ID:

dmo_1390

 Coordinate:

scaffold_6498:2363438-2363561 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.5 -13.3

Flybase annnotation

CDS [Dmoj\GI14020-cds]; CDS [Dmoj\GI14020-cds]; exon [dmoj_GLEANR_14046:4]; exon [dmoj_GLEANR_14046:5]; intron [Dmoj\GI14020-in]

Repeatable elements

NameClassFamilyStrand
Gypsy4-I_Dmoj-intLTRGypsy-
mature
  1. dmo_1388  scaffold_6498:2352736-2352758 -
  2. dmo_1390  scaffold_6498:2363528-2363550 -
  3. dmo_1392  scaffold_6498:2366982-2367004 -
  4. dmo_1393  scaffold_6498:2371375-2371397 -
star
  1. dmo_1388  scaffold_6498:2352649-2352675 -
  2. dmo_1390  scaffold_6498:2363441-2363467 -

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------##################################################
TCCCAGAAGCTGAGGACGGGGAAAACGGCGGACGAGGCGCGGTCAGCGCGGTGATGAAGAGGTGTCTTGAAGACCCGTCAGTCTCGGGAATCACTAAACTTCCCCACAGTAACCCCTTACTAACGTTAAACGATAAACAAAACTATATATTCAAACACTCTAAATTCGTCGAAGATATCAGTAGCGACGACACCGAGCCGTTTCCCGGTGAAGGGGCCAGAGGG
*************************************************************((((.((((((((......)))..(((((.........)))))...(((((....)))))..(((...))).................))))))))).............***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGA............................ 23 0 2 12.50 25 22 2 1 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGC.......................... 25 0 2 6.00 12 8 4 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAG........................... 24 0 2 3.50 7 5 0 2 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCG........................ 27 0 2 3.50 7 6 0 1 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCT............................................................................................................................................ 23 0 4 2.75 11 7 2 1 1 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGT....................... 28 0 2 2.00 4 4 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGTT...................... 29 0 2 2.00 4 3 1 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTC............................................................................................................................................. 22 0 4 2.00 8 3 5 0 0 0
......AAGCTGAGGACGGGGAAAACGGC................................................................................................................................................................................................... 23 0 4 1.75 7 7 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCC......................... 26 0 2 1.50 3 3 0 0 0 0
................................................................................................................................................ATATATTCAAACACTCTAAATTCGTCG..................................................... 27 0 2 1.50 3 3 0 0 0 0
......AAGCTGAGGACGGGGAAAACGG.................................................................................................................................................................................................... 22 0 4 1.25 5 4 1 0 0 0
...........................................................................................CACTAAACTTCCACACAGTAGCCCC............................................................................................................ 25 2 4 1.25 5 4 1 0 0 0
..............................................................................................................................................................................ATATCAGTAGCGACGACACCGAG........................... 23 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................ATATATTCAAACACTCTAAATTCG........................................................ 24 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACC.............................. 21 0 2 1.00 2 0 2 0 0 0
..............................................................................................................................................................................ATATCAGTAGCGACGACACCGA............................ 22 0 2 1.00 2 2 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTC........................................................................................................................................... 24 0 4 0.75 3 3 0 0 0 0
.................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCG........................ 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................ATATCAGTAGCGACGACACCGAGC.......................... 24 0 2 0.50 1 1 0 0 0 0
...........................................................................................CACTAAACTTCCCCACAGTAACCCC............................................................................................................ 25 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCG............................. 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGC....................... 28 1 2 0.50 1 1 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTCGGGAA...................................................................................................................................... 29 0 4 0.50 2 0 0 2 0 0
.............................................................................................................................................................................GATATCAGTAGGGACGACACCGAGCCG........................ 27 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................ATCAGTAGCGACGACACCGAGC.......................... 22 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................................TATATATTCAAACACTCTAAATTCGTCGT.................................................... 29 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGGGACGACACCGAG........................... 24 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................GCGACGACACCGAGCCGTTTCCC.................. 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCA........................ 27 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................GATTTCAGTAGCGACGACACCGAGC.......................... 25 1 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................GGTATCAGTAGCGACGACACCGAGCC......................... 26 1 2 0.50 1 0 1 0 0 0
...............................................GCGGTGATGAAGGGGTGG............................................................................................................................................................... 18 2 2 0.50 1 0 0 1 0 0
.................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCGTC...................... 25 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCGT....................... 24 0 2 0.50 1 1 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTCGGGA....................................................................................................................................... 28 0 4 0.50 2 2 0 0 0 0
...........................................................................................CACTAAACTTCCCCACAGTAACCC............................................................................................................. 24 0 4 0.50 2 2 0 0 0 0
...............................................................................................................................................................................TATCAGTAGCGACGACACCGAGCCG........................ 25 0 2 0.50 1 1 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGT.............................................................................................................................................. 21 0 4 0.50 2 2 0 0 0 0
..........................................................................................................................................................................GTAGATATCAGTAGCGACGACACC.............................. 24 1 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................GATATCAGTAGCAACGACACCGAGCCGT....................... 28 1 2 0.50 1 0 0 1 0 0
...............................................................................................................................................TATATATTCAAACACTCTAAATTCG........................................................ 25 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................ATCAGTAGCGACGACACCGA............................ 20 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................ATATCAGTAGCGACGACACCG............................. 21 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................TATCAGTAGCGACGACACCGAGC.......................... 23 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................TCGAAGATATCAGTAGCGACGACACC.............................. 26 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................ATATCAGTAGCGACGACACCGAGCC......................... 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................CAAAACTATATATTCAAACACTCT............................................................... 24 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................AAACTATATATTCAAACACTCTAA............................................................. 24 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................GAGCCGTTTCCCGGTGAAGGG......... 21 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................................AAACTATATATTCAAACACTCTAAATT.......................................................... 27 0 3 0.33 1 1 0 0 0 0
.....................AAAACGGCGGACGAGGCGC........................................................................................................................................................................................ 19 0 3 0.33 1 0 1 0 0 0
...........................................................................................................................................AAACTATATATTCAAACACTCTAAAT........................................................... 26 0 3 0.33 1 1 0 0 0 0
............................................................................................ACTAAACTTCCACACAGTAGCCC............................................................................................................. 23 2 4 0.25 1 0 1 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTCG.......................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGAC............................................................................................................................................. 22 1 4 0.25 1 0 0 0 1 0
.............................................................GTGTCTTGAAGACCCGTCAGTCCCG.......................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
......AAGCTGAGGACGGGGAAAAC...................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
......AAGCTGAGGACGGGGAAAACGGCG.................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
.............................................................................................................................TTAAACGATAAACAAAACTATATAT.......................................................................... 25 0 4 0.25 1 1 0 0 0 0
.................................................................................TCTCGGGAATCACTAAACTTCCAC....................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
...........................................................................................CACTAAACTTCCACACAGTAGCCC............................................................................................................. 24 2 4 0.25 1 1 0 0 0 0
........................................................................................................................TAACGTTAAACGATAAACAAAACT................................................................................ 24 0 4 0.25 1 1 0 0 0 0
....AGAAGCTGAGGACGGGGAA......................................................................................................................................................................................................... 19 0 4 0.25 1 0 1 0 0 0
......AGGCTGAGGACGGGGAAAACGGC................................................................................................................................................................................................... 23 1 4 0.25 1 0 1 0 0 0
.............................................................GGGTCTTGAAGACCCGTCAGTCTT........................................................................................................................................... 24 2 4 0.25 1 0 1 0 0 0
.............................................................GGGTCTTGAAGACCCGTCAGTCC............................................................................................................................................ 23 2 4 0.25 1 0 1 0 0 0
......AGGCTGAGGACGGGGAAAACGG.................................................................................................................................................................................................... 22 1 4 0.25 1 0 1 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTCGG......................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
............................................................CGTGTCTTGAAGACCCGTCAGTCTCGGG........................................................................................................................................ 28 1 4 0.25 1 1 0 0 0 0
.............................................................GTGTCTTGAAGACCCGTCAGTCTCGGC........................................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0
............................................................GGTGTCTTGAAGACCCGTCAGTC............................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0
.......AGCTGAGGACGGGGAAAACGGC................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
.............................................................GTGCCTTGAAGACCCATCAGTCTCGGGAAA..................................................................................................................................... 30 3 4 0.25 1 0 0 1 0 0
.................................................................................TCTCGGGAATCACTAAACTTCC......................................................................................................................... 22 0 4 0.25 1 0 1 0 0 0
......AAGCTGAGGACGGGGAAAACG..................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
.............................................................GGGTCTTGAAGACCCGTCAGTCT............................................................................................................................................ 23 1 4 0.25 1 0 1 0 0 0
..................GGGTAAACGGCGGGCG.............................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

AGGGTCTTCGACTCCTGCCCCTTTTGCCGCCTGCTCCGCGCCAGTCGCGCCACTACTTCTCCACAGAACTTCTGGGCAGTCAGAGCCCTTAGTGATTTGAAGGGGTGTCATTGGGGAATGATTGCAATTTGCTATTTGTTTTGATATATAAGTTTGTGAGATTTAAGCAGCTTCTATAGTCATCGCTGCTGTGGCTCGGCAAAGGGCCACTTCCCCGGTCTCCC
*****************************************************((((.((((((((......)))..(((((.........)))))...(((((....)))))..(((...))).................))))))))).............************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
 V056
head
............................................................................CAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 25 0 4 35.00 140 59 80 0 1 0 0
