ID:

dmo_1330

 Coordinate:

scaffold_6498:943531-943681 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.9 -18.7 -18.4

Flybase annnotation

CDS [Dmoj\GI14053-cds]; exon [dmoj_GLEANR_14099:5]; intron [Dmoj\GI14053-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
MINIME_DNUnknownUnknown+
mature
  1. scaffold_4054:1916-1936 -
  2. scaffold_4268:3497-3517 -
  3. scaffold_4394:126-146 -
  4. scaffold_4613:3227-3247 -
  5. scaffold_4672:48997-49017 -
  6. scaffold_5845:7034-7054 -
  7. scaffold_6362:253-273 -
  8. scaffold_6441:95898-95918 -
  9. scaffold_6496:17080840-17080860 -
  10. scaffold_6496:25880894-25880914 -
  11. dmo_1330  scaffold_6498:943622-943642 -
  12. scaffold_6498:2336193-2336213 -
  13. scaffold_6500:29405877-29405897 -
  14. scaffold_6500:30950560-30950580 -
  15. scaffold_6500:31084540-31084560 -
  16. scaffold_6540:921672-921692 -
  17. scaffold_6540:2826574-2826594 -
  18. scaffold_6541:118724-118744 -
  19. scaffold_6541:968629-968649 -
  20. scaffold_6541:1294801-1294821 -
  21. scaffold_280:835-855 +
  22. scaffold_2124:802-822 +
  23. scaffold_2307:4042-4062 +
  24. scaffold_2883:1843-1863 +
  25. scaffold_3581:386-406 +
  26. scaffold_3983:3243-3263 +
  27. scaffold_4236:235-255 +
  28. scaffold_4258:1059-1079 +
  29. scaffold_5020:1400-1420 +
  30. scaffold_6130:239-259 +
  31. scaffold_6462:5586-5606 +
  32. scaffold_6482:1418175-1418195 +
  33. scaffold_6496:15508499-15508519 +
  34. scaffold_6496:26774386-26774406 +
  35. scaffold_6498:2553760-2553780 +
  36. scaffold_6500:26385770-26385790 +
  37. scaffold_6500:30596647-30596667 +
  38. scaffold_6500:31701865-31701885 +
  39. scaffold_6680:2615642-2615662 +
  40. scaffold_6680:24143451-24143471 +
  41. scaffold_359:179-199 +
  42. scaffold_525:446-466 +
  43. scaffold_3051:980-1000 +
  44. scaffold_4241:4075-4095 +
  45. scaffold_6115:41629-41649 +
  46. scaffold_6442:10201-10221 +
  47. scaffold_6473:4051624-4051644 +
  48. scaffold_6484:3191-3211 +
  49. scaffold_6493:82037-82057 +
  50. scaffold_6496:24344672-24344692 +
  51. scaffold_6498:3001357-3001377 +
  52. scaffold_6498:3009218-3009238 +
  53. scaffold_6500:29764714-29764734 +
  54. scaffold_6500:30089873-30089893 +
  55. scaffold_6540:36325-36345 +
  56. scaffold_6540:1031451-1031471 +
  57. scaffold_6540:2030796-2030816 +
  58. scaffold_6540:3590627-3590647 +
  59. scaffold_6540:23997464-23997484 +
  60. scaffold_6680:24548775-24548795 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCAGCTCGTCGCCCTGATCAAGAATATATTGTATATACACTATGGGGTCTGCCACGCTTCCTTATGCCTGTTACATACATTTCAACAAAACCATTATACCCTGATTTCCCATTCTCAATGCTAAGGCAAAGAGTCCTAGGTATAGCAAATATTATTTATTTGATTAAACTGACAAAGTCCATTGTTATTTTAAATTTTAGCGTCAAAATTGTGGACCCAGCGGAGGACCCATGCAATTTGGGCGTCGTTC
**************************************************...((.((........)).)).......................(((((((..((.........(((..(((....)))..)))))...)))))))((((((.....)))))).(((((.((((((......)))))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
.........................................................................................AACCATTATACCCTGATTTCC............................................................................................................................................. 21 0 20 1.95 39 39 0
................................................................................................................................................................................................................ATTGTGGACCCAGCGGAGGACCCATGCA............... 28 0 1 1.00 1 0 1
......................................................................................................TGATTTCCCATTCTCAATGCTAAGGC........................................................................................................................... 26 0 1 1.00 1 1 0
........................................CGATGGGGTCTGCCACGC................................................................................................................................................................................................. 18 1 11 0.09 1 0 1
...................................................................................CAACAAAACCATTATACCCTG................................................................................................................................................... 21 0 20 0.05 1 0 1

Anti-sense strand reads

GAGTCGAGCAGCGGGACTAGTTCTTATATAACATATATGTGATACCCCAGACGGTGCGAAGGAATACGGACAATGTATGTAAAGTTGTTTTGGTAATATGGGACTAAAGGGTAAGAGTTACGATTCCGTTTCTCAGGATCCATATCGTTTATAATAAATAAACTAATTTGACTGTTTCAGGTAACAATAAAATTTAAAATCGCAGTTTTAACACCTGGGTCGCCTCCTGGGTACGTTAAACCCGCAGCAAG
**************************************************...((.((........)).)).......................(((((((..((.........(((..(((....)))..)))))...)))))))((((((.....)))))).(((((.((((((......)))))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V049
head
 V110
male body
.........AGCGGGACTAGTTCTTATATA............................................................................................................................................................................................................................. 21 0 20 0.70 14 14 0 0
.AGTCGAGCAGCGGGACTAGTT..................................................................................................................................................................................................................................... 21 0 20 0.60 12 12 0 0
.............................................................................................................GGTAATAGTCACGATGCCGTT......................................................................................................................... 21 3 3 0.33 1 0 1 0
......................................................................CAATGTATGTAAAGTTGTTTT................................................................................................................................................................ 21 0 20 0.30 6 6 0 0
................................................................................................TATGGGACTAAAGGGTAAGAG...................................................................................................................................... 21 0 6 0.17 1 1 0 0
..GTCGAGCAGCGGGACTAG....................................................................................................................................................................................................................................... 18 0 20 0.10 2 2 0 0
..........................................................................................................................................TCCGTATCGTTTTTAATAA.............................................................................................. 19 2 17 0.06 1 0 0 1
.....................................................................................TGTTTTGGTAATATGGGACTAAAGG............................................................................................................................................. 25 0 20 0.05 1 1 0 0
.................................................................................AAGTTGTTTTGGTAATATGGGACTAA................................................................................................................................................ 26 0 20 0.05 1 1 0 0
