.25 1 0 0 1 0
.......................................................................................CGAGTTAGGACCCAATACTATAAG............................................................................................................................................ 24 0 20 0.25 5 5 0 0 0
......................................................................................GCGAGTTAGGACCCAATACTATAAG............................................................................................................................................ 25 0 20 0.20 4 4 0 0 0
........................................................................................GAGTTAGGACCCAATACTATAA............................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
................................................................................TGGCTTGCGAGTTCGGTCG........................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0
.......................................................................................CGAGTTAGGACCCAATACTACAA............................................................................................................................................. 23 1 20 0.05 1 0 1 0 0
.......................................................................................CGAGTTAGGACCCAATACTTTGA............................................................................................................................................. 23 2 20 0.05 1 0 1 0 0
...................................................................................................................................................................................................................................CAATTCGCGAGGGTATGATCTCAT 24 0 20 0.05 1 1 0 0 0
.....................................................................................TGCGAGTTAGGACCCAATACTATAA............................................................................................................................................. 25 0 20 0.05 1 0 1 0 0
.......................................................................................CGATGTAGGACCCAATACTAGAA............................................................................................................................................. 23 3 20 0.05 1 0 0 0 1
........................................................CAGCTAAACTTACGACCAT................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0
......................................................................................GCGAGTTAGGACCCAATA................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:2686019-2686269 + dmo_1405 AGAGTGAACTCAGAGCCCTTCCCGAAACGCTTCTCGATCTCGGCCGCCGAGTAATTGTTGCTTTGTATGCTGGTAAATCCACCGAACGCTCAATCCTGGGTTATGATATTCGTCGTCTTCTATCTTAAATGTTTATTTATTCC--TCTCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCTGTTCTATTTATTTGTTTCTCTCCTTTTTTTTATTTTATA------TATAT-----ATATAAGTTAAGCGCTCCCATACTAGAGTA
droVir3 scaffold_12936:559352-559613 - CGCGC-CCCTCCTTGTCCAGCCCAAACTCCTGGGCGATC---GCCACTAACTCCTTTTTGCGTT----GCTGATGAATCCAGCGGACGCCTACCCCCGGGTTTTGCCACTCACCTGCCTCC----------------------------A----------------------------TCCTTTATTGTAT-------------ACTTCCTTGCTAGTCGACGTCC----------------------------------CTGTCTCCCTCTCTCTTACCGTTCTAGGGGTTCCGTCGGTCCCTTTACTATTCCTCTCTCCTTTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-TTTTT----TTTTTATT------T------ATATA------------TAT-------------
droGri2 scaffold_467:779-845 + TTTTA-TTTTATTTATTA-----------------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------TTTT-----------------------------------------------------------------------------------------------ACT-------------------------------------------------------------TTTGTTTCATATTTATTTATTTTATATTATCTTT---------------------------TTTTT------------TAT-------------
droWil2 scf2_1100000002542:1509-1596 + GTTGC-TGCTGCTCTGTC-----------------------------------------------------------------------------------------------------------C----------------------------------------CA-------TAT-------------GGGC-------------G-----------------------------------------------------------------------------------------------------------CGGCA---------------------------TA--------TTTT-TTTT-----------------------TTTGTT--TTTTTTTTTTTTTTATA------TAGAC-----GTAGTCGTACAACGCTC-------------
dp5 Unknown_singleton_2135:449-594 - TTCAT-TTTATATTATCATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTATTTATTATTATTATTTTAATTTTTTTCTGATTTTATATTA--------------------------TCA--TTTATTATCTAT----------------------------------------------------------------ATTATTGTTGGTTTATTTATTTATACTTATTATTTTTTTTATTGGATA------TTTGTTTTTATT------------TTA-------------
droPer2 scaffold_3448:910-998 + TGTAT-TTAATGTTTTTTTT-------------------------------------------------------------------------------------------------------TTTTT---------------------------------------------------------------GTGTATACATATCTTTT-------------------------------------------TGCACATCT------------------------------------------------------------------------------------TGTA---------------T----------------AATTACATTTTTTTTCTCTTTTTTTT----------------------TATTT------------TAT-------------
droAna3 scaffold_8186:1694-1822 - TTCTT-TTTTTTTCATTT-----------------------------------------------------------------------------------------------------------CTAATGTTTTTTCATTTCATTTTCA----------------------------TTTTTTCTAATAT-------------TTTTTCTTTTCATTTTCCTTTTTTTTTTTTTTAAATATTTTTCTTATTTTATATTT---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAA------TA-----TATAT------------ATT-------------
droBip1 scf7180000393435:12565-12667 + TACTT-ATTTATTTTTTT-----------------------------------------------------------------------------------------------------------T-----------------------AATTTATATTCTTA-CTCTTATTTAA---TTTTTTTATTTAT-------------TCCCTTTTTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTTTTTTTTTTCTTATGTG------TA-----TATAT------------ATA-------------
droKik1 scf7180000299331:482-589 - TTTAT-TTTATTTTATTT-----------------------------------------------------------------------------------------------------------T-----------------------ATTTTATTTTATTTTA--------------------------TTT-------------------------------------------------------------------------------------------------------------TATTTTATTTTATTTTATTTTATTTTATTT---------------T--------ATTTA-TTTA-----------------------TTT----ATATTTATTTATTTTATT------TA-----TTTAT------------TTA-------------
droFic1 scf7180000452198:552-699 - GAGTT-ATGTTTTTGGT------------------------------------------------------------------------------------------------CGTTTCATAATTTATTTATTTATTTATT-----------------------CTGTTATTTAA---T--------------------------------------------------------------------------------------------------ATTCTGTTATTGATTTCATTACTTATTTTGCCATTGGTTTATTATTT-----ATTTTGATA--------------------TTTA-T--T-----------------------TACTTAT--------TTATTTATTT------ATTGT--TTATT------------TAT-------------
droEle1 scf7180000488322:5802-5899 - TAAAA-ATATAATTATTTA--------------------------------------------------------------------------------------------------------TGTTATTGTT-----------------------ATTCTTA-TTCT-------TAT-------------TAGT-------------A-----------------------------------------------------------------------------------------------------------TTATA-------------------------------------ATTA-TTAT-----------------------TACTTTTACTTTTCTTTATTTTTTA------TATGT--TAAAT------------TAA-------------
droRho1 scf7180000772628:1114-1186 + GTTCA-TTAATGGTATTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---------------------------------------------------------------------------------------------------------------------------TTCCCCTGAACTATTCTTTT--------------------------------TTCTCTTAGCTTCGTACTATTTT----------------ACAAA------------TAT-------------
droTak1 scf7180000413585:12904-12983 - CCGCC-AA--GGTCATTC-----------------------------------------------------------------------------------------------------------AGAATGAC--------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------TTT----------------------------------------ATTATTTTTTT--------------------------------TTTTTATATTCCTTTATTATTTTACACTTATATA-----TAGAC------------TAA-------------
droSim2 node_11269:1670-1710 - TATTT-TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA-TTTC-----------------------CTCGTCTTCTTTTCTCTT--------------------TTCTA------------TAT-------------
droSec2 scaffold_326:10554-10640 + TTCGA-TTTTTATTTATT-----------------------------------------------------------------------------------------------------------T----------------T--TATCA-----------------------------------------TTATTTTATATATTTCTC--CTT---------------------------------------------------------------------------------------------------------------------------TTTTTTTTAATT-------------------------------AATTTTTTTTCTTTTCTCTTT-T-------------------------TTTTT------------ATT-------------
