ID:

dmo_140

 Coordinate:

scaffold_6540:1943746-1943806 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -33.4 -33.4

Flybase annnotation

Antisense to pre_miRNA [Dmoj\mir-iab-4-RM]; utr3 [utr3_minus_7917]; Antisense to miRNA [Dmoj\miR-iab-4-3p-RB]; Antisense to miRNA [Dmoj\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

AATGGTTATTGAAGTTTTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGCTCCTGAAAAGTGTAAAATCTCGAA

***********************************..((((....((((((.((((((((((((.((((.((....((......))..)))))).))))))))))))))))))....))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 M046

female body

 V110

male body		 V041

embryo

 V056

head

 V049

head
..................................................TTACGTATACTGAAGGTATACC......................................................................................... 22 0 1 891.00 891 655 215 9 11 1 0
..................................................TTACGTATACTGAAGGTAT............................................................................................ 19 0 1 603.00 603 2 160 427 0 8 6
..................................................TTACGTATACTGAAGGTATAC.......................................................................................... 21 0 1 595.00 595 117 465 9 4 0 0
..................................................TTACGTATACTGAAGGTATA........................................................................................... 20 0 1 147.00 147 15 107 22 3 0 0
..................................................TTACGTATACTGAAGGTATACCGG....................................................................................... 24 0 1 104.00 104 27 66 4 6 1 0
........................................................................................GGATACATTCAGTATACGTATA................................................... 22 0 1 92.00 92 88 4 0 0 0 0
..................................................TGACGTATACTGAAGGTATACC......................................................................................... 22 1 1 77.00 77 77 0 0 0 0 0
...................................................TACGTATACTGAAGGTATAC.......................................................................................... 20 0 1 54.00 54 5 49 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCG........................................................................................ 23 0 1 33.00 33 3 25 3 1 1 0
..................................................TTATGTATACTGAAGGTATACC......................................................................................... 22 1 1 30.00 30 30 0 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGTATA................................................... 23 0 1 23.00 23 22 1 0 0 0 0
........................................................................................GTATACATTCAGTATACGTATA................................................... 22 1 1 21.00 21 21 0 0 0 0 0
.................................................CTTACGTATACTGAAGGTATACC......................................................................................... 23 1 1 19.00 19 19 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGT....................................................................................... 24 1 1 16.00 16 5 1 10 0 0 0
...................................................TACGTATACTGAAGGTATACC......................................................................................... 21 0 1 16.00 16 1 15 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGTA..................................................... 21 0 1 11.00 11 9 0 0 2 0 0
..................................................TGACGTATACTGAAGGTATAC.......................................................................................... 21 1 1 10.00 10 10 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGGT...................................................................................... 25 1 1 10.00 10 1 2 7 0 0 0
..................................................TTACGTATACTGAAGGGATACC......................................................................................... 22 1 1 9.00 9 9 0 0 0 0 0
...................................................TACGTATACTGAAGGTATA........................................................................................... 19 0 1 8.00 8 0 8 0 0 0 0
...................................................TACGTATACTGAAGGTAT............................................................................................ 18 0 1 8.00 8 0 8 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGGA...................................................................................... 25 0 1 7.00 7 1 3 2 1 0 0
.......................................................................................ATGATACATTCAGTATACGTATA................................................... 23 1 1 6.00 6 6 0 0 0 0 0
...................................................TACGTATACTGAAGGTATACCGG....................................................................................... 23 0 1 5.00 5 0 5 0 0 0 0
..................................................TGATGTATACTGAAGGTATACC......................................................................................... 22 2 1 5.00 5 5 0 0 0 0 0
.................................................CGTACGTATACTGAAGGTATACC......................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
.........TGAAGTTTTCACACATCCCGC................................................................................................................................... 21 0 1 4.00 4 3 0 0 1 0 0
..................................................TTACGTATACTGAAGGTATAA.......................................................................................... 21 1 1 4.00 4 0 1 2 0 1 0
.................................................CTTACGTATACTGAAGGTATAC.......................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
.....................................................CGTATACTGAAGGTATACCGGA...................................................................................... 22 0 1 4.00 4 3 0 0 1 0 0
.........................................................................................GATACATTCAGTATACGTATAC.................................................. 22 0 1 4.00 4 4 0 0 0 0 0
..................................................TTATGTATACTGAAGGTATAC.......................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................TTACGTATACTGAAGGAATAC.......................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0
..................................................TGACGTATACTGAAGGTATACCGG....................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACA......................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0
..................................................TTACGGATACTGAAGGTATACC......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATTCC......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TTACGTATACTGAAGGTGTACC......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGT...................................................... 20 0 1 3.00 3 0 1 2 0 0 0
.......................................................................................ATGATACATTCAGTATACGTA..................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TTACGTATACTGAAGGCATAC.......................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
........................................................................................GGATACATTCAGTATACGTAT.................................................... 21 0 1 2.00 2 0 2 0 0 0 0
...............................................ATCTTACGTATACTGAAGGTATACC......................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0
..................................................TTACGTATACTGAAGGGAT............................................................................................ 19 1 1 2.00 2 0 0 2 0 0 0
.........................................................................................GATACATTCAGTATACGTATA................................................... 21 0 1 2.00 2 1 1 0 0 0 0
................................................TCTTACGTATACTGAAGGTATACC......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................TTACGTATACTGCAGGTATACC......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTACGTATACTGAAGGCAT............................................................................................ 19 1 1 2.00 2 0 0 2 0 0 0
..................................................TGACGTATACTGAAGGTATA........................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..................................................TTACGTATACTCAAGGTATACC......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
.................................................CTTACGTATACTAAAGGTATACC......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGTAT.................................................... 22 0 1 2.00 2 0 2 0 0 0 0
..................................................TTACTTATACTGAAGGTATACC......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GTACGTATACTGAAGGTATACC......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
........................................................................................GGATACATTCAGTATACGTAC.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TGATGTATACTGAAGGTATAC.......................................................................................... 21 2 2 1.50 3 3 0 0 0 0 0
..................................................TTACGTATATTGAAGGAATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGCAGGTATACG......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................CGTACGTATACTGAAGGTATAC.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGACGTACACTGAAGGTATAC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTAC............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTTAAGGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTAGAC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAATGTAT............................................................................................ 19 1 3 1.00 3 0 0 3 0 0 0
....................................................ACGTATACTGAAGGTATA........................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
..................................................CTACGGATACTGAAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACG......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTATGTATACTGAAGGTATACA......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CTACGTATACTGAAGGTATACCG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGACGTATACTGAAGGTATACCGGC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
......................................................GTATACTGAAGGTATACC......................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
................................................TGTTACGTACACTGAAGGTAT............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TCACGTATACTGAAGGTATAC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.................................................CTTACGTATACTGAAGGTAT............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TGACGTACACTGAAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATAT.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
........................................................................................GGATACATTCAGTATACGTATT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................CTTACGTATACTGAAGGTATA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGCAGGTATA........................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGCATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTCAAGGTATAC.......................................................................................... 21 1 2 1.00 2 0 2 0 0 0 0
..................................................TTACGTATACTGAAGGTGTAC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................TGCTACGTATACTGAAGGTATACC......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........................................................................................GGATACATTCAGTATACGTTTA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAGGGTAT............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGGTATACCGGTA..................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
.........................................................................GATAGGATACACTCAGGATACATTCAGT............................................................ 28 0 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGTTATAC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................AGGATACCTTCAGTATGCGTATA................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.................................................CTTACGTATACTGAAGGAATACC......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
....................................................ACGTATACTGAAGGTATACCGG....................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.................................................CTTACGTATACTGAAGGTATGCC......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTATGTATACTGAAGGTATACCGG....................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTAAACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................................................TACGTATACTGAAGGAAT............................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0
........................................................................................GGATACATTCAGTATACGGATA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................GTTACGTATACTGAAGGTATAC.......................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..................................................TTACCTATACTGAAGGTATAC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTGTACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGAATT................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTTTAC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................ATAGGATACACTCAGGAT..................................................................... 18 0 1 1.00 1 0 0 0 0 0 1
.......................................................................................AGCATACATTCAGTATACGTATA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGCATACCGG....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAACGCATACC......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TTACGTATACTGAAGGGATACCGT....................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAAGTATAC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACTTATACTGAAGGTATACCGG....................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTTC............................................................................................ 19 2 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGGGATACCG........................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0
..................................................TGACGTATACTGAAGGTAC............................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAGGGTATACCGG....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................ATGATACATTCAGTATACGTAC.................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................ATGTTACATTCAGTATACGTATA................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATGCTGAAGGGATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGGAGGTATA........................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACCGAAGGTAT............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTTTACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTCGTATACTGAAGGTAT............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
........................................................................................GGATACATTCAGTATACGT...................................................... 19 0 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCTG....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.................................................CTCACGTATACTGAAGGTATAC.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................GATACATTCAGTATACGTATAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTAAAGGTATACCGG....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
....................................................................................CTCAGGATACATTCAGTA........................................................... 18 0 1 1.00 1 0 0 1 0 0 0
........................................................ATACTGAAGGTATACCGGT...................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTGTACTGAAGGTAT............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
.........................CCCGCGTTGCTGGTGTTTCCTCGTG............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..................................................TTACGCATACTGAAGGGATACC......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TGACGTATACTGAAGGTATGC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................CTCAGGATACATTCAGTATACGTATA................................................... 26 0 1 1.00 1 0 0 1 0 0 0
..................................................TGACGGATACTGAAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................GATACATTCAGTATACGTAT.................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...................................................................ATACCGGATAGGATACACTCAGGAT..................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
................................................TGTTACGTATACTGAAGGTAT............................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
...................................................TACGTATACTGAAGGCATAC.......................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................AGGATACATTCAGCATACGTAT.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTATGTATACTGAAGGTATACCG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAGGGTATA........................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
..................................................TTACGTATACTGAAGGTATACCT........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..............................................GATCTTACGTATACTGAAGGTATACC......................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................ATACAGTCAGTATACGTATACG................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGGTTGA................................................................................... 28 3 1 1.00 1 0 0 1 0 0 0
...................ACACATCCCGCGTTGATGAG.......................................................................................................................... 20 3 1 1.00 1 0 0 0 0 0 1
..................................................TTACGGATACTGAAGGTATACCGC....................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
....................................................................................ATAAGGATACATTCAGTATACGTATA................................................... 26 2 1 1.00 1 1 0 0 0 0 0
.........................................................................GATAGGATACACTCAGGATAC................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................TTACGGATACTGCAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGACGTGTACTGAAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGAATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACGGTAT..................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
...............................................ATCTTACGTATACTGAAGGCATACC......................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
..................................................TGATGTATACTGAAGGTATACCGG....................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
........................................................................................GGATACATTCAGTATACGCATA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGGATA........................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACTTATACTGAAGGTAT............................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
..................................................TGACGTATATTGAAGGTATACC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................AAGATACCTTCAGTATACGTATA................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGTTAT............................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAAGGTA............................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
...................................................TACGTATACTGAAGGTATACCG........................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0
........................................................................................GGATACATTCAGTATACGGAT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTAGACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................ATACGTATACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAATGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGACGTATACTGATGGGATACCGG....................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..............................................CGTGTTACGTATACTGAAGGTATAC.......................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
..................................................CTACGTATACTGAAGGTATACC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................CGGATACATTCAGTATACGTATA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................GGATACATTAAGTATACGTATA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGGAGGTATACCGGT...................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
.......................................................................................AAGATACATTCAGTATACGTATA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.................................................TTTACGTATACTGAAGGTATA........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...............................................CTCTTACGTATACTGAAGGTATACC......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTTAAGGTATAC.......................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
.................TCACACACCCGGCGTTGCTCG........................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
..................................................TTACGTATACTGTAGGTAT............................................................................................ 19 1 2 0.50 1 0 0 1 0 0 0
..................................................TTACGTATACTGGAGGTATCCCT........................................................................................ 23 3 2 0.50 1 0 0 0 1 0 0
........................................................................................TTATACATTCAGTATACGTATA................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................TTGCGTATACTGAAGGTATAC.......................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
..................................................TTACGTATACTGAATGTATA........................................................................................... 20 1 2 0.50 1 0 1 0 0 0 0
....................................................ACGTATACTGAATGTATAC.......................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0
..................................................TTACGTATACTGAATGTATCCC......................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................TGATGTATACTCAAGGTATACC......................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0
...............................TTGCTGGTGTTTCATAGTG............................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0
..................................................TTACGGATACGGAAGGTAT............................................................................................ 19 2 4 0.25 1 0 0 0 0 1 0