.............................................CGCGCCACTACTTCTCCACAGAACTT......................................................................................................................................................... 26 0 1 34.00 34 16 14 3 1 0 0
.............................................................................AGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 24 0 4 13.00 52 45 7 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAAGTT...................................................................... 26 0 4 12.50 50 42 5 1 2 0 0
.............................................................................................................................................................GAGATTTAAGCAGCTTCTATAGTCAT......................................... 26 0 3 12.00 36 34 1 1 0 0 0
..............................................................................GTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 23 0 4 10.50 42 41 1 0 0 0 0
.............................................CGCGCCACTACTTCTCCACAGAACT.......................................................................................................................................................... 25 0 1 9.00 9 4 5 0 0 0 0
............................................................................................................................................................TGAGATTTAAGCAGCTTCTATAGTCAT......................................... 27 0 3 6.33 19 16 1 0 2 0 0
...........................................................................................................................................................GTGAGATTTAAGCAGCTTCTATAGTCAT......................................... 28 0 2 5.00 10 8 1 0 0 1 0
...........................................................................GCAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 26 0 4 4.75 19 17 2 0 0 0 0
..............................................................................................................................................................AGATTTAAGCAGCTTCTATAGTCAT......................................... 25 0 3 4.67 14 12 1 0 0 1 0
.......................................................................CTGGGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 26 0 4 3.50 14 13 0 1 0 0 0
.................................................................................................................................TGCTATTTGTTTTGATATATAAGTT...................................................................... 25 0 4 3.25 13 11 1 0 1 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 27 0 4 3.25 13 13 0 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAAGT....................................................................... 25 0 4 3.00 12 12 0 0 0 0 0
..............................................GCGCCACTACTTCTCCACAGAACTT......................................................................................................................................................... 25 0 1 3.00 3 2 0 0 1 0 0
......................................................................................................................................................................GCAGCTTCTATAGTCATCGCTGCTGT................................ 26 0 3 2.67 8 8 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 24 0 4 2.50 10 10 0 0 0 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 25 0 4 2.50 10 10 0 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 27 0 4 2.50 10 9 1 0 0 0 0
...............................................................................................................................................................GATTTAAGCAGCTTCTATAGTCAT......................................... 24 0 3 2.33 7 5 0 1 1 0 0
..........................................................................................................................TGCAATTTGCTATTTGTTTTGATATAT........................................................................... 27 0 4 2.25 9 8 0 0 1 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 22 0 4 2.25 9 3 6 0 0 0 0
.......................................................................................................GGTGTCATTGGGGAATGATTGCAAT................................................................................................ 25 0 1 2.00 2 1 0 1 0 0 0
....................................................................................................................................................................................................CGGCAAAGGGCCACTTCCCCGGTCT... 25 0 2 2.00 4 2 2 0 0 0 0
.....................................................................................................GGGGTGTCATTGGGGAATGATTGCAAT................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
......................................................................................CCTTAGTGATTTGAAGGGGTGTCAT................................................................................................................. 25 0 4 1.75 7 0 2 2 3 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 24 0 4 1.75 7 6 1 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 24 0 4 1.75 7 3 4 0 0 0 0
..........................................................................................................................................................TGTGAGATTTAAGCAGCTTCTATAGTCAT......................................... 29 0 2 1.50 3 2 0 0 1 0 0
...........................................................................................................................................................GTGAGATTTAAGCAGCTTCTATAGTCA.......................................... 27 0 2 1.50 3 3 0 0 0 0 0
......................................................................TCTGGGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 27 0 4 1.50 6 5 1 0 0 0 0
..............................................................................GTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 22 0 4 1.50 6 6 0 0 0 0 0
............................................................................................................................................................TGAGATTTAAGCAGCTTCTATAGTCA.......................................... 26 0 3 1.33 4 4 0 0 0 0 0
............................................................................................................................CAATTTGCTATTTGTTTTGATATAT........................................................................... 25 0 4 1.25 5 3 2 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAAGTTT..................................................................... 27 0 4 1.25 5 5 0 0 0 0 0
......................................................................................CCTTAGTGATTTGAAGGGGTGTCATT................................................................................................................ 26 0 4 1.25 5 3 0 0 2 0 0
...........................................................................GCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 23 0 4 1.25 5 1 4 0 0 0 0
............................................TCGCGCCACTACTTCTCCACAGAACTT......................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.............................................CGCGCCACTACTTCTCCACAGAACTTTA....................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
....................CTTTTGCCGCCTGCTCCGCGCCAGT................................................................................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0 0
...........................................................................GCAGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 25 0 4 1.00 4 4 0 0 0 0 0
...............................................................CAGAACTTCTGGGCAGTCAGAGCCCTT...................................................................................................................................... 27 0 4 1.00 4 3 1 0 0 0 0
.............................................CGCGCCACTACTTCTCCACAGAACTTCT....................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................CATTGGGGAATGATTGCAATTTGCTATG........................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0
..............................CTGCTCCGCGCCAGTCGCGCCACTACT....................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................AGGGGTGTCATTGGGGAATGAT...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................CGTCATTGGGGAATGATTGCAAT................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................GGGGTGTCATTGGGGAATGATTGCAA................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TTGAAGGGGTGTCATTGGGGAATGATT..................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................GTGTCATTGGGGAATGATTGCAAT................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
.............................................................................AGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 23 0 4 1.00 4 4 0 0 0 0 0
.....................................................................................................GGGGTGTCATTGGGGAATGAT...................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.............................................CACGCCACTACTTCTCCACAGAACTT......................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
......................................CGCCAGTCGCGCCACTACTTCTCCACAG.............................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
.............................................CGCGCCACTACTTCTCCACAGATCGT......................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
.............................................CGCGCCACTACTTCTCCACAGAACTGC........................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................CGGGGTGTCATTGGGGAATGATTGCAAT................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
...........................................AACGCGCCACTACTTCTCCACAGAACT.......................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCTTAGTGATTTGAAGGTGTGTCAT................................................................................................................. 25 1 4 0.75 3 3 0 0 0 0 0
................................................................................CAGAGCCCTTAGTGATTTGAA........................................................................................................................... 21 0 4 0.75 3 1 2 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 26 0 4 0.75 3 3 0 0 0 0 0
..........................................................................................................................TGCAATTTGCTATTTGTTTTGATAT............................................................................. 25 0 4 0.75 3 2 1 0 0 0 0
.............................................................................................................................................................GAGATTTAAGCAGCTTCTATAGTCA.......................................... 25 0 3 0.67 2 2 0 0 0 0 0
...............................................................................................................................................................GATTTAAGCAGCTTCTATAGTCATC........................................ 25 0 3 0.67 2 2 0 0 0 0 0
................................................................................................................................CTGCTATTTGTTTTGATATATAAGTT...................................................................... 26 1 4 0.50 2 1 1 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTCAA........................................................................................................................... 25 1 4 0.50 2 0 2 0 0 0 0
..................................................................................................................................GCTATTTGTTTTGATATATAAGTTT..................................................................... 25 0 4 0.50 2 2 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGAT........................................................................................................................... 25 1 4 0.50 2 0 2 0 0 0 0
..........................................................................................................................................................TGTGAGATTTAAGCAGCTTCTATAGTCA.......................................... 28 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................CGCTGCTGTGGCTCGGCAAAGGGCCA............... 26 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGAAG.......................................................................................................................... 23 0 4 0.50 2 1 1 0 0 0 0
...............................................................................................................................................................................ATAGTCATCGCTGCTGTGGCTCGGC........................ 25 0 2 0.50 1 0 0 0 1 0 0
..........................................................................................................................................................................CTTCTATAGTCATCGCTGCTGTGGCT............................ 26 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................CGCTGCTGTGGCTCGGCAAAGGGC................. 24 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................TTGCAATTTGCTATTTGTTTTGATAT............................................................................. 26 0 4 0.50 2 2 0 0 0 0 0
......................................................................TCTGGGCAGTCAGAGCCCTTAGTGAT................................................................................................................................ 26 0 4 0.50 2 2 0 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTAGTGAT................................................................................................................................ 25 0 4 0.50 2 1 1 0 0 0 0
............................................................................................................................CAATTTGCTATTTGTTTTGATAT............................................................................. 23 0 4 0.50 2 0 2 0 0 0 0
.....................................................................................................................................................................................................GGCAAAGGGCCACTTCCCCGGTC.... 23 0 2 0.50 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATT............................................................................................................................... 21 0 4 0.50 2 0 2 0 0 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 28 0 4 0.50 2 2 0 0 0 0 0
...........................................................................GCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 22 0 4 0.50 2 1 1 0 0 0 0
...........................................................................................................................GCAATTTGCTATTTGTTTTGATATAT........................................................................... 26 0 4 0.50 2 2 0 0 0 0 0
........................................................................TGGGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 25 0 4 0.50 2 1 1 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 23 0 4 0.50 2 1 1 0 0 0 0