droYak3 v2_chrUn_037:548-651 - ACATT-TGTCGAATATTA--------------------------------------------------------------------------------------------------------ATTTAAATGTATCTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTACTTGGTTATTTATTT-TTTT-TTTGTTTGCTTTTT-------------TTA----TTATTTATTGAATCTTCC------CT-----TTGTG------------TTA-------------
droEre2 scaffold_3002:2995-3043 + CTGTT-CTTTCTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------CTTA-TTTT-----------------------TTG----CTTTTTACTTATTTT----------------TTACA------------TGT-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGAGTGAACTCAGAGCCCTTCCCGAAACGCTTCTCGATCTCGGCCGCCGAGTAATTGTTGCTTTGTATGCTGGTAAATCCACCGAACGCTCAATCCTGGGTTATGATATTCGTCGTCTTCTATCTTAAATGTTTATTTATTCC--TCTCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCTGTTCTATTTATTTGTTTCTCTCCTTTTTTTTATTTTATA------TATAT-----ATATAAGTTAAGCGCTCCCATACTAGAGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................TTATGATATTCGTCGTCTTCTATCT................................................................................................................................................................................................................................................................................................................................................25118.00181800000
...............................TCTCGATCTCGGCCGCCGAGTAATTG....................................................................................................................................................................................................................................................................................................................................................................................................................26117.00171610000
...............................TCTCGATCTCGGCCGCCGAGTAAT......................................................................................................................................................................................................................................................................................................................................................................................................................24112.00121200000
................................................................................................TGGGTTATGATATTCGTCGTCTTCT....................................................................................................................................................................................................................................................................................................................................................25111.0011900020
...............................TCTCGATCTCGGCCGCCGAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................2216.006300030
................................................................................................TGGGTTATGATATTCGTCGTCTTCTA...................................................................................................................................................................................................................................................................................................................................................2616.006400020
................................................................................................TGGGTTATGATATTCGTCGTCTTC.....................................................................................................................................................................................................................................................................................................................................................2416.006300021
..........................................................TGCTTTGTATGCTGGTAAATCCACCGAAC......................................................................................................................................................................................................................................................................................................................................................................................2915.005500000
...............................TCTCGATCTCGGCCGCCGAGTAATT.....................................................................................................................................................................................................................................................................................................................................................................................................................2515.005500000
..........................................................TGCTTTGTATGCTGGTAAATCCACCGA........................................................................................................................................................................................................................................................................................................................................................................................2714.004400000
.....................................................................................................TATGATATTCGTCGTCTTCTATCTTA..............................................................................................................................................................................................................................................................................................................................................2614.004400000
...............................................................TGTATGCTGGTAAATCCACCGAACGC....................................................................................................................................................................................................................................................................................................................................................................................2613.003200010
................................................................................................TGGGTTATGATATTCGTCGTCTTCTATC.................................................................................................................................................................................................................................................................................................................................................2813.003100020
..............................................................TTGTATGCTGGTAAATCCACCGAACGC....................................................................................................................................................................................................................................................................................................................................................................................2713.003300000
...............................TCTCGATCTCGGCCGCCGAGTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
..............................TTCTCGATCTCGGCCGCCGAGTAATTG....................................................................................................................................................................................................................................................................................................................................................................................................................2713.003300000
.................................................................................................................................................................................................TTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGC......................................................................................2612.002100010
.....................................................................................................TATGATATTCGTCGTCTTCTATCT................................................................................................................................................................................................................................................................................................................................................2412.002200000
.........................................................TTGCTTTGTATGCTGGTAAATCCACCG.........................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.......................GAAACGCTTCTCGATCTCGGCCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000011
....TGAACTCAGAGCCCTTCCCGAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
...............................TCTCGATCTCGGCCGCCGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
...............................TCTCGATCTCGGCCGCCGAGTAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..........................................................TGCTTTGTATGCTGGTAAATCCACCGAA.......................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
....................................................................................................TTATGATATTCGTCGTCTTCTATC.................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................................................................................................................................TTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCTG....................................................................................2511.001100000
................................................................................................TGGGTTATGATATTCGTCGTCTTCTAAA.................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................................................................................................TTATGATATTCGTCGTCTTCTA...................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................TCTCGGCCGCCGAGTAATTGTTGC................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
................................................................................................TGGGTTATGATATTCGTCGTCTT......................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................TCGATCTCGGCCGCCGAGTAATTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................CGCTTCTCGATCTCGGCCGCCGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................CGCTTCTCGATCTCGGCCGCCGAGTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................TCAATCCTGGGTTATGATATTCGTCGTC........................................................................................................................................................................................................................................................................................................................................................2811.001000010
..........................................................................................CAATCCTGGGTTATGATATTCGTCG..........................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................TTCTCGATCTCGGCCGCCGAGTAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................TTATGATATTCGTCGTCTTCTATCTC...............................................................................................................................................................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................................TCC-------------------------------------------------------------GTTACTGCTGTTCTATTTATTC........................................................................2511.001100000
.................................................................................................................................................................................................TTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCT.....................................................................................2711.001000010
.............................................................................................................................................................................................................TAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCTGTTCTATTTATT.........................................................................2711.001100000
..............................TTCTCGATCTCGGCCGCCGAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................TTATGATATTCGTCGTCTTCTATCTTA..............................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................TGGGTTATGATATTCGTCGTCTTCTTA..................................................................................................................................................................................................................................................................................................................................................2711.001000010
......................................................................................................................................................................................................................................................................................................................................................................................CTGTTCTATTTATTTGTTTCTCTCCTTC...........................................................2811.001100000
...................................................................TGCTGGTAAATCCACCGAACGCTCAA................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....TGAACTCAGAGCCCTTCCCGAAACGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................TATGCTGGTAAATCCACCGAACGCTCAAT...............................................................................................................................................................................................................................................................................................................................................................................2911.001000010
..............................................................TTGTATGCTGGTAAATCCACCGAAC......................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................TCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTACTGCTGTTCTA...............................................................................2911.001100000
.........................AACGCTTCTCGATCTCGGCCGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................TTCTCGATCTCGGCCGCCGAGTAATT.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................GGGTTATGATATTCGTCGTCTTCTT...................................................................................................................................................................................................................................................................................................................................................2511.001100000
...................................................................................................................................................TCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTC...........................................................................................2620.501100000
................................................................................................................................................................................................TTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTAC.........................................................................................2420.501000010
.............................................................................................................................TAAATGTTTATTTATTCC--TCTCA-----------------------------------------GTT...........................................................................................................................................................................................................................................................................2620.501100000
....................................................................................................................................................CA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTA..........................................................................................2620.501100000
...................................................................................................................................................TCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GC............................................................................................2520.501000010
...................................................................................................................................................TCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GT............................................................................................2520.501100000