............................................................................ATGTAAAGTTGTTTTGGTAATATGGG..................................................................................................................................................... 26 0 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:943481-943731 - dmo_1330 CTCAGCTCGTCGCCCTGATCAAGAATATATTGTATATACACTATGGGGTCTGCCACGCTTCCTTATGCCTGTTACATACAT-------TTCAAC-AAAACCATTATACCCTGA----------TTTCCCATTCTCAAT------------------------GCTAAGGCA-----AAGAGTCCTAGGTATAGCA--------------------------------------------AATATTAT----------------TTATTTG----------------------------------------------------AT-------------TAAACTGACAAAGTCC-----------------------------------------------------------------ATTGTTATTTTAAATT------------------------------------------------------------------------------------TTAGCGTCAAAA-----------------------------------------------------------------------TTGTG-GACC---------------------------------------------------CAGCGGA-----------GGA-----------------CCCATGCAATTTGGGCGTCGTTC
droVir3 scaffold_13042:5107123-5107350 + CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAGGTGCTTCCTTCTGCCTGTTACATACATTTGGATTTTGCAC-AAATACAATATACCCTC-----------ATACCCATTTTTAATGGGTTCAGGGTAT---------------------AAAAA----CC------------G----------------------TGAACCTGAGGA--------------------------------------------------------AACAAGTCTGTTTTTAATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCGGTAGTTTGCAGAACAGC---TGACAACTTATCGATATT------------------------------------------------------------------------------------------------------TG------------------------------------------------------------------------------------------CTGTTAATT
droGri2 scaffold_15110:24412788-24412978 + CTCGGCTGTTGACCCTGATCAAGAATATAC-ATATATACTTTATGGGGTTGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TATCAC-AAAACCATTATACCCTT-----------TGACCCATTTTTAATGGATTCTGGGTATAAAAATGCGATAT--------TATAT----AT------------GTA--------------------TTATC-----------------T------------------------------------------------------------------------------------------------------TTCAAT---------------------------------------------------------------------ATTATCATATTAT-----------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------G-----------T--------------------------------T-----------GGT-----------------G-------------------TCA
droWil2 scf2_1100000004909:1631363-1631605 - CTCAGCTTCTCATGCTGATCAAGAATTT-----ATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACAT-------CTGACC-AAATTTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAA----TCTTTAGTGAAACA--------------------------------------------AATGTAAC-------------------------------------TAAA-----------------------------------TGAAATGAATAAAT-------------------------------------------------------------------------------------------------TTCAATCTGCCATGATTAACTGAAATTTAAATAGAAAACTATTTACTGCTAGGATCTAGCCCAGGATATGACAA-------------------------------------------------------------------------------------------------------------TTT--TT------------------------------------------------------------------------------------------CCGTTTTCC
dp5 3:14000782-14001008 + CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCA-----------ATACTCAT----TTTGAGTATCGGGTAT---------------------AAAAA----TT------------GAGTTCAGTTCTCAGACT-------GAA-------------------------------------------------------------------------------------CTTAAAAACAATTGAA-------------TAAATCATCAAAGTCCTCGAATGTACT--TGAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------ATA-----------------CTCGTACAATTT--------GGG
droPer2 scaffold_461:6623-6839 + CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCA-----------ATACTCAT----TTTGAGTATCGGGTAT---------------------AACAA----AT------------ATA--------------------TTAAA-----------------ATTCAATGGTGA------------------------------------------------------------------------------------------------------------TTCT--CG---------------------------------------------------------------AAT------------------------------------------------------------------------------------CCAG-G----------------------------------------TAAGGGCTA---------TGGACGAATCCGACCAGCAATAT------------ATT--TG------------------------------------------------------------------------------------------GCATGGAGC
droAna3 scaffold_13258:1559998-1560191 + CTCAGGAGGTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAACAAAG---T------------G----------------------TAAAAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATACCT---------------------------------------------------------------------------------------TT-G----------------------------------------CAGACGGTATTATAACTTT----------GGTCAAAAGCGTGCAACG---------------------------------------------------CAGAGAA-----------GGA-----------------G------------------CCAT
droBip1 scf7180000396653:8266-8488 - CTCAGGAGGTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGGAC-AAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAAAG---G------------AAG----------------------CAATATA-----A-------A--------------------AAAAA--TCCTACGCGTTGTCACTAAACAAAGGTATTTTGAATATACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTTCAG----------AACGACCGGTT---------------------------------------------------------------------------------------------------------------A-----------AGA-----------------GTTGTGTGAGTT----ATGTGTC
droKik1 scf7180000299681:13450-13661 - CTCGACTGTTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTG---------------------------------------------------CAAGGGTATAAAAA----GT------------AAG----------------------CA-----------------AA--------------------AAAAA--TCCTACGTGT-GTCGATAGACAAAGGTATTTTGGATATACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTTCAG----------ATCGATCGGTT--GATTT-----------------------------------------------------------G-----------T---------------------------------------------------------------------TCGAGTT----ATGTTTC
droFic1 scf7180000452451:13632-13826 - CTCTGCTCGTGATGCTGATCAAGAATAT-----ATATCCTTTATGGGGTCTGAGGTGTCTCCTTCATTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTT-----------T-GCTC------T-----TC---------------------AAGGGTATAAAAA----GC------------TTA--------------------TTA----------------------------------------------------------------------------------------------------------------------GCTGAACAAAGTTCCTTTCTATGCT--AGAGCTGAA-------------------------------------------ATTATTATTATGGATA------------------------------------------------------------------------------------TTGGAGTGGAGA-----------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------TTG
droEle1 scf7180000486820:85-282 + CTCTACTAGTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGACGTCTCCTTCACTGCGTTGCAAACTT-------TTGACT-GAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAA----TT------------A----------------------CTAA-----------------AATATAAC----------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATACCC---------------------------------------------------------------------------------------TT-G----------------------------------------CAGAGGGTATTATAATTTC----------AGTCAGAAGTTTGCAACG---------------------------------------------------CAGTGAA-----------GGA-----------------G------------------ACAT
droRho1 scf7180000778143:5561-5774 - CTCGGCTAGTCATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGCTTCCTTCTACCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTT-----------TTGCTC------TACGAGTAACGGGTAT---------------------ACAAA----TT------------T----------------------TTTA-----------------TATGATAT----------------T------CTA-----------------T---------TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-G----------------------------------------TAAATGCCA------TTTT----------GTTGGAAATTTTGTAACT----------------------------------------------------TGTGAGGAACCGTAAGACGG-----------------CCCTCACAATT-----------T