......................................................................................................................................................................GCAGCTTCTATAGTCGTCGCTGCTGT................................ 26 1 3 0.33 1 1 0 0 0 0 0
........................TGCCGCCTGCTCCGCGCCAGT................................................................................................................................................................................... 21 0 3 0.33 1 0 0 1 0 0 0
...........................................................................................................................................................CTGAGATTTAAGCAGCTTCTATAGTCAT......................................... 28 1 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................................AGAGATTTAAGCAGCTTCTATAGTCAT......................................... 27 1 3 0.33 1 0 1 0 0 0 0
............................................................................................................................................................CCCGATTTAAGCAGCTTCTATAGTCAT......................................... 27 3 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................................TGAGATTTAAGCAGCGTCTATAGTCAT......................................... 27 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................GTGGCTCGGCAAAGGGCCACTTCCCC........ 26 0 3 0.33 1 0 1 0 0 0 0
............................................................................................................................................................TGAGATTTAAGCAGCTTCTATAGTCATC........................................ 28 0 3 0.33 1 1 0 0 0 0 0
........CGACTCCTGCCCCTTTTGCCGCCTGCT............................................................................................................................................................................................. 27 0 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................................................TTAAGCAGCTTCTATAGTCATCGCT..................................... 25 0 3 0.33 1 1 0 0 0 0 0
.............................................................................................................................................................GAGATTTAAGCAGCGTCTATAGTCAT......................................... 26 1 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................................TGAGATTTAAGCAGCCTCTATAGTCAT......................................... 27 1 3 0.33 1 1 0 0 0 0 0
.............................................................................................................................................................GAGATTTAAGCAGCTTCTATAGT............................................ 23 0 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................................AAAGATTTAAGCAGCTTCTATAGTCAT......................................... 27 2 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................AGCAGCTTCTATAGTCATCGCTGCTGT................................ 27 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................AGCAGCTTCTATAGTCAT......................................... 18 0 3 0.33 1 0 0 1 0 0 0
.............................................................................................................................................................GACATTTAAGCAGCTTCTATAGTCAT......................................... 26 1 3 0.33 1 0 0 1 0 0 0
..............................................................................................................................................................AGATTTAAGCAGCTTCTATAGTCA.......................................... 24 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................AAGCAGCTTCTATAGTCAT......................................... 19 0 3 0.33 1 1 0 0 0 0 0
........CGACTCCTGCCCCTTTTGCCGCCTGC.............................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................ATACTTAAGCAGCTTCTATAGTCAT......................................... 25 2 3 0.33 1 0 0 0 0 1 0
.......................................................................................................................................TTGTTTTGATATATAAGTTTGTGAGAT.............................................................. 27 0 3 0.33 1 0 0 0 1 0 0
............................................................................CAGTCAGAGCCCTTCGTGATTTGAA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTAGTGATTC.............................................................................................................................. 27 1 4 0.25 1 0 1 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTAGTGATTCA............................................................................................................................. 28 2 4 0.25 1 1 0 0 0 0 0
................................................................................................................................CTGCTATTTGTTTTGATATATATGGT...................................................................... 26 3 4 0.25 1 0 1 0 0 0 0
.......TCGACTCCTGCCCCTTTTGCCGCCT................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0
..........................................................................TCGAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 27 3 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................TATTTGTTTTGATATATAAGTT...................................................................... 22 0 4 0.25 1 0 1 0 0 0 0
..................................................................................................................................GCTATTTGTTTTGATATATAAGTT...................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................CTGCTATTTGTTTTGATATATAAGTTT..................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 22 0 4 0.25 1 0 1 0 0 0 0
.....................................................................................CCCTTAGTGATTTGAAGGTGTGTCAT................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................TTTGCTATTTGTTTTGATATATAAGT....................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
.........................................................................................................................TTGCAATTTGCTATTTGTTTTGATATAT........................................................................... 28 0 4 0.25 1 0 1 0 0 0 0
......................................................................CCTGGGCAGTCAGAGCCCTTAGTGATT............................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0 0
........................................................................TGGGCAGTCAGAGCCCTTAGTGAT................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAAGGGCCTCGTCCCTGGT..... 19 3 4 0.25 1 1 0 0 0 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGTGAGT............................................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0
..............................................................................GTCAGAGCCCTTAGTGATTT.............................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGAGT............................................................................................................................... 23 1 4 0.25 1 0 1 0 0 0 0
........................................................................................................................ATTGCAATTTGCTATTTGTTTTGATAT............................................................................. 27 0 4 0.25 1 1 0 0 0 0 0
...........................................................................GAAGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
.....CTTCGACTCCTGCCCCTTTTGCCGCCT................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0
...................................................................................AGCCCTTAGTGATTTGAAGGTGTGTCAT................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTG............................................................................................................................. 23 0 4 0.25 1 0 1 0 0 0 0
.......TCGACTCCTGCCCCTTTTGCCTCCT................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0
.....................................................................................CCCTTAGTGATTTGAAGGGGTGTCATT................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGT................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0
.....................................................................................................................................................................AGCAGCTACTATAGTCAAC........................................ 19 2 4 0.25 1 1 0 0 0 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGAAGGT........................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0
.........................................................................CTGCAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 28 2 4 0.25 1 1 0 0 0 0 0
.............................................................................AGTCAGAGCCCTAAGTGATTTGAA........................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGAAT.......................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
.........................................................................CGGCAGTCAGAGCCCTTAGTGAT................................................................................................................................ 23 1 4 0.25 1 0 1 0 0 0 0
................................................................AGAACTTCTGGGCAGTCAGAGCCCTT...................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
................................................................................CAGAGCCCTTAGTGATTTGAAGGGGTGT.................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
.......................................................................................................................GATTGCAATTTGCTATTTGTTTTGATAT............................................................................. 28 0 4 0.25 1 1 0 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTCGTGATT............................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................TTTGCTATTTGTTTTGATATA............................................................................ 21 0 4 0.25 1 1 0 0 0 0 0
.............................................................................AGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
....................................................................CTTCTGGGCAGTCAGAGCCCTT...................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAGG........................................................................ 24 1 4 0.25 1 0 1 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCTTAG.................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0
.......................................................................CTGAGCAGTCAGAGCCCTTAGTGAT................................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0
...................................................................................................................................CTATTTGTTTTGATATATAAGTT...................................................................... 23 0 4 0.25 1 0 1 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGAAG.......................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGAAC.......................................................................................................................... 23 1 4 0.25 1 0 1 0 0 0 0
..............................................................................GTCGGAGCCCTTAGTGATTTGAA........................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATGTGAA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAAG........................................................................ 24 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................TGCTATTTGTTTTGATATATAAGTTT..................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
................................................................................CAGAGCCCTTAGTGATTT.............................................................................................................................. 18 0 4 0.25 1 0 1 0 0 0 0
................................................................................CAGAGCCCTTAGTGATTTGA............................................................................................................................ 20 0 4 0.25 1 0 1 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCACTTAGTGATT............................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................TTGCTATTTGTTTTGATATATAAGGT...................................................................... 26 1 4 0.25 1 0 1 0 0 0 0
.................................................................................................................................TGCTATTTGTTTTGCTATATAAGTT...................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATTTCAA........................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
.............................................................CACAGAACTTCTGGGCAGTCAGAGCCCT....................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
............................................................CCACAGAACTTCTGGGCAGTCAGAGCC......................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0 0
...........................................................................CCAGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
.......................................................................................................................GATTGCAATTTGCTATTTGTTTTGATA.............................................................................. 27 0 4 0.25 1 1 0 0 0 0 0
..........................................................................GGCTGTCAGAGCCCTTAGTGATTTGAA........................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
...........................................................................CCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 23 1 4 0.25 1 1 0 0 0 0 0
.....................................................................TTCTGGGCAGTCAGAGCCCTTAGT................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0
.........................................................................GGGCAGTCAGAGCCCTTAGTGATTTGA............................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGAAC.......................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTAGAA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
..............................................................................GTCAGAGCCCTTAGTGATT............................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0
...............................................................................CCAGAGCCCTTAGTGATTTGAAGTT........................................................................................................................ 25 3 4 0.25 1 0 1 0 0 0 0
..........................................................................TGCAGTCAGAGCCCTTAGTGATGT.............................................................................................................................. 24 2 4 0.25 1 0 1 0 0 0 0