...........................................................................................................................................TTCC--TCTCA-----------------------------------------GTTTATTCAAAACTT...............................................................................................................................................................................................................................................................2420.501100000
....................................................................................................................................................CA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTAC.........................................................................................2720.501100000
............................................................................................................................................TCC--TCTCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------G.............................................................................................2920.501100000
....................................................................................................................................................CA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTT...........................................................................................2520.501100000
...................................................................................................................................................TCA-----------------------------------------GTTTATTCAAAACTTAT-----------------------------------------------------------------------------------------------TCC-------------------------------------------------------------GTTAC.........................................................................................2820.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................TTTATTTGTTTCTCTCCTT............................................................1950.201100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTTAAGCGCTCCCATAC.......21200.051000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTAAGCGCTCCCATACTAGAGT.26200.051100000
.....................................................................................................TATGATATTCGTCGTCTTCC....................................................................................................................................................................................................................................................................................................................................................20200.051000010
droVir3
CGCGC-CCCTCCTTGTCCAGCCCAAACTCCTGGGCGATC---GCCACTAACTCCTTTTTGCGTT----GCTGATGAATCCAGCGGACGCCTACCCCCGGGTTTTGCCACTCACCTGCCTCC----------------------------A----------------------------TCCTTTATTGTAT-------------ACTTCCTTGCTAGTCGACGTCC----------------------------------CTGTCTCCCTCTCTCTTACCGTTCTAGGGGTTCCGTCGGTCCCTTTACTATTCCTCTCTCCTTTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-TTTTT----TTTTTATT------T------ATATA------------TAT-------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTC.................................................................................................................................................262034.8069610000014017000101000000000000020800000132086001370000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................272012.902580003102000000097000000000000400000000500047000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGTGT---------------.................................................................................................................252012.652530010441000000000000000000000740000020088043000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................25207.401480011000100000000000000001300000000921110001000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................26207.10142000000407000000000001008660001400000042000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................27206.3012600000100150000000000000050956004000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGA................................................................................................................................................................................................................................................25205.6511300200000000009000000012000000024050000210220000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................26205.051010097000000000000000000000000000000000400000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCT..................................................................................................................................................25204.95990000001070005000000000003201606000130700110000000000000000000010000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGAC...............................................................................................................................................................................................................................................26204.8096000005000100000000000002900000000012292400500000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGT.............................................................................................................................................................................................................................................26203.857700100000000010000000000023901000000290022000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACTATTCCTCTCTCCTTTTCTTGGTGT---------------.................................................................................................................28203.5571001300000000000000000000000041000000001700000000000000000000000000
...............................................TAACTCCTTTTTGCGTT----GCTGATGAA................................................................................................................................................................................................................................................................................................................................................................................................2613.003000000000000000000000001101000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTCTC...............................................................................................................................................28202.4048000000010000140000000000201400000012005000000000000000000000000000
...............................................TAACTCCTTTTTGCGTT----GCTGAT...................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000010000000010000000000000000000000000
...............................................TAACTCCTTTTTGCGTT----GCTGATGA.................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000200000000000000000000000000
...............................................TAACTCCTTTTTGCGTT----GCTGATG..................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000100000100000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGACGT.............................................................................................................................................................................................................................................25202.004000000000000000000000000000000210150113800000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCC...................................................................................................................................................24201.953900000000200000000000000141400000100002060000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACGT.............................................................................................................................................................................................................................................28201.65330000000000000000000000000025000008000000000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................24201.55310000000000000000000000001900005200000500000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCGTCGGTCCCTTTACTATTCCTC.................................................................................................................................................25201.35270000000000000000000000004190000000110000000000000000000000000002
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGTGT---------------T--------........................................................................................................26201.15230000000000000000000000000000000200001605000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCG.................................................................................................................................................................................................................................................24201.1523000080000000000000000000600600000003000000000000000000000000000
