ID:

dmo_136

 Coordinate:

scaffold_6473:16914103-16914158 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.2 -13.1 -13.1

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dmo_136  scaffold_6473:16914133-16914157 +
  2. scaffold_6623:2221-2245 +
star

Sense Strand Reads

GCAATTTCAACTACAGCGCTACCTCTGCCTGTCATTGATGTGCCCACCAGATGGAGATCAAGTTTTGAAATGCTAAGAAATGTATGCATATATGAGGAGTTCATCCGGCAAAGCGAACAACTTTTTATTGGGGACTTCTACAAGCTTTTCTTGGAA
***********************************.....((((.....((((((..(((.((..((..((((........)))).)).)).)))....)))))).))))..........************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
..................................................................................................................................GGGACTTCTACAAGCTTTTCTTGG.. 24 0 1 55.00 55 54 1 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTTCTTGGA. 25 0 1 45.00 45 30 15 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTTCTTG... 23 0 1 26.00 26 18 8 0 0
................................................................................TGTATGCATATATGAGGAGTTCATC................................................... 25 0 2 21.00 42 18 8 11 5
...................................................................................................................................GGACTTCTACAAGCTTTTCTTGG.. 23 0 1 10.00 10 10 0 0 0
............................CTGTCATTGATGTGCCCACCAGA......................................................................................................... 23 0 3 9.33 28 27 1 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCC.................................................. 26 0 2 8.50 17 15 0 1 1
................................................................................TGTATGCATATATGAGGAGTTCAT.................................................... 24 0 2 8.00 16 16 0 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCCGG................................................ 28 0 2 6.50 13 12 0 1 0
................................................................................TGTATGCATATATGAGGAGTTCA..................................................... 23 0 2 6.00 12 12 0 0 0
..................................................................................................................................GTGACTTCTACAAGCTTTTCTTGGA. 25 1 1 5.00 5 0 5 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCCG................................................. 27 0 2 4.50 9 9 0 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTTCTTGGAA 26 0 1 4.00 4 4 0 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTTCT..... 21 0 1 4.00 4 0 4 0 0
.............................................ACCAGATGGAGATCAAGTTTTGA........................................................................................ 23 0 1 3.00 3 2 0 0 1
...................................................................................................................................GGACTTCTACAAGCTTTTCTTG... 22 0 1 3.00 3 3 0 0 0
............................CTGTCATTGATGTGCCCACCAG.......................................................................................................... 22 0 3 2.67 8 8 0 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCCGGC............................................... 29 0 2 2.50 5 3 1 1 0
................................................................................TGTATGCATATATGAGGAGTTC...................................................... 22 0 2 2.00 4 0 3 1 0
..................................................................................................................................GGGACTTCTACAAGCCTTTCTTGG.. 24 1 1 2.00 2 2 0 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTTCTT.... 22 0 1 2.00 2 2 0 0 0
............................CTGTCATTGATGTGCCCACCAGATGG...................................................................................................... 26 0 3 1.67 5 5 0 0 0
............................CTGTCATTGATGTGCCCACCAGATGGA..................................................................................................... 27 0 3 1.67 5 5 0 0 0
.................................................................................GTATGCATATATGAGGAGTTCATC................................................... 24 0 2 1.50 3 3 0 0 0
............................CTGTCATTGATGTGCCCACCAGATG....................................................................................................... 25 0 3 1.33 4 3 1 0 0
.....TTCAACTACAGCGCTACCTCTGCCTG............................................................................................................................. 26 0 3 1.33 4 4 0 0 0
..................................................................................................................................GTGACTTCTACAAGCTTTTCTTGG.. 24 1 1 1.00 1 1 0 0 0
................................................................................................................GCGAACAACTTTTTATTGGGGACTTC.................. 26 0 1 1.00 1 0 0 0 1
................................................................................TTTATGCATATATGAGGAGTTCATCC.................................................. 26 1 2 1.00 2 0 2 0 0
..................................................................................................................................GCGACTTCTACAAGCTTTTCT..... 21 1 1 1.00 1 0 1 0 0
.......................................GTGCCCACCAGATGGAGATCAAGTTT........................................................................................... 26 0 1 1.00 1 1 0 0 0
.............................................................................................................................CAGAGGGGACTTCTACAAGCTTTTCTTGG.. 29 3 1 1.00 1 1 0 0 0
................................................................................................................................TGGGGACTTCTACAAGCTTTTCTTG... 25 0 1 1.00 1 1 0 0 0
..................................................................................................................................GGGACTTCTACGAGCTTTTCTTGGAA 26 1 1 1.00 1 1 0 0 0
.................................................................................GTATGCATATATGAGGAGTTCATCC.................................................. 25 0 2 1.00 2 2 0 0 0
................................................................................TGCATGCATATATGAGGAGTTCAT.................................................... 24 1 2 1.00 2 0 2 0 0
............................CTGTCATTGATGTGCCCACCAGATGGAG.................................................................................................... 28 0 3 1.00 3 3 0 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCCGA................................................ 28 1 2 1.00 2 2 0 0 0
..............................................................................AATGTATGCATATATGAGGAGTTCA..................................................... 25 0 2 1.00 2 2 0 0 0
................................................................................TGTATGCATATATGAGGAGTT....................................................... 21 0 2 1.00 2 2 0 0 0
................................................................................................................................TGGGGACTTCTACAAGCTTTTCTTGGAA 28 0 1 1.00 1 1 0 0 0
..............................................................................................................AAGCGAACAACTTTTTATTG.......................... 20 0 1 1.00 1 1 0 0 0
..................................................................................................................................GGGTCTTCTACAAGCTTTTCTTG... 23 1 1 1.00 1 0 1 0 0
....................................................................................................................................GACTTCTACAAGCTTTTCTTGG.. 22 0 1 1.00 1 1 0 0 0
...................................................................................................................................GGACTTCTACAAGCTTTTCTTGGAA 25 0 1 1.00 1 1 0 0 0
..............................................................................AATGTATGCATATATGAGGAGTTCAT.................................................... 26 0 2 1.00 2 2 0 0 0
.......................................................................................................................AGTTTTTATTGGGGACTTCC................. 20 2 1 1.00 1 0 1 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTCTTGG... 23 3 1 1.00 1 1 0 0 0
...................................................................................................................................GGACTTCTACAAGCTTTTCTTGGA. 24 0 1 1.00 1 1 0 0 0
..................................................ATGGAGATCAAGTTTTGAAATGC................................................................................... 23 0 1 1.00 1 0 0 1 0
....TTTCAACTACAGCGCTACCTCTGCC............................................................................................................................... 25 0 3 1.00 3 2 1 0 0
............................CTGTCATTGATGTGCCCACCA........................................................................................................... 21 0 3 1.00 3 3 0 0 0
..................................................................................................................................GGCACTTCTACAAGCTTTTCTTG... 23 1 1 1.00 1 0 1 0 0
..................................................................................................................................GGGACTTCTACAAGCCTTTCTTG... 23 1 1 1.00 1 0 1 0 0
.................................................................................................................................TGGGACTTCTACAAGCTTTTCTTG... 24 1 1 1.00 1 1 0 0 0
...ATTTCAACTACAGCGCTACCTCTGC................................................................................................................................ 25 0 3 1.00 3 1 1 0 1
..................................................................................................................................GGGTCTTCTACAAGCTTTTCT..... 21 1 1 1.00 1 0 1 0 0
............................CTGTCATTGATGTGCCCACC............................................................................................................ 20 0 3 0.67 2 1 1 0 0
...AGTTCAACTACAGCGCTACCTCTGC................................................................................................................................ 25 1 3 0.67 2 0 2 0 0
................................................................................TGTATGCATATATGAGGAGTTAATCC.................................................. 26 1 2 0.50 1 1 0 0 0
................................................................................TGTATGCATATATGAGGAGTTCATCCGT................................................ 28 1 2 0.50 1 1 0 0 0
..............................................................................AATGTATGCATATATGAGGAGTTC...................................................... 24 0 2 0.50 1 1 0 0 0
................................................................................AGTATGCATATATGAGGAGTTAAT.................................................... 24 2 2 0.50 1 1 0 0 0
................................................................................TGTATTCATATATGAGGAGTTCAT.................................................... 24 1 2 0.50 1 1 0 0 0
......................................................................................CATATATGAGGAGTTCATCCGG................................................ 22 0 2 0.50 1 0 1 0 0