droBia1 scf7180000302255:323886-324097 + CTCGTCTAGTGACGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGTCTCCTTAACTGCGTCGCAAACTC-------CTGACT-GAAATCATTATACCCTT-----------T--------------------------------------GCAAGGGTATAAAAAAA---C------------A----------------------TAAAAATTA-----TG---------------------------ATTTA--TGATTCATGTTAACATTCGTAAT---------TGATATAATTT--------------------------TGTGTC-------------------------------------------------------------------------------------------ATCA---------------------------------------------------------------------------------------AT--------------------GTGAC----------A----------------------------------------------T--------------------------------------------------------GGT-----------GAG-----------------CTCGTATAATTT-----TGATGT
droTak1 scf7180000411197:18912-19124 + CTCGGCTAGTGACCCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGCTTCTTTCTGGCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTT-----------TTACTC------TACGAGTAACGGGTAT---------------------AAAAA----GT------------AC------CTCCTAAAATAAAATAAAAAATAA-----TT---------------------------ATA--------------------------------T--TTAATTTAT------------------------------AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCAATATT-----------------------------------------------------------------------------------GGA-AAAA---------------------------------------------------CCTCGAA----------GGAA-----------------GCTATGAAATT-----------T
droEug1 scf7180000407006:3374-3577 - CTTCGCCATTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGCAAAAGCTTCCTTCTATCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTACTC------TACGAGTAACGGGTAT---------------------AATAA----CA------------A----------------------TAAAAATAA-----TT---------------------------ATA-------TA-----------------C---------AGATATAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAATAAAG----------AAAAAATGGCT--AAAC-TAAGC-------------------------------------------------------------------------------------------------GCA-----------ATG-----------------CCCA-------------TGCAAT
dm3 chr3L:23626917-23627137 + CTCAGCTATTGGTTCTGATCAAGAACAT-----ATATACTTTATATAGTCGGAAAGGCTTCCTTCTGCCTGTTACATACTT-------TTCAACTGAATCTACTATTATTTTTTCTCTTTATTTTACTC------TACGAGTAACGGGTAT---------------------AAAAA----TG-------------TA--------------------TTTAC-----------------TTTTTATTTCGGCCAGACAAAAAG---------CCC------GTTTTA-----------------------------------CAAAACGAATAA-------------------------TTCTAACG---------------------------------------------------------------ATT------------------------------------------------------------------------------------TCAA-A-----------------------TCGAA----------A--------------------------------------TC----------------------------------------------------------------------------------------------------GT---------------GAA
droSim2 4:384282-384499 + CTCGGCTATAGATCCTGATCAAGAATAT-----ATATATTTTATATAGTCGGAAACTCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTACTC------TACGATTAAGGGGTAT---------------------ACAAA----TT------------T------------------------------------------------TATGTTGA------------------------------------------------------------------------------------------------------------TCCT--ATAACGAAAGTTTAATAACACAATATTTAAATTTGTATTAAATCGAAAGTTCA---------------------------------------------------------------------------------------------------------------------------------------T-------TT--------------------GGTTA----------------------------------G-----------T---------------------------------------------------------------------TCAATTT----GTAAAGT
droSec2 scaffold_109:42029-42222 + TTCGACTATTGATCCTGATCAAGAATGT-----ATATACTATATATGGCCGGAAACGATTCATTCTGCCTGCTGCATATTT-------TCCATC-GAATCGGTAATAGTATT-----------A--------------------------------------GCATTCA-----AAA----TT------------T------------------------------------------------TATATTAC---------------------------------------------------------TC--------------------------CTTGTT-------------------------------------------------------------------------------------------ATTT---------------------------------------------------------------------------------------AGAAAATATAG----------TTAAAATG-----------------------------------------------------------------------------------------------------------------AAAAGCAACAAA-AAGCCTTAACATTTATTGTATCAA-------------CAAAAT
droYak3 v2_chrUn_5167:6048-6265 - CTCGGCTATTGGTCCTGATCAAGAATAT-----ATATACTTTATATGGTCGGAAACCCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTAGTC------TACGAGTAACGGGTAT---------------------AAATA----TG------------T----------------------TTTA---------------------------------------------------------------------------------TTTA--------------------------------CATGGACGAT---------------------------------------------------------------------ATCATCATATTT-----------------------------------------------------------------------------------------------AGCAAAAATAAAAAAATATAGAATCATTTTTTAAA--A------------------------------------GTGTGGGCGTGG---------------------------------------------------CAG-------------------------------------------ATTT-------GGGC
droEre2 scaffold_4784:22663616-22663845 - CTCGGCTATTGATCCTGATCAATAATATATTATATAT-----------------------ACTTCTGCCTGTTACACACTT-------TTCAAG-GAATCTAGTATACGCTT-----------TTACTC------TACGAGTAAAGCGTATAAAT-------ATTA-----------------------------GAG-------------------------TTAAGGAAACTTTACACATAGTAT----------------TCATCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAGTTTACAACGTAATGGTTGTTTGATTTTGATCAGTTCTAGCTGGCTTCAATGTTATGTACCTAACAGT-----------AAA-----------------CACAAGT--------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTCAGCTCGTCGCCCTGATCAAGAATATATTGTATATACACTATGGGGTCTGCCACGCTTCCTTATGCCTGTTACATACAT-------TTCAAC-AAAACCATTATACCCTGA----------TTTCCCATTCTCAAT------------------------GCTAAGGCA-----AAGAGTCCTAGGTATAGCA--------------------------------------------AATATTAT----------------TTATTTG----------------------------------------------------AT-------------TAAACTGACAAAGTCC-----------------------------------------------------------------ATTGTTATTTTAAATT------------------------------------------------------------------------------------TTAGCGTCAAAA-----------------------------------------------------------------------TTGTG-GACC---------------------------------------------------CAGCGGA-----------GGA-----------------CCCATGCAATTTGGGCGTCGTTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................AACCATTATACCCTGA----------TTTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.95393900000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------TTGTG-GACC---------------------------------------------------CAGCGGA-----------GGA-----------------CCCATGCA...............2811.001000010
..............................................................................................................TGA----------TTTCCCATTCTCAAT------------------------GCTAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................CAAC-AAAACCATTATACCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
droVir3
CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAGGTGCTTCCTTCTGCCTGTTACATACATTTGGATTTTGCAC-AAATACAATATACCCTC-----------ATACCCATTTTTAATGGGTTCAGGGTAT---------------------AAAAA----CC------------G----------------------TGAACCTGAGGA--------------------------------------------------------AACAAGTCTGTTTTTAATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCGGTAGTTTGCAGAACAGC---TGACAACTTATCGATATT------------------------------------------------------------------------------------------------------TG------------------------------------------------------------------------------------------CTGTTAATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................TCAAGAATAT-----ATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.70340000000000000000000000000034000000000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AAATACAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.302600100000000000000000000001600000000000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AAATACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.05210000000000000000000000030130000000000005000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAACAGC---TGACAACTTATCGATA.............................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTTAATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCGGTAGTTTGC........................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................ACCTGAGGA--------------------------------------------------------AACAAGTCTGTTTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.408000000000000000000000000008000000000000000000000000000000000000
............TGCTGATCAAGAATAT-----ATATACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.357000000000000000000000000000400300000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.306000060000000000000000000000000000000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.306000000000000000000000000060000000000000000000000000000000000000
.................................................................................................................................ATTTTTAATGGGTTCAGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204004000000000000000000000000000000000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-AAATACAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000400000000000000000000000000000000000000
....................AAGAATAT-----ATATACTTTATGGGGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.153001000000000000000000000000000000020000000000000000000000000000
.........................................................................ACATACATTTGGATTTTGCAC-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000001001000000000000000000000000000010
........TTGATGCTGATCAAGAATAT-----ATATACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000000200010000000000000000000000000000
.................................ATATACTTTATGGGGTCGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000002000000000000000001000000000000000000000000000000000000000
...........ATGCTGATCAAGAATAT-----ATATACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000200000000000000000000000000000000000000
....................................................................CTGTTACATACATTTGGATTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000020000000000000000000000000000000
...............................................................................................................................CCATTTTTAATGGGTTCAGGGTAT---------------------AAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102000000000000000000000000002000000000000000000000000000000000000
......................GAATAT-----ATATACTTTATGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000020000000000000000000000000000000000
................................................................................................................................CATTTTTAATGGGTTCAGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................CCATTTTTAATGGGTTCAGGGTAT---------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000200000000000000000000000000000000000000
.....CTATTGATGCTGATCAAGAATAT-----AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000000000200000000000000000000000000
.......................................TTTATGGGGTCGGAGGTGCTTCCTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.091000000001000000000000000000000000000000000000000000000000000000
.................................ATATACTTTATGGGGTCGGAGGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.071000000000001000000000000000000000000000000000000000000000000000
..................................................GGAGGTGCTTCCTTCTGCCTGTTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.071001000000000000000000000000000000000000000000000000000000000000
.......................................TTTATGGGGTCGGAGGTGCTTCCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.061000000000000000000000000000000000100000000000000000000000000000
...........................................TGGGGTCGGAGGTGCTTCCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.051000000010000000000000000000000000000000000000000000000000000000
......................................................GTGCTTCCTTCTGCCTGTTACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................TACATTTGGATTTTGCAC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000100000000000000000000000000
..................................TATACTTTATGGGGTCGGAGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................TTTTAATGGGTTCAGGGTAT---------------------AAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................CATACATTTGGATTTTGCAC-AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000100000000000000000000000
................GATCAAGAATAT-----ATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
..............................................................................CATTTGGATTTTGCAC-AAATACAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................TTGGATTTTGCAC-AAATACAATATACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................CCATTTTTAATGGGTTCAGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................TTAATGGGTTCAGGGTAT---------------------AAAAA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
........................ATAT-----ATATACTTTATGGGGTCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
.........TGATGCTGATCAAGAATAT-----AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
.......ATTGATGCTGATCAAGAATAT-----..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
.....................AGAATAT-----ATATACTTTATGGGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
..........GATGCTGATCAAGAATAT-----ATATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................ATTTGGATTTTGCAC-AAATACAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
........TTGATGCTGATCAAGAATAT-----ATATACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