..............................................CTAACTCCTTTTTGCGTT----GCTGATGAATCCAGCGGACGCCT..................................................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGACGTCC----------------------------------.........................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
...............................................TAACTCCTTTTTGCGTT----GCTGATA..................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
....................................................CCTTTTTGCGTT----GCTGATGAA................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACTATTCCTCTCTCCTTTTCTTGGTG.................................................................................................................................27200.95190015000000000000000000000000000000000400000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGTGT---------------T--------G.......................................................................................................27200.75150010000000000000000000000000000140000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGA................................................................................................................................................................................................................................................23200.7014000000000000000000000000370003001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACTATTCCTCTCTCCTTTTCTTG....................................................................................................................................24200.65130013000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTCT................................................................................................................................................27200.6513000000000000200000000002000000009000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACTATTCCTCTCTCCTTTTCTTGGT..................................................................................................................................26200.6012007000000000000000000000000000000000500000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTT.................................................................................................................................................26200.6012000000000000000000000002020000000024020000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCCTCTCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................25200.55110011000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATT.....................................................................................................................................................22200.5511000000000000000000000004050000000020000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-...............................................................2580.504000000000000000000000000102000000001000000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGAC...............................................................................................................................................................................................................................................23200.5010000000000000100000000000600001100010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTC....................................................................................................................................................23200.5010000000000000100000000000530000000001000000000000000000000000000
.....................................................................................................TTTGCCACTCACCTGCCTCC----------------------------A----------------------------TCCTT......................................................................................................................................................................................................................................................................................2620.501000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................29200.459000000000000000000000000000400000000050000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ACTATTCCTCTCTCCTTTTCTTGG...................................................................................................................................24200.459009000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GGTGTCT.................................................................................................25200.459000000000000000000000000005000011000110000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................T---------------T--------GGTGTCTTAT-----------------------CACTTTT-TTTTT----T.....................................................2570.433000000000000000000000000101000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTCTCT..............................................................................................................................................29200.408000000001000000000000000310000001020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GGTGTCTTA...............................................................................................27100.404000000000000000000000000003000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................T---------------T--------GGTGTCTTAT-----------------------CACTTTT-TTTTT----TT....................................................2650.402000000000000000000000000020000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTT..................................................................2680.383000000000000000000000000102000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGT...................................................................................................................................................................................................................................................22200.357000100100000000000000000005000000000000000000000000000000000000
..............GTCCAGCCCAAACTCCTGGGCGATC---GCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2930.331001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCG.................................................................................................................................................................................................................................................22200.306000000000000000000000001050000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................28200.306000020000000000000000000000000010000003000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTTGGTGT---------------.................................................................................................................23200.306005000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACT..............................................................................................................................................................................................................................................27200.306000000000000000000000004001000000000000000000000000000000001000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTA.....................................................................................................................................................................................................................................................20200.255000000000000000000000001000000003000001000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACA..............................................................................................................................................................................................................................................27200.255000000000001000000000000000000004000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTTGGTGT---------------T--------........................................................................................................24200.255000100000000000000000000000000040000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-...............................................................2880.252000000000000000000000000002000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACT...................................................................2490.222000000001000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACT...................................................................2690.222000000000000000000000000000000100010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTAC.........................