ID:

dmo_1348

 Coordinate:

scaffold_6498:1294090-1294240 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.9 -30.8 -30.7

Flybase annnotation

exon [dmoj_GLEANR_14181:2]; CDS [Dmoj\GI14102-cds]; intron [Dmoj\GI14102-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus-
mature
  1. scaffold_242:222-247 +
  2. scaffold_4178:3911-3936 +
  3. scaffold_6325:6916-6941 +
  4. scaffold_6347:11254-11279 +
  5. scaffold_6473:5262263-5262288 +
  6. scaffold_6473:12028687-12028712 +
  7. scaffold_6496:20968555-20968580 +
  8. dmo_1348  scaffold_6498:1294202-1294227 +
  9. scaffold_6500:7756390-7756415 +
  10. scaffold_6500:8254634-8254659 +
  11. scaffold_6500:13699220-13699245 +
  12. scaffold_6500:24955482-24955507 +
  13. scaffold_6500:29817956-29817981 +
  14. scaffold_6500:31864275-31864300 +
  15. scaffold_6500:32109025-32109050 +
  16. scaffold_6540:2834174-2834199 +
  17. scaffold_6540:11053450-11053475 +
  18. scaffold_6540:13547606-13547631 +
  19. scaffold_6540:30780013-30780038 +
  20. scaffold_6541:1048116-1048141 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGTCATCTGGGGTGGTTCGAAACCCCTTGACAATCCTCATAATATTCACGGTAAGTCAGAAACTGAAAATAAGAAAATCCTCTTAGGTTTCGTAAATGTTTTGCAAGTAATTCGAGTCTTGACCTTTGTGACCTTTTGGCGTATGATACAAGAATTATATAAAAACAAGTAAGAAGGCTCCAGTCGAGACTGCTCGACTAGGAGATACCCTGAACCCTCCAAGCTGATATTCTAATCATTCTGGACTTCTT
**************************************************(((((.((...((.((((.(((((......)))))..))))))...)).))))).(((......(((((((((...((.((((((((.(((((((((......)))))))........)).)))))).))))))))))))).....)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
................................................................................................................................................................................................................................TGATATTCTAATCATTCTGGACTTCT. 26 0 20 2.50 50 50 0 0
..................................................................................................................................................TACAAGAACTATATAACAACC.................................................................................... 21 3 7 1.29 9 9 0 0
................................................................................................................................................................................................................................TGATATTCTAATCATTCTGGACT.... 23 0 20 0.75 15 0 15 0
..................................................................................................................................................TACAAGAACTATATAACAAC..................................................................................... 20 2 6 0.67 4 4 0 0
..................................................................................................................................................TACAAGAACTATATAACAACCA................................................................................... 22 3 5 0.60 3 3 0 0
.................................................................................................................................................................................................................................GATATTCTAATCATTCTGGACTTC.. 24 0 20 0.40 8 8 0 0
...................................................................................................................................................ACAAGAACTATATAACAACCA................................................................................... 21 3 17 0.29 5 5 0 0
...................................................................................................................................................ACAAGAACTATATAACAACC.................................................................................... 20 3 20 0.25 5 5 0 0
....................................................................................................................................................................................................................................ATTCTAATCATTCTGGACTTC.. 21 0 20 0.15 3 3 0 0
...................................................................................................................................................ACAAGAACTATATAACAAC..................................................................................... 19 2 17 0.12 2 2 0 0
...........................................................................................................................................................................................GACTGCTCGACTAGGAGATACCCTGAA..................................... 27 0 20 0.10 2 2 0 0
..................................................................................................................................................................AAACAAGTAAGAAGGCTCCAGTCGAG............................................................... 26 0 20 0.10 2 2 0 0
........................................................................................................................................................................................CGAGACTGCTCGACTAGGAG............................................... 20 0 20 0.10 2 2 0 0
........................................................................................................................................................................................CGAGACTGCTCGACTAGGAGATAC........................................... 24 0 20 0.10 2 2 0 0
....................................................................................................................................................CAAGAACTATATAACAACCA................................................................................... 20 3 20 0.10 2 2 0 0