................................................................................TTCATGCATATATGAGGAGTTCATCC.................................................. 26 2 2 0.50 1 0 1 0 0
...................................................................................ATGCATATATGAGGAGTTCATCCGGC............................................... 26 0 2 0.50 1 1 0 0 0
..............................................................................AATGTATGCATATATGAGGAGT........................................................ 22 0 2 0.50 1 1 0 0 0
................................................................................TGTATGCATATATGAGGA.......................................................... 18 0 2 0.50 1 1 0 0 0
................................................................................TTTATGCATATATGAGGAGTTCATC................................................... 25 1 2 0.50 1 0 1 0 0
................................................................................TGTATGCATATATGAGGAGTTCATAT.................................................. 26 2 2 0.50 1 1 0 0 0
..............................................................................AATGTATGCATATATGAGGAGTT....................................................... 23 0 2 0.50 1 0 1 0 0
...............................................................................CTGTATGCATATATGAGGAGTTCATC................................................... 26 1 2 0.50 1 0 0 0 1
...............................................................................CTGTATGCATATATGAGGAGTTCA..................................................... 24 1 2 0.50 1 1 0 0 0
................................................................................TGTATGCATATATGAGGAGTTCATG................................................... 25 1 2 0.50 1 0 1 0 0
................................................................................TTTTTGCATATATGAGGAGTTCATCC.................................................. 26 2 2 0.50 1 0 1 0 0
.................................................................................GTATGCATATATGAGGAGTTCATCCGGC............................................... 28 0 2 0.50 1 1 0 0 0
..................................................................................TATGCATATATGAGGAGTTC...................................................... 20 0 2 0.50 1 1 0 0 0
......................................................................................CATATATGAGGAGTTCATCC.................................................. 20 0 2 0.50 1 0 1 0 0
.................................................................................GTATGCATATATGAGGAGTTCATCCG................................................. 26 0 2 0.50 1 1 0 0 0
...............................................................................ATGTATGCATATATGAGGAGTTCA..................................................... 24 0 2 0.50 1 1 0 0 0
..................................................................................................................................GGGACTTCTACAAGCTTTACTTGGA. 25 1 2 0.50 1 1 0 0 0
.................................................................................GTATGCATATATGAGGAGTTCATCCGG................................................ 27 0 2 0.50 1 1 0 0 0
...............................................................................ATGTATGCATATATGAGGAGTTC...................................................... 23 0 2 0.50 1 1 0 0 0
...............................................................................ATGTATGCATATATGAGGAGTTCATC................................................... 26 0 2 0.50 1 1 0 0 0
.............................TGTCATTGATGTGCCCACCAGATG....................................................................................................... 24 0 3 0.33 1 1 0 0 0
...ATTTCAACTACAGCGCTACCTCTGCCAAA............................................................................................................................ 29 3 3 0.33 1 1 0 0 0
.....TTCAACTACAGCGCTACCTCTGCCT.............................................................................................................................. 25 0 3 0.33 1 1 0 0 0
............................CTGTCATTGATGTGCCCAC............................................................................................................. 19 0 3 0.33 1 1 0 0 0
......TCAACTACAGCGCTACCTCTGC................................................................................................................................ 22 0 3 0.33 1 1 0 0 0
....TTTTAACTACAGCGCTACCTCTGCC............................................................................................................................... 25 1 3 0.33 1 0 1 0 0
...ATTTCAACTACAGCGCTACCTCTGCCT.............................................................................................................................. 27 0 3 0.33 1 0 1 0 0
........AACTACAGCGCTACCTCTGCCTG............................................................................................................................. 23 0 3 0.33 1 1 0 0 0
.............................TGTCATTGATGTGCCCACCAGATGGAG.................................................................................................... 27 0 3 0.33 1 1 0 0 0
...ATTTCAACTACAGCGCTACCTCTGCC............................................................................................................................... 26 0 3 0.33 1 1 0 0 0
..................CTACCTCTGCCTGTCATTGATGTGC................................................................................................................. 25 0 3 0.33 1 0 0 0 1
........AACTACAGAGCTACCTCTGCCT.............................................................................................................................. 22 1 3 0.33 1 0 1 0 0
........................CTGCCTGTCATTGATGTGCCCACC............................................................................................................ 24 0 3 0.33 1 1 0 0 0
...ATTTCAACTACAGCGCTACCTC................................................................................................................................... 22 0 3 0.33 1 0 1 0 0
....TTTCAACTACAGCGCTACCTC................................................................................................................................... 21 0 3 0.33 1 1 0 0 0
....TTTCAACTACAGCGCTACCTCTGCCT.............................................................................................................................. 26 0 3 0.33 1 0 1 0 0
...ATTTCAACTACGGCGCTACCTC................................................................................................................................... 22 1 3 0.33 1 1 0 0 0
....TTTCAACTACAGCGCTACCTCTGCG............................................................................................................................... 25 1 3 0.33 1 1 0 0 0
...ATTTCAACTACAGCGCTACCTCTGAC............................................................................................................................... 26 1 3 0.33 1 0 1 0 0
...TTTTCAACTACAGCGCTACCT.................................................................................................................................... 21 1 3 0.33 1 0 1 0 0
............................CTGTCATTGATGTGCCCACCAGATGGT..................................................................................................... 27 1 3 0.33 1 1 0 0 0
GCAATTTCAACTACAGCGCTACCTCTGC................................................................................................................................ 28 0 3 0.33 1 1 0 0 0
....................ACCTCTGCCTGTCATTGATGTGCCCAC............................................................................................................. 27 0 3 0.33 1 1 0 0 0
....TTTCAACTACAGCGCTACCTCTGC................................................................................................................................ 24 0 3 0.33 1 1 0 0 0
.......CAACTACAGCGCTACCTCTGCCTGT............................................................................................................................ 25 0 3 0.33 1 0 1 0 0
............................CTGTCATTGATGTGCCCACCAGAT........................................................................................................ 24 0 3 0.33 1 1 0 0 0
.............................TGTCATTGATGTGCCCACCAG.......................................................................................................... 21 0 3 0.33 1 1 0 0 0
.........ACTACAGCGCTACCTCTGCCT.............................................................................................................................. 21 0 3 0.33 1 0 1 0 0
............................CTGTCATTGATGTGCCCACCAGATT....................................................................................................... 25 1 4 0.25 1 1 0 0 0
.................................................GATGGTGACCAAGTTTTG......................................................................................... 18 2 5 0.20 1 1 0 0 0
........................................................ATCAAGTTTTTGAAAGCTAAG............................................................................... 21 3 10 0.10 1 1 0 0 0
.................................................GATGAAGATCCAGTTTGG......................................................................................... 18 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

CGTTAAAGTTGATGTCGCGATGGAGACGGACAGTAACTACACGGGTGGTCTACCTCTAGTTCAAAACTTTACGATTCTTTACATACGTATATACTCCTCAAGTAGGCCGTTTCGCTTGTTGAAAAATAACCCCTGAAGATGTTCGAAAAGAACCTT
************************************.....((((.....((((((..(((.((..((..((((........)))).)).)).)))....)))))).))))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
 V056
head
................................................................................................................CGCTTGTTGAAAAATAACCCCTGAAGAT................ 28 0 1 157.00 157 115 41 0 1 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGAAGAT................ 25 0 1 133.00 133 106 25 0 2 0 0
.............................................................CAAAACTTTACGATTCTTTACATACGTAT.................................................................. 29 0 1 97.00 97 68 29 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAGAT................ 24 0 1 54.00 54 27 27 0 0 0 0
..............TCGCGATGGAGACGGACAGTAACT...................................................................................................................... 24 0 3 48.67 146 69 61 2 13 0 1
.............GTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 25 0 3 46.00 138 118 11 1 8 0 0
...............CGCGATGGAGACGGACAGTAACT...................................................................................................................... 23 0 3 42.67 128 61 51 6 10 0 0
.................................................................................................................GCTTGTTGAAAAATAACCCCTGAAGAT................ 27 0 1 35.00 35 34 1 0 0 0 0
..................................................................................................................CTTGTTGAAAAATAACCCCTGAAGAT................ 26 0 1 31.00 31 17 12 1 1 0 0
......................................ACACGGGTGGTCTACCTCTAGTT............................................................................................... 23 0 1 26.00 26 24 1 0 1 0 0