Anti-sense strand reads

TTACCAATAACTTCAAAAGTGTGTAGGGCGCAACGACCACAAAGGAGCACAATGCATATGACTTCCATATGGCCTATCCTATGTGAGTCCTATGTAAGTCATATGCATATGCTTCAACGTGTCCGAGTTGTTAAGCGAGGACTTTTCACATTTTAGAGCTT

************************************..((((....((((((.((((((((((((.((((.((....((......))..)))))).))))))))))))))))))....))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 M046

female body

 V041

embryo

 V056

head
.....................................................................................AGTCCTATGTAAGTCATATGCA...................................................... 22 0 1 13359.00 13359 12481 680 197 1
......................................................................................GTCCTATGTAAGTCATATGCA...................................................... 21 0 1 937.00 937 350 565 22 0
........................................................................................CCTATGTAAGTCATATGCA...................................................... 19 0 1 784.00 784 778 6 0 0
.....................................................................................AGTCCTATGTAAGTCATATGGA...................................................... 22 1 1 566.00 566 566 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATCCA...................................................... 22 1 1 359.00 359 359 0 0 0
.....................................................................................AGTCCTATGTAAGTCATAGGCA...................................................... 22 1 1 180.00 180 180 0 0 0
.....................................................................................AGTCCTATGTAAGTCATACGCA...................................................... 22 1 1 174.00 174 172 0 2 0
.....................................................................................AGTCCTATGTAAGTCATATGC....................................................... 21 0 1 170.00 170 102 67 1 0
.................................................CAATGCATATGACTTCCATATGGC........................................................................................ 24 0 1 147.00 147 145 0 2 0
................................................TCAATGCATATGACTTCCATAT........................................................................................... 22 1 1 137.00 137 132 1 4 0
.......................................................................................TCCTATGTAAGTCATATGCA...................................................... 20 0 1 125.00 125 78 40 7 0
....................................................................................TAGTCCTATGTAAGTCATATGC....................................................... 22 1 1 124.00 124 112 4 8 0
.....................................................................................AGTCCTATGTAAGTCATATGTA...................................................... 22 1 1 120.00 120 120 0 0 0
.....................................................................................AGTCCTATGTAAGTCATAAGCA...................................................... 22 1 1 114.00 114 114 0 0 0
.........................................................................................CTATGTAAGTCATATGCA...................................................... 18 0 1 108.00 108 107 1 0 0
....................................................................................AAGTCCTATGTAAGTCATATGCA...................................................... 23 1 1 104.00 104 102 2 0 0
.................................................CAATGCATATGACTTCCATAT........................................................................................... 21 0 1 82.00 82 80 0 2 0
....................................................................................TAGTCCTATGTAAGTCATATGCA...................................................... 23 1 1 81.00 81 76 2 3 0
.....................................................................................AGTCCTATGTACGTCATATGCA...................................................... 22 1 1 74.00 74 73 1 0 0
......................................................................................GTCCTATGTAAGTCATATGC....................................................... 20 0 1 70.00 70 0 70 0 0
....................................................................................CAGTCCTATGTAAGTCATATGCA...................................................... 23 1 1 68.00 68 68 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATGC....................................................... 22 1 1 67.00 67 65 0 2 0
....................................................................................AAGTCCTATGTAAGTCATATGC....................................................... 22 1 1 65.00 65 58 3 4 0
.....................................................................................AGTCCTATGTAAGTCATATGCT...................................................... 22 1 1 54.00 54 53 0 1 0
.....................................................................................AGTCCTATGTAAGTCATATTCA...................................................... 22 1 1 45.00 45 45 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATGC....................................................... 23 1 1 43.00 43 35 5 3 0
.....................................................................................CGTCCTATGTAAGTCATATGCA...................................................... 22 1 1 41.00 41 39 1 1 0
................................................CCAATGCATATGACTTCCATAT........................................................................................... 22 1 1 34.00 34 34 0 0 0
.....................................................................................AGTCCTAAGTAAGTCATATGCA...................................................... 22 1 1 33.00 33 33 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATTC....................................................... 21 1 1 33.00 33 33 0 0 0
................................................ACAATGCATATGACTTCCATAT........................................................................................... 22 0 1 32.00 32 24 5 3 0
.....................................................................................AGTCCTATGTAAGTAATATGCA...................................................... 22 1 1 32.00 32 32 0 0 0
....................................................................................TAGTCCTATGTAAGTCATATTC....................................................... 22 2 1 32.00 32 32 0 0 0
.....................................................................................AGTCCTATGTAAATCATATGCA...................................................... 22 1 1 31.00 31 30 0 1 0
.....................................................................................AGTCCTACGTAAGTCATATGCA...................................................... 22 1 1 29.00 29 29 0 0 0
.....................................................................................TGTCCTATGTAAGTCATATGCA...................................................... 22 1 1 29.00 29 23 5 1 0
.................................................CAATGCATATGACTTCCATATGTC........................................................................................ 24 1 1 28.00 28 28 0 0 0
.....................................................................................AGTCCTATGTAAGTCAGATGCA...................................................... 22 1 1 28.00 28 28 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATTC....................................................... 22 2 1 25.00 25 25 0 0 0
.......................................................................................CCCTATGTAAGTCATATGCA...................................................... 20 1 1 24.00 24 24 0 0 0
.....................................................................................AGTCCTATTTAAGTCATATGCA...................................................... 22 1 1 23.00 23 20 2 1 0
...................................................................................TTAGTCCTATGTAAGTCATATGCA...................................................... 24 1 1 23.00 23 20 2 1 0
...................................................................................TCAGTCCTATGTAAGTCATATGC....................................................... 23 1 1 23.00 23 23 0 0 0
.....................................................................................AGTCCTATGTAAGTCATTTGCA...................................................... 22 1 1 23.00 23 23 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATG........................................................ 20 0 1 22.00 22 16 5 1 0
.....................................................................................ATTCCTATGTAAGTCATATGCA...................................................... 22 1 1 21.00 21 21 0 0 0
......................................................................................GTCCTATGTAAGTCATATGGA...................................................... 21 1 1 21.00 21 21 0 0 0
.....................................................................................AGTCCTATGTAAGTCATACGC....................................................... 21 1 1 20.00 20 20 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCAC..................................................... 23 1 1 19.00 19 19 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATGCA...................................................... 24 1 1 19.00 19 18 0 1 0
....................................................................................TAGTCCTATGTAAGTCATACGC....................................................... 22 2 1 19.00 19 19 0 0 0
.....................................................................................AGTCCTATGTAAGTCGTATGCA...................................................... 22 1 1 19.00 19 18 0 1 0
.....................................................................................GGTCCTATGTAAGTCATATGCA...................................................... 22 1 1 18.00 18 15 2 1 0
.....................................................................................AGTTCTATGTAAGTCATATGCA...................................................... 22 1 1 14.00 14 14 0 0 0
................................................TCAATGCATATGACTTCCATATGGC........................................................................................ 25 1 1 14.00 14 14 0 0 0
.....................................................................................AGTCCTATCTAAGTCATATGCA...................................................... 22 1 1 14.00 14 13 0 1 0
......................................................................................GTCCTATGTAAGTCATATCCA...................................................... 21 1 1 14.00 14 14 0 0 0
.....................................................................................AGTCCTATGTAAGCCATATGCA...................................................... 22 1 1 13.00 13 13 0 0 0
...................................................................................AAAGTCCTATGTAAGTCATAT......................................................... 21 2 1 13.00 13 13 0 0 0
........................................................................................CTTATGTAAGTCATATGCA...................................................... 19 1 1 13.00 13 13 0 0 0
........................................................................................CCTATGTAAGTCATATGGA...................................................... 19 1 1 12.00 12 12 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATTC....................................................... 23 2 1 12.00 12 12 0 0 0
.....................................................................................AATCCTATGTAAGTCATATGCA...................................................... 22 1 1 12.00 12 12 0 0 0
....................................................................................CAGTCCTATGTAAGTCATACGC....................................................... 22 2 1 12.00 12 12 0 0 0
.....................................................................................AGCCCTATGTAAGTCATATGCA...................................................... 22 1 1 12.00 12 12 0 0 0
....................................................TGCATATGACTTCCATATGGC........................................................................................ 21 0 1 11.00 11 6 2 3 0
....................................................................................AAGTCCTATGTAAGTCATATTC....................................................... 22 2 1 11.00 11 11 0 0 0
.....................................................GCATATGACTTCCATATGGC........................................................................................ 20 0 1 11.00 11 0 11 0 0
.....................................................................................AGTCTTATGTAAGTCATATGCA...................................................... 22 1 1 11.00 11 11 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATGCA...................................................... 24 1 1 10.00 10 9 0 1 0
...................................................................................AAAGTCCTATGTAAGTCATATGC....................................................... 23 2 1 10.00 10 10 0 0 0
.....................................................................................AGTCCCATGTAAGTCATATGCA...................................................... 22 1 1 10.00 10 9 0 1 0
...................................................................................CCAGTCCTATGTAAGTCATATGC....................................................... 23 2 1 10.00 10 10 0 0 0
......................................................................................GTCCTATGTAAGTCATATG........................................................ 19 0 1 9.00 9 1 8 0 0
........................................................................................CCTATGTAAGTCATATGC....................................................... 18 0 1 9.00 9 8 1 0 0
.....................................................................................AGTCCTATGTAATTCATATGCA...................................................... 22 1 1 9.00 9 8 1 0 0
.....................................................................................AGTCCTATGTAAGTCATA.......................................................... 18 0 1 9.00 9 9 0 0 0
...................................................................................CTAGTCCTATGTAAGTCATATGCA...................................................... 24 2 1 8.00 8 8 0 0 0
........................................................................................CCTATGTAAGTCATATGTA...................................................... 19 1 1 8.00 8 8 0 0 0
.....................................................................................AGTCCTATGTGAGTCATATGCA...................................................... 22 1 1 8.00 8 5 3 0 0
......................................................................................GTCCTATGTAAGTCATAGGCA...................................................... 21 1 1 8.00 8 8 0 0 0
...................................................ATGCATATGACTTCCATATGGC........................................................................................ 22 0 1 8.00 8 6 2 0 0
....................................................................................TAGTCCTATGTAAGTCATTTGC....................................................... 22 2 1 8.00 8 8 0 0 0
....................................................................................TAGTCCTATGTAAGTCATACTC....................................................... 22 3 1 7.00 7 7 0 0 0
........................................................................................CCTATGTAAGTCATACGCA...................................................... 19 1 1 7.00 7 7 0 0 0
.....................................................................................AGTCCTATATAAGTCATATGCA...................................................... 22 1 1 7.00 7 6 1 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCG...................................................... 22 1 1 7.00 7 7 0 0 0
........................................................................................CCTATTTAAGTCATATGCA...................................................... 19 1 1 7.00 7 7 0 0 0
.................................................CAATGCATATGACTTCCATATCGC........................................................................................ 24 1 1 7.00 7 7 0 0 0
................................................TCAATGCATATGACTTCCATATGTC........................................................................................ 25 2 1 7.00 7 7 0 0 0
.....................................................................................AGTCCTATGTAAGTCATAT......................................................... 19 0 1 7.00 7 4 3 0 0
.....................................................................................AGTCCTATGTAAGTCATTTGC....................................................... 21 1 1 7.00 7 7 0 0 0
....................................................................................AAGTCCTATGTAAGTCATACGC....................................................... 22 2 1 6.00 6 6 0 0 0
.....................................................................................AGTCCTTTGTAAGTCATATGCA...................................................... 22 1 1 6.00 6 6 0 0 0
................................................CCAATGCATATGACTTCCATATGGC........................................................................................ 25 1 1 6.00 6 6 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGAA...................................................... 22 1 1 6.00 6 4 0 2 0
...................................................................................TAAGTCCTATGTAAGTCATATGC....................................................... 23 1 1 6.00 6 6 0 0 0
........................................................................................CCTATGTAAGTCATATCCA...................................................... 19 1 1 6.00 6 6 0 0 0
........................................................................................CCTATGTAAGTCATAGGCA...................................................... 19 1 1 5.00 5 5 0 0 0
...............................................CACAATGCATATGACTTCCATAT........................................................................................... 23 0 1 5.00 5 4 0 1 0
.....................................................................................AGTCCTATGTAAGTCATAGG........................................................ 20 1 1 5.00 5 5 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATTC....................................................... 23 2 1 5.00 5 5 0 0 0
.....................................................................................AGACCTATGTAAGTCATATGCA...................................................... 22 1 1 5.00 5 5 0 0 0
.....................................................................................AGTCCTATGTCAGTCATATGCA...................................................... 22 1 1 5.00 5 4 0 1 0
.....................................................................................AGTCCTATGTAACTCATATGCA...................................................... 22 1 1 5.00 5 4 1 0 0
......................................................................................TTCCTATGTAAGTCATATGCA...................................................... 21 1 1 5.00 5 3 2 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACTA................................................... 25 3 1 5.00 5 5 0 0 0
....................................................................................CAGTCCTATGTAAGTCATTTGC....................................................... 22 2 1 5.00 5 5 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATACA...................................................... 22 1 1 5.00 5 4 0 1 0
.....................................................................................AGTCCTATGTAAGTCATATCA....................................................... 21 2 1 4.00 4 4 0 0 0
.....................................................................................CGTCCGATGTAAGTCATATGCA...................................................... 22 2 1 4.00 4 4 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATAT......................................................... 21 1 1 4.00 4 4 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATACGC....................................................... 23 2 1 4.00 4 4 0 0 0
......................................................................................GTCCTATGTGAGTCATATGCA...................................................... 21 1 1 4.00 4 1 3 0 0
................................................TCAATGCATATGACTTCCTTAT........................................................................................... 22 2 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTATGTCATATGCA...................................................... 22 1 1 4.00 4 3 1 0 0
....................................................................................AAGTCCTATGTAAGTCATATGGA...................................................... 23 2 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAAGTCACATGCA...................................................... 22 1 1 4.00 4 4 0 0 0
.......................................................................................TCCTATGTAAGTCATATCCA...................................................... 20 1 1 4.00 4 4 0 0 0
.......................................................................................TCCTATGTAAGTCATATGC....................................................... 19 0 1 4.00 4 0 4 0 0
........................................................................................CCTATCTAAGTCATATGCA...................................................... 19 1 1 4.00 4 4 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATGGA...................................................... 23 2 1 4.00 4 4 0 0 0
........................................................................................CCTATGTAAGTCATATGCATAT................................................... 22 0 1 4.00 4 3 1 0 0
.......................................................................................TCCTATGTAAGTCATATGCATA.................................................... 22 0 1 4.00 4 4 0 0 0
.................................................CAATGCATATGACTTCCTTAT........................................................................................... 21 1 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAAGTTATATGCA...................................................... 22 1 1 4.00 4 3 0 1 0
.....................................................................................AGTCGTATGTAAGTCATATGCA...................................................... 22 1 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAAGTAATATGGA...................................................... 22 2 1 4.00 4 4 0 0 0
.................................................CAATGCATATGACTTCCATATGG......................................................................................... 23 0 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACTAG.................................................. 26 3 1 4.00 4 4 0 0 0
....................................................................................TTGTCCTATGTAAGTCATATGC....................................................... 22 2 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATA........................................................ 20 1 1 4.00 4 4 0 0 0
......................................................................................GTCCTATGTAAGTCATACGCA...................................................... 21 1 1 4.00 4 4 0 0 0
....................................................................................AAGTCCTATGTAAGTCATAAGCA...................................................... 23 2 1 4.00 4 4 0 0 0
.................................................CAATGCATATGACTTCCATA............................................................................................ 20 0 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTGTGTAAGTCATATGCA...................................................... 22 1 1 4.00 4 3 1 0 0