.................................................................................................................................................CTACAAGAACTATATAACAAC..................................................................................... 21 3 17 0.06 1 1 0 0
..............................................................................................................................................................................................................ACCCTGAACCCTCCAAGCTGA........................ 21 0 20 0.05 1 1 0 0
..................................................................................................................................................TACAAGAACTAGATAACAAC..................................................................................... 20 3 20 0.05 1 1 0 0
..........................................................................................................................................................................................AGACTGCTCGACTAGGAGATACCCTGA...................................... 27 0 20 0.05 1 1 0 0
..................................................................................................................................................................................TCCAGTCGAGACTGCTCGACT.................................................... 21 0 20 0.05 1 1 0 0
..................................................................................................................................................................AAACAAGTAAGAAGGCTCCAGT................................................................... 22 0 20 0.05 1 0 0 1
.........CGGTGGTTCGAATCCACT................................................................................................................................................................................................................................ 18 3 20 0.05 1 1 0 0
..........................................................................................................................................................................................AGACTGCTCGACTAGGAGA.............................................. 19 0 20 0.05 1 1 0 0
.......................................................................................................................................................................................................AGGAGATACCCTGAACCCTCCAAGC........................... 25 0 20 0.05 1 1 0 0
...................................................................................................................................................................................CCAGTCGAGACTGCTCGACTAGGAG............................................... 25 0 20 0.05 1 0 1 0
...........................................................................................................................................................................................................................CAAGCTGATATTCTAATCATTCTGGAC..... 27 0 20 0.05 1 0 1 0
..............................................................................................................................................................ATAAAAACAAGTAAGAAGGCTCCA..................................................................... 24 0 20 0.05 1 0 0 1
...........................................................................................................................................................................................GACTGCTCGACTAGGAGATACCCTG....................................... 25 0 20 0.05 1 0 1 0

Anti-sense strand reads

ACAGTAGACCCCACCAAGCTTTGGGGAACTGTTAGGAGTATTATAAGTGCCATTCAGTCTTTGACTTTTATTCTTTTAGGAGAATCCAAAGCATTTACAAAACGTTCATTAAGCTCAGAACTGGAAACACTGGAAAACCGCATACTATGTTCTTAATATATTTTTGTTCATTCTTCCGAGGTCAGCTCTGACGAGCTGATCCTCTATGGGACTTGGGAGGTTCGACTATAAGATTAGTAAGACCTGAAGAA
**************************************************(((((.((...((.((((.(((((......)))))..))))))...)).))))).(((......(((((((((...((.((((((((.(((((((((......)))))))........)).)))))).))))))))))))).....)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V041
embryo
 V049
head
 V056
head
 M060
embryo
..................................................................................................................................................ATGTTCTTGATATATTGTTG..................................................................................... 20 2 6 7.33 44 34 10 0 0 0 0
...................................................................................................................................................TGTTCTTGATATATTGTTG..................................................................................... 19 2 17 3.24 55 37 18 0 0 0 0
..................................................................................................................................................ATGTTCTTGATATATTGTTGG.................................................................................... 21 3 7 3.14 22 21 0 0 1 0 0
..................................................................................................................................................ATGTTCTTGATATATTGTTGGT................................................................................... 22 3 5 2.00 10 8 2 0 0 0 0
...................................................................................................................................................TGTTCTTGATATATTGTTGG.................................................................................... 20 3 20 1.75 35 18 16 0 1 0 0
...................................................................................................................................................TGTTCTTGATATATTGTTGGT................................................................................... 21 3 17 0.65 11 10 1 0 0 0 0