................................................................................................................................18200.204000000000000000000000000000000001002010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GGTGTCTT................................................................................................26200.204000000000000000000000000003001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGG...................................................................................................................................22200.204004000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCT......................................................................................................................................................................................................................................................19200.204000000000000000000000000300000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTTGGTGT---------------T--------GGTG....................................................................................................28200.153003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTATTCCTCTCTCCTTTTCTTGGTGT---------------.................................................................................................................26200.153000000000000000000000000110001000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGAC...............................................................................................................................................................................................................................................24200.153000000000000000000000000000003000000000000000000000000000000000
........................................................................................................................................................................................ATTGTAT-------------ACTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................26200.153000000000000000000000000000200000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ACTATTCCTCTCTCCTTTTCTTGGTGT---------------.................................................................................................................27200.153000000000000000000000001002000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACGA.............................................................................................................................................................................................................................................28200.153000000000000000000000000001200000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTAT......................................................................................................................................................21200.153000000000000200000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCG.................................................................................................................................................................................................................................................21200.153000000000000000000000000000200000000010000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGTCGA................................................................................................................................................................................................................................................22200.153000000000000000000000000200000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-TTT............................................................2570.141000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-T..............................................................2570.141000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTTT-T..............................................................2670.141000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACTTT.................................................................2680.131000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACT...................................................................2790.111000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CAC....................................................................2490.111000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CAC....................................................................2590.111000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACT...................................................................2390.111000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CA.....................................................................2590.111000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTCTTGGTGT---------------T--------GGTGTCTTAT-----------------------CACT...................................................................2590.111000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTA.....................................................................................................................................................................................................................................................18200.102000000000000000000000000010000000010000000000000000000000000000
........................................................................................................................................................................................ATTGTAT-------------ACTTCCTTGCTAGTCGAC...............................................................................................................................................................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGTG.................................................................................................................................24200.102000010000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................20200.102000001000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCGTCGGTCCCTTTACTATTCCTCTC...............................................................................................................................................27200.102000000000000000000000000000000001000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTATTCCTCTCTCCTTTTCTTGGTG.................................................................................................................................25200.102000000000000000000000000200000000000000000000000000000000000000
..........................................................................................................................................................................................TGTAT-------------ACTTCCTTGCTAGT...................................................................................................................................................................................................................................................19200.102000000000000000000000000000000002000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGAT...............................................................................................................................................................................................................................................26200.102000010000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTCCTCTCTCCTTTTCTTGGT..................................................................................................................................23200.102000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGC................................................................................................................................................................................................................................................25200.102000020000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACA..............................................................................................................................................................................................................................................25200.102000000000000000000000000001100000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGTG............................................................................................................................................................................................................................................27200.102000000000000000000000000000000000010010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GGTGT...................................................................................................23200.102000000000000000000000000010010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCTCTCCTTTTCTTGGTGT---------------T--------GGTG....................................................................................................24200.102001000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................GACGTCC----------------------------------CTGTCTCCGGA..............................................................................................................................................................................................18200.051100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCTCCTTTTCTTGGTGT---------------T--------GGT.....................................................................................................21200.051000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACTA.............................