................................................................AACTTTACGATTCTTTACATACGTAT.................................................................. 26 0 2 24.50 49 49 0 0 0 0 0
...............................................................................................................TCGCTTGTTGAAAAATAACCCCTGAAGAT................ 29 0 1 23.00 23 11 12 0 0 0 0
.................................................................ACTTTACGATTCTTTACATACGTAT.................................................................. 25 0 2 21.00 42 34 8 0 0 0 0
...............................................................AAACTTTACGATTCTTTACATACGTAT.................................................................. 27 0 2 21.00 42 40 2 0 0 0 0
.................CGATGGAGACGGACAGTAACT...................................................................................................................... 21 0 3 17.67 53 16 22 14 1 0 0
.............................................................CAAAACTTTACGATTCTTTACATACGTA................................................................... 28 0 1 13.00 13 13 0 0 0 0 0
................GCGATGGAGACGGACAGTAACT...................................................................................................................... 22 0 3 13.00 39 31 4 2 1 1 0
............TGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 26 0 3 12.00 36 18 5 10 3 0 0
..................................................................CTTTACGATTCTTTACATACGTAT.................................................................. 24 0 2 11.50 23 22 1 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGAAGA................. 24 0 1 11.00 11 11 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCTGAAGA................. 27 0 1 11.00 11 11 0 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATACGT.................................................................... 27 0 1 10.00 10 2 8 0 0 0 0
.................................TAACTACACGGGTGGTCTACCTCTAGTT............................................................................................... 28 0 1 8.00 8 6 2 0 0 0 0
...................................ACTACACGGGTGGTCTACCTCTAGTT............................................................................................... 26 0 1 8.00 8 8 0 0 0 0 0
....................................CTACACGGGTGGTCTACCTCTAGTT............................................................................................... 25 0 1 7.00 7 6 1 0 0 0 0
.....................................................................................................................GTTGAAAAATAACCCCTGAAGAT................ 23 0 1 7.00 7 6 1 0 0 0 0
..............................................................AAAACTTTACGATTCTTTACATACGTAT.................................................................. 28 0 2 6.50 13 12 1 0 0 0 0
.....................................................................TACGATTCTTTACATACGTAT.................................................................. 21 0 2 6.50 13 11 2 0 0 0 0
..............CCGCGATGGAGACGGACAGTAACT...................................................................................................................... 24 1 3 5.33 16 0 16 0 0 0 0
...........ATGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 27 0 3 4.67 14 8 5 1 0 0 0
..................................AACTACACGGGTGGTCTACCTCTAGTT............................................................................................... 27 0 1 4.00 4 2 2 0 0 0 0
..........GATGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 28 0 3 4.00 12 10 1 0 1 0 0
.............GTCGCGATGGAGACGGACAGTAAC....................................................................................................................... 24 0 3 4.00 12 12 0 0 0 0 0
............................................................TCAAAACTTTACGATTCTTTACATACGT.................................................................... 28 0 1 4.00 4 3 1 0 0 0 0
.......................................CACGGGTGGTCTACCTCTAGTT............................................................................................... 22 0 1 4.00 4 3 1 0 0 0 0
..........................................................................................ATACTCCTCAAGTAGGCCGTTT............................................ 22 0 1 4.00 4 4 0 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAGA................. 23 0 1 3.00 3 3 0 0 0 0 0
.............................ACAGTAACTACACGGGTGGTCTACCT..................................................................................................... 26 0 3 3.00 9 9 0 0 0 0 0
....................................................................................................................CGTTGAAAAATAACCCCTGAAGAT................ 24 1 1 3.00 3 0 3 0 0 0 0
..............................CAGTAACTACACGGGTGGTCTACCTCT................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATACTT.................................................................... 27 1 1 3.00 3 0 3 0 0 0 0
................................GTAACTACACGGGTGGTCTACCT..................................................................................................... 23 0 3 2.67 8 8 0 0 0 0 0
...............GGGGATGGAGACGGACAGTAACT...................................................................................................................... 23 2 3 2.67 8 0 0 8 0 0 0
..............................................................CAAACTTTACGATTCTTTACATACGTAT.................................................................. 28 1 2 2.50 5 1 4 0 0 0 0
................................................................AACTTTACGATTCTTTACATACGTA................................................................... 25 0 2 2.50 5 5 0 0 0 0 0
...............CGGGATGGAGACGGACAGTAACT...................................................................................................................... 23 1 3 2.33 7 0 0 7 0 0 0
..............TCGCGATGGAGACGGACAGTAAGT...................................................................................................................... 24 1 3 2.33 7 0 7 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAACAT................ 24 1 1 2.00 2 0 2 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTA........................................................................... 20 0 1 2.00 2 1 1 0 0 0 0
...................................................................................................................CTGTTGAAAAATAACCCCTGAAGAT................ 25 1 1 2.00 2 0 2 0 0 0 0
.....................................................................................CGTATATACTCCTCAAGTAGGCCGTTT............................................ 27 0 1 2.00 2 2 0 0 0 0 0
.................................TAACTACACGGGTGGTCTACCTCTAGT................................................................................................ 27 0 1 2.00 2 1 1 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATACTTAT.................................................................. 29 1 1 2.00 2 1 1 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGAAG.................. 23 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAGATC............... 25 1 1 2.00 2 1 1 0 0 0 0
..................................................................................................................CTTGTTGAAAAATAACCCCTGAAGGT................ 26 1 1 2.00 2 0 2 0 0 0 0
...............................................................................................................CCGCTTGTTGAAAAATAACCCCTGAAGAT................ 29 1 1 2.00 2 0 2 0 0 0 0
......................................ACACGGGTGGTCTACCTCTAGT................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCTGATGAT................ 28 1 1 2.00 2 0 2 0 0 0 0
.......................................CACGGGTGGTCTACCTCTAGT................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0
.................................................................................................................GCTTGTTGAAAAATAACCCCTGAAGA................. 26 0 1 2.00 2 2 0 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGAACAT................ 25 1 1 2.00 2 0 2 0 0 0 0
................................................................................................................CGCGTGTTGAAAAATAACCCCTGAAGAT................ 28 1 1 2.00 2 0 2 0 0 0 0
.....................................................................................................................GTTGAAAAATAACCCCTGAAGATGTT............. 26 0 1 2.00 2 1 1 0 0 0 0
.................................................................ACTTTACGATTCTTTACATACGTA................................................................... 24 0 2 2.00 4 4 0 0 0 0 0
................GCGATGGAGACGGACAGTAAC....................................................................................................................... 21 0 3 1.67 5 5 0 0 0 0 0
....................................................................TTACGATTCTTTACATACGTAT.................................................................. 22 0 2 1.50 3 1 2 0 0 0 0
..............................................................AAAACTTTACGATTCTTTACATACGTA................................................................... 27 0 2 1.50 3 3 0 0 0 0 0
...................................................................TTTACGATTCTTTACATACGTAT.................................................................. 23 0 2 1.50 3 3 0 0 0 0 0
...............................................................AAACTTTACGATTCTTTACATACGT.................................................................... 25 0 2 1.50 3 3 0 0 0 0 0
...............CGCGATGGAGACGGACAGTAACTA..................................................................................................................... 24 0 3 1.33 4 3 0 0 1 0 0
...........................GGACAGTAACTACACGGGTGGTCTACCT..................................................................................................... 28 0 3 1.33 4 4 0 0 0 0 0
...............CGCGATGGAGACGGACAGTAAC....................................................................................................................... 22 0 3 1.33 4 4 0 0 0 0 0
........................................AAGGGTGGTCTACCTCTAGTT............................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
............................................................................................ACTCCTCAAGTAGGCCGTTT............................................ 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................GTTGTTGAAAAATAACCCCTGAAGAT................ 26 1 1 1.00 1 1 0 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATACATAT.................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................CTCCTCAAGTAGGCCGTTT............................................ 19 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................CCGCTTGTTGAAAAATAACC......................... 20 1 1 1.00 1 0 1 0 0 0 0
.................CGATGGAGACGGACAGTAAC....................................................................................................................... 20 0 3 1.00 3 2 1 0 0 0 0
...............CGCGATGGAGACGGACAGTAACTC..................................................................................................................... 24 1 3 1.00 3 0 3 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCTGAAGGT................ 28 1 1 1.00 1 0 1 0 0 0 0