.................................................................................................................................................GATGTTCTTGATATATTGTTG..................................................................................... 21 3 17 0.65 11 3 5 0 0 3 0
................................................................................................................................................................................................................GGACTTGGGAGGTTCGACTATAAGAT................. 26 0 20 0.50 10 0 0 10 0 0 0
...................................................................................................................................................TGTTCTTGATATATTTTTGGTTA................................................................................. 23 3 5 0.20 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................TGGGAGGTTCGACTATAAGA.................. 20 0 20 0.05 1 1 0 0 0 0 0
.............................TGATAGGAGTATTATAAT............................................................................................................................................................................................................ 18 2 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................ATTCTTCCGAGGTCAGCTCTGACG.......................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................TTGGTCATTCTTCCGAGGTCAGCTCT.............................................................. 26 1 20 0.05 1 0 0 0 0 0 1
..............................................................................................................................................................................TCCGAGGTCAGCTCTGACGAG........................................................ 21 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:1294040-1294290 + dmo_1348 TGTCATCT---GGGGTGGTTCGAAACCCCTTGACAATCCTCATAATATTCACGGTAAGTC----------AGAAACTGAAAATAAGA------------------AAATCCTCTTAGGT-------------------------------------------------TTC----------------------------------------GTAAATGTTTTGCAAGTAATTC--GA-----------------------------------GTCTTGACCTTTGTGACCTTTTGGCGTATGATACAAGAA---------TTATATAAAAACAAGTAAGAAGGCTCCAGTCGAGACTG---CTCGACTAGGAGATACCCTGAACCCTCCAA--GCTGATAT------------------------------TCTAATCATT---CTGGACTTCTT
droVir3 scaffold_12970:4828674-4828856 - GGTTTA----------------AAA---CTCGATAATTCTCGTAATATAA-TCAAAAGTT----------TCTA--CAAA-ATCGGGGATTAAACCTGTTTATAAATATTCT--------------------T-----------------------------------------------GAACCAACTAGTGCTTGGATGTGTTATTTCT---------------------------------------------------------------------TCAAG---------------------AAAAT---------TTATATA-GAACAAGTAAGA-GGTTCTAGTCGGGAGCT---CCCGACTAGGGGATACCCTGAACCCT--------------------------------------------------------------------
droGri2 scaffold_15116:1177834-1178060 + TT-----------------------------GAAGGCCTGCATAACACTTTTGGTGTATTAAGGAATC--TAAA--TCC--ATATGT------------------AAATACACTAAGTA-------------------------------------------------TTTGAAATATTTTACTTGATTTGTTCATGAGTAAGGAATATCC---------------------------------------------------------------------TATAA---------------------AACAT---------GAACCTA--AAAAACTATGAATGCTGTAGTCGAGCGGG---CTTGATTACGATATACCCTGAATCCAACAGTTACAAATATTCTAGTCTATTATCAAGTTTAACTTCAAAA----------------------TC
droWil2 scf2_1100000004514:2412758-2412950 + ATTATATT-----------------------------------------CAATTTTA----------------------------------------------------------------------------------------ATCAATAAAATATTAAAATATGAATT----------------------------------------TAATACC------------------------------GTTAG---------GGTACGAAAAGACTTGACAATTTGGATCTTTCGCCATAT-ACACAAGT----------TAATATAAAATGAAGTAAGTA------AGTCGT-CTC----GCCGACTTTGGTATACCATACACCAGTAAA--GCAAATAT------------------------------TTCAAGCATTTTCACATGCTTCTT
dp5 Unknown_group_14:35134-35189 - TGTTATTT---GGGGCGGGTCGAAGCCCCTTGATAATCCGCACAATATCCATGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_106:86161-86216 + TGTTATTT---GGGGCGGGTCGAAGCCCCTTGATAATCCGCACAATATCCATGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13077:297896-297955 - TGTCATAT---GGGGTGGTTCTAAACCTTTAGACAATCCCCATAATATTCATGGTAAGCC----------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395141:7805-7859 + TGTTATAT---GGGGGGGTTCTAAACCGTTAGATAATCCCCATAACATTCATGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302413:138079-138192 - TGTTATAT---GGGGGGGTTCGAAACCCCTGGATAATCCACACAATATACATGGTAAGTG-------TACAAGAACTCGATCTAAGA------------------ATTTGGCATTCCTT-------------------------------------------------TTC----------------------------------------ATTTTTATTTTGCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droFic1 scf7180000454040:618599-618689 - GGTAATAT---GGGGTGGTTCTAAGCCTCTTGATAATCCTCATAACATACATGGTAAGTT----------CAAAT--ATAAA---GC---------------------TTTT--------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTATTAATATT----------------------------------------------------------------------------TT
droEle1 scf7180000490196:3593-3670 - GAACCTTT---G------------------------------CAATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--TAT---------AAAATATTTAAAAACAAGAAAGAACGCTATAGTCGAGTTC----CCCGACTATTAGATACCC----------------------------------------------------------------------------
droRho1 scf7180000779957:111607-111799 + C--------------------------TCCTAATAATTATCGTAAACTACATGGTATCTT----------AGAAA--TTCAATTTGG---------T-----------------------------------TTTATTCGTTCTAAGCAGAAAGCACTTAAAATGGGTTTC----------------------------------------GAATATG------------------------------TTTCG---------TAAGACAACAGAGTTTCCAATTT---------------------GACTTGAAGTTAAACTAAATAAAAACAAGAGAGAACGCTATAGTCGGGTGC----CCCGACTATCAGATACCC----------------------------------------------------------------------------