CTCGGCTGTTGACCCTGATCAAGAATATAC-ATATATACTTTATGGGGTTGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TATCAC-AAAACCATTATACCCTT-----------TGACCCATTTTTAATGGATTCTGGGTATAAAAATGCGATAT--------TATAT----AT------------GTA--------------------TTATC-----------------T------------------------------------------------------------------------------------------------------TTCAAT---------------------------------------------------------------------ATTATCATATTAT-----------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------G-----------T--------------------------------T-----------GGT-----------------G-------------------TCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTCAGCTTCTCATGCTGATCAAGAATTT-----ATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACAT-------CTGACC-AAATTTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAA----TCTTTAGTGAAACA--------------------------------------------AATGTAAC-------------------------------------TAAA-----------------------------------TGAAATGAATAAAT-------------------------------------------------------------------------------------------------TTCAATCTGCCATGATTAACTGAAATTTAAATAGAAAACTATTTACTGCTAGGATCTAGCCCAGGATATGACAA-------------------------------------------------------------------------------------------------------------TTT--TT------------------------------------------------------------------------------------------CCGTTTTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................TCTGTGCGTTACAAACAT-------CTGACC-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25500050
.................................ATATACTTTATGGGGTCGGAAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25505000
...................................................................TGCGTTACAAACAT-------CTGACC-AAATTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.08101000
...................................................................TGCGTTACAAACAT-------CTGACC-AAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
...............................................................TCTGTGCGTTACAAACAT-------CTGACC-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.06101000
.................................................................TGTGCGTTACAAACAT-------CTGACC-AAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...................CAAGAATTT-----ATATACTTTATGGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................ATTT-----ATATACTTTATGGGGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.........................................................TCTCCTTCTGTGCGTTACAAACAT-------CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
dp5
CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCA-----------ATACTCAT----TTTGAGTATCGGGTAT---------------------AAAAA----TT------------GAGTTCAGTTCTCAGACT-------GAA-------------------------------------------------------------------------------------CTTAAAAACAATTGAA-------------TAAATCATCAAAGTCCTCGAATGTACT--TGAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------ATA-----------------CTCGTACAATTT--------GGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................GTCGGAAACGATTCCTTCTGGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25205.10102010200000000
..........................................................TTCCTTCTGGACGTTACACACATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24203.306606600000000
...........................................TAGGGTCGGAAACGATTCCTTCTGGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28202.805605600000000
..........................................................................................................................................GAGTATCGGGTAT---------------------AAAAA----TT------------GAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000020
.................................................CGGAAACGATTCCTTCTGGACGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.753503500000000
...........................................................TCCTTCTGGACGTTACACACATCCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.102202200000000
.........................................................ATTCCTTCTGGACGTTACACACATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.701401400000000
...........................................TAGGGTCGGAAACGATTCCTTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.701401300000010
........................................................................................................................................TTGAGTATCGGGTAT---------------------AAAAA----TT------------GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.5020000000020
............TGCTGATCAAGAATAT-----ATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4080800000000
............................................................CCTTCTGGACGTTACACACATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3570700000000
...........................................TAGGGTCGGAAACGATTCCTTCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.3060040000200
......................................................................................TTTACCAC-AAATCTAATATACCCCA-----------ATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.2550500000000
........................................................GATTCCTTCTGGACGTTACACACATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040400000000
................................................TCGGAAACGATTCCTTCTGGACGTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2040000000040
..................TCAAGAATAT-----ATATACTTTATAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000300
...........................T-----ATATACTTTATAGGGTCGGAAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530300000000
................................................................................TCCACTTTTACCAC-AAATCTAATATACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1530000000300
.........TGATGCTGATCAAGAATAT-----A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000030
...........................................TAGGGTCGGAAACGATTCCTTCTGGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.1530000000030
............TGCTGATCAAGAATAT-----ATATAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020020000000
.......................................................................TTACACACATCCACTTTTACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020002000000
.............................................................................................................................ACTCAT----TTTGAGTATCGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
..................................................................................................................................T----TTTGAGTATCGGGTAT---------------------AAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000001100
..........................................................TTCCTTCTGGACGTTACACACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000200
................GATCAAGAATAT-----ATATACTTTATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
............................................AGGGTCGGAAACGATTCCTTCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
............TGCTGATCAAGAATAT-----ATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000200000
........................................................................................................................................TTGAGTATCGGGTAT---------------------AAAAA----TT------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.0610100000000
...........................................TAGGGTCGGAAACGATTCCTTCTGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010000000
......................................................................................TTTACCAC-AAATCTAATATACCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
...................................ATACTTTATAGGGTCGGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
.................ATCAAGAATAT-----ATATACTTTATAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
.................................ATATACTTTATAGGGTCGGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
................................................TCGGAAACGATTCCTTCTGGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000001000