....................................................................................GAGTCCTATGTAAGTCATATGCA...................................................... 23 0 1 4.00 4 4 0 0 0
.....................................................................................AGTCCTATGTAGGTCATATGCA...................................................... 22 1 1 4.00 4 3 1 0 0
...................................................................................AAAGTCCTATGTAAGTCATATGCA...................................................... 24 2 1 4.00 4 4 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATTC....................................................... 23 2 1 4.00 4 4 0 0 0
........................................................................................CCTACGTAAGTCATATGCA...................................................... 19 1 1 3.00 3 3 0 0 0
................................................TCAATGCATATGACTTCCACAT........................................................................................... 22 2 1 3.00 3 3 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACTAGC................................................. 27 3 1 3.00 3 3 0 0 0
.....................................................................................AGTCCTATGTAAGTCATTCGC....................................................... 21 2 1 3.00 3 3 0 0 0
....................................................................................TAGTCCTATGTAAGTCATAGGCA...................................................... 23 2 1 3.00 3 3 0 0 0
...............................................CACAATGCATATGACTTCCATA............................................................................................ 22 0 1 3.00 3 3 0 0 0
....................................................................................AAGTCCTATGTAAGTCATATG........................................................ 21 1 1 3.00 3 3 0 0 0
...................................................................................CTAGTCCTATGTAAGTCATATGC....................................................... 23 2 1 3.00 3 3 0 0 0
...................................................ATGCATATGACTTCCATATGTC........................................................................................ 22 1 1 3.00 3 3 0 0 0
...................................................................................TGAGTCCTATGTAAGTCATATGCA...................................................... 24 0 1 3.00 3 3 0 0 0
.....................................................................................AGTCCTACGTAAGTCATATGGA...................................................... 22 2 1 3.00 3 3 0 0 0
........................................................................................CCTATGTACGTCATATGCA...................................................... 19 1 1 3.00 3 3 0 0 0
.................................................CAATGCATATGACTTCCATATG.......................................................................................... 22 0 1 3.00 3 2 1 0 0
...................................................................................TTAGTCCTATGTAAGTCATATG........................................................ 22 1 1 3.00 3 2 1 0 0
......................................................................................GTCCTATGTAAGTCATATGTA...................................................... 21 1 1 3.00 3 3 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATG........................................................ 21 1 1 3.00 3 2 1 0 0
...................................................................................ATAGTCCTATGTAAGTCATATGCA...................................................... 24 2 1 3.00 3 3 0 0 0
.....................................................................................TGTCCTATGTAAGTCATATGGA...................................................... 22 2 1 3.00 3 3 0 0 0
...................................................................................CCAGTCCTATGTAAGTCATATGCA...................................................... 24 2 1 3.00 3 3 0 0 0
.....................................................................................AGTCCTAGGTAAGTCATATGCA...................................................... 22 1 1 3.00 3 2 0 1 0
.....................................................................................AGTCCGATGTAAGTAATATGCA...................................................... 22 2 1 3.00 3 3 0 0 0
......................................................................................GTCCTAAGTAAGTCATATGCA...................................................... 21 1 1 3.00 3 3 0 0 0
.....................................................................................AGTCCGATGTAAGTCATATGCA...................................................... 22 1 1 3.00 3 3 0 0 0
...................................................................................AAAGTCCTATGTAAGTCATATG........................................................ 22 2 1 3.00 3 3 0 0 0
....................................................................................TAGTCCTATGTAAGTCATATCCA...................................................... 23 2 1 3.00 3 3 0 0 0
.....................................................................................AGTCCTATGTAAGTCATGTGCA...................................................... 22 1 1 3.00 3 3 0 0 0
......................................................................................GTCCTATGTAAGTCATATGCAT..................................................... 22 0 1 3.00 3 1 1 1 0
.....................................................................................AGTCCTATGTCAGTCATATGC....................................................... 21 1 1 3.00 3 3 0 0 0
....................................................................................TAGTCCTATGTAAGTCATATGGA...................................................... 23 2 1 3.00 3 3 0 0 0
.....................................................................................GGTCCTATGTAAGTCATATGGA...................................................... 22 2 1 3.00 3 3 0 0 0
......................................................................................GTCCTATGTAAGTCATATGCAG..................................................... 22 1 1 3.00 3 0 3 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACT.................................................... 24 2 1 3.00 3 3 0 0 0
.....................................................................................AGTTCTATGTAAGTCATATGGA...................................................... 22 2 1 3.00 3 3 0 0 0
......................................................................................GTCCTATGTAAGTCATAAGCA...................................................... 21 1 1 3.00 3 3 0 0 0
.....................................................................................CGTCCTATGTAAGTCATATCCA...................................................... 22 2 1 3.00 3 3 0 0 0
....................................................................................GAGTCCTATGTAAGTCATATGC....................................................... 22 0 1 3.00 3 2 0 1 0
................................................TCAATGCATATGACTTCCATGT........................................................................................... 22 2 1 3.00 3 3 0 0 0
....................................................................................AAGTCCTATGTAAGTCATTTGC....................................................... 22 2 1 3.00 3 3 0 0 0
........................................................................................CCTATGTAAGTCATATGCACTAG.................................................. 23 3 1 2.00 2 2 0 0 0
................................................TCAATGCATATGAATTCCATAT........................................................................................... 22 2 1 2.00 2 2 0 0 0
.....................................................................................CGTCCTATGTACGTCATATGCA...................................................... 22 2 1 2.00 2 2 0 0 0
.................................................CAATGCATATGACTTCCATACGGC........................................................................................ 24 1 1 2.00 2 2 0 0 0
....................................................................................AAGTCCTATGTAAGTCATACGCA...................................................... 23 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATACTC....................................................... 21 2 1 2.00 2 2 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATTTGC....................................................... 23 2 1 2.00 2 2 0 0 0
......................................................................................GTCCTATGTAAGTCATATTCA...................................................... 21 1 1 2.00 2 1 1 0 0
.....................................................................................AGTCCTATGTACGTCATATGGA...................................................... 22 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTAAGTAAGTCATATGGA...................................................... 22 2 1 2.00 2 2 0 0 0
....................................................CGCATATGACTTCCATATGGC........................................................................................ 21 1 1 2.00 2 2 0 0 0
....................................................................................TAGTCCTATGTAAGTCATTTTC....................................................... 22 3 1 2.00 2 2 0 0 0
................................................TCAATGCATATGACTTCCATTT........................................................................................... 22 2 1 2.00 2 2 0 0 0
.........................................................................................CTATGTAAGTCATATCCA...................................................... 18 1 1 2.00 2 2 0 0 0
......................................................................................CTCCTATGTAAGTCATATGCA...................................................... 21 1 1 2.00 2 1 1 0 0
....................................................................................AAGTCCTATGTAAGTCATACTC....................................................... 22 3 2 2.00 4 4 0 0 0
........................................................................................CCTATGTAAGTCATATTC....................................................... 18 1 1 2.00 2 2 0 0 0
......................................................................................GTCCTATGTAAGTCATATGCAA..................................................... 22 1 1 2.00 2 0 2 0 0
................................................CCAATGCATATGACTTCCACAT........................................................................................... 22 2 1 2.00 2 2 0 0 0
................................................TCAATGCATACGACTTCCATAT........................................................................................... 22 2 1 2.00 2 2 0 0 0
.......................................................................................TCCTATGTAAGTCATATGGA...................................................... 20 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATCGA...................................................... 22 2 1 2.00 2 2 0 0 0
.......................................................................................TCCTATGTAAGTCATATGTA...................................................... 20 1 1 2.00 2 2 0 0 0
................................................TCAATGCATATGACTTCCATATC.......................................................................................... 23 2 1 2.00 2 2 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATGGA...................................................... 24 2 1 2.00 2 2 0 0 0
......................................................................................GTCCTATGTCAGTCATATGCA...................................................... 21 1 1 2.00 2 0 2 0 0
.................................................CAATGCATATGACTTCAATATCGC........................................................................................ 24 2 1 2.00 2 2 0 0 0
......................................................................................GTCCTATGTAAGACATATGCA...................................................... 21 1 1 2.00 2 2 0 0 0
......................................................................................GTCCTATGTACGTCATATGCA...................................................... 21 1 1 2.00 2 1 0 1 0
.................................................CAATGCATATGACTTCCATATGGT........................................................................................ 24 1 1 2.00 2 2 0 0 0
................................................TCAATGCATATGACTTCCATA............................................................................................ 21 1 1 2.00 2 0 2 0 0
.......................................................................................TCCTATGTAAGTCATAGGCA...................................................... 20 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCAT..................................................... 23 0 1 2.00 2 0 2 0 0
...................................................................................TTTGTCCTATGTAAGTCATATGC....................................................... 23 2 1 2.00 2 0 0 2 0
.....................................................................................AGTCCTAGGTAAGTCATATGC....................................................... 21 1 1 2.00 2 2 0 0 0
........................................................................................CCTATGTAAGTAATATGCA...................................................... 19 1 1 2.00 2 2 0 0 0
................................................CCAATGCATATGACTTCCTTAT........................................................................................... 22 2 1 2.00 2 2 0 0 0
........................................................................................CCTAAGTAAGTCATATGCA...................................................... 19 1 1 2.00 2 2 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATTTGC....................................................... 23 2 1 2.00 2 2 0 0 0
.................................................CAATGCATATGACTTCCATATC.......................................................................................... 22 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAGGTCATATGGA...................................................... 22 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATCGG........................................................ 20 2 1 2.00 2 2 0 0 0
...................................................................................ATAGTCCTATGTAAGTCATATGC....................................................... 23 2 1 2.00 2 2 0 0 0
.......................................................................................TCCTATGTAAGTCATATGCAGA.................................................... 22 1 1 2.00 2 2 0 0 0
........................................................................................CCCATGTAAGTCATATGCA...................................................... 19 1 1 2.00 2 2 0 0 0
.....................................................................................CGTCCTATGTAAGTAATATGCA...................................................... 22 2 1 2.00 2 2 0 0 0
......................................................................................GTCCTATCTAAGTCATATGCA...................................................... 21 1 1 2.00 2 2 0 0 0
.....................................................................................GGTCCTATGTAAGTCATATCCA...................................................... 22 2 1 2.00 2 2 0 0 0
.................................................CAATGCATATGACTTCCACAT........................................................................................... 21 1 1 2.00 2 2 0 0 0
...................................................................................ACAGTCCTATGTAAGTCATATGC....................................................... 23 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATTTAAGTCATAGGCA...................................................... 22 2 1 2.00 2 2 0 0 0
...................................................................................CAAGTCCTATGTAAGTCATATTC....................................................... 23 3 1 2.00 2 2 0 0 0
.....................................................................................CGTCCTATGTAAGTCATAGGCA...................................................... 22 2 1 2.00 2 2 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATAAGCA...................................................... 24 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATTTGGA...................................................... 22 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATTTAAGTCATATCCA...................................................... 22 2 1 2.00 2 2 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATG........................................................ 22 1 1 2.00 2 2 0 0 0
................................................ACAATGCATATGACTTCCATA............................................................................................ 21 0 1 2.00 2 1 1 0 0
..................................................CATGCATATGACTTCCATATGGC........................................................................................ 23 1 1 2.00 2 2 0 0 0
...................................................CTGCATATGACTTCCATATGGC........................................................................................ 22 1 1 2.00 2 1 1 0 0
..................................................AATGCATATGACTTCCATATGGC........................................................................................ 23 0 1 2.00 2 2 0 0 0
......................................................................................GTTCTATGTAAGTCATATGCA...................................................... 21 1 1 2.00 2 2 0 0 0
...................................................................................CCAGTCCTATGTAAGTCATATG........................................................ 22 2 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATT........................................................ 20 1 1 2.00 2 2 0 0 0
.................................................CAATGCATATGACTTCCATATTG......................................................................................... 23 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAATCATATGC....................................................... 21 1 1 2.00 2 1 1 0 0
....................................................................................TAGTCCTATGTAAGTCATATGTA...................................................... 23 2 1 2.00 2 2 0 0 0
...................................................................................AAAGTCCTATGTAAGTCATATTC....................................................... 23 3 1 2.00 2 2 0 0 0
..................................................................................TTAAGTCCTATGTAAGTCATATGCA...................................................... 25 2 1 2.00 2 1 1 0 0
........................................................................................CCTATGTAAGTCATATGCAC..................................................... 20 1 1 2.00 2 2 0 0 0
................................................ACAATGCATATGACTTCCATGT........................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................................................CAAAGTCCTATGTAAGTCATATG........................................................ 23 3 1 1.00 1 1 0 0 0
....................................................................................AAGTCCTATGTAAGTAATACGCA...................................................... 23 3 1 1.00 1 1 0 0 0
....................................................................................TAGTCCTATGTAAGTCATTCGC....................................................... 22 3 1 1.00 1 1 0 0 0
.................................................CAATGCATATGCCTTCCATATGGC........................................................................................ 24 1 1 1.00 1 1 0 0 0
................................................................................................................TTCAACGTGTCCGAGTTGTTA............................ 21 0 1 1.00 1 1 0 0 0
.................................................CAATCCATATGACTTCCATAT........................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATGGA...................................................... 24 2 1 1.00 1 1 0 0 0
.......................................................................................TCCTATGTAAGTCATATGCACTAGC................................................. 25 3 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATGTGGA...................................................... 22 2 1 1.00 1 1 0 0 0
................................................TCAATGCATATGACTTCCATAGGGC........................................................................................ 25 2 1 1.00 1 1 0 0 0
...................................................................................ACAGTCCTATGTAAGTCATATCCA...................................................... 24 3 1 1.00 1 1 0 0 0
......................................................CATATGACTTCCATATGG......................................................................................... 18 0 1 1.00 1 0 1 0 0
................................................CCAATGCATATGACTTCCAGA............................................................................................ 21 2 1 1.00 1 1 0 0 0
......................................................................................GTCCTATGTAAGTCATATGCAC..................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................CTTCCTATGTAAGTAATATGCA...................................................... 22 3 1 1.00 1 1 0 0 0
.....................................................GCATATGACTTCCATATGGCCT...................................................................................... 22 0 1 1.00 1 0 0 1 0
......................................................................................GTTCTATGTAAGTCATATGCAC..................................................... 22 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATATAAGTCATATGTA...................................................... 22 2 1 1.00 1 1 0 0 0
................................................TCAATGCATCTGACTTCCATAT........................................................................................... 22 2 1 1.00 1 1 0 0 0
......................................................................................GTCTTATGTAAGTCATATGCA...................................................... 21 1 1 1.00 1 1 0 0 0
...................................................................................TTAGGCCTATGTAAGTCATATTC....................................................... 23 3 1 1.00 1 1 0 0 0
.....................................................................................AGTTCTATGTAAGTCATATGTA...................................................... 22 2 1 1.00 1 1 0 0 0
................................................CCAATGCATATGACTTCCATAG........................................................................................... 22 2 1 1.00 1 1 0 0 0
...................................................................................TCAGTCCTATTTAAGTCATATGCA...................................................... 24 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCATATGTAAGTCATATGAA...................................................... 22 2 1 1.00 1 0 0 1 0
.....................................................................................AGTCCTATGTACGTCATACGCA...................................................... 22 2 1 1.00 1 1 0 0 0