........................................ACGGGTGGTCTACCTCTAGTT............................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................CTAGTTCAAAACTTTACGACAATTT............................................................................ 25 3 1 1.00 1 0 1 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCTGTAGAT................ 28 1 1 1.00 1 0 1 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACAT........................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................GCTTGTTGAAAAATAACCCCTAAAGAT................ 27 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................GTGGAAAAATAACCCCTGAAGAT................ 23 1 1 1.00 1 0 1 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACACACGTAT.................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................CCTCAAGTAGGCCGTTTCGCT........................................ 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................TTGTTGAAAACTAACCCCTGAAGAT................ 25 1 1 1.00 1 0 1 0 0 0 0
.............................ACAGTAACTACACGGGTGGTCTACCTCT................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.......................................CACGGGTGGTCTACCTCTAGTTCA............................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
................................CTAACTACACGGGTGGTCTACCTCTAGT................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAACTAACCCCTGAAGAT................ 28 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................................CTTGTTGAAAAATAACCCCTGAAGA................. 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATA....................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
......................................ACACGGGTGGTCTACCACTAGTT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCTCTGAAGAT................ 28 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCTCTG..................... 20 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGATGAT................ 25 1 1 1.00 1 0 1 0 0 0 0
.........TGATGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 29 0 3 1.00 3 0 2 0 1 0 0
............................................................TCAAAACTTTACGATTCTTTACATACGTA................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
.................CGATGGAGACGGACAGTAACTAC.................................................................................................................... 23 0 3 1.00 3 3 0 0 0 0 0
....................................................................................................................TGTGGAAAAATCACCCCTGAAGAT................ 24 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................................CCGCTTGTTGAAAAATAACCCCTGAACAT................ 29 2 1 1.00 1 0 1 0 0 0 0
....................................CTACACGGGTGGTCTACCTCTAGT................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................GCGCTTGTTGAAAAATAACCCCTGAAGAT................ 29 1 1 1.00 1 1 0 0 0 0 0
.............................................................CAAAACTTTACGATTCTTTACATACTTA................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
..................................AACTACACGGGTGGTCTACCTCTACTT............................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
............................................................TCAAAACTTTACGATTCTTTACATACTT.................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAGATGT.............. 26 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................TCGCTTGTTGAAAAATGACCCCTGAAGA................. 28 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCAGAAGAT................ 28 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAGGT................ 24 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................TCGCTTGTTGAAAAATAACCCCTGAAG.................. 27 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCCTGAACAT................ 28 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................TTGTTGAAAAATAACCCCTGAAGGT................ 25 1 1 1.00 1 0 1 0 0 0 0
...........................................GGTGGTCTACCTCTAGTT............................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................TCGCTTGTTGAAAAATAACCCCTCAAGAT................ 29 1 1 1.00 1 0 1 0 0 0 0
......................................ACACGGGTGGTCTACCTCTAGTTCA............................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................CTCTTGTTGAAAAATAACCCCTGAAGAT................ 28 1 1 1.00 1 0 1 0 0 0 0
.........................................CGGGTGGTCTACCTCTAGTTCAAAAC......................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAACCCTTGA.................... 24 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................TCGCTTCTTGAAAAATAACCCCTGAAGAT................ 29 1 1 1.00 1 0 1 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAGCCCCTGAAGAT................ 28 1 1 1.00 1 1 0 0 0 0 0
.............TTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 25 1 3 1.00 3 1 1 0 1 0 0
.........................................CGGGTGGTCTACCTCTAGTT............................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................GAAAAATAACCCCTGAAGAT................ 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................CCGCTTGTTGAAAAATAACCCCTGGAGAT................ 29 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................ATACTCCTCAAGTAGGCCGTT............................................. 21 0 2 1.00 2 2 0 0 0 0 0
..................................................................................................................CTTGTTGAAAAATAACCCCCGAAGAT................ 26 1 1 1.00 1 1 0 0 0 0 0
........................................ACGGGTGGTCTACCTCTAGTTCAAAACT........................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
..................................AACTACACGGGTGGTCTACCTCTATT................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
....................................................................................ACGTATATACTCCTCAAGTAGGCCGTTT............................................ 28 0 1 1.00 1 1 0 0 0 0 0
..................................................TACCTCTAGTTCAAAACTTTACGATT................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
............................................................................................CCTCCTCAAGTAGGCCGTTT............................................ 20 1 1 1.00 1 0 0 0 1 0 0
............AGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 26 1 3 1.00 3 3 0 0 0 0 0
....................................................................................................................TGTTGAAAAATAACCCCTGAAG.................. 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................CTAGTTCAAAACTTTACGATTCTTT............................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................CGCTTGTTGAAAAATAAACCCTGAAGAT................ 28 1 1 1.00 1 0 1 0 0 0 0
....................TGGAGACGGACAGTAACT...................................................................................................................... 18 0 3 0.67 2 2 0 0 0 0 0
...........ATGTCGCGATGGAGACGGACAGTAAC....................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0
...................ATGGAGACGGACAGTAACT...................................................................................................................... 19 0 3 0.67 2 2 0 0 0 0 0
.................CGATGGAGACGGACAGTAACTA..................................................................................................................... 22 0 3 0.67 2 0 1 1 0 0 0
.............................ACAGTAACTACACGGGTGGTCTACCTC.................................................................................................... 27 0 3 0.67 2 2 0 0 0 0 0
............TTTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 26 1 3 0.67 2 1 0 1 0 0 0
......................GAGACGGACAGTAACTACACGGGTGGT........................................................................................................... 27 0 3 0.67 2 0 0 0 1 1 0
..................GATGGAGACGGACAGTAACT...................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0
.....................GGAGACGGACAGTAACTACACGGGTGGT........................................................................................................... 28 0 3 0.67 2 2 0 0 0 0 0
.............ATCGCGATGGAGACGGACAGTAACT...................................................................................................................... 25 1 3 0.67 2 2 0 0 0 0 0
....................................................................TTACGATTCTTTACATACGTATAT................................................................ 24 0 2 0.50 1 1 0 0 0 0 0
......................................................................ACGATTCTTTACATACGTA................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
.......................................................................CGATTCTTTACATACGTAT.................................................................. 19 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................CTTATATACTCCTCAAGTAGGCCGT.............................................. 25 1 2 0.50 1 0 1 0 0 0 0
..................................TACTACACGGGTGGTCTACCTCTAGTT............................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
................................................................AACTTTACGATTCTTTACATACG..................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
....................................................................CTACGATTCTTTACATACGTAT.................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
.................................................................ACTTTACGATTCTTTACATACGTATAT................................................................ 27 0 2 0.50 1 1 0 0 0 0 0
...............................................................AAACTTTACGATTCTTTACCTACGTAT.................................................................. 27 1 2 0.50 1 0 1 0 0 0 0
..........................................................................................ATACTCCTCAAGTAGGCCGT.............................................. 20 0 2 0.50 1 1 0 0 0 0 0
..............................................................TTAACTTTACGATTCTTTACATACGTAT.................................................................. 28 2 2 0.50 1 1 0 0 0 0 0
.............................................................TCAGACTTTACGATTCTTTACATACGTA................................................................... 28 3 2 0.50 1 1 0 0 0 0 0
...............................................................AAACTTTACGATTCTTTACATACGTA................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
....................................................................TTACGATTCTTTACATACGTATATACT............................................................. 27 0 2 0.50 1 1 0 0 0 0 0
......................................................................ACGATTCTTTACATACGTAT.................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
................................................................AACTTTACGATTCTTTACATACGTATC................................................................. 27 1 2 0.50 1 1 0 0 0 0 0