droBia1 scf7180000301495:1039821-1039930 - TGTTATAT---GGGGTGGTTCCAAACCTCTTGACAACCCTCATAATATACATGGTAAGTT----------TATA--ATAAAGTATGA---------TCCTTATAAACATCCTTCTATTC-------------------------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAATATTA--------------------------------------------------------------------------TG
droTak1 scf7180000414135:7458-7558 - GATTTTTG---TG----TTTTTAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAATAACATTG---------AAAGTATTCAAAAACAAGAGAGAACGCTATAGTCGGGTTCGTGTCCCGACTATCTAATACCCGACACTC---------------------------------------------------------------------
droEug1 scf7180000409804:1461637-1461705 - GTGTAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAA---------TAATAAAAAAACAAGAGGAAACGCTATAGTCGAGTGC----CGCGACTATAAGATACCC----------------------------------------------------------------------------
dm3 chr4:1039337-1039445 - TGTAATAT---GGGGCGGGTCGAAGCCACTTGACAATCCTCATAATATACATGGTGAGTT----------GTAT--TTAGAATAAGA---------TTTTTAAAATTTTACTCTTAAAATTT--------------------------------------------------------------------------------------------TATGTTTTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:1874005-1874114 + TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAAACAAGACAGAAAGCTATAGTCGAGTTC----CCAGACTATCAGATACTCTTAACTCAGTTAGTGTGAAT-------------------GCGAAC-TCGAAATTTCATCATTTTTCTGGAATATTT
droSec2 scaffold_26:39857-39968 + AATAATTCCCTCGGGCACTGTTAATTTTTAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACGG-GCACAACCA---------AAATATAAAAACAAGAGAGAATACTATAGTCGAGTTC----CCCGAATATCAGATACTCATAATTTT------------------------------------------------------------------TC
droYak3 3L:7291429-7291609 - AAATTAAA---AATGCAATTGAAAAA------------------------------------------------------------------------------TAATTACTCTTTGGTTTCTTCATTTAATTATCTTCTTT----------GGCACTTA------------------------------------------------------------------GGAACTCTAAAGTCTGAATCTGTTTAGGGAACTTTTTACGACATCAAAGTG-------G---------------------AATAT---------TTATTTAAAAACAAGAGAGAACGCTATAGTCGAGTTC----CCCGACTATCTGATACCC----------------------------------------------------------------------------
droEre2 scaffold_4512:230863-230934 + TGTTATAT---GGGGCGGATCCAAGCCACTTGACAATCCTCATAATATACATGGTAAGTT----------GAAT--TTAAAATAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGTCATCT---GGGGTGGTTCGAAACCCCTTGACAATCCTCATAATATTCACGGTAAGTC----------AGAAACTGAAAATAAGA------------------AAATCCTCTTAGGT-------------------------------------------------TTC----------------------------------------GTAAATGTTTTGCAAGTAATTC--GA-----------------------------------GTCTTGACCTTTGTGACCTTTTGGCGTATGATACAAGAA---------TTATATAAAAACAAGTAAGAAGGCTCCAGTCGAGACTG---CTCGACTAGGAGATACCCTGAACCCTCCAA--GCTGATAT------------------------------TCTAATCATT---CTGGACTTCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................TGATAT------------------------------TCTAATCATT---CTGGACTTCT.26202.50505000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGATAT------------------------------TCTAATCATT---CTGGACT....23200.75150000150
............................................................................................................................................................................................................................................................................................................................................................................................................GATAT------------------------------TCTAATCATT---CTGGACTTC..24200.408800000
...............................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------------TCTAATCATT---CTGGACTTC..21200.153300000
.................................................................................................................................................................................................................................................................................................................................................................GACTG---CTCGACTAGGAGATACCCTGAA........................................................................27200.102200000
........................................................................................................................................................................................................................................................................................................................................AAACAAGTAAGAAGGCTCCAGTCGAG.....................................................................................................26200.102200000
..............................................................................................................................................................................................................................................................................................................................................................CGAGACTG---CTCGACTAGGAG..................................................................................20200.102200000
..............................................................................................................................................................................................................................................................................................................................................................CGAGACTG---CTCGACTAGGAGATAC..............................................................................24200.102200000
.......................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAACCCTCCAA--GCTGA.........................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................AGACTG---CTCGACTAGGAGATACCCTGA.........................................................................27200.051100000