...................................................................................GAAGTCCTATGTAAGTCATATGCA...................................................... 24 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACGA................................................... 25 3 1 1.00 1 1 0 0 0
.................................................CAATGCATATGACTTCCATATGGCCTATC................................................................................... 29 0 1 1.00 1 1 0 0 0
................................................TCAATGCATATGACTTCCATATGGCGT...................................................................................... 27 2 1 1.00 1 1 0 0 0
.........................................................................................CTATGTAAGTCATACGCA...................................................... 18 1 1 1.00 1 1 0 0 0
.....................................................................................AGGCCTATGTAAGTCATATGGA...................................................... 22 2 1 1.00 1 1 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATGT....................................................... 23 2 1 1.00 1 1 0 0 0
...................................................................................CGAGTCCTATGTAAGTCATATG........................................................ 22 1 1 1.00 1 1 0 0 0
........................................................................................CCTATGTAAGTCATATTCA...................................................... 19 1 1 1.00 1 1 0 0 0
................................................TCAATGCATATGACTTCCATAG........................................................................................... 22 2 1 1.00 1 1 0 0 0
....................................................................................AAGTTCTATGTAAGTCATATGCA...................................................... 23 2 1 1.00 1 1 0 0 0
...................................................................................CAAGTCCTATGTAAGTCATATG........................................................ 22 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTCTGTAAGTCATATG........................................................ 20 1 1 1.00 1 0 0 1 0
..................................................................................TTGAGTCCTATGTAAGTCATATG........................................................ 23 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAATCATAGGCA...................................................... 22 2 1 1.00 1 1 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATAC....................................................... 23 2 1 1.00 1 1 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATTTGC....................................................... 23 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGCAAGTCATATGCA...................................................... 22 1 1 1.00 1 1 0 0 0
........................................................................................CCTATCTAAGTCATATGCT...................................................... 19 2 1 1.00 1 1 0 0 0
....................................................................................TAGTCCTAGGTAAGTCATATTC....................................................... 22 3 1 1.00 1 1 0 0 0
.................................................CAATGCATATGACTTCCAGA............................................................................................ 20 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAGGTCATAGGCA...................................................... 22 2 1 1.00 1 1 0 0 0
.......................................................................................TCCCATGTAAGTCATATGCA...................................................... 20 1 1 1.00 1 1 0 0 0
........................................................................................CCTATGTAAGTCATATGCATA.................................................... 21 0 1 1.00 1 1 0 0 0
.................................................CAAGGCATATGACTTCCATATGGC........................................................................................ 24 1 1 1.00 1 1 0 0 0
....................................................................................TAGTCCTATGTACGTCATATGCA...................................................... 23 2 1 1.00 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:1943696-1943856 - dmo_140 confident AATGG-TTATTG------AA--------GT-TTT--CACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----ATTC---G---CTCCTG-AAAA-------GTGTAA-------------------------------------------------------------------------------A-------------------A-TCTC-GA-A-
droVir3 scaffold_12855:414660-414857 + dvi-mir-iab-8 Known_mirbase TAATG-------------CAATCTAAATATATCA----CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACA----AT-------AAGTGCT-------------------------------CCGCT------ATAAACACCTCAGTTTTCATCGCACGCTCTTCAAAACCAAA---------------TAACCAAAT-------------------A--A
droGri2 scaffold_14906:12815059-12815242 - dgr_28 candidate-rescued ATTAT-TTATCG------AAATTTATATATATACAAAACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTA---------C---AAGAGTGTCC-T-----TTGGAGTGTCC------CC----CCGGT------GTAAACAC---AG---------------------------------------------------------------------TGT--A
droWil2 scf2_1100000004943:4905570-4905705 + dwi_203 confident T-------------------------------TT--CACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-------G---GAAAGTGACC-----------G------------------GT----------------------------------------------------------------------------------------ACC-CG-G-
dp5 2:17671721-17671864 - dps-mir-iab-8 Known_mirbase T-------------------------------TC--GACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C---ATAACCGCTG-AAAG-----------AA-------------------------------------------------------------------------------A-------------------A-TTAC-GA-G-
droPer2 scaffold_0:11526527-11526670 - dpe_160 candidate-rescued T-------------------------------TC--GACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C---ATAACCGCTG-AAAG-----------AA-------------------------------------------------------------------------------A-------------------A-TTAC-GA-A-
droAna3 scaffold_13340:7215155-7215334 + dan_56 confident AATAT-T--TCAGAATATTAA-------GT-TTT----CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CTCC---GTAATGTTC-------------------------TAGTGC----TGCAATTAAAGATAT---A----------------------------------------------------------------T-TTCC-GACA-
droBip1 scf7180000396708:1638807-1638982 - AA--------------------------GT-TTT----CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CATC---GTAATTTTCT-GGTAAGATA-------------GTAGTGC----TGCAATTAAAGATAT---A----------------------------------T---------A-------------------T-TTCC-GA-C-
droKik1 scf7180000302313:151109-151296 - T------TTT-T------CAA-------GTGTTT----CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCATC--ATCC---GCAAGTGCTT-ATAAAG-GA-C------ACGAAAAAGGAC----TGCAGTTGCAGATAT---A----------------------------------G----------------------------ATAC-T-GCG--A
droFic1 scf7180000452523:122290-122477 - A---------------------------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAATCCGGCGAAAGTGACTGAAAG--ACGTG------------------TCGCTGCAGTTCGTGATGC---AG---------------------------ATTG-AG------ATAAATC--------------------CA-GT-G-
droEle1 scf7180000486474:1729383-1729570 - CATATATTTTTAAAGT--AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---GAAAGTGACG-A--------------------------------TGCAGTTGCAGATGC---A----------------------------------GATGAAGCTGG------AT--------------CCA-GA-G-
droRho1 scf7180000759657:23960-24121 - AACAG-TTTTAACAGT--AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---GAAAGTGCCA-AACAGGATGCG---------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000299102:622691-622895 - T-----------------AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---AAAAGTGCCG-AGAAAGATGCG------------------CCGCTGCAGATCCAGATCC---AG---------------------------ATGA-AG------ATGAGGCCAA-TAGAG-TGTGAATTT-TATAT--A
droTak1 scf7180000411269:86549-86684 - --------------------------------------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---AAAAGTGCCA-AAGA--------------------------------------------------------------------------------------------------------------------AG-GA-T-
droEug1 scf7180000409804:92842-93036 - TGG---TTTTTAAAGT--AAA-------CTGTTT----CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATA--ATCC---GAAAGTGACC-AAAATGAAGT------------------------GCAGTTCCAGATGC---AG---------------------------CCAAGCG------ATGAA-----AT--------------CCA-GA-T-
dm3 chr3R:12681952-12682109 - dme-mir-iab-8 Known_mirbase AGGTG-TCTTAA------AAA-------GTGTTT----CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATTC---AAAAGTGCTG-AAAATTATGCG---------------------------------------------------------------------------------------------------------------------
droSim2 3r:8574076-8574285 + dsi-mir-iab-8 Known_mirbase TA------TT-A------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC---AAAAGTGCTG-AAAATTATGCC------------------GTGTCGCGGATCTAGATGC---AG---------------------------ATAA-AG------ATGAAACCAAATACAGATGTGAAGAT-T-TAT--A
droSec2 scaffold_12:1472210-1472415 + dse_312 confident A-----------------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC---AAAAGTGCTG-AAAATTATGCC------------------GTGTCGCGGATCTAGATGC---AG---------------------------ATAA-AG------ATGAAACCAAATACAGATGTGAAGAT-T-TAT--A
droYak3 3R:11708923-11709138 + dya_90 confident AGCAG-TATTAA------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--GTCC---AAAAGTGCTG-AAAATTACGCG------------------TCGTCGCGGATCGAGATGT---GG---------------------------ATAA-AG------ATGAAACCATATCCAGATGTGAAAAT-T-TGT--A
droEre2 scaffold_4770:8952392-8952587 + der_113 confident --------------------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--ATCC---AAAAGTGCTG-AAAATTATACG------------------TCGTCGCGGATCCAGATGC---AG---------------------------ATAA-AG------ATGAGACCAAATCCAGATGTGAAGAT-A-TAT--A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AATGG-TTATTG------AA--------GT-TTT--CACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----ATTC---G---CTCCTG-AAAA-------GTGTAA-------------------------------------------------------------------------------A-------------------A-TCTC-GA-A-SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221891.0089121511016559
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191603.006031600682427
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211595.005954654001179
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201147.001471073001522
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................241104.0010466601274
..........................................................................................................GGATACATTCAGTATACGTATA...........................................................................................................................................................................22192.00924000880
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................20154.00544900050
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23133.00332510133
.........................................................................................................AGGATACATTCAGTATACGTATA...........................................................................................................................................................................23123.00231000220
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................24116.00161000510
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................21116.00161500010
.........................................................................................................AGGATACATTCAGTATACGTA.............................................................................................................................................................................21111.0011020090
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................25110.0010200017
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1918.008800000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1818.008800000
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2517.007310012
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2315.005500000
..........TG------AA--------GT-TTT--CACACATCCCGC...........................................................................................................................................................................................................................................................2114.004010030
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2114.004100102
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2214.004010030
...........................................................................................................GATACATTCAGTATACGTATAC..........................................................................................................................................................................2214.004000040
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2213.003100020
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................2013.003100002
..........................................................................................................GGATACATTCAGTATACGTAT............................................................................................................................................................................2112.002200000
...........................................................................................................GATACATTCAGTATACGTATA...........................................................................................................................................................................2112.002100010
.........................................................................................................AGGATACATTCAGTATACGTAT............................................................................................................................................................................2212.002200000
..........................................................................................................GGATACATTCAGTATACGTAC............................................................................................................................................................................2112.002000020
....................................................................TTACGTATACTGAAGGTAC....................................................................................................................................................................................................................1911.001000001
......................................................................ACGTATACTGAAGGTATA...................................................................................................................................................................................................................1811.001100000
....................................................................TTACGTATACTGAAGGTATACG.................................................................................................................................................................................................................2211.001000010
........................................................................GTATACTGAAGGTATACC.................................................................................................................................................................................................................1811.001000010
....................................................................TTACGTATACTGAAGGTATAT..................................................................................................................................................................................................................2111.001100000
..........................................................................................................GGATACATTCAGTATACGTATT...........................................................................................................................................................................2211.001000010
....................................................................TTACGTATACTGAAGGTATACCGGTA.............................................................................................................................................................................................................2611.001100000
...........................................................................................GATAGGATACACTCAGGATACATTCAGT....................................................................................................................................................................................2811.001000001
......................................................................ACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2211.001100000
...................................................................GTTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2211.001100000
............................................................................................ATAGGATACACTCAGGAT.............................................................................................................................................................................................1811.001001000
....................................................................TTACGTATACTGAAGGTTC....................................................................................................................................................................................................................1911.001000001
..........................................................................................................GGATACATTCAGTATACGT..............................................................................................................................................................................1911.001100000
...........................................................................................................GATACATTCAGTATACGTATAA..........................................................................................................................................................................2211.001000010
......................................................................................................CTCAGGATACATTCAGTA...................................................................................................................................................................................1811.001000001
..........................................................................ATACTGAAGGTATACCGGT..............................................................................................................................................................................................................1911.001000001
...........................................CCCGCGTTGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2511.001000010
......................................................................................................CTCAGGATACATTCAGTATACGTATA...........................................................................................................................................................................2611.001000001
...........................................................................................................GATACATTCAGTATACGTAT............................................................................................................................................................................2011.001100000
.....................................................................................ATACCGGATAGGATACACTCAGGAT.............................................................................................................................................................................................2511.001000001
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2111.001000001
....................................................................TTACGTATACTGAAGGTATACCT................................................................................................................................................................................................................2311.001000010
...........................................................................................GATAGGATACACTCAGGATAC...........................................................................................................................................................................................2111.001100000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1811.001100000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.001100000
................................................................CGTGTTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2511.001100000
droVir3
TAATG-------------CAATCTAAATATATCA----CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACA----AT-------AAGTGCT-------------------------------CCGCT------ATAAACACCTCAGTTTTCATCGCACGCTCTTCAAAACCAAA---------------TAACCAAAT-------------------A--ASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................1911125.0011251111000121125139100001011106926422125211931900148000011200000000000000000000117800000001000100000
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221694.0069410205540605040000413010328010211206237117040000049000000000000000000010102000000000000000
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................241635.006350023201400000000000000008000001708658242050100024000000000000000000000002000000000000000
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211530.0053000201502010100003102103160002380722485020000032000000000000000000000201000000000000000
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201344.00344006710723801500001101005110000054501862020000011000000000000000000010400000000000000110
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................231306.0030610132090101000001101020150000069401583070000143000000000000000000000100000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................251149.00149000015000000000000001100000031171358070000015000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................211121.00121002009010400000000003000001013316270100010012000000000000000000000100000000000000000
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................20190.009000000110000000000000061000000152151707000006000000000000000000000100000000000000000
.........................................................................................................AGGATACATTCAGTATACGTA.............................................................................................................................................................................21181.00810001010000000000000000100000162582402000003000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25168.00680020030000000000001000010000181751301000006000000000000000000000100000000000000000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................24140.004000100800000000000000000000004315020000014000000000000000000000200000000000000000
.........................................................................................................AGGATACATTCAGTATACGTAT............................................................................................................................................................................22125.00250000000000000000000000000000782601000000000000000000000100000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTATA...........................................................................................................................................................................23123.00230010000000000000000000000000960601000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTATA...........................................................................................................................................................................22121.00210052000000000000000000000000241401000000000000000000000000010000100000000000000