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTAA................................................................................................................................................27200.051000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................A----------------------------TCCTTTATTGTAT-------------ACTTCCTTGCTAG....................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTC..................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTCGGTCCCTTTACTATTCCT..................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................CCGTTCTAGGGGTTCCGTCGG..................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................TTTATTGTAT-------------ACTTCCTTGCTAGTCGA................................................................................................................................................................................................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CTCTCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................TCCAGCGGACGCCTACCCCCGGGT........................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGTA............................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................ATTGTAT-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................28200.051000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TTATTGTAT-------------ACTTCCTTGCTAGTCGA................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGATA..............................................................................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCGTCGGTCCCTTTACT........................................................................................................................................................18200.051000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ACTATTCCTCTCTCCTTTTCTCCC...................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTTATTGTAT-------------ACTTCCTTGCTAGTC..................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................TTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGTCGGTCCCTTTACTATTCCTCTC...............................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................GGTTCCGTCGGTCCCTTTACTATTCCT..................................................................................................................................................27200.051000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AT-------------ACTTCCTTGCTAGTCGACGT.............................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTATTCCTCTCTCCTTTTCT......................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTTAG...............................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCTCAAA..............................................................................................................................................29200.051000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTC..................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................A----------------------------TCCTTTATTGTAT-------------ACTTCCTTGCTAGTC..................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000000000000000000000000000000001
.......................AAACTCCTGGGCGATC---GCCACTAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................TCCTTTATTGTAT-------------ACTTCCTTGCTAGTC..................................................................................................................................................................................................................................................28200.051000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CCGTCGGTCCCTTTACTATTCCTC.................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGTCGGTCCCTTTACTATTCCTC.................................................................................................................................................23200.051000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGA.............................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GTTCTAGGGGTTCCGTCGGTCC...............................................................................................................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................T-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCGTCGGTCCCTTTACTATTCCTCT................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
...........................TCCTGGGCGATC---GCCACTAACTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAG....................................................................................................................................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTC..........................................................................................................................................................17200.051000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................TCACCTGCCTCC----------------------------A----------------------------TCCTTTATTGTA...............................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTTGGTGT---------------T--------GGTGT...................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTCCTCTCTCCTTTTCTT.....................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCTG................................................................................................................................................................................................................................................25200.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................TCCTTTATTGTAT-------------ACTTCCTTGCTAGT...................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................TAT-------------ACTTCCTTGCTAGTCGACGTC............................................................................................................................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................CC----------------------------A----------------------------TCCTTTATTGTAT-------------ACTTCCTTGC.......................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CTCTCCTTTTCTTGGTGT---------------T--------GG......................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GGTCCCTTTACTATTCCTCTCTCCTTTT........................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTCTTGGTGT---------------T--------GGTGTCT.................................................................................................18200.051000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TCTAGGGGTTCCGTCGGTCCCTTTACTAA......................................................................................................................................................29200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGATTC.............................................................................................................................................................................................................................................28200.051000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGTCGGTCCCTTTACTATTCCTCTCTCC............................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTTCCGTCGGTCCCTTTACTATTCCTCTC...............................................................................................................................................29200.051000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCCTCTCTCCTTTTCTTGGTG.................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CCTTTTCTTGGTGT---------------T--------GGTGT...................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGACC..............................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CCTTTACTATTCCTCTCTCCTTTTCT......................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGTCGACGC.............................