........................................................................................................................................................................................................................................................................................................................................................TCCAGTCGAGACTG---CTCGACT.......................................................................................21200.051100000
........................................................................................................................................................................................................................................................................................................................................AAACAAGTAAGAAGGCTCCAGT.........................................................................................................22200.051000001
................................................................................................................................................................................................................................................................................................................................................................AGACTG---CTCGACTAGGAGA.................................................................................19200.051100000
................................................................................................................................................................................................................................................................................................................................................................................AGGAGATACCCTGAACCCTCCAA--GC............................................................25200.051100000
.........................................................................................................................................................................................................................................................................................................................................................CCAGTCGAGACTG---CTCGACTAGGAG..................................................................................25200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................CAA--GCTGATAT------------------------------TCTAATCATT---CTGGAC.....27200.051000010
....................................................................................................................................................................................................................................................................................................................................ATAAAAACAAGTAAGAAGGCTCCA...........................................................................................................24200.051000001
.................................................................................................................................................................................................................................................................................................................................................................GACTG---CTCGACTAGGAGATACCCTG..........................................................................25200.051000010
droVir3
GGTTTA----------------AAA---CTCGATAATTCTCGTAATATAA-TCAAAAGTT----------TCTA--CAAA-ATCGGGGATTAAACCTGTTTATAAATATTCT--------------------T-----------------------------------------------GAACCAACTAGTGCTTGGATGTGTTATTTCT---------------------------------------------------------------------TCAAG---------------------AAAAT---------TTATATA-GAACAAGTAAGA-GGTTCTAGTCGGGAGCT---CCCGACTAGGGGATACCCTGAACCCT--------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TT-----------------------------GAAGGCCTGCATAACACTTTTGGTGTATTAAGGAATC--TAAA--TCC--ATATGT------------------AAATACACTAAGTA-------------------------------------------------TTTGAAATATTTTACTTGATTTGTTCATGAGTAAGGAATATCC---------------------------------------------------------------------TATAA---------------------AACAT---------GAACCTA--AAAAACTATGAATGCTGTAGTCGAGCGGG---CTTGATTACGATATACCCTGAATCCAACAGTTACAAATATTCTAGTCTATTATCAAGTTTAACTTCAAAA----------------------TCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATTATATT-----------------------------------------CAATTTTA----------------------------------------------------------------------------------------ATCAATAAAATATTAAAATATGAATT----------------------------------------TAATACC------------------------------GTTAG---------GGTACGAAAAGACTTGACAATTTGGATCTTTCGCCATAT-ACACAAGT----------TAATATAAAATGAAGTAAGTA------AGTCGT-CTC----GCCGACTTTGGTATACCATACACCAGTAAA--GCAAATAT------------------------------TTCAAGCATTTTCACATGCTTCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................GTAAGTA------AGTCGT-CTC----GCCGACTTT.....................................................................................25200.05100010
.............................................................................................................................................................................................................................................................................................................................................................TCGT-CTC----GCCGACTTTGGTAT................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................ATGAAGTAAGTA------AGTCGT-.....................................................................................................18200.05101000