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................22116.00160010000100000000000000100000631300000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................20116.001600150000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................21115.001500141000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACT...................................................................................................................................................................................................36114.00140000000000000000000000000000000000000000010000000003020002600000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTC..................................................................................................................................................................................................37113.00130000000000000000000000000000000000000000000000000000220010800000000000000000000
....................................................................TTACGTATACTGAAGGTATACCC................................................................................................................................................................................................................2318.0080000000000000000000000000000303200000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAAA.................................................................................................................................................................................................................2218.0080000000000000000000000000000221200001000000000000000000000000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTAA............................................................................................................................................................................2218.0080000000000000000000000000000022300000000000000000000000000000100000000000000000
......................................................................ACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2217.0070030000000000000000000000000111100000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1817.0070000000101000000000020000000010101000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2217.0070020000000000000000000000000100400000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAT..................................................................................................................................................................................................................2116.0060010000000000010000000000000210100000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTAT............................................................................................................................................................................2115.0050020000000000000000000000000021000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGTA.............................................................................................................................................................................................................2615.0050000000000000000000000002000020100000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGAA.............................................................................................................................................................................................................2615.0050000000000000000000000000000111200000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1914.0040000010000000000000000000000100100000000000000000000000000000100000000000000000
.........................................................................................................AGGATACATTCAGTATACG...............................................................................................................................................................................1914.0040000000000000000000000000000100200000000000000000000000000001000000000000000000
....................................................................TTACGTATACTGAAGGTAC....................................................................................................................................................................................................................1913.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2113.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................ACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2313.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATC...................................................................................................................................................................................................................2013.0030000000100000000000000000000010000000000000000000000000000000100000000000000000
..................................................CGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................1813.0030000000000000000000000000000020100000000000000000000000000000000000000000000000
..........................................................................ATACTGAAGGTATACCGG...............................................................................................................................................................................................................1813.0030000010000000000000000000000010000000001000000000000000000000000000000000000000
.......................................................................CGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2112.0020010000000000000000000000000000001000000000000000000000000000000000000000000000
.........................................ATCCCGCGTCGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2712.0020000010000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAAAA................................................................................................................................................................................................................2312.0020000000000000000000000000000110000000000000000000000000000000000000000000000000
........................................................................................................CAGGATACATTCAGTATACGTA.............................................................................................................................................................................2212.0020000000000000000000000000000101000000000000000000000000000000000000000000000000
.......................................................................................................TCAGGATACATTCAGTATACGTATA...........................................................................................................................................................................2512.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
................................................GTCGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2012.0020010000000000000000000000000000000000000000000000000000000010000000000000000000
....................................................................TTACGTATACTGAAGGTATACT.................................................................................................................................................................................................................2212.0020000000000000000010000000000000000000001000000000000000000000000000000000000000
...........................................CCCGCGTCGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2512.0020000000000000000000000000000000001000000000000000010000000000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTT.............................................................................................................................................................................2112.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
...................................................................GTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1912.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAAATATATCA----CACATCCCGC...........................................................................................................................................................................................................................................................2112.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
...........................................................................................................GATACATTCAGTATACGTAT............................................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GATACATTCAGTATACGTATAA..........................................................................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTG.............................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................CAGGATACATTCAGTATACGTAT............................................................................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGCA.............................................................................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................ACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCAA...............................................................................................................................................................................................................2411.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTCT.................................................................................................................................................................................................3811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTA.............................................................................................................................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................CGTCGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGG..............................................................................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGATAGGATACA.....................................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................TCAGGATACATTCAGTATACGT..............................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTT.....................................................................................................................................................................................................................1811.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................GTTACGTATACTGAAGGTATA...................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGAT.............................................................................................................................................................................................................2611.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGTC.............................................................................................................................................................................................................2611.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GTCGCTGGTGTTTCCTCGTA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2011.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCT................................................................................................................................................................................................................2311.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGAG.............................................................................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................ACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTATAA..........................................................................................................................................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................AT-------AAGTGCT-------------------------------CCGCT------ATAAACA.................................................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTC.............................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2411.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGTC..............................................................................................................................................................................................................2511.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTAA............................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGT..............................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GATACATTCAGTATACGTATAT..........................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATATA.................................................................................................................................................................................................................2211.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droGri2
ATTAT-TTATCG------AAATTTATATATATACAAAACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTA---------C---AAGAGTGTCC-T-----TTGGAGTGTCC------CC----CCGGT------GTAAACAC---AG---------------------------------------------------------------------TGT--ASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................19132.00321319
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................20118.0018171
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................21115.0015150
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2219.00990
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2414.00440
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2114.00440
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1813.00330
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1912.00220
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2412.00211
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2012.00220
droWil2
T-------------------------------TT--CACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-------G---GAAAGTGACC-----------G------------------GT----------------------------------------------------------------------------------------ACC-CG-G-SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191236.002361128672317
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211224.0022411771432
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201135.001350776448
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24187.00870580290
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................22166.00660411222
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23124.0024017070
.........................................................................................................AGGATACATTCAGTATACGTA.............................................................................................................................................................................21116.0016040102
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25114.001404190
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................22113.0013110110
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................18113.0013013000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................20111.0011011000
.................................................TTGTTGGTGTTTCATCGTG.......................................................................................................................................................................................................................................19110.0010000100
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................2019.00904320
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1919.00909000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2319.00909000
.........................................................................................................AGGATACATTCAGTATACGTAT............................................................................................................................................................................2216.00604020
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2514.00401030
.........................................................................................................AGGATACATTCAGTATACGTATA...........................................................................................................................................................................2313.00301020
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2112.00202000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2212.00202000
..........................................................................................................GGATACATTCAGTATACGTAT............................................................................................................................................................................2112.00202000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2412.00201010
...................................................................GTTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2212.00202000
...............................................CGTTGTTGGTGTTTCATCGTG.......................................................................................................................................................................................................................................2112.00200020
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2012.00202000
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2111.00100100
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1811.00100010
.....................................................................TACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2411.00101000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2111.00101000
.........................................ATCCCGCGTTGTTGGTGTTTCATCGTG.......................................................................................................................................................................................................................................2711.00100010
......................................................................ACGTATACTGAAGGTATAC..................................................................................................................................................................................................................1911.00101000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.00101000
....................................................................TTACGTATACTGAAGGTATACG.................................................................................................................................................................................................................2211.00101000
....................................................................TTACGTATACTGAAGGTATACCGGTA.............................................................................................................................................................................................................2611.00101000
............................................................................................................ATACATTCAGTATACGTATACG.........................................................................................................................................................................2211.00100010
......................................................................ACGTATACTGAAGGTATA...................................................................................................................................................................................................................1811.00101000
.....................................................................TACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2111.00101000
.........................................................................................................AGGATACATTCAGTATACGTC.............................................................................................................................................................................2111.00101000
.........................................................................................................AGGATACATTCAGTATACGTATAA..........................................................................................................................................................................2411.00101000
.....................................................................................................ACTCAGGATACATTCAGT....................................................................................................................................................................................1811.00100100
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2411.00101000
...........................................CCCGCGTTGTTGGTGTTTCATCGTG.......................................................................................................................................................................................................................................2511.00100100
dp5
T-------------------------------TC--GACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C---ATAACCGCTG-AAAG-----------AA-------------------------------------------------------------------------------A-------------------A-TTAC-GA-G-SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211736.007360611562815690110
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191390.0039012410153799060
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201370.00370029961037311040
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221326.003260105157351552070
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................241183.001830484031001243
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................20132.003203110000000
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................19130.003003000000000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................18128.002802800000000
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23120.002001210100060
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25115.00150700112040
.........................................................................................................AGGATACATTCAGTATACGTATA...........................................................................................................................................................................23111.00110080200010
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................21111.001101100000000
..........................................................................................................GGATACATTCAGTATACGTATA...........................................................................................................................................................................2216.0060060000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2516.0060200002020
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2215.0050200300000
.........................................................................................................AGGATACATTCAGTATACGTA.............................................................................................................................................................................2114.0040130000000