.......................................................CGATTCCTTCTGGACGTTACACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
............................................................CCTTCTGGACGTTACACACATCCACTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010000000
....GCTATTGATGCTGATCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
........................ATAT-----ATATACTTTATAGGGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................T----TTTGAGTATCGGGTAT---------------------AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.......................................................................................TTACCAC-AAATCTAATATACCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100000
..........................................................TTCCTTCTGGACGTTACACACATCCACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000100000
........................ATAT-----ATATACTTTATAGGGTCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000001
.......................................................................................TTACCAC-AAATCTAATATACCCCA-----------ATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000001000
..................................TATACTTTATAGGGTCGGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..............CTGATCAAGAATAT-----ATATACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
droPer2
CTCGGCTATTGATGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCA-----------ATACTCAT----TTTGAGTATCGGGTAT---------------------AACAA----AT------------ATA--------------------TTAAA-----------------ATTCAATGGTGA------------------------------------------------------------------------------------------------------------TTCT--CG---------------------------------------------------------------AAT------------------------------------------------------------------------------------CCAG-G----------------------------------------TAAGGGCTA---------TGGACGAATCCGACCAGCAATAT------------ATT--TG------------------------------------------------------------------------------------------GCATGGAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................CGATTCCTTCTGGACGTTACACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.85170170000
............TGCTGATCAAGAATAT-----ATATACTTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGCTA---------TGGACGAATCCGACCAGC...........................................................................................................................26200.102200000
..............................................................................................................................CTCAT----TTTGAGTATCGGGTAT---------------------AACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...............TGATCAAGAATAT-----ATATACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................................CCTTCTGGACGTTACACACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droAna3
CTCAGGAGGTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAACAAAG---T------------G----------------------TAAAAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATACCT---------------------------------------------------------------------------------------TT-G----------------------------------------CAGACGGTATTATAACTTT----------GGTCAAAAGCGTGCAACG---------------------------------------------------CAGAGAA-----------GGA-----------------G------------------CCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................CCTTCACTGCGTTGCACACTT-------TTGACC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27202.25450450000
..........................................ATAGGGTCGGAGATGTCTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.55111100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT----------GGTCAAAAGCGTGCAACG---------------------------------------------------.............................................................2180.383000120
.................................ATATACTTTATAGGGTCGGAGATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.306060000
...................................................GAGATGTCTCCTTCACTGCGTTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255500000
.........................................................................................TGACC-AAAATTATAATACCCTC-----------T--------------------------------------GCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.204040000
........................................................GTCTCCTTCACTGCGTTGCACACTT-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153300000
.....................................ACTTTATAGGGTCGGAGATGTCTCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACG---------------------------------------------------CAGAGAA-----------GGA-----------------.......................18200.051000001
.....................AGAATAT-----ATATACTTTATAGGGTCGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
droBip1
CTCAGGAGGTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGGAC-AAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAAAG---G------------AAG----------------------CAATATA-----A-------A--------------------AAAAA--TCCTACGCGTTGTCACTAAACAAAGGTATTTTGAATATACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTTCAG----------AACGACCGGTT---------------------------------------------------------------------------------------------------------------A-----------AGA-----------------GTTGTGTGAGTT----ATGTGTCSizeHit CountTotal NormTotal
No Reads
droKik1
CTCGACTGTTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTG---------------------------------------------------CAAGGGTATAAAAA----GT------------AAG----------------------CA-----------------AA--------------------AAAAA--TCCTACGTGT-GTCGATAGACAAAGGTATTTTGGATATACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTTCAG----------ATCGATCGGTT--GATTT-----------------------------------------------------------G-----------T---------------------------------------------------------------------TCGAGTT----ATGTTTCSizeHit CountTotal NormTotal
No Reads
droFic1
CTCTGCTCGTGATGCTGATCAAGAATAT-----ATATCCTTTATGGGGTCTGAGGTGTCTCCTTCATTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTT-----------T-GCTC------T-----TC---------------------AAGGGTATAAAAA----GC------------TTA--------------------TTA----------------------------------------------------------------------------------------------------------------------GCTGAACAAAGTTCCTTTCTATGCT--AGAGCTGAA-------------------------------------------ATTATTATTATGGATA------------------------------------------------------------------------------------TTGGAGTGGAGA-----------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------TTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTCTACTAGTGATGCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAGACGTCTCCTTCACTGCGTTGCAAACTT-------TTGACT-GAAATTATAATACCCTC-----------T--------------------------------------GCAAGGGTATAAAAA----TT------------A----------------------CTAA-----------------AATATAAC----------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATACCC---------------------------------------------------------------------------------------TT-G----------------------------------------CAGAGGGTATTATAATTTC----------AGTCAGAAGTTTGCAACG---------------------------------------------------CAGTGAA-----------GGA-----------------G------------------ACATSizeHit CountTotal NormTotal
No Reads
droRho1
CTCGGCTAGTCATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGGAAACGCTTCCTTCTACCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTT-----------TTGCTC------TACGAGTAACGGGTAT---------------------ACAAA----TT------------T----------------------TTTA-----------------TATGATAT----------------T------CTA-----------------T---------TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-G----------------------------------------TAAATGCCA------TTTT----------GTTGGAAATTTTGTAACT----------------------------------------------------TGTGAGGAACCGTAAGACGG-----------------CCCTCACAATT-----------TSizeHit CountTotal NormTotal
No Reads
droBia1
CTCGTCTAGTGACGCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGTCTCCTTAACTGCGTCGCAAACTC-------CTGACT-GAAATCATTATACCCTT-----------T--------------------------------------GCAAGGGTATAAAAAAA---C------------A----------------------TAAAAATTA-----TG---------------------------ATTTA--TGATTCATGTTAACATTCGTAAT---------TGATATAATTT--------------------------TGTGTC-------------------------------------------------------------------------------------------ATCA---------------------------------------------------------------------------------------AT--------------------GTGAC----------A----------------------------------------------T--------------------------------------------------------GGT-----------GAG-----------------CTCGTATAATTT-----TGATGTSizeHit CountTotal NormTotal
No Reads
droTak1
CTCGGCTAGTGACCCTGATCAAGAATAT-----ATATACTTTATGGGGTCGGAAACGCTTCTTTCTGGCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTT-----------TTACTC------TACGAGTAACGGGTAT---------------------AAAAA----GT------------AC------CTCCTAAAATAAAATAAAAAATAA-----TT---------------------------ATA--------------------------------T--TTAATTTAT------------------------------AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCAATATT-----------------------------------------------------------------------------------GGA-AAAA---------------------------------------------------CCTCGAA----------GGAA-----------------GCTATGAAATT-----------TSizeHit CountTotal NormTotal
No Reads
droEug1
CTTCGCCATTGATCCTGATCAAGAATAT-----ATATACTTTATAGGGTCGCAAAAGCTTCCTTCTATCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTACTC------TACGAGTAACGGGTAT---------------------AATAA----CA------------A----------------------TAAAAATAA-----TT---------------------------ATA-------TA-----------------C---------AGATATAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAATAAAG----------AAAAAATGGCT--AAAC-TAAGC-------------------------------------------------------------------------------------------------GCA-----------ATG-----------------CCCA-------------TGCAATSizeHit CountTotal NormTotal
No Reads
dm3
CTCAGCTATTGGTTCTGATCAAGAACAT-----ATATACTTTATATAGTCGGAAAGGCTTCCTTCTGCCTGTTACATACTT-------TTCAACTGAATCTACTATTATTTTTTCTCTTTATTTTACTC------TACGAGTAACGGGTAT---------------------AAAAA----TG-------------TA--------------------TTTAC-----------------TTTTTATTTCGGCCAGACAAAAAG---------CCC------GTTTTA-----------------------------------CAAAACGAATAA-------------------------TTCTAACG---------------------------------------------------------------ATT------------------------------------------------------------------------------------TCAA-A-----------------------TCGAA----------A--------------------------------------TC----------------------------------------------------------------------------------------------------GT---------------GAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
CTCGGCTATAGATCCTGATCAAGAATAT-----ATATATTTTATATAGTCGGAAACTCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTACTC------TACGATTAAGGGGTAT---------------------ACAAA----TT------------T------------------------------------------------TATGTTGA------------------------------------------------------------------------------------------------------------TCCT--ATAACGAAAGTTTAATAACACAATATTTAAATTTGTATTAAATCGAAAGTTCA---------------------------------------------------------------------------------------------------------------------------------------T-------TT--------------------GGTTA----------------------------------G-----------T---------------------------------------------------------------------TCAATTT----GTAAAGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................TGCCTGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25204.95990000000031680000000
..........................................................TTCCTTCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22202.605200000012182200000000
...........................................................TCCTTCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.0541000000410000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATTTGTATTAAATCGAAAGT...................................................................................................................................................................................................................................................................................................................2512.00200000000200000000
........................ATAT-----ATATATTTTATATAGTCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2451.80900000017000010000
................................................................CTGCCTGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.6032000000003200000000
................................................................................T-------TTCAAC-GAATCTAGTATACCCTT-----------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.1523000130000000046000
.......ATAGATCCTGATCAAGAATAT-----ATATATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
......................................................................................................................................................T---------------------ACAAA----TT------------T------------------------------------------------TATGTTGA------------------------------------------------------------------------------------------------------------TCCT--ATAACGAA.............................................................................................................................................................................................................................................................................................................................................................2911.00100000000010000000
........................ATAT-----ATATATTTTATATAGTCGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2551.00500000002000030000
......................GAATAT-----ATATATTTTATATAGTCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.80400000001020010000
........................ATAT-----ATATATTTTATATAGTCGGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.80400000000000040000
.................................................................TGCCTGTTACATACTT-------TTCAAC-GAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.701400000077000000000
.TCGGCTATAGATCCTGATCAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.67200000011000000000
CTCGGCTATAGATCCTGATCAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67200000010100000000
................................................................CTGCCTGTTACATACTT-------TTCAAC-GAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.601200000070410000000
........................ATAT-----ATATATTTTATATAGTCGGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.60300000012000000000
................................................................................T-------TTCAAC-GAATCTAGTATACCCTT-----------TTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.601200000003800010000