...................................................................................................................................................................................................................................................................................................................................TATAAAATGAAGTAAGTA------AGTCGT-CT...................................................................................................26200.05100010
dp5
TGTTATTT---GGGGCGGGTCGAAGCCCCTTGATAATCCGCACAATATCCATGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................CTTGATAATCCGCACAATATCCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
droPer2
TGTTATTT---GGGGCGGGTCGAAGCCCCTTGATAATCCGCACAATATCCATGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TGTCATAT---GGGGTGGTTCTAAACCTTTAGACAATCCCCATAATATTCATGGTAAGCC----------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................TTTAGACAATCCCCATAATATTCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droBip1
TGTTATAT---GGGGGGGTTCTAAACCGTTAGATAATCCCCATAACATTCATGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGTTATAT---GGGGGGGTTCGAAACCCCTGGATAATCCACACAATATACATGGTAAGTG-------TACAAGAACTCGATCTAAGA------------------ATTTGGCATTCCTT-------------------------------------------------TTC----------------------------------------ATTTTTATTTTGCCTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droFic1
GGTAATAT---GGGGTGGTTCTAAGCCTCTTGATAATCCTCATAACATACATGGTAAGTT----------CAAAT--ATAAA---GC---------------------TTTT--------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTATTAATATT----------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droEle1
GAACCTTT---G------------------------------CAATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--TAT---------AAAATATTTAAAAACAAGAAAGAACGCTATAGTCGAGTTC----CCCGACTATTAGATACCC----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
C--------------------------TCCTAATAATTATCGTAAACTACATGGTATCTT----------AGAAA--TTCAATTTGG---------T-----------------------------------TTTATTCGTTCTAAGCAGAAAGCACTTAAAATGGGTTTC----------------------------------------GAATATG------------------------------TTTCG---------TAAGACAACAGAGTTTCCAATTT---------------------GACTTGAAGTTAAACTAAATAAAAACAAGAGAGAACGCTATAGTCGGGTGC----CCCGACTATCAGATACCC----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGTTATAT---GGGGTGGTTCCAAACCTCTTGACAACCCTCATAATATACATGGTAAGTT----------TATA--ATAAAGTATGA---------TCCTTATAAACATCCTTCTATTC-------------------------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAATATTA--------------------------------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droTak1
GATTTTTG---TG----TTTTTAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAATAACATTG---------AAAGTATTCAAAAACAAGAGAGAACGCTATAGTCGGGTTCGTGTCCCGACTATCTAATACCCGACACTC---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTGTAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAA---------TAATAAAAAAACAAGAGGAAACGCTATAGTCGAGTGC----CGCGACTATAAGATACCC----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGTAATAT---GGGGCGGGTCGAAGCCACTTGACAATCCTCATAATATACATGGTGAGTT----------GTAT--TTAGAATAAGA---------TTTTTAAAATTTTACTCTTAAAATTT--------------------------------------------------------------------------------------------TATGTTTTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................GAAGCCACTTGACAATCCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................21113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121000000000000000000000000000
.....TAT---GGGGCGGGTCGAAGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000061000000000000000000000000000
.....TAT---GGGGCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000001000000000
....................CGAAGCCACTTGACAATCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
....ATAT---GGGGCGGGTCGAAGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
........................GCCACTTGACAATCCTCATAATATACA....................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAATAT---GGGGCGGGTCGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000010000000000000000000000000000000000000000000010000000000000000000000010000
....................CGAAGCCACTTGACAATCCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...................TCGAAGCCACTTGACAATCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000
...AATAT---GGGGCGGGTCGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....ATAT---GGGGCGGGTCGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010100000000000000000000000000
.......T---GGGGCGGGTCGAAGCCACTTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..TAATAT---GGGGCGGGTCGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............GCGGGTCGAAGCCACTTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.......T---GGGGCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGAAGCCACTTGACAATCCTCATA...........................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTAATAT---GGGGCGGGTCGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
........................GCCACTTGACAATCCTCATAATATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCCACTTGACAATCCTCATAATATA......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTAATAT---GGGGCGGGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......T---GGGGCGGGTCGAAGCCACTTGACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGACAATCCTCATAATATA......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................TCGAAGCCACTTGACAATCCTCATAATA........................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGACAATCCTCATAATATACATG..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACTTGACAATCCTCATAATATACATG..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATAT---GGGGCGGGTCGAAGCCACTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCCACTTGACAATCCTCATAATAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GGCGGGTCGAAGCCACTTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......AT---GGGGCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGCCACTTGACAATCCTCATA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTAATAT---GGGGCGGGTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGGGCGGGTCGAAGCCACTTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AGTT----------GTAT--TTAGAATAAGA---------TT.