.............................................................................AGTCAGAGCCCTTAGTGATTTGAAG.......................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
...............................................................................TCAGAGCACTTAGTGATTTGGA........................................................................................................................... 22 2 4 0.25 1 0 1 0 0 0 0
.........................................................................GGGCCGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0
......................................................................ACTGGGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0
.............................................................................TTACAGAGCCCTTAGTGATTTGA............................................................................................................................ 23 3 4 0.25 1 1 0 0 0 0 0
.....................................................................................CCCTTAGTGATTTGAAGGGGTGTCAT................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0
...........................................................................GCAGTCAGAGCCCTTAGTGATTTGAAG.......................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................GTGCTATTTGTTTTGATATATAAGTT...................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................TGATTGCAATTTGCTATTTGTTTTGATAT............................................................................. 29 0 4 0.25 1 0 1 0 0 0 0
......................................................................TCTGGGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 28 0 4 0.25 1 0 1 0 0 0 0
.............................................................................AGTCAGAGCCCTTAGTGATTTGGA........................................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGTA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGGTTTGAA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
........................................................................................................................ATTGCAATTTGCTATTTGTTTTGAT............................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................TGCTATTTGTTTGGATATATAAGT....................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
.......................................................................CTGGGCAGTCAGAGCCCT....................................................................................................................................... 18 0 4 0.25 1 1 0 0 0 0 0
.......TCGACTCCTGACCCTTTTGCCGCCT................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................CGCAGTCAGAGCCCTTAGTGATTT.............................................................................................................................. 24 1 4 0.25 1 0 1 0 0 0 0
............................................................................CAGTCAGAGCCCTGAGTGATTTGAA........................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCACAGCCCTTAGTGATTTGAA........................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................TAGTGATTTGAAGGGGTGTCAT................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................CTGCTATTTGTTTTGATATATAACT....................................................................... 25 2 4 0.25 1 0 1 0 0 0 0
...............................................................................TCAGAGCCCTTAGTGATTTGA............................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................ATTTGAAGGGGTGTCATT................................................................................................................ 18 0 4 0.25 1 1 0 0 0 0 0
............................................................................CAGTCAGAGCCCTTAGTGATTTGGA........................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0
..........................................................................GGCAGTCAGAGCCCTTAGTGATTTG............................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................ATTTGCTATTTGTTTTGATATATAAGT....................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................TGCTATTTGTTTTGATATATAAGT....................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
........................................................TTCTCTACAGAAGTACTGGG.................................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
......................................................................................CCTCAGTGATGGGAAGGG........................................................................................................................ 18 3 12 0.08 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:2363388-2363611 - dmo_1390 TCCCAGAAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GGCGGA----CGAGGCGC-----------------G-----GTCAGCGCGGTGATGAAGAG------------------------------GTGTCTTGAAGACCCGTCAGTCTCGGGAATCACTAAACTTCCCCACAGTAACCCCTTACTAACGTTAAACGATAAACAAAACTATATATTCAAACACTCTAAATTCGTCGAAGATATCAGTAGCGACGACACCGAGCCGTTTCCCGGTGAAGGGGCCAGAGGG
droVir3 scaffold_12847:207171-207404 + TCCAGGGCACGC------------A-AC---TGCCCACGAGTAAGCGAAGGATGAGAGCAACACCCGTCGCCCAATA-------------GGCATAGTAAAGTGTCAGCCGCACTGA-GAGAATAGGGCA-TTCACAAATAAGTCAAGAGTAAGTTAACCAGTAAGCTGAACTTTCAGATGGAACCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGCGGGGACACCGAGCCTTTCCCCGGGCCGGGAGCCGCAGGC
droGri2 scaffold_15126:4444604-4444663 - TTACTTACATTA------------A-AT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGTTGACTATATATATATAT------------------ACTTTATT------------------------------AGTTGACTATAT
droWil2 scf2_1100000004822:178784-178847 - GTGATGAAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCCTTGGTTACTATTGTTCTTAGCCACGG------------------------------------------------------------------T--------------------------------------------GACC
dp5 Unknown_singleton_1767:1428-1492 - TCCTGGAAGCGA------------A-GC---AGA---------------------------------C---------AACGTACCGG----TCGG-----------------GGTA--ACAGATGAGACA-TGCAAAG------------------------------GTGG--------------------------------------------------------------------------------------------------------------G--------------------------------------------TTGA
droPer2 scaffold_122:3638-3699 + GCCCTGGAACCG------------A-AGCGTAGA-----------------------CGA-------------------CGCTCAAG----GAGG-----------------GGCA--ACGGGCAAGGCA-TATG---------------G-----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------GAAG
droAna3 scaffold_9881:7556-7617 + CCGCAGGCGTAG------------G-GC--A-GG------A--------------GAAAA------AG---------GAGA----AT----GTAC-----------------AATC--ACCAATAACGCA----------------ACAAT-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------AGGA
droBip1 scf7180000394528:956-1035 + AATATCAAAAAATACCAAAATTTA-------------------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------ACA---AAAAATTACTAAAATTAACAAATAAACACAACAAAATACCAAAAA------------------AC--------------------------------------------TCTA
droKik1 scf7180000299576:8957-9023 + ACGGCCAGAGCG----ACGACCCA----------------G------------------C------ACAGACGAATGGACGCACCAG----GCAG-----------------GGTG--ATGACCACGA----------------------C-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------ACGA
droFic1 scf7180000454132:13966-14012 - TGACGCAGACGT------------C-CC--C-GA------A------------------C------ACCGCCTAACA-------------GTCTC-----------------G-----ATCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------GCAG
droEle1 scf7180000491028:1999362-1999417 + GTTATGCTAAAA------------A-T-----AA---------------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATATTTAAACATTTTTAAATTTCTAAAAAT--------------------------------------------TTTA
droRho1 scf7180000771260:6712-6792 + CCCTTGACGCGA------------G-CG--ACGA---------------------CGACA------TC---------A-----CCGG----GCCA-----------------AGCA-ACCCGGCGCGGTC-TGGAACT------AC------------------GAAATAA-CTTTAAG------------------------------------------------------------------------------------------------------AT--------------------------------------------CCAT
droBia1 scf7180000302421:1222186-1222258 + ACTACTATTTCG------------A-GG--ATGG---------------------GGAGA------AG---------AACC----AGGACGGGCC-----------------A-----GTCAGCACGGAG-------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGAG------------------------------TGATCTCAAGGA
droTak1 scf7180000414806:2602-2701 + TCCCGAGGCCGG------------T-AC--C-GG------T--------------CGAAC------AG---------GACAGC----CCAGACGC-----------------A-----GCGAAGAC-----------G------AC------------------AGAGCAG-GTTTA----------GGGTCGGGTGACCCTAAACTCCAATACAGAA----------------------------------------------------------------A--------------------------------------------GCCC
droEug1 scf7180000409885:145462-145500 - AGCCAGAAACCC----AGAATCTGGTAC--C-CG------G--------------AAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------AG------------------------------GACG
droSim2 2l:23084236-23084253 + CGAGAAAGAGGA------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------GGGA
droSec2 scaffold_2671:252-291 + ACACTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGGCACAAACTTCACCAACGACGA------------------------------CACC
droYak3 v2_chrUn_001:300645-300689 + ATACGCAAGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAATTCATCGAAGATAGAAGCACCGACG---------------------------------AC
droEre2 scaffold_4929:22017920-22017932 - GCCAAAGAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCCCAGAAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GGCGGA----CGAGGCGC-----------------G-----GTCAGCGCGGTGATGAAGAG------------------------------GTGTCTTGAAGACCCGTCAGTCTCGGGAATCACTAAACTTCCCCACAGTAACCCCTTACTAACGTTAAACGATAAACAAAACTATATATTCAAACACTCTAAATTCGTCGAAGATATCAGTAGCGACGACACCGAGCCGTTTCCCGGTGAAGGGGCCAGAGGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGA............................23212.50252200021
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGC..........................2526.0012800040
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAG...........................2423.507500002
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCG........................2723.507600001
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCT............................................................................................................................................2342.7511710021
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGT.......................2822.004400000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGTT......................2922.004300010
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTC.............................................................................................................................................2242.008300050
......AAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GGC...........................................................................................................................................................................................................................................................2341.757700000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCC.........................2621.503300000
...........................................................................................................................................................................................................................................................ATATATTCAAACACTCTAAATTCGTCG.....................................................2721.503300000
......AAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GG............................................................................................................................................................................................................................................................2241.255400010
.........................................................................................................................................................................................................................................................................................ATATCAGTAGCGACGACACCGAG...........................2321.002200000
...........................................................................................................................................................................................................................................................ATATATTCAAACACTCTAAATTCG........................................................2421.002200000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACC..............................2121.002000020
.........................................................................................................................................................................................................................................................................................ATATCAGTAGCGACGACACCGA............................2221.002200000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTC...........................................................................................................................................2440.753300000
............................................................................................................................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCG........................2320.501100000
.........................................................................................................................................................................................................................................................................................ATATCAGTAGCGACGACACCGAGC..........................2420.501100000
......................................................................................................................................................................................................CACTAAACTTCCCCACAGTAACCCC............................................................................................................2540.502200000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCG.............................2220.501100000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCGC.......................2820.501100000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTCGGGAA......................................................................................................................................2940.502000002
...........................................................................................................................................................................................................................................................................................ATCAGTAGCGACGACACCGAGC..........................2220.501000010
..........................................................................................................................................................................................................................................................TATATATTCAAACACTCTAAATTCGTCGT....................................................2920.501100000
..................................................................................................................................................................................................................................................................................................GCGACGACACCGAGCCGTTTCCC..................2320.501100000