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTTCCGTCGGTCCCTTTACTATTCCTC.................................................................................................................................................27200.051000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................TTGTAT-------------ACTTCCTTGCTAGT...................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTATTCCG..................................................................................................................................................25200.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCCGTCGGTCCCTTTACTA.......................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGTAT-------------ACTTCCTTGCTAGTCGG................................................................................................................................................................................................................................................25200.051000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................AT-------------ACTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................21200.051000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTTCCTTGCTAGTCGACG..............................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
TTTTA-TTTTATTTATTA-----------------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------TTTT-----------------------------------------------------------------------------------------------ACT-------------------------------------------------------------TTTGTTTCATATTTATTTATTTTATATTATCTTT---------------------------TTTTT------------TAT-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GTTGC-TGCTGCTCTGTC-----------------------------------------------------------------------------------------------------------C----------------------------------------CA-------TAT-------------GGGC-------------G-----------------------------------------------------------------------------------------------------------CGGCA---------------------------TA--------TTTT-TTTT-----------------------TTTGTT--TTTTTTTTTTTTTTATA------TAGAC-----GTAGTCGTACAACGCTC-------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTATA------TAGAC-----GTAGTCGT......................25200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................TTTT-----------------------TTTGTT--TTTTTTTTTTTTTT.................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATA------TAGAC-----GTAGTCGTACAACGCT..............24200.05101000
dp5
TTCAT-TTTATATTATCATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTATTTATTATTATTATTTTAATTTTTTTCTGATTTTATATTA--------------------------TCA--TTTATTATCTAT----------------------------------------------------------------ATTATTGTTGGTTTATTTATTTATACTTATTATTTTTTTTATTGGATA------TTTGTTTTTATT------------TTA-------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................ATTATTATTTTAATTTT..........................................................................................................................................................................................................................1760.1710000000100
droPer2
TGTAT-TTAATGTTTTTTTT-------------------------------------------------------------------------------------------------------TTTTT---------------------------------------------------------------GTGTATACATATCTTTT-------------------------------------------TGCACATCT------------------------------------------------------------------------------------TGTA---------------T----------------AATTACATTTTTTTTCTCTTTTTTTT----------------------TATTT------------TAT-------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TTCTT-TTTTTTTCATTT-----------------------------------------------------------------------------------------------------------CTAATGTTTTTTCATTTCATTTTCA----------------------------TTTTTTCTAATAT-------------TTTTTCTTTTCATTTTCCTTTTTTTTTTTTTTAAATATTTTTCTTATTTTATATTT---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAA------TA-----TATAT------------ATT-------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TACTT-ATTTATTTTTTT-----------------------------------------------------------------------------------------------------------T-----------------------AATTTATATTCTTA-CTCTTATTTAA---TTTTTTTATTTAT-------------TCCCTTTTTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTTTTTTTTTTCTTATGTG------TA-----TATAT------------ATA-------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTAT-TTTATTTTATTT-----------------------------------------------------------------------------------------------------------T-----------------------ATTTTATTTTATTTTA--------------------------TTT-------------------------------------------------------------------------------------------------------------TATTTTATTTTATTTTATTTTATTTTATTT---------------T--------ATTTA-TTTA-----------------------TTT----ATATTTATTTATTTTATT------TA-----TTTAT------------TTA-------------SizeHit CountTotal NormTotal
No Reads
droFic1
GAGTT-ATGTTTTTGGT------------------------------------------------------------------------------------------------CGTTTCATAATTTATTTATTTATTTATT-----------------------CTGTTATTTAA---T--------------------------------------------------------------------------------------------------ATTCTGTTATTGATTTCATTACTTATTTTGCCATTGGTTTATTATTT-----ATTTTGATA--------------------TTTA-T--T-----------------------TACTTAT--------TTATTTATTT------ATTGT--TTATT------------TAT-------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAAAA-ATATAATTATTTA--------------------------------------------------------------------------------------------------------TGTTATTGTT-----------------------ATTCTTA-TTCT-------TAT-------------TAGT-------------A-----------------------------------------------------------------------------------------------------------TTATA-------------------------------------ATTA-TTAT-----------------------TACTTTTACTTTTCTTTATTTTTTA------TATGT--TAAAT------------TAA-------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTTCA-TTAATGGTATTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---------------------------------------------------------------------------------------------------------------------------TTCCCCTGAACTATTCTTTT--------------------------------TTCTCTTAGCTTCGTACTATTTT----------------ACAAA------------TAT-------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCGCC-AA--GGTCATTC-----------------------------------------------------------------------------------------------------------AGAATGAC--------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------TTT----------------------------------------ATTATTTTTTT--------------------------------TTTTTATATTCCTTTATTATTTTACACTTATATA-----TAGAC------------TAA-------------SizeHit CountTotal NormTotal
No Reads
droSim2
TATTT-TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA-TTTC-----------------------CTCGTCTTCTTTTCTCTT--------------------TTCTA------------TAT-------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTCGA-TTTTTATTTATT-----------------------------------------------------------------------------------------------------------T----------------T--TATCA-----------------------------------------TTATTTTATATATTTCTC--CTT---------------------------------------------------------------------------------------------------------------------------TTTTTTTTAATT-------------------------------AATTTTTTTTCTTTTCTCTTT-T-------------------------TTTTT------------ATT-------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................TAATT-------------------------------AATTTTTTTTCTTTTCTCTTT-...........................................................26110.0911000
................TT-----------------------------------------------------------------------------------------------------------T----------------T--TATCA-----------------------------------------TTATTTTATAT...................................................................................................................................................................................................................................................................20200.0511000
droYak3
ACATT-TGTCGAATATTA--------------------------------------------------------------------------------------------------------ATTTAAATGTATCTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTACTTGGTTATTTATTT-TTTT-TTTGTTTGCTTTTT-------------TTA----TTATTTATTGAATCTTCC------CT-----TTGTG------------TTA-------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................TATTTATTGAATCTTCC------CT-----TTGTG------------T...............25200.05101000000000
droEre2
CTGTT-CTTTCTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------CTTA-TTTT-----------------------TTG----CTTTTTACTTATTTT----------------TTACA------------TGT-------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 12:23 AM