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AATAT---GGGGCGGGTCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......T---GGGGCGGGTCGAAGCCACTTGACAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGAAGCCACTTGACAATCCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACTTGACAATCCTCATAATATACATGT.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ATGGTGAGTT----------GTAT--TTAGAA.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............GCGGGTCGAAGCCACTTGACAATCC................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGAAGCCACTTGACAATCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..TAATAT---GGGGCGGGTCGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........GGGGCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......T---GGGGCGGGTCGAAGCCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTAATAT---GGGGCGGGTCGAAGCCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TAT---GGGGCGGGTCGAAGCCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAATAT---GGGGCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......AT---GGGGCGGGTCGAAGCCACTTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............CGGGTCGAAGCCACTTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TAT---GGGGCGGGTCGAAGCCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
TGTAATAT---GGGGCGGGTCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............GCGGGTCGAAGCCACTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACTTGACAATCCTCATAATA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACTTGACAATCCTCATAATATACA....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAATAT---GGGGCGGGTCGAAGCCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGGGCGGGTCGAAGCCACTTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
TGTAATAT---GGGGCGGGTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................TCGAAGCCACTTGACAATCC................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................ACTTGACAATCCTCATAATATACT....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ACATGGTGAGTT----------GTAT--TTAGA......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......AT---GGGGCGGGTCGAAGCCACTTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGAAGCCACTTGACAATCCTCATAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGACAATCCTCATAATATACATGT.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................TTTTACTCTTAAAATTT--------------------------------------------------------------------------------------------TATG.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..TAATAT---GGGGCGGGTCGAAGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGACAATCCTCATAATAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTAATAT---GGGGCGGGTCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AATAT---GGGGCGGGTCGAAGCCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......T---GGGGCGGGTCGAAGCCACTTGACAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................CATGGTGAGTT----------GTAT--TTAGA......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................TAGAATAAGA---------TTTTTAAAATT............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............CGGGTCGAAGCCACTTGACAATCC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTAATAT---GGGGCGGGTCGAAGCCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................AATCCTCATAATATACATG..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................CACTTGACAATCCTCATAATATACATG..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATAT---GGGGCGGGTCGAAGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAAACAAGACAGAAAGCTATAGTCGAGTTC----CCAGACTATCAGATACTCTTAACTCAGTTAGTGTGAAT-------------------GCGAAC-TCGAAATTTCATCATTTTTCTGGAATATTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTGAAT-------------------GCGAAC-TCGAAATT......................251148.0014802126100070011100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATT......................24338.67116001000185230150000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTTC....................24124.0024000000901500000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTTCT...................25623.831430000008305910000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATTTC....................26115.001500000014460000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATTT.....................2538.67260000000412100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTTCA...................2516.00600000050100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTGAAT-------------------GCGAAC-TCGAAAT.......................2415.00500100003001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATTTCA...................2715.00500000001220000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAAT.......................2344.251700000007550000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATT......................2232.67800000070001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTT.....................2332.67800000060200000000