......................................................................ACGATTCTTTACATACGTATATACTCC........................................................... 27 0 2 0.50 1 1 0 0 0 0 0
......................................................................ACGATTCTTTACATACGTATATACTC............................................................ 26 0 2 0.50 1 1 0 0 0 0 0
...................................................................TTTACGATTCTTTACATACGT.................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
.......................................................................CGATTCTTTACATACGTAGA................................................................. 20 1 2 0.50 1 0 1 0 0 0 0
.............................................................TCAAACTTTACGATTCTTTACATACGTAT.................................................................. 29 2 2 0.50 1 1 0 0 0 0 0
.....................................................................CACGATTCTTTACATACGTAT.................................................................. 21 1 2 0.50 1 0 1 0 0 0 0
................................................................AACTTTACGATTCTTTACATACGT.................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
...............................................................CCGCTTTACGATTCTTTACATACGTAT.................................................................. 27 3 2 0.50 1 0 1 0 0 0 0
...............................................................AAACTTTACGATTCTTTACATA....................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
................................................................AACTTTACGATTCTTTACATAC...................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
.................CGATGGAGACGGACAGTAA........................................................................................................................ 19 0 3 0.33 1 0 1 0 0 0 0
.................CGAGGGAGACGGACAGTAACT...................................................................................................................... 21 1 3 0.33 1 0 0 1 0 0 0
..............CCGGGATGGAGACGGACAGTAACT...................................................................................................................... 24 2 3 0.33 1 0 0 1 0 0 0
...............GGCGCTGGAGACGGACAGTAACT...................................................................................................................... 23 2 3 0.33 1 0 0 1 0 0 0
...............................AGTAACTACACGGGTGGTCTACCT..................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
..............TCGCGATGGAGACGGACA............................................................................................................................ 18 0 3 0.33 1 0 1 0 0 0 0
..............CCGCGATGGAGACGGGCAGTAACTA..................................................................................................................... 25 2 3 0.33 1 0 0 1 0 0 0
..............TCGCGATGGAGACGGACAGTAACTA..................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0
.........TGATGTCGCGATGGAGACGGACAGT.......................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
...........................GGACAGTAACTACACGGGTGGTCT......................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
..............TCGCGATGGCGACGGACAGTAACT...................................................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0
.............GTCGCGATGGAGACGGACAGTAA........................................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0
...............CGCGATGGAGACGGACAGTAACTCT.................................................................................................................... 25 2 3 0.33 1 0 1 0 0 0 0
.........................ACGGACAGTAACTACACGGGTGGTCT......................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
...........CTGTCGCGATGGAGACGGACAGTAAC....................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGATGGAGACGGAAAGTAACT...................................................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0
...............CGCGATGGTGACGGACAGTAACT...................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
...............CGCGATGGAGACGGACAGTAA........................................................................................................................ 21 0 3 0.33 1 0 1 0 0 0 0
...............CGCGATAGAGACGGACAGTAACT...................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
...............CGCGATGGAGACGTACAGTAACT...................................................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0
..............TCGCGCTGGAGACGGACAGTAACT...................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
..............TCGCGATGGAGAGGGACAGTAACT...................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
...............CGCGATGGAGACTGACAGTAA........................................................................................................................ 21 1 3 0.33 1 1 0 0 0 0 0
...............CGCGATGGAGACGGACAGTA......................................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0
.................AGATGGAGACGGACAGTAACT...................................................................................................................... 21 1 3 0.33 1 0 0 1 0 0 0
...............CGCGATGGAGACGGACAGTAACTAC.................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
.............GTCGCGATGGAGGCGGACAGTAAC....................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
.............GTCGCGATGGAGACGGACAGTAACTG..................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0
...............CACGATGGAGACGGACAGTAACT...................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGACGGAGACGGACAGTAACT...................................................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0
..........TATGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0 0
............CGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0
..............CCGCGATGGAGACGGACAGTAATT...................................................................................................................... 24 2 3 0.33 1 0 1 0 0 0 0
....................TGGAGACGGACAGTAACTACACGG................................................................................................................ 24 0 3 0.33 1 0 0 0 1 0 0
.............CTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 25 1 3 0.33 1 0 0 0 1 0 0
..............CGGCGATGGAGACGGACAGTAACT...................................................................................................................... 24 2 3 0.33 1 0 0 1 0 0 0
.......................AGACGGACAGTAACTACACGTG............................................................................................................... 22 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGTTGCAGTCGGACAGTAACT...................................................................................................................... 24 3 3 0.33 1 0 0 1 0 0 0
.................CGACGGAGACGGACAGTAACT...................................................................................................................... 21 1 3 0.33 1 0 0 1 0 0 0
................TCGAAGGAGACGGACAGTAACT...................................................................................................................... 22 2 3 0.33 1 0 0 0 1 0 0
....AAAGTTGATGTCGCGATGGAGACGG............................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
.............GTCGCGACGGAGACGGACAGTAACT...................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
..............TCGCGATGGAGACGGACAGTAAC....................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
............TGTCGCGACGGAGACGGACAGTAACT...................................................................................................................... 26 1 3 0.33 1 0 0 1 0 0 0
............................AACAGTAACTACACGGGTGGTCTACCT..................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0
...............GACGATCGAGACGGACAGTAACT...................................................................................................................... 23 3 3 0.33 1 0 0 0 1 0 0
...............GGCGATGGAGACGGACAGTAACT...................................................................................................................... 23 1 3 0.33 1 0 0 1 0 0 0
..............CCGCGATGGAGACGGACAGTAAAT...................................................................................................................... 24 2 3 0.33 1 0 1 0 0 0 0
.............GTCGCGATGGAGACGGACAGTAACTA..................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
................GCGAAGGAGACGGACAGTAACT...................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0
...............CGCGATGGAGACGGACAGT.......................................................................................................................... 19 0 3 0.33 1 0 1 0 0 0 0
..............TCGCGATGGAGACGGACAGTA......................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................GTTGAAAAAAAACCCCTGGAGAT................ 23 2 3 0.33 1 0 1 0 0 0 0
..............TCGCGAGGGAGACGGACAGTAACT...................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
...............CGCGATGGAGACGGACAGTAAGT...................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
..........GATGTCGCGATGGAGACGGACAGT.......................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
..........................CGGACAGTAACTACACGGGTGGTCTACCT..................................................................................................... 29 0 3 0.33 1 1 0 0 0 0 0
..............................CAGTAACTACACGGGTGGTCTACCT..................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
.................CGATGGAGACGGACAGTAAGT...................................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGATGGAGACGGACAGTATCGA..................................................................................................................... 25 2 3 0.33 1 0 1 0 0 0 0
...............CGCGATGGAGACGGACAGTTACT...................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGAGGGTGACGGACAGTAACT...................................................................................................................... 24 2 3 0.33 1 0 0 1 0 0 0
..........AATGTCGCGATGGAGACGGACAGTAACT...................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0 0
..................................AACTACACGGGTGGTCTACC...................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0
................GCGATGGAGACGGCCAGTAACT...................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0
...............TGCGATGGAGACGGACAGTAACTACA................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0
..............GCGCGATGGAGACGGACAGTAACTA..................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0 0
..............TCGCGATGGAGACGGACAGTAACTC..................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
.............GTCGCGATGGAGACGTACAGTAACT...................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