........................................................................................................................................................................................................................................................................................GATATCAGTAGCGACGACACCGAGCCA........................2720.501100000
............................................................................................................................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCGTC......................2520.501100000
............................................................................................................................................................................................................................................................................................TCAGTAGCGACGACACCGAGCCGT.......................2420.501100000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTCGGGA.......................................................................................................................................2840.502200000
......................................................................................................................................................................................................CACTAAACTTCCCCACAGTAACCC.............................................................................................................2440.502200000
..........................................................................................................................................................................................................................................................................................TATCAGTAGCGACGACACCGAGCCG........................2520.501100000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGT..............................................................................................................................................2140.502200000
..........................................................................................................................................................................................................................................................TATATATTCAAACACTCTAAATTCG........................................................2520.501100000
...........................................................................................................................................................................................................................................................................................ATCAGTAGCGACGACACCGA............................2020.501100000
.........................................................................................................................................................................................................................................................................................ATATCAGTAGCGACGACACCG.............................2120.501100000
..........................................................................................................................................................................................................................................................................................TATCAGTAGCGACGACACCGAGC..........................2320.501100000
...................................................................................................................................................................................................................................................................................TCGAAGATATCAGTAGCGACGACACC..............................2620.501000010
.........................................................................................................................................................................................................................................................................................ATATCAGTAGCGACGACACCGAGCC.........................2520.501100000
....................................................................................................................................................................................................................................................CAAAACTATATATTCAAACACTCT...............................................................2430.331100000
......................................................................................................................................................................................................................................................AAACTATATATTCAAACACTCTAA.............................................................2430.331100000
.............................................................................................................................................................................................................................................................................................................GAGCCGTTTCCCGGTGAAGGG.........2130.331100000
......................................................................................................................................................................................................................................................AAACTATATATTCAAACACTCTAAATT..........................................................2730.331100000
.........................................................AAA------AC---------GGCGGA----CGAGGCGC-----------------...........................................................................................................................................................................................................................1930.331000010
......................................................................................................................................................................................................................................................AAACTATATATTCAAACACTCTAAAT...........................................................2630.331100000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTCG..........................................................................................................................................2540.251100000
......AAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------..............................................................................................................................................................................................................................................................2040.251100000
......AAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GGCG..........................................................................................................................................................................................................................................................2440.251100000
........................................................................................................................................................................................................................................TTAAACGATAAACAAAACTATATAT..........................................................................2540.251100000
...................................................................................................................................................................................................................................TAACGTTAAACGATAAACAAAACT................................................................................2440.251100000
....AGAAGCTG------------A-GG--ACGG---------------------GGAA................................................................................................................................................................................................................................................................................1940.251000010
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTCGG.........................................................................................................................................2640.251100000
........................................................................................................................................................................GTGTCTTGAAGACCCGTCAGTCTCGGC........................................................................................................................................2740.251100000
.........................................................................................................................................G------------------------------GTGTCTTGAAGACCCGTCAGTC.............................................................................................................................................2340.251100000
.......AGCTG------------A-GG--ACGG---------------------GGAAA------AC---------GGC...........................................................................................................................................................................................................................................................2240.251100000
............................................................................................................................................................................................TCTCGGGAATCACTAAACTTCC.........................................................................................................................2240.251000010
......AAGCTG------------A-GG--ACGG---------------------GGAAA------AC---------G.............................................................................................................................................................................................................................................................2140.251100000
droVir3
TCCAGGGCACGC------------A-AC---TGCCCACGAGTAAGCGAAGGATGAGAGCAACACCCGTCGCCCAATA-------------GGCATAGTAAAGTGTCAGCCGCACTGA-GAGAATAGGGCA-TTCACAAATAAGTCAAGAGTAAGTTAACCAGTAAGCTGAACTTTCAGATGGAACCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGCGGGGACACCGAGCCTTTCCCCGGGCCGGGAGCCGCAGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGG.....................................22208.6517300530371054000020000000000017020130000605015900000000000000000000040
...............................................AAGGATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................22207.4014840833258962000300000000006131517005102000009000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................25206.751353402913001100100000000000050394020150801320001000000100101000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCC..................................................................................................................................................................................................................................................................26206.5013070101610001000000000000002315504020116004001001020000201000000000
...............................................AAGGATGAGAGCAACACCCGTCG.....................................................................................................................................................................................................................................................................23206.35127000061411020010000001007011200151641010086010200000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGG....................................23206.201245041013001601100000000000001104000809003016300000000000000000002000
...............................................AAGGATGAGAGCAACACCCGTCGC....................................................................................................................................................................................................................................................................24206.0512170000272001000000000700041332121113100050030000010000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGC.......................................20205.551110025010000300302000000000001204600009002026900000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGG....................................21204.3086000001400000100000003006190221000574001030000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGG.....................................20203.807600000513001400000000070005020001660001700000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGG...................................24203.70745040250001000000000001000150011000000407000001000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGA..................................25202.705410023140001000010000000000070000020020001010001000000000000000000
...............................................AAGGATGAGAGCAACACCCG........................................................................................................................................................................................................................................................................20202.50502020042010000000000000000136113270003101100000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGAC.................................26202.00405016300000020000000001000010011000050003000101000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCG......................................21201.7034000090000100000000000000010016030410204100000000000000000001000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGAC.................................24201.60320000001000201000000000010012120002004330000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGG...................................22201.4529000000100000000000000002400440004000550000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGA..................................23201.3527001000000000300000000002408220010001210000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCCA.................................................................................................................................................................................................................................................................27201.2525404110000000000000000000115101013000100100000000000000000000000
...............................................AAGGATGAGAGCAACACCC.........................................................................................................................................................................................................................................................................19201.1523101010001200000000000000000510060400100000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGAA................................................................................................................................................................2461.006000010000000000000000000101300000000000000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGA.................................................................................................................................................................2360.835000000100000000000000000001110100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCG......................................19200.8016000000000020100000001000103330000001100000000000000000000000000