.........................................................................................................AGGATACATTCAGTATACGTAT............................................................................................................................................................................2214.0040310000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2014.0040000004000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2214.0040210000010
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2314.0040400000000
......................................................................ACGTATACTGAAGGTATAC..................................................................................................................................................................................................................1913.0030300000000
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................2013.0030000002010
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2412.0020000001010
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2112.0020200000000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1812.0020100100000
.............................................................................................................TACATTCAGTATACGTATACGT........................................................................................................................................................................2211.0010000001000
...........................................................................................................GATACATTCAGTATACGTATAC..........................................................................................................................................................................2211.0010010000000
......................................................................ACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2211.0010100000000
.............................................................................................................TACATTCAGTATACGTATA...........................................................................................................................................................................1911.0010100000000
....................................................................TTACGTATACTGAAGGTTA....................................................................................................................................................................................................................1911.0010000001000
....................................................................TTACGTATACTGAAGGTATTA..................................................................................................................................................................................................................2111.0010000100000
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2111.0010000001000
....................................................................TTACGTATACTGAAGGTATACT.................................................................................................................................................................................................................2211.0010000000010
....................................................................TTACGTATACTGAAGGTATTT..................................................................................................................................................................................................................2111.0010000000010
.........................................................................................................AGGATACATTCAGTATACGTATAC..........................................................................................................................................................................2411.0010100000000
......................................................................ACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2111.0010100000000
.......................................................................CGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2111.0010100000000
.....................................................................TACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2111.0010100000000
droPer2
T-------------------------------TC--GACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C---ATAACCGCTG-AAAG-----------AA-------------------------------------------------------------------------------A-------------------A-TTAC-GA-A-SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191543.00543025562505
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................20164.0064015191128
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................21146.00460393004
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................22124.00242192001
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24111.0011081002
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................20110.0010010009
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2312.002020000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2412.002000002
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2112.002020000
....................................................................TTACGTATACTGAAGGTTA....................................................................................................................................................................................................................1912.002000002
....................................................................TTACGTATACTGAAGGTATACT.................................................................................................................................................................................................................2211.001000001
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.001010000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2011.001010000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2111.001000001
.......................................................................CGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2111.001010000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2511.001000001
..........................................................................................................GGATACATTCAGTATACGTATA...........................................................................................................................................................................2211.001010000
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................2011.001000001
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1911.001010000
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2411.001010000
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1911.001000001
.........................................ATCCCGCGTTGCTGGTGTTTCCTCGTG.......................................................................................................................................................................................................................................2711.001100000
....................................................................TTACGTATACTGAAGGTATAT..................................................................................................................................................................................................................2111.001001000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1811.001010000
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2311.001010000
droAna3
AATAT-T--TCAGAATATTAA-------GT-TTT----CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CTCC---GTAATGTTC-------------------------TAGTGC----TGCAATTAAAGATAT---A----------------------------------------------------------------T-TTCC-GACA-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191232.0023244001015325
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................22189.008929442536
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24147.00473330308
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................20145.00452540088
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................21129.00292070020
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................24119.00193000124
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................21118.00183001113
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................25111.0011300134
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23110.0010600031
.............................................................................................................TACATTCAGTATACGTATACGT........................................................................................................................................................................2216.006000060
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1814.004400000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2114.004310000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2014.004110020
..........................................................................................................GGATACATTCAGTATACGTATA...........................................................................................................................................................................2214.004130000
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................2013.003000030
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2512.002200000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2212.002200000
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1912.002200000
....................................................................TTACGTATACTGAAGGTATACCA................................................................................................................................................................................................................2311.001100000
.........................................................................................................AGGATACATTCAGTATACGTAT............................................................................................................................................................................2211.001100000
..........................................................................................................GGATACATTCAGTATACGTAT............................................................................................................................................................................2111.001010000
....................................................................TTACGTATACTGAAGGTATACCGTTG.............................................................................................................................................................................................................2611.001000010
......................................................................ACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2011.001100000
....................................................................TTACGTATACTGAAGGTATACCGGTGT............................................................................................................................................................................................................2711.001000010
.....................................................................TACGTATACTGAAGGTATACCGTT..............................................................................................................................................................................................................2411.001100000
..................................................................TGTTACGTATACTGAAGGTAG....................................................................................................................................................................................................................2111.001000010
..................................................................TGTTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2211.001100000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2111.001100000
...................................................................................................ACACTCAGGATACATTCAG.....................................................................................................................................................................................1911.001010000
....................................................................TTACGTATACTGAAGGTATACCGC...............................................................................................................................................................................................................2411.001000010
.......................................................................CGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2111.001100000
..................................................................TGTTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2411.001010000
....................................................................TTACGTATACTGAAGGTAC....................................................................................................................................................................................................................1911.001000010
....................................................................TTACGTATACTGAAGGTACT...................................................................................................................................................................................................................2011.001100000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2011.001100000
..................................................................TGTTACGTATACTGAAGGTATG...................................................................................................................................................................................................................2211.001100000
..................................................................TGTTACGTATACTGAAGGT......................................................................................................................................................................................................................1960.171100000
droBip1
AA--------------------------GT-TTT----CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CATC---GTAATTTTCT-GGTAAGATA-------------GTAGTGC----TGCAATTAAAGATAT---A----------------------------------T---------A-------------------T-TTCC-GA-C-SizeHit CountTotal NormTotal
No Reads
droKik1
T------TTT-T------CAA-------GTGTTT----CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCATC--ATCC---GCAAGTGCTT-ATAAAG-GA-C------ACGAAAAAGGAC----TGCAGTTGCAGATAT---A----------------------------------G----------------------------ATAC-T-GCG--ASizeHit CountTotal NormTotal
No Reads
droFic1
A---------------------------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAATCCGGCGAAAGTGACTGAAAG--ACGTG------------------TCGCTGCAGTTCGTGATGC---AG---------------------------ATTG-AG------ATAAATC--------------------CA-GT-G-SizeHit CountTotal NormTotal
No Reads
droEle1
CATATATTTTTAAAGT--AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---GAAAGTGACG-A--------------------------------TGCAGTTGCAGATGC---A----------------------------------GATGAAGCTGG------AT--------------CCA-GA-G-SizeHit CountTotal NormTotal
No Reads
droRho1
AACAG-TTTTAACAGT--AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---GAAAGTGCCA-AACAGGATGCG---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T-----------------AAA-------GTGTTT----CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---AAAAGTGCCG-AGAAAGATGCG------------------CCGCTGCAGATCCAGATCC---AG---------------------------ATGA-AG------ATGAGGCCAA-TAGAG-TGTGAATTT-TATAT--ASizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC---AAAAGTGCCA-AAGA--------------------------------------------------------------------------------------------------------------------AG-GA-T-SizeHit CountTotal NormTotal
No Reads
droEug1
TGG---TTTTTAAAGT--AAA-------CTGTTT----CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATA--ATCC---GAAAGTGACC-AAAATGAAGT------------------------GCAGTTCCAGATGC---AG---------------------------CCAAGCG------ATGAA-----AT--------------CCA-GA-T-SizeHit CountTotal NormTotal
No Reads
dm3
AGGTG-TCTTAA------AAA-------GTGTTT----CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATTC---AAAAGTGCTG-AAAATTATGCG---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................1916832.006832000000000000000000000138000000000001201210401403114301000000000000000000000000000000000000000000011000101000000000001001000000000010000000000001002072288010400000000000020000330001010000002125146890009001395000000300000000010207910213101714140000000083020000112260005300000000000200000000086334859682037011016003233332100510265205030402900206245003295501197303022090051718382124233217221000010
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221923.00923000000000100000000000004000000000000000000103000003000000000000000000000000000000001000000000101200006000000101000401000000000010000100000010000000011400000000000000012010024549030250000071007000013090000000000000000055462049146001600000000027250300001543200240000000000000000000000515140400102200001172000140110520010000033000011002081322000000
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201564.0056400000000000000000000000000000000000000000000301000000000100000000000000000000000000000000100000030002010000000000000000000000000000000000000000000001800000000000000000010005020000000000040300001105000000000000000002225004302128000042001102000098500035000001000000000000000020002020161000000040005010040450001000053000030001603751377000000
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211486.004860000000000100000000000020000000000001110002030000020000000000000000000000000000000000000000000013001400000002000000000000000010010000000000001000000030000000000000002501002241301091000004142100002050000000000000000043130083610011000091007504000092320020000000000000000000000011404030082000100022001011110050000100010000013003022010000000
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................231194.0019400000000100010000000000200000000000000000000000000000000010000000000000000000000000030000060210215200621001023222107000000000000000000000000000000000020000000000000000102000100000000000002103000017028000000000000000000001000100000000000022000000132001000000000000000000000000001100190000000110000000001100000000900004000020100000000
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................241167.001670000000000000000000000000000000000000000000010000000000001100000000000000000000000050000001000001000000000000000000000000000000010100000000000000000000000000000000000100001310010220000033212000016012000000000000000003411004200006000000001300000080002000000000000000000000000100000070000001300000100000000000000600006000000000000000
..........................................................................................................GGATACATTCAGTATACGTTTA...........................................................................................................................................................................221165.001650000000020000000000000000000000000000000000000000000000045000000000000000000000003402135100206003008102701000000007201100000000000000000000000000000000000000000000000000000000031100000000000000000020000000000000000000000000000000000000000000000020000000000000000000000000000000000020000001100000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................241155.001550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000001401000080800000000000001000111000000000000000000100000002000000000000000000000000000000000031100000052000110020110000000041000023000040110000000
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................21199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001100000000000000000000000000000000000401000020200000000000000000002000010000000000001000000040002000000000000000000000000100000015000000092000000030320000000017000020001020020000000
....................................................................TTACGTATACTGAAGGTATACCGGATC............................................................................................................................................................................................................27160.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................25156.00560000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000010000000000000000000000000000000000000000000001000000010000000000000000001000000000000000001900000030600000000000000000110000030000000000001200000071000000000000000000000000000000000030000000010000000000000000000100001000000000000000
.................................................TTGTTAGTGCTCTCTCGTG.......................................................................................................................................................................................................................................19150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000001700000094000000000000000000011800002000010000000000
.........................................................................................................AGGATACATTCAGTATACGTTT............................................................................................................................................................................22149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000310000100000001100600000000000000000000000000000000001000000000000000010000000000000000000500000040000000000000000000001000000000000000000200000060001000000000000000000000000011000050000000010000000100000000000300001000000001000000
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25142.0042000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000701000020200000000000000000112000130000000000002200000051000000000000000000000000000000000030000001000000000001000000000300001000000000000000
.........................................................................................................AGGATACATTCAGTATACGTTTA...........................................................................................................................................................................23138.0038000000001000000000000000000000000000000000000000000000000000000000000000000000000305400000000000100050000000000000000000000000000000000000000100000000000000000000000000100001000000000000100000000100000000000000000011000000000000000000000000050000000000000000000000000000000000030000001000001000000000000000100001000000000000000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................21124.0024000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000303000020000000000000000000001000010000000000000000000001001000000000000000000000010000000040000000000000000100000000000100001001000000000000
...........................................................................................................GATACATTCAGTATACGTTTAA..........................................................................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000120000000100000000000000000000200000000000000000000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................18118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000010000000000000000000000000000000000080000000201000000000000000000000000001020000000000