...........ATGTCGCGATGGAGACGGACAGTTACT...................................................................................................................... 27 1 3 0.33 1 0 1 0 0 0 0
..............CCGCGAGGGAGACGGACAGTAACT...................................................................................................................... 24 2 3 0.33 1 0 1 0 0 0 0
...............CGGGATGGAGACGGACAGTAACC...................................................................................................................... 23 2 3 0.33 1 0 0 1 0 0 0
.............GTCGCGATGGAGACGGACAGTAACTAC.................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0
CGTTAAAGTTGATGTCGCGATGGAGA.................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
.................................TAACTACACGGGTGGTCTACCT..................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
..............TCGCGATGGAGACGGACGG........................................................................................................................... 19 1 4 0.25 1 0 1 0 0 0 0
...............CGCGATGGAGACAGACAGTAACT...................................................................................................................... 23 1 4 0.25 1 0 0 1 0 0 0
..............TCGCGATGTAGACGGACAGTAACT...................................................................................................................... 24 1 4 0.25 1 0 0 0 1 0 0
...................................ACTACACGGGTGGTCTAC....................................................................................................... 18 0 4 0.25 1 1 0 0 0 0 0
...................................ACTACACGGGTGGTCTACCTCAAGTTC.............................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0
................GAGATGTGGACGGACAGTAACT...................................................................................................................... 22 3 5 0.20 1 0 0 1 0 0 0
.........................................................................................................................................GATCTTCGAAAAGAGCCGT 19 3 20 0.15 3 3 0 0 0 0 0
........................................................................................................................................TGATGTTCGAAAAGAGCCG. 19 3 20 0.10 2 0 0 0 2 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6473:16914053-16914208 + dmo_136 G--CAATTTCAACTACAGCGCTACCTCTGCCTGTCATTGATGTGCCCACCAGATGGAGATCAAGTTTTGAAATGCTAAGAAATGTATGCATATATGAGGAGTTCATCCGGC------------------------------------------------------------------------------------------------------AAAGCGAACAACTTTTTATTGGGGACTTCTACAAGCTTTTCTTGGAA---
droWil2 scf2_1100000003343:4860-4937 + ATTTAATAAAAGCAGAGAGTCTAGTTGTACCAGAACTAGATGTTCCAACCCGATGGAGTTCGACTTACTCAATGTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_3993:1486-1720 - G--CAATTTCTACTACAGCGCTACCCCTGCCTGTCACCGATGTGCCCCCAAGATGGAGCTCAACTTATGAGATGCTAAAAAGTGTATGCATATACGAGGAGTTCATCCGGCAACACTTGCCTCAAAACTTGCTGCTAACAGAAAAGCAATGGGCCAACATCAAAGTGCTGCTGTATGTGCTGGAGCCGATTTCTGGAGCCACCAAAAAGTTGCAAAGCGAACAACTTTTTTTTGGGA--------------------------
droPer2 scaffold_26:167213-167454 + G--CAATTTCTACTACAGCGCTACCCATGCCTGTCACCGATGTGCCCACAAGATGGAGCTCAACTTTTGAGATGCTAAAAAGTGTATGCATATACGAGGAGTTCATCCGGCAACACTTGCCTCAAAACTTGCTGCTAACAGAAAAGCAATGGGCCAACATCAAAGTGCTGC---------------TGATTTCTGGAGCCACCAAAAAGTTGCAAAGCGAACAACTTTTT-TTGGGGACTTCTACAAGCTTTTCTTGGAC---
droBip1 scf7180000396426:336999-337130 + G--CAATTCCTGCAACATCGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTGGA-------------------------------------------------------------------------------------------------------------------GCTGGAGCCGATATCCGTGGCTACCAAAAAATTGCAGAGCGAACAGC-----------GACTTTTTCAAGCTTTTGTTGGAG---
droKik1 scf7180000301632:3119-3229 + G--CAATTGCTGCAACATCGTTACCGCTTCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACGTACGAGATGCTGAGAAATGTATGCATTTATGAGGAATTCATACACCAA------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453782:840312-840569 - G--CAATTGCTGCAACAACGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACGTACGAGATGCTGAAAAGTGTATGCAATTACGAGGAATTTATACACCAACACTTGCCACCAATTCGCCAACTAACGGAGCAGCAATGGACTGAAATCAAAGCACTGCTGTCTGTGCTGGAGCCGGTATCCGTGGCTACCAAAAAATTTCAGAGCGAACAGCTTTATTTTGGCGACTTTTTCAAGCTTTTGTTGGAG---
droTak1 scf7180000415685:4093-4240 - T--TAATTTGGAATTGCGGGCTATCGCAACCATACTTTGACGTACCGACCAGATGGAACTCAACATACAATATGTTGCAAAGCGTGCGAGGACATTATGAAGTA--CTGGG------------------------------------------------------------------------------------------------------AAGATAAGAGATTCAATTATCCGCATTTGTACC------AGTTGGCA---
droEug1 scf7180000409885:26630-26863 - G--CAATTGCTGCAACATCGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACATACGAGATGCTGAAAAGTGTATGCATTTACGAGGAATTCATACACCAACACTTGCCAC-----------------------CAATTCGCCAAT-TC---GCACTGCTGTCTGTGCTGGAGCCGATATCCGTGGCTACCAAAAAATTGCAGAGCGAACAGCTTTATTTTGGCGACTTTTTCAAGCTTTTGTTGGAGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
G--CAATTTCAACTACAGCGCTACCTCTGCCTGTCATTGATGTGCCCACCAGATGGAGATCAAGTTTTGAAATGCTAAGAAATGTATGCATATATGAGGAGTTCATCCGGC------------------------------------------------------------------------------------------------------AAAGCGAACAACTTTTTATTGGGGACTTCTACAAGCTTTTCTTGGAA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCTTGG.....24155.00555400010
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCTTGGA....25145.004530000150
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCTTG......23126.00261800080
..................................................................................TGTATGCATATATGAGGAGTTCATC............................................................................................................................................................25221.004218500811
...........................................................................................................................................................................................................................................GGACTTCTACAAGCTTTTCTTGG.....23110.00101000000
..............................CTGTCATTGATGTGCCCACCAGA..................................................................................................................................................................................................................2339.33282700010
..................................................................................TGTATGCATATATGAGGAGTTCATCC...........................................................................................................................................................2628.50171510001
..................................................................................TGTATGCATATATGAGGAGTTCAT.............................................................................................................................................................2428.00161600000
..................................................................................TGTATGCATATATGAGGAGTTCATCCGG.........................................................................................................................................................2826.50131200001
..................................................................................TGTATGCATATATGAGGAGTTCA..............................................................................................................................................................2326.00121200000
..................................................................................TGTATGCATATATGAGGAGTTCATCCG..........................................................................................................................................................2724.509900000
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCTTGGAA---2614.004400000
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCT........2114.004000040
...............................................ACCAGATGGAGATCAAGTTTTGA.................................................................................................................................................................................................2313.003210000
...........................................................................................................................................................................................................................................GGACTTCTACAAGCTTTTCTTG......2213.003300000
..............................CTGTCATTGATGTGCCCACCAG...................................................................................................................................................................................................................2232.678800000
..................................................................................TGTATGCATATATGAGGAGTTCATCCGGC------------------------------------------------------------------------------------------------------..................................................2922.505300011
..................................................................................TGTATGCATATATGAGGAGTTC...............................................................................................................................................................2222.004000031
..........................................................................................................................................................................................................................................GGGACTTCTACAAGCTTTTCTT.......2212.002200000
..............................CTGTCATTGATGTGCCCACCAGATGG...............................................................................................................................................................................................................2631.675500000
..............................CTGTCATTGATGTGCCCACCAGATGGA..............................................................................................................................................................................................................2731.675500000
...................................................................................GTATGCATATATGAGGAGTTCATC............................................................................................................................................................2421.503300000
..............................CTGTCATTGATGTGCCCACCAGATG................................................................................................................................................................................................................2531.334300010
.......TTCAACTACAGCGCTACCTCTGCCTG......................................................................................................................................................................................................................................2631.334400000
........................................................................................................................................................................................................................GCGAACAACTTTTTATTGGGGACTTC.....................2611.001010000
.........................................GTGCCCACCAGATGGAGATCAAGTTT....................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................TGGGGACTTCTACAAGCTTTTCTTG......2511.001100000