.............................................................................................................................................................................TTCAGATGGAACCCGAAGTTATCGTTA...................................................................................................................................2740.753000000000000000000000000000000030000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAG........................................19200.7515008000000000000000000000020210000000002000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGAAC...............................................................................................................................................................2560.674000100000000000000000000102000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACA................................27200.6513108000000000000000000000000000000020200000000000000000000000000
........................................................................................................................................................................................CCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGAC......................................................2750.603000000000000000000000000000000000000000000000100000000000020000
...............................................AAGGATGAGAGCAACACCCGT.......................................................................................................................................................................................................................................................................21200.5511000001200000000000000002000400000000001000000010000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGAACTT.............................................................................................................................................................2760.503001000000000000000000000110000000000000000000000000000000000000
................................................................................................................ACTGA-GAGAATAGGGCA-TTCACA..................................................................................................................................................................................................2320.501000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGC.......................................18200.459000000100000000000001000002220000001000000000000000000000000000
...............................................AAGGATGAGAGCAACACC..........................................................................................................................................................................................................................................................................18200.408100000120100000000000000000110000000010000000000000000000000000
........................................................................................................................................................................................CCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGACGA....................................................2950.402000000000000000000000000000000000000000010000000000000000010000
......................................................................................................................................................TAAGTTAACCAGTAAGCTGAACTTTCAG.........................................................................................................................................................2850.402000000000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACAC...............................26200.408000000000000000000000000102300100001000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACA................................25200.408000000000000000000000000004100001000200000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTTTCAGAT.......................................................................................................................................................2860.332000000000000000000000000020000000000000000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGAACT..............................................................................................................................................................2660.332001100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCT...................................................................................................................................................................2160.332000000000000000000000000000200000000000000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTTTC...........................................................................................................................................................2470.292000000000000000000000000000100000010000000000000000000000000000
.............................................................................................................................................................................TTCAGATGGAACCCGAAGTTATCGTT....................................................................................................................................2640.251000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCA.........................................18200.255000020000000000000000000000100110000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTATCGTTA...................................................................................................................................2640.251000000000000000000000000000000010000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCCAA................................................................................................................................................................................................................................................................28200.255003000000000000000000000001000000000100000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGC.......................................26200.255000001000000000000000000000021010000000000000000000000000000000
.............................................................................................................................................................................TTCAGATGGAACCCGAAGTTATCGTTC...................................................................................................................................2740.251000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................CCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAG........................................................2550.201000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................CGCACTGA-GAGAATAGGGCA-TTC.....................................................................................................................................................................................................2350.201000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................CACTGA-GAGAATAGGGCA-TTC.....................................................................................................................................................................................................2150.201000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................AACCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCA.........................................................2650.201000000000000000000000000000010000000000000000000000000000000000
..........................................................................ATA-------------GGCATAGTAAAGTGT..................................................................................................................................................................................................................................18200.204000000000000000000000002001000000000100000000000000000000000000
.........................................................................................................................................................................................................................................C------------------------------------GTCAGACGAAGACAACAGCAGCGG.....................................25200.204000000000000000000000000000020000100000000000000000000000000010
.............................................................................................................CGCACTGA-GAGAATAGGGCA-TTCA....................................................................................................................................................................................................2450.201000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................CCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGACG.....................................................2850.201000000000000000000000000000000000000000000100000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCA..................................................................................................................................................................................................................................................................26200.204000000000000000000000000031000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGACGAAGACAACAGCAGCGGG....................................22200.204004000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCCGAAGTTATCGTTAT------------------------------ATC------------------------------------GTCAGA.......................................................2650.201000000000000000000000000000000000000000000000000001000000000000
...............................................AAGGATGAGAGCAACACCCGTCGT....................................................................................................................................................................................................................................................................24200.204000000000000000000000000101100010000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCT...................................................................................................................................................................................................................................................................25200.204000010000000000000000000001000001000001000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGAT.................................24200.204000000000000000000000000001300000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACACC..............................27200.204000000000000000000000000002000000001100000000000000000000000000
.................................................................................................................................................................................................................................................................................AGACGAAGACAACAGCAGCGGGGA..................................24200.204004000000000000000000000000000000000000000000000000000000000000
................................................AGGATGAGAGCAACACCCGTCGCCC..................................................................................................................................................................................................................................................................25200.204004000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGTAAGTTAACCAGTAAGCTGAACTTT............................................................................................................................................................2860.171000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTTTCAGA........................................................................................................................................................2760.171000000000000000000000000000000000001000000000000000000000000000
.........................................................................AATA-------------GGCATAGTAAAGTGT..................................................................................................................................................................................................................................19200.153000000001020000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TC------------------------------------GTCAGACGAAGACAACAGCAGC.......................................24200.153000000000000000000000000000010010000000100000000000000000000000
................................................AGGATGAGAGCAACACCCGTCGC....................................................................................................................................................................................................................................................................23200.153003000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CGCACTGA-GAGAATAGGGC..........................................................................................................................................................................................................19200.153000010000010000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................C------------------------------------GTCAGACGAAGACAACAGCAGCG......................................24200.153000000000000000000000000000010110000000000000000000000000000000
.........................................................................................................................................................................................................................................C------------------------------------GTCAGACGAAGACAACAGCAGC.......................................23200.153002000000000000000000000000010000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTTTG....................................................................................................................................................................................................................................................................24200.153000000000020000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACACCGAGC..........................33200.153000000000000000000000000000000000000000000000010100001000000000
.................................................................................................................................................................................................................................................................................AGACGAAGACAACAGCAGCGG.....................................21200.153003000000000000000000000000000000000000000000000000000000000000
................................................AGGATGAGAGCAACACCCGTCG.....................................................................................................................................................................................................................................................................22200.153003000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGAT.................................26200.153000010000000000000000000000001000010000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAT........................................19200.153000000000000000000000000010000000000001100000000000000000000000