....................................................................TTACGTATACTGAAGGTATACCATC..............................................................................................................................................................................................................25117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GTTGTTAGTGCTCTCTCGTG.......................................................................................................................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000300000000000000000000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................18113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010001000000000000000000000000100000040000000000010000000100000000100000001010000000000
....................................................................TTACGTATACTGAAGGTAG....................................................................................................................................................................................................................19112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000020001000000020000100400000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACATC...............................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAATC................................................................................................................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GGATACATTCAGTATACGTTT............................................................................................................................................................................21111.0011000000100000000000000000000000000000000000000000000000000000000000000000000000000200400000000000000000000000000100000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000100001100000000200000000000000000000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................22110.0010000000000000000000000000000000000000000000101000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000001000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000010000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTAC....................................................................................................................................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000010000000000010000101100001000000000000000000000000
.........................................................................................................AGGATACATTCAGTATACGTT.............................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000001000000000000000000000000200000000000000000000
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1917.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000010000101000000000100000001000000000000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000100000000000000100000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................TACATTCAGTATACGTTTACGT........................................................................................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000001000000000000000000200000000000000000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000010000000000000000000000000000000001001000000000000
..........................................................................................................GGATACATTCAGTATACGTTTAA..........................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GATACATTCAGTATACGTTTA...........................................................................................................................................................................2116.006000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTTACGTATACTGAAGGTATA...................................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................TTACGTATACTGAAGGT......................................................................................................................................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CGTTGTTAGTGCTCTCTCGTG.......................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000100001000000000000000
...........................................................................................................GATACATTCAGTATACGTTTAT..........................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000
.............................................................................................TAGGATACACTCAGGATACATTCAGT....................................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
..........................................................................................................GGATACATTCAGTATACG...............................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATAT..................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTTACGTATACTGAAGGTA.....................................................................................................................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................TTACGTATACTGAAGGTT.....................................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001000000
.............................................................................................................TACATTCAGTATACGTTTA...........................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGAA.............................................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................................................................ATACTGAAGGTATACCGG...............................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GATACATTCAGTATACGTTTCA..........................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ATAGGATACACTCAGGATACAT.........................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATC...................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................ACGTTGTTAGTGCTCTCTCGTG.......................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................GATAGGATACACTCAGGATACATTCAGT....................................................................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................TACATTCAGTATACGTTTACGA........................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CATTCAGTATACGTTTAA..........................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGGATAA...........................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATACCGGAATC...........................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATATT.................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................GTTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATACATTCAGTATACGTTT............................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................AGTGCTCTCTCGTGTTACGTA................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................TTACGTATACTGAAGGTATACCGATC.............................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATAGGATACACTCAGGATACATTC.......................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TA------TT-A------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC---AAAAGTGCTG-AAAATTATGCC------------------GTGTCGCGGATCTAGATGC---AG---------------------------ATAA-AG------ATGAAACCAAATACAGATGTGAAGAT-T-TAT--ASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................GGATACATTCAGTATACGTTTACG.........................................................................................................................................................................241196.001960000194200000000000
.........................................................................................................AGGATACATTCAGTATACGTTTACG.........................................................................................................................................................................251142.001420000142000000000000
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................241123.001230001026110223933018000
.........................................................................................................AGGATACATTCAGTATACGTTT............................................................................................................................................................................221109.001090001107100000000000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................181106.00106000099601000000000
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191105.001051241361035112300000
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201104.00104022884200000501000
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................22174.00740752440004202701000
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................21148.0048040305010011600000
.........................................................................................................AGGATACATTCAGTATAC................................................................................................................................................................................18138.0038000038000000000000
.........................................................................................................AGGATACATTCAGTATACG...............................................................................................................................................................................19134.0034000033100000000000
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23134.00340021140000010016000
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25127.002702516000251401000
.........................................................................................................AGGATACATTCAGTATACGT..............................................................................................................................................................................20120.0020000020000000000000
..........................................................................................................GGATACATTCAGTATACGTTT............................................................................................................................................................................21119.0019000018100000000000
..........................................................................................................GGATACATTCAGTATACG...............................................................................................................................................................................18115.0015000015000000000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................25114.001401000020221006000
..........................................................................................................GGATACATTCAGTATACGT..............................................................................................................................................................................19111.0011000011000000000000
..........................................................................................................GGATACATTCAGTATACGTT.............................................................................................................................................................................20111.0011000011000000000000
.........................................................................................................AGGATACATTCAGTATACGTT.............................................................................................................................................................................2119.00900009000000000000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2318.00800014000011001000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1818.00800016100000000000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2217.00700024000000001000
..........................................................................................................GGATACATTCAGTATACGTTTA...........................................................................................................................................................................2217.00700005000000200000
.................................................TTGCTCGTGCTATCTCGTG.......................................................................................................................................................................................................................................1916.00600300000001200000
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2415.00501002001010000000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2414.00400010000002001000
..........................................................................................................GGATACATTCAGTATACGTTTAC..........................................................................................................................................................................2314.00400004000000000000
...........................................................................................................GATACATTCAGTATACGTTTAA..........................................................................................................................................................................2213.00300010000020000000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2113.00300030000000000000
............................................................................................ATAGGATACACTCAGGATACAT.........................................................................................................................................................................................2212.00200000000000002000
....................................................................TTACGTATACTGAAGGTATACCGGG..............................................................................................................................................................................................................2512.00200200000000000000
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1912.00200002000000000000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2012.00200002000000000000
................................................GTTGCTCGTGCTATCTCGTG.......................................................................................................................................................................................................................................2012.00200200000000000000
....................................................................TTACGTATACTGAAGGTATACCGGAT.............................................................................................................................................................................................................2612.00201001000000000000
...........................................................................................................GATACATTCAGTATACGT..............................................................................................................................................................................1811.00100001000000000000
....................................................................TTACGTATACTGAAGGTAC....................................................................................................................................................................................................................1911.00101000000000000000
....................................................................TTACGTATACTGAAGGT......................................................................................................................................................................................................................1711.00100000010000000000
....................................................................TTACGTATACTGAAGGTATACCGTT..............................................................................................................................................................................................................2511.00100000000000001000
....................................................................TTACGTATACTGAAGGTATACT.................................................................................................................................................................................................................2211.00100000000000100000
.....................................................................TACGTATACTGAAGGTATACCGGAT.............................................................................................................................................................................................................2511.00100001000000000000
....................................................................TTACGTATACTGAAGGTATACCA................................................................................................................................................................................................................2311.00100100000000000000
...............................................CGTTGCTCGTGCTATCTCGTG.......................................................................................................................................................................................................................................2111.00100000000100000000
....................................................................TTACGTATACTGAAGGTATACCGGC..............................................................................................................................................................................................................2511.00100000000010000000
..........................................................................ATACTGAAGGTATACCGG...............................................................................................................................................................................................................1811.00100000000001000000
.........................................................................................................AGGATACATTCAGTATACGTTTAC..........................................................................................................................................................................2411.00100001000000000000
.............................................................................................TAGGATACACTCAGGATACATTCAGT....................................................................................................................................................................................2611.00100000000000100000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2111.00100000000001000000
.........................................................................................................AGGATACATTCAGTATACGTTTA...........................................................................................................................................................................2311.00100000000000100000
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1911.00100000000000001000
...........................................................................................................GATACATTCAGTATACGTTTA...........................................................................................................................................................................2111.00100001000000000000
...........................................................................................GATAGGATACACTCAGGATACATTCA......................................................................................................................................................................................2611.00101000000000000000
......................................................................ACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2111.00100000000000001000
............................................................................................................ATACATTCAGTATACGTTTAT..........................................................................................................................................................................2111.00100000000100000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2011.00101000000000000000
...................................................................GTTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2611.00100100000000000000
...............................................................................................................CATTCAGTATACGTTTACG.........................................................................................................................................................................1911.00100001000000000000
droSec2
A-----------------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC---AAAAGTGCTG-AAAATTATGCC------------------GTGTCGCGGATCTAGATGC---AG---------------------------ATAA-AG------ATGAAACCAAATACAGATGTGAAGAT-T-TAT--ASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191185.0018551941327
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221130.001307916341
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................20170.00703421105
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24156.0056381170
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................21147.0047311033
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23127.0027122130
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................25117.00176290
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................18115.001500132
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................24110.00101720
.........................................................................................................AGGATACATTCAGTATACGTTTA...........................................................................................................................................................................2319.0093330
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2519.0092232
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2018.0088000
.........................................................................................................AGGATACATTCAGTATACGTTT............................................................................................................................................................................2217.0073121
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1815.0055000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2115.0051400
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2114.0040220
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2114.0044000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2314.0044000
..........................................................................................................GGATACATTCAGTATACGTTTA...........................................................................................................................................................................2213.0031110
.................................................TTGCTCGTGCTATCTCGTG.......................................................................................................................................................................................................................................1913.0030030
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2413.0032010
..........................................................................ATACTGAAGGTATACCGG...............................................................................................................................................................................................................1812.0020020
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1912.0022000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2212.0021001
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2012.0020200