...................................................................................GTATGCATATATGAGGAGTTCATCC...........................................................................................................................................................2521.002200000
..............................CTGTCATTGATGTGCCCACCAGATGGAG.............................................................................................................................................................................................................2831.003300000
..................................................................................TGTATGCATATATGAGGAGTTCATCCGA.........................................................................................................................................................2821.002200000
................................................................................AATGTATGCATATATGAGGAGTTCA..............................................................................................................................................................2521.002200000
..................................................................................TGTATGCATATATGAGGAGTT................................................................................................................................................................2121.002200000
........................................................................................................................................................................................................................................TGGGGACTTCTACAAGCTTTTCTTGGAA---2811.001100000
......................................................................................................................................................................................................................AAGCGAACAACTTTTTATTG.............................2011.001100000
............................................................................................................................................................................................................................................GACTTCTACAAGCTTTTCTTGG.....2211.001100000
...........................................................................................................................................................................................................................................GGACTTCTACAAGCTTTTCTTGGAA---2511.001100000
................................................................................AATGTATGCATATATGAGGAGTTCAT.............................................................................................................................................................2621.002200000
...........................................................................................................................................................................................................................................GGACTTCTACAAGCTTTTCTTGGA....2411.001100000
....................................................ATGGAGATCAAGTTTTGAAATGC............................................................................................................................................................................................2311.001000001
......TTTCAACTACAGCGCTACCTCTGCC........................................................................................................................................................................................................................................2531.003200010
..............................CTGTCATTGATGTGCCCACCA....................................................................................................................................................................................................................2131.003300000
.....ATTTCAACTACAGCGCTACCTCTGC.........................................................................................................................................................................................................................................2531.003110010
..............................CTGTCATTGATGTGCCCACC.....................................................................................................................................................................................................................2030.672100010
..................................................................................TGTATGCATATATGAGGAGTTCATCCGT.........................................................................................................................................................2820.501100000
................................................................................AATGTATGCATATATGAGGAGTTC...............................................................................................................................................................2420.501100000
........................................................................................CATATATGAGGAGTTCATCCGG.........................................................................................................................................................2220.501000010
.....................................................................................ATGCATATATGAGGAGTTCATCCGGC------------------------------------------------------------------------------------------------------..................................................2620.501100000
................................................................................AATGTATGCATATATGAGGAGT.................................................................................................................................................................2220.501100000
..................................................................................TGTATGCATATATGAGGA...................................................................................................................................................................1820.501100000
..................................................................................TGTATGCATATATGAGGAGTTCATAT...........................................................................................................................................................2620.501100000
................................................................................AATGTATGCATATATGAGGAGTT................................................................................................................................................................2320.501000010
..................................................................................TGTATGCATATATGAGGAGTTCATG............................................................................................................................................................2520.501000010
...................................................................................GTATGCATATATGAGGAGTTCATCCGGC------------------------------------------------------------------------------------------------------..................................................2820.501100000
....................................................................................TATGCATATATGAGGAGTTC...............................................................................................................................................................2020.501100000
........................................................................................CATATATGAGGAGTTCATCC...........................................................................................................................................................2020.501000010
...................................................................................GTATGCATATATGAGGAGTTCATCCG..........................................................................................................................................................2620.501100000
.................................................................................ATGTATGCATATATGAGGAGTTCA..............................................................................................................................................................2420.501100000
...................................................................................GTATGCATATATGAGGAGTTCATCCGG.........................................................................................................................................................2720.501100000
.................................................................................ATGTATGCATATATGAGGAGTTC...............................................................................................................................................................2320.501100000
.................................................................................ATGTATGCATATATGAGGAGTTCATC............................................................................................................................................................2620.501100000
...............................TGTCATTGATGTGCCCACCAGATG................................................................................................................................................................................................................2430.331100000
.....ATTTCAACTACAGCGCTACCTCTGCCAAA.....................................................................................................................................................................................................................................2930.331100000
.......TTCAACTACAGCGCTACCTCTGCCT.......................................................................................................................................................................................................................................2530.331100000
..............................CTGTCATTGATGTGCCCAC......................................................................................................................................................................................................................1930.331100000
........TCAACTACAGCGCTACCTCTGC.........................................................................................................................................................................................................................................2230.331100000
.....ATTTCAACTACAGCGCTACCTCTGCCT.......................................................................................................................................................................................................................................2730.331000010
..........AACTACAGCGCTACCTCTGCCTG......................................................................................................................................................................................................................................2330.331100000
...............................TGTCATTGATGTGCCCACCAGATGGAG.............................................................................................................................................................................................................2730.331100000