...............................................................................................................................................................................................................................................................................TCAGACGAAGACAACAGCAGCG......................................22200.153001000000000000000000000000020000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCC.....................................................................................................................................................................................................................................................................23200.153100000000000000000000000000011000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGACGAAGACAACAGCAGC.......................................19200.153002000000000010000000000000000000000000000000000000000000000000
..................................................GATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................19200.153000000001110000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCGGG....................................20200.153001000000100000000000001000000000000000000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTT.............................................................................................................................................................2270.141000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTTTCA..........................................................................................................................................................2570.141000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................AGTTAACCAGTAAGCTGAACTTTTTT.........................................................................................................................................................2670.141000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTCAGACGAAGACAACAGCAG........................................21200.102000000000000000000000000000100010000000000000000000000000000000
............................................................................................................................................................................TTTCAGATGGAACCCGAAGTTAT........................................................................................................................................23200.102000000000000000000000000000010010000000000000000000000000000000
.............................................CGAAGGATGAGAGCAACACCCG........................................................................................................................................................................................................................................................................22200.102100000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................TGAACTTTCAGATGGAACCCGAAGT...........................................................................................................................................25200.102000000000000000000000000000001001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGT....................................21200.102000000000000000000000000001100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACACCG.............................28200.102000000000000000000000000000000000000200000000000000000000000000
..................................................GATGAGAGCAACACCCGTCGCCC..................................................................................................................................................................................................................................................................23200.102000000100000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTATCG......................................................................................................................................23200.102000000000000000000000000000020000000000000000000000000000000000
........................................................................................................................................................................................................................................TC------------------------------------GTCAGACGAAGACAACAGC..........................................21200.102000000000000000000000000000000000010001000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGT.......................................20200.102000000000000000000000000000000000200000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACT................................27200.102000000000000000000000000000000000100001000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGT....................................23200.102000000000000010000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCGGGG...................................21200.102002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTAT........................................................................................................................................21200.102000000000100000000000000000000000000001000000000000000000000000
................................................AGGATGAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACAC...............................28200.102001000000000000000000000010000000000000000000000000000000000000
...................................CACGAGTAAGCGAAGGATGAGAGC................................................................................................................................................................................................................................................................................24200.102000000000000000000002000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGACGAAGACAACAGCAGCGGGG...................................23200.102002000000000000000000000000000000000000000000000000000000000000
....................................................TGAGAGCAACACCCGTCGC....................................................................................................................................................................................................................................................................19200.102000000000100000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACAA...............................26200.102000000000000000000000000100000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTCAGACGAAGACAACAGCAGCGG.....................................24200.102001000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCAGACGAAGACAACAGCAGC.......................................21200.102000000010000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGACACCGA............................29200.102000000000000100000000000001000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGA....................................................................................................................................................................................................................................................................24200.102000000001000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACACC..............................29200.102200000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGG..................................25200.102000000000000000000000000000000000000000000000000100010000000000
..................................................GATGAGAGCAACACCCGTCG.....................................................................................................................................................................................................................................................................20200.102000000000000000000000001000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGT.....................................20200.102000000100000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGA...................................22200.102000000000000000000000000001010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCAGACGAAGACAACAGCAGCGG.....................................23200.102000000000000000000001001000000000000000000000000000000000000000
.............................................................................................................................................................................TTCAGATGGAACCCGAAGTTATCGTAT...................................................................................................................................27160.061000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTATCGT.....................................................................................................................................24170.061000000000000000000000000000000000001000000000000000000000000000
..........................AC---TGCCCACGAGTAAGCG............................................................................................................................................................................................................................................................................................18170.061000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AT------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGC.......................................27200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGATC................................25200.051000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCG......................................18200.051000000000000000000001000000000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCT..................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCT.....................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCT......................................21200.051000000000000000000000000010000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGTTT..................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGATG................................27200.051000000000000000000000000000000000000001000000000000000000000000
...............................................AAGGATGAGAGCAACACGTC........................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGTAA..................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................C------------------------------------GTCAGACGAAGACAACAGCAGCGGG....................................26200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................CGCACTGA-GAGAATAGGGCA-TT......................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................GAGAGCAACACCCGTCGCCC..................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGATG................................25200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................AT------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAG........................................26200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGTTA...................................22200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCGGGGACA................................24200.051000000000000000000000000000000000010000000000000000000000000000
..........................................AAGCGAAGGATGAGAGCAACACCC.........................................................................................................................................................................................................................................................................24200.051100000000000000000000000000000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTT......................................................................................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
..........................................AAGCGAAGGATGAGAGCAACAC...........................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGACACCGAGCCT........................35200.051000000000000000000000000000000000000000000000000001000000000000
................................................AGGATGAGAGCAACACCCGTCGCCCAA................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTATC.......................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
................................GCCCACGAGTAAGCGAAGGAT......................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000001000000000000000000000000000
.............................................CGAAGGATGAGAGCAACACCCGTCG.....................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CGAAGACAACAGCAGCGGGGAC.................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCGGGGA..................................22200.051000000000000000000000000000100000000000000000000000000000000000
..............................................GAAGGATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................23200.051000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGATC................................27200.051100000000000000000000000000000000000000000000000000000000000000
...................................................ATGAGAGCAACACCCGTCGCTT..................................................................................................................................................................................................................................................................22200.051000000100000000000000000000000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTTTA....................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGATT................................25200.051000000000000000000000000100000000000000000000000000000000000000
..............................................GAAGGATGAGAGCAACACC..........................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTCAGACGAAGACAACAGC..........................................19200.051000000000000000000000000000000010000000000000000000000000000000
...............................TGCCCACGAGTAAGCGAAGGATGA....................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCCG.................................................................................................................................................................................................................................................................27200.051100000000000000000000000000000000000000000000000000000000000000
...............................TGCCCACGAGTAAGCGAAGGATGAGA..................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
..................................................GATGAGAGCAACACCCGT.......................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAG...........................................22200.051000010000000000000000000000000000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGAAG..................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGAG.................................26200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AT------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAT........................................26200.051000000000000000000000000000100000000000000000000000000000000000