....................................................................TTACGTATACTGAAGGTATACCCC...............................................................................................................................................................................................................2411.0011000
..........................................................................................................GGATACATTCAGTATACGTTT............................................................................................................................................................................2111.0011000
...............................................................................................................CATTCAGTATACGTTTAA..........................................................................................................................................................................1811.0010010
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.0011000
................................................GTTGCTCGTGCTATCTCGTG.......................................................................................................................................................................................................................................2011.0010010
....................................................................TTACGTATACTGAAGGTATACT.................................................................................................................................................................................................................2211.0010010
....................................................................TTACGTATACTGAAGGTATACCGTT..............................................................................................................................................................................................................2511.0010100
.......................................................................CGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2211.0010010
....................................................................TTACGTATACTGAAGGTATACCGGATA............................................................................................................................................................................................................2711.0010010
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1911.0010100
.....................................................................TACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2411.0010100
droYak3
AGCAG-TATTAA------AAA-------GTGTTT----CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--GTCC---AAAAGTGCTG-AAAATTACGCG------------------TCGTCGCGGATCGAGATGT---GG---------------------------ATAA-AG------ATGAAACCATATCCAGATGTGAAAAT-T-TGT--ASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221529.00529010641731020000
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211270.00270014112160020000
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191131.001310680145530000
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................20191.009105021140060000
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24186.00860423950000000
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23123.0023016411010000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................21116.0016015100000000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2018.00808000000000
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2417.00701100050000
.........................................................................................................AGGATACATTCAGTATACGTTTA...........................................................................................................................................................................2316.00600420000000
.........................................................................................................AGGATACATTCAGTATACGTTT............................................................................................................................................................................2215.00502300000000
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2315.00505000000000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1814.00404000000000
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2514.00400220000000
..................................................................TGTTACGTATACTGAAGGTATA...................................................................................................................................................................................................................2213.00300300000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2513.00300200010000
..........................................................................................................GGATACATTCAGTATACGTTTA...........................................................................................................................................................................2213.00300300000000
....................................................................TTACGTATACTGAAGGTATAA..................................................................................................................................................................................................................2112.00202000000000
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1812.00201100000000
....................................................................TTACGTATACTGAAGGTATACCGGC..............................................................................................................................................................................................................2512.00200110000000
..........................................................................................................GGATACATTCAGTATACGTTT............................................................................................................................................................................2112.00200200000000
.........................................................................................................AGGATACATTCAGTATACGTT.............................................................................................................................................................................2112.00200200000000
..........................................................................................................GGATACATTCAGTATACGTTC............................................................................................................................................................................2112.00200200000000
.................................................TTGCTCGTGCTTTCTCGTG.......................................................................................................................................................................................................................................1911.00100100000000
......................................................................ACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2011.00101000000000
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2211.00101000000000
......................................................................ACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2211.00101000000000
....................................................................TTACGTATACTGAAGGTATACCGGG..............................................................................................................................................................................................................2511.00101000000000
........................................................................GTATACTGAAGGTATACCG................................................................................................................................................................................................................1911.00101000000000
......................................................................ACGTATACTGAAGGTATAC..................................................................................................................................................................................................................1911.00101000000000
............................................................................................................ATACATTCAGTATACGTTTACC.........................................................................................................................................................................2211.00100100000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2011.00100000010000
......................................................................ACGTATACTGAAGGTATACCGGC..............................................................................................................................................................................................................2311.00100100000000
.........................................................................................................AGGATACATTCAGTATACGTTC............................................................................................................................................................................2211.00100100000000
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2411.00101000000000
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1911.00101000000000
...................................................................GTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2011.00100000010000
...................................................................GTTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................2211.00100100000000
...............................................CGTTGCTCGTGCTTTCTCGTG.......................................................................................................................................................................................................................................2111.00100000010000
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1911.00101000000000
....................................................................TTACGTATACTGAAGGTATACCGA...............................................................................................................................................................................................................2411.00101000000000
....................................................................TTACGTATACTGAAGGTATACA.................................................................................................................................................................................................................2211.00100100000000
.......................................................................CGTATACTGAAGGTATACC.................................................................................................................................................................................................................1911.00101000000000
...........................................................................................................GATACATTCAGTATACGTTTAAC.........................................................................................................................................................................2311.00100100000000
...........................................................................................................GATACATTCAGTATACGTTTAT..........................................................................................................................................................................2211.00101000000000
droEre2
--------------------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--ATCC---AAAAGTGCTG-AAAATTATACG------------------TCGTCGCGGATCCAGATGC---AG---------------------------ATAA-AG------ATGAGACCAAATCCAGATGTGAAGAT-A-TAT--ASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................TTACGTATACTGAAGGTAT....................................................................................................................................................................................................................191533.0053369044375810
....................................................................TTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................221264.0026415577198140
....................................................................TTACGTATACTGAAGGTATAC..................................................................................................................................................................................................................211143.00143962623880
....................................................................TTACGTATACTGAAGGTATA...................................................................................................................................................................................................................201105.0010555701712140
....................................................................TTACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................24199.009983501604
....................................................................TTACGTATACTGAAGGTATACCG................................................................................................................................................................................................................23134.003428210300
....................................................................TTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................24117.001761001000
.....................................................................TACGTATACTGAAGGTATACC.................................................................................................................................................................................................................21113.001312100000
.....................................................................TACGTATACTGAAGGTATAC..................................................................................................................................................................................................................20113.001312000100
....................................................................TTACGTATACTGAAGGTA.....................................................................................................................................................................................................................1819.0091000080
.....................................................................TACGTATACTGAAGGTATACCGG...............................................................................................................................................................................................................2318.0088000000
....................................................................TTACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2517.0073000400
....................................................................TTACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2517.0073101200
.................................................TTGCTCGTGCTTTCTCGTG.......................................................................................................................................................................................................................................1916.0060100320
.....................................................................TACGTATACTGAAGGTATACCG................................................................................................................................................................................................................2215.0055000000
.........................................................................................................AGGATACATTCAGTATACGTTT............................................................................................................................................................................2215.0051011200
.....................................................................TACGTATACTGAAGGTATA...................................................................................................................................................................................................................1913.0033000000
..............................................ACGTTGCTCGTGCTTTCTCGTG.......................................................................................................................................................................................................................................2212.0020000020
..................................................................TGTTACGTATACTGAAGGTAT....................................................................................................................................................................................................................2112.0020000200
.........................................................................................................AGGATACATTCAGTATACGTTTA...........................................................................................................................................................................2312.0021001000
....................................................................TTACGTATACTGAAGGTATACCCT...............................................................................................................................................................................................................2412.0021001000
..........................................................................................................GGATACATTCAGTATACGTTTA...........................................................................................................................................................................2212.0021100000
....................................................................TTACGTATACTGAAGGTATACCGA...............................................................................................................................................................................................................2412.0022000000
.....................................................................TACGTATACTGAAGGTAT....................................................................................................................................................................................................................1812.0022000000
...................................................................GTTACGTATACTGAAGGTATACC.................................................................................................................................................................................................................2311.0011000000
.............................................................................................TAGGATACACTCAGGATACATTCA......................................................................................................................................................................................2411.0010000010
.....................................................................TACGTATACTGAAGGTATACCGGA..............................................................................................................................................................................................................2411.0011000000
...................................................................GTTACGTATACTGAAGGTATACCGT...............................................................................................................................................................................................................2511.0011000000
.......................................................................CGTATACTGAAGGTATAC..................................................................................................................................................................................................................1811.0011000000
..........................................................................................................GGATACATTCAGTATACGTT.............................................................................................................................................................................2011.0011000000
.........................................................................................................AGGATACATTCAGTATACGTTTAA..........................................................................................................................................................................2411.0011000000
.....................................................................TACGTATACTGAAGGTATACCGGT..............................................................................................................................................................................................................2411.0011000000
....................................................................TTACGTATACTGAAGGTATC...................................................................................................................................................................................................................2011.0010000100
...................................................................GTTACGTATACTGAAGGTATA...................................................................................................................................................................................................................2111.0011000000
.................................................TTGCTCGTGCTTTCTCGTGT......................................................................................................................................................................................................................................2011.0011000000
................................................GTTGCTCGTGCTTTCTCGTG.......................................................................................................................................................................................................................................2011.0010000100
....................................................................TTACGTATACTGAAGGTAA....................................................................................................................................................................................................................1911.0010000100
..........................................................................................................GGATACATTCAGTATACGTTT............................................................................................................................................................................2111.0011000000
....................................................................TTACGTATACTGAAGGTATACCGGAA.............................................................................................................................................................................................................2611.0011000000
....................................................................TTACGTATACTGAAGGTATT...................................................................................................................................................................................................................2011.0010000100
....................................................................TTACGTATACTGAAGGTATACCGC...............................................................................................................................................................................................................2411.0010100000

Generated: 10/20/2015 at 10:17 PM