.....ATTTCAACTACAGCGCTACCTCTGCC........................................................................................................................................................................................................................................2630.331100000
....................CTACCTCTGCCTGTCATTGATGTGC..........................................................................................................................................................................................................................2530.331010000
..........................CTGCCTGTCATTGATGTGCCCACC.....................................................................................................................................................................................................................2430.331100000
.....ATTTCAACTACAGCGCTACCTC............................................................................................................................................................................................................................................2230.331000010
......TTTCAACTACAGCGCTACCTC............................................................................................................................................................................................................................................2130.331100000
......TTTCAACTACAGCGCTACCTCTGCCT.......................................................................................................................................................................................................................................2630.331000010
......TTTCAACTACAGCGCTACCTCTGCG........................................................................................................................................................................................................................................2530.331100000
..............................CTGTCATTGATGTGCCCACCAGATGGT..............................................................................................................................................................................................................2730.331100000
G--CAATTTCAACTACAGCGCTACCTCTGC.........................................................................................................................................................................................................................................2830.331100000
......................ACCTCTGCCTGTCATTGATGTGCCCAC......................................................................................................................................................................................................................2730.331100000
......TTTCAACTACAGCGCTACCTCTGC.........................................................................................................................................................................................................................................2430.331100000
.........CAACTACAGCGCTACCTCTGCCTGT.....................................................................................................................................................................................................................................2530.331000010
..............................CTGTCATTGATGTGCCCACCAGAT.................................................................................................................................................................................................................2430.331100000
...............................TGTCATTGATGTGCCCACCAG...................................................................................................................................................................................................................2130.331100000
...........ACTACAGCGCTACCTCTGCCT.......................................................................................................................................................................................................................................2130.331000010
..............................CTGTCATTGATGTGCCCACCAGATT................................................................................................................................................................................................................2540.251100000
droWil2
ATTTAATAAAAGCAGAGAGTCTAGTTGTACCAGAACTAGATGTTCCAACCCGATGGAGTTCGACTTACTCAATGTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................TGTACCAGAACTAGATGTTCCAACCCGA..................................................................................................................................................................................................................2812.00202000
...............................................ACCCGATGGAGTTCGACTTACTCA................................................................................................................................................................................................2412.00202000
............................ACCAGAACTAGATGTTCCAACCCGA..................................................................................................................................................................................................................2511.00101000
........AAAGCAGAGAGTCTAGTTGTACCA.......................................................................................................................................................................................................................................2421.00202000
...............................................ACCCGATGGAGTTCGACTTACTCAATGT............................................................................................................................................................................................2811.00100010
ATTTAATAAAAGCAGAGAGTCTAGT..............................................................................................................................................................................................................................................2520.50101000
.......AAAAGCAGAGAGTCTAGTTGT...........................................................................................................................................................................................................................................2120.50100100
.............AGAGAGTCTAGTTGTACCAGAAC...................................................................................................................................................................................................................................2320.50101000
..............GAGAGTCTAGTTGTACCAGAAC...................................................................................................................................................................................................................................2220.50101000
.........AAGCAGAGAGTCTAGTTGTACCAG......................................................................................................................................................................................................................................2420.50101000
..TTAATAAAAGCAGAGAGTCTAGTTG............................................................................................................................................................................................................................................2520.50100010
dp5
G--CAATTTCTACTACAGCGCTACCCCTGCCTGTCACCGATGTGCCCCCAAGATGGAGCTCAACTTATGAGATGCTAAAAAGTGTATGCATATACGAGGAGTTCATCCGGCAACACTTGCCTCAAAACTTGCTGCTAACAGAAAAGCAATGGGCCAACATCAAAGTGCTGCTGTATGTGCTGGAGCCGATTTCTGGAGCCACCAAAAAGTTGCAAAGCGAACAACTTTTTTTTGGGA--------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
G--CAATTTCTACTACAGCGCTACCCATGCCTGTCACCGATGTGCCCACAAGATGGAGCTCAACTTTTGAGATGCTAAAAAGTGTATGCATATACGAGGAGTTCATCCGGCAACACTTGCCTCAAAACTTGCTGCTAACAGAAAAGCAATGGGCCAACATCAAAGTGCTGC---------------TGATTTCTGGAGCCACCAAAAAGTTGCAAAGCGAACAACTTTTT-TTGGGGACTTCTACAAGCTTTTCTTGGAC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................TT-TTGGGGACTTCTACAAGCTTTTCTT.......2720.501010000
.............................CCTGTCACCGATGTGCCCACAAGAT.................................................................................................................................................................................................................2520.501010000
.................................................................................................................................................................................................................................TTTTT-TTGGGGACTTCTACAAGC..............2320.501010000
G--CAATTTCTACTACAGCGCTACC..............................................................................................................................................................................................................................................2320.501010000
.......................................................................................GCATATACGAGGAGTTCATCCGGCAA......................................................................................................................................................2620.501010000
..........................................................................................................................................................................................................................GAACAACTTTTT-TTGGGGACT.......................2120.501001000
.....................................................................................................................................................................................................................AAAGCGAACAACTTTTT-TTGGGGACT.......................2620.501010000
droBip1
G--CAATTCCTGCAACATCGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTGGA-------------------------------------------------------------------------------------------------------------------GCTGGAGCCGATATCCGTGGCTACCAAAAAATTGCAGAGCGAACAGC-----------GACTTTTTCAAGCTTTTGTTGGAG---SizeHit CountTotal NormTotal
No Reads
droKik1
G--CAATTGCTGCAACATCGTTACCGCTTCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACGTACGAGATGCTGAGAAATGTATGCATTTATGAGGAATTCATACACCAA------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
G--CAATTGCTGCAACAACGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACGTACGAGATGCTGAAAAGTGTATGCAATTACGAGGAATTTATACACCAACACTTGCCACCAATTCGCCAACTAACGGAGCAGCAATGGACTGAAATCAAAGCACTGCTGTCTGTGCTGGAGCCGGTATCCGTGGCTACCAAAAAATTTCAGAGCGAACAGCTTTATTTTGGCGACTTTTTCAAGCTTTTGTTGGAG---SizeHit CountTotal NormTotal
No Reads
droTak1
T--TAATTTGGAATTGCGGGCTATCGCAACCATACTTTGACGTACCGACCAGATGGAACTCAACATACAATATGTTGCAAAGCGTGCGAGGACATTATGAAGTA--CTGGG------------------------------------------------------------------------------------------------------AAGATAAGAGATTCAATTATCCGCATTTGTACC------AGTTGGCA---SizeHit CountTotal NormTotal
No Reads
droEug1
G--CAATTGCTGCAACATCGTTACCGCTGCCCATAAATGATGTGCCAACAAGGTGGAGCTCGACATACGAGATGCTGAAAAGTGTATGCATTTACGAGGAATTCATACACCAACACTTGCCAC-----------------------CAATTCGCCAAT-TC---GCACTGCTGTCTGTGCTGGAGCCGATATCCGTGGCTACCAAAAAATTGCAGAGCGAACAGCTTTATTTTGGCGACTTTTTCAAGCTTTTGTTGGAGACASizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:34 PM