.........................................TAAGCGAAGGATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CGAAGACAACAGCAGCGGGGACACCGAA...........................28200.051000000000000000000000000000000000000100000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCCCC.................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000100000000000000000000000
.........................................TAAGCGAAGGATGAGAGCAACACCC.........................................................................................................................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
.................................CCCACGAGTAAGCGAAGGATGAA...................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACGAAGACAACAGCAGCGGGGACACC..............................26200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGAAC................................27200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGATTT...............................26200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGT.....................................22200.051000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................CGCACTGA-GAGAATAGGGCA-T.......................................................................................................................................................................................................21200.051000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGACAACAGCAGCGGGGAC.................................19200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................ACTTTCAGATGGAACCCGAAGTT..........................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................TGAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCTTT.................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAGC..........................................23200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCCCGGGCCGGGAGCCGCAG..21200.051000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................C------------------------------------GTCAGACGAAGACAACAGCAGCGGGGA..................................28200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................GAAGACAACAGCAGCGGG....................................18200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TTCAGATGGAACCCGAAGTTAT........................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCCCGGGCCGGGAGCCGCA...21200.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................TGAACTTTCAGATGGAACCCGAAGTT..........................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCAGACGAAGACAACAGCAG........................................20200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGCG......................................27200.051000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGAAGACAACAGCAGCGGGGATT................................27200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................GAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
...............................TGCCCACGAGTAAGCGAAGGATGAGAG.................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAGCGG.....................................28200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCAGACGAAGACAACAGCAGCGGGGA..................................26200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TC------------------------------------GTCAGACGAAGACAACAGCAGCGG.....................................26200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................AT------------------------------ATC------------------------------------GTCAGACGAAGACAACA............................................22200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................AGCCGCACTGA-GAGAATAGGGC..........................................................................................................................................................................................................22200.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGATTG...............................26200.051000000000000000000000000001000000000000000000000000000000000000
..............................................GAAGGATGAGAGCAACACCCGT.......................................................................................................................................................................................................................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CCCGGGCCGGGAGCCGCAGG.20200.051000000000010000000000000000000000000000000000000000000000000000
......................................GAGTAAGCGAAGGATGAGAGC................................................................................................................................................................................................................................................................................21200.051000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCAGATGGAACCCGAAGTTATCC......................................................................................................................................23200.051000000000000000000000000000000100000000000000000000000000000000
...................................................ATGAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCGGGGAA.................................24200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CAGCGGGGACACCGAGCCTTTCC....................23200.051001000000000000000000000000000000000000000000000000000000000000
................................................AGGATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................21200.051000000000001000000000000000000000000000000000000000000000000000
.....................................CGAGTAAGCGAAGGATGAGAG.................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
...............................................AAGGATGAGAGCAACACCCGTCGCAT..................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
.................................CCCACGAGTAAGCGAAGGA.......................................................................................................................................................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GACGAAGACAACAGCAGCTC.....................................20200.051000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATC------------------------------------GTCAGACGAAGACAAC.............................................19200.051000000000000000000000000000100000000000000000000000000000000000
.............................................CGAAGGATGAGAGCAACACCCGTC......................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................T------------------------------ATC------------------------------------GTCAGACGAAGACAACAGCAG........................................25200.051000000000000000000000000000000000010000000000000000000000000000
.............................................CGAAGGATGAGAGCAACACCCGTCGCC...................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..................................................GATGAGAGCAACACCCGTCGCCCAA................................................................................................................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
droGri2
TTACTTACATTA------------A-AT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGTTGACTATATATATATAT------------------ACTTTATT------------------------------AGTTGACTATATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GTGATGAAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCCTTGGTTACTATTGTTCTTAGCCACGG------------------------------------------------------------------T--------------------------------------------GACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................GTTACTATTGTTCTTAGCCACGG------------------------------------------------------------------T--------------------------------------------....2411.00101000
..GATGAAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGG........................................................................................................................................................2011.00100100
...........G-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCCTTGG.........................................................................................................................................2621.00201100
..GATGAAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGC.....................................................................................................................................................2311.00101000
...........G-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCC.............................................................................................................................................2220.50100100
...........................................................................................................................................................................CTTTGAGGAGCATTCTGCCTT...........................................................................................................................................2120.50100100
..........AG-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCCTTGG.........................................................................................................................................2720.50101000
..............................................................................................................................................................................TGAGGAGCATTCTGCCTTGG.........................................................................................................................................2020.50100100
...........G-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGCCTTGGT........................................................................................................................................2720.50100100
...........G-------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGAGGAGCATTCTGC..............................................................................................................................................2120.50100100
............................................................................................................................................................................TTTGAGGAGCATTCTGCCTTGGTTA......................................................................................................................................2520.50100100
dp5
TCCTGGAAGCGA------------A-GC---AGA---------------------------------C---------AACGTACCGG----TCGG-----------------GGTA--ACAGATGAGACA-TGCAAAG------------------------------GTGG--------------------------------------------------------------------------------------------------------------G--------------------------------------------TTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................TA--ACAGATGAGACA-TGCAAAG------------------------------GTG................................................................................................................................................................2411.0010100000000
..................................................................................................................TA--ACAGATGAGACA-TGCAAAG------------------------------GTGG--------------------------------------------------------------------------------------------------------------.................................................2511.0010100000000
droPer2
GCCCTGGAACCG------------A-AGCGTAGA-----------------------CGA-------------------CGCTCAAG----GAGG-----------------GGCA--ACGGGCAAGGCA-TATG---------------G-----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------GAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................CGCTCAAG----GAGG-----------------GGCA--ACGGGC...............................................................................................................................................................................................................2211.001010000
droAna3
CCGCAGGCGTAG------------G-GC--A-GG------A--------------GAAAA------AG---------GAGA----AT----GTAC-----------------AATC--ACCAATAACGCA----------------ACAAT-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------AGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AATATCAAAAAATACCAAAATTTA-------------------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------ACA---AAAAATTACTAAAATTAACAAATAAACACAACAAAATACCAAAAA------------------AC--------------------------------------------TCTASizeHit CountTotal NormTotal
No Reads
droKik1
ACGGCCAGAGCG----ACGACCCA----------------G------------------C------ACAGACGAATGGACGCACCAG----GCAG-----------------GGTG--ATGACCACGA----------------------C-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------ACGASizeHit CountTotal NormTotal
No Reads
droFic1
TGACGCAGACGT------------C-CC--C-GA------A------------------C------ACCGCCTAACA-------------GTCTC-----------------G-----ATCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------GCAGSizeHit CountTotal NormTotal
No Reads
droEle1
GTTATGCTAAAA------------A-T-----AA---------------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATATTTAAACATTTTTAAATTTCTAAAAAT--------------------------------------------TTTASizeHit CountTotal NormTotal
No Reads
droRho1
CCCTTGACGCGA------------G-CG--ACGA---------------------CGACA------TC---------A-----CCGG----GCCA-----------------AGCA-ACCCGGCGCGGTC-TGGAACT------AC------------------GAAATAA-CTTTAAG------------------------------------------------------------------------------------------------------AT--------------------------------------------CCATSizeHit CountTotal NormTotal
No Reads
droBia1
ACTACTATTTCG------------A-GG--ATGG---------------------GGAGA------AG---------AACC----AGGACGGGCC-----------------A-----GTCAGCACGGAG-------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAGAG------------------------------TGATCTCAAGGASizeHit CountTotal NormTotal
No Reads
droTak1
TCCCGAGGCCGG------------T-AC--C-GG------T--------------CGAAC------AG---------GACAGC----CCAGACGC-----------------A-----GCGAAGAC-----------G------AC------------------AGAGCAG-GTTTA----------GGGTCGGGTGACCCTAAACTCCAATACAGAA----------------------------------------------------------------A--------------------------------------------GCCCSizeHit CountTotal NormTotal
No Reads
droEug1
AGCCAGAAACCC----AGAATCTGGTAC--C-CG------G--------------AAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------AG------------------------------GACGSizeHit CountTotal NormTotal
No Reads
droSim2
CGAGAAAGAGGA------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------GGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
ACACTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGGCACAAACTTCACCAACGACGA------------------------------CACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATACGCAAGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAATTCATCGAAGATAGAAGCACCGACG---------------------------------ACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................TCGAAGATAGAAGCACCGACG---------------------------------..2120.50100010000000
................................................................................................................................................................................................................................................................................TCATCGAAGATAGAAGCACCGA.....................................2220.50101000000000
droEre2
GCCAAAGAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 12:24 AM