.................................................................................................................................................................................................................................................................................................................................................................................TCAGATACTCTTAACTCAGTTAGTGTGA..........................................................2812.00200000002000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTGAAT-------------------GCGAAC-TCGAAA........................2312.00200100001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCATTTTTCTGGAATAT..2051.80900000006210000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATTTCT...................2751.60800000002060000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGAAT-------------------GCGAAC-TCGAAATT......................2331.33400000030001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTAACTCAGTTAGTGTGAAT-------------------GCGAAC-..............................2811.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................T-------------------GCGAAC-TCGAAATTTCATCATT..............2311.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAT-------------------GCGAAC-TCGAAATTTCA...................2211.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................TCAGATACTCTTAACTCAGTTAG...............................................................2311.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTGAAT-------------------GCGAAC-TCGAAATTT.....................2611.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTAACTCAGTTAGTGTGAAT-------------------GCGAAC-..............................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................CAAGACAGAAAGCTATA...........................................................................................................1711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAT-------------------GCGAAC-TCGAAATTTC....................2311.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTTCAT..................2611.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTAACTCAGTTAGTGTGAAT-------------------GCGA.................................2611.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAT-------------------GCGAAC-TCGAAATT......................2131.00300100000011000000
............................................................................................................................................................................................................................................................................................................................................................GTCGAGTTC----CCAGACTATCAGATACTC............................................................................2711.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTC----CCAGACTATCAGATACTCTTAACTC.....................................................................2811.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAT-------------------GCGAAC-TCGAAATTTCA...................2411.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTGAAT-------------------GCGAAC-TCGAAATTTC....................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................TAGAAACAAGACAGAAAGCTATAGTCGAGT....................................................................................................3011.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGAAT-------------------GCGAAC-TCGAAATTTCT...................2650.80400000020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTTCTGGAATAT..17140.64900000005040000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAA........................2240.50200000001010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAA.........................1960.33200000000002000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATCATTTTTCTGGAATA...2130.33100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGAAT-------------------GCGAAC-TCGAAATTT.....................2430.33100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTGAAT-------------------GCGAAC-TCGAAATC......................2040.25100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTAGTGTGAAT-------------------GCGAAC-..............................2140.25100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAA.........................2160.17100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAT-------------------GCGAAC-TCGAAATTTCT...................2470.14100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................C----CCAGACTATCAGATAC..............................................................................1790.11100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-T.............................15100.10100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGAAT-------------------GCGAAC-..............................15200.10200000000002000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTGAAT-------------------GCGAAC-TCGAAATTTCTA..................28100.10100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAT-------------------GCGAAC-TCGAAATTTCTA..................26120.08100000010000000000
droSec2
AATAATTCCCTCGGGCACTGTTAATTTTTAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACGG-GCACAACCA---------AAATATAAAAACAAGAGAGAATACTATAGTCGAGTTC----CCCGAATATCAGATACTCATAATTTT------------------------------------------------------------------TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAATTAAA---AATGCAATTGAAAAA------------------------------------------------------------------------------TAATTACTCTTTGGTTTCTTCATTTAATTATCTTCTTT----------GGCACTTA------------------------------------------------------------------GGAACTCTAAAGTCTGAATCTGTTTAGGGAACTTTTTACGACATCAAAGTG-------G---------------------AATAT---------TTATTTAAAAACAAGAGAGAACGCTATAGTCGAGTTC----CCCGACTATCTGATACCC----------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................C----CCCGACTATCTGATACCC----------------------------------------------------------------------------19200.05110000000000
droEre2
TGTTATAT---GGGGCGGATCCAAGCCACTTGACAATCCTCATAATATACATGGTAAGTT----------GAAT--TTAAAATAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.GTTATAT---GGGGCGGATCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000

Generated: 05/18/2015 at 12:16 AM