................................................................CTGCCTGTTACATACTT-------TTCAAC-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.601200000000930000000
....................................TATTTTATATAGTCGGAAACTCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000100000000
.TCGGCTATAGATCCTGATCAAGAATAT-----A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
...............................................................TCTGCCTGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.45900000031050000000
..............................................................TTCTGCCTGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.40800000000070010000
.TCGGCTATAGATCCTGATCAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100000000000010000
.TCGGCTATAGATCCTGATCAAGAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000001000000000
.TCGGCTATAGATCCTGATCAAGAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
.................................................................TGCCTGTTACATACTT-------TTCAAC-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30600000006000000000
.............................................TAGTCGGAAACTCTTCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.29200000000011000000
................................................................................T-------TTCAAC-GAATCTAGTATACCCTT-----------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500050000000000000
....................................................................CTGTTACATACTT-------TTCAAC-GAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500020010002000000
.........................................................................ACATACTT-------TTCAAC-GAATCTAGTATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500000000000041000
........................ATAT-----ATATATTTTATATAGTCGGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.20100000000000001000
...........................................TATAGTCGGAAACTCTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100000010000000000
........................................TTATATAGTCGGAAACTCTTCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17100000010000000000
...........................................TATAGTCGGAAACTCTTCCTTCTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100000000001000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------TTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15300000002010000000
..............................................................TTCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300000030000000000
................................................................................T-------TTCAAC-GAATCTAGTATACCCTT-----------TTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15300000010200000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000010200000000
.......ATAGATCCTGATCAAGAATAT-----ATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000010000000000
........................ATAT-----ATATATTTTATATAGTCGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000000000010000
........................................................TCTTCCTTCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.13100000000100000000
........................ATAT-----ATATATTTTATATAGTCGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100000000000010000
........................ATAT-----ATATATTTTATATAGTCGGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11100000000000010000
.......ATAGATCCTGATCAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.11100000000100000000
.......ATAGATCCTGATCAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1790.11100000010000000000
......................................TTTTATATAGTCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15100.10100000000001000000
.............................................................CTTCTGCCTGTTACATACTT-------TTCAAC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------TTCAAC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.10200000020000000000
...............................................................TCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.10200000002000000000
...........................................................TCCTTCTGCCTGTTACATACTT-------TTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000010010000000
.........................................................................ACATACTT-------TTCAAC-GAATCTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
................................................................................T-------TTCAAC-GAATCTAGTATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
.......................................TTTATATAGTCGGAAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.08110000000000000000
..................................TATATTTTATATAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15190.05100000000001000000
.........................................................................ACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000010000000
...............................................................TCTGCCTGTTACATACTT-------TTCAAC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000001000
.................................................................TGCCTGTTACATACTT-------TTCAAC-GAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
.......................................................................TTACATACTT-------TTCAAC-GAATCTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.........................................................................................TCAAC-GAATCTAGTATACCCTT-----------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000010000000
......................................................................GTTACATACTT-------TTCAAC-GAATCTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100100000000000000
......................................................................GTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000000000
...............................................................................TT-------TTCAAC-GAATCTAGTATACCCTT-----------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000010000000000
...............................................................TCTGCCTGTTACATACTT-------TTCAAC-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000001000
...........ATCCTGATCAAGAATAT-----ATATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100000000000000
............................................................CCTTCTGCCTGTTACATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000000000
................................................................................T-------TTCAAC-GAATCTAGTATACCCTT-----------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
.............................................................CTTCTGCCTGTTACATACTT-------TTCAAC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
....................................................................CTGTTACATACTT-------TTCAAC-GAATCTAGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000001000000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------TTCAAC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.05100000001000000000
..........................................................TTCCTTCTGCCTGTTACATACTT-------TTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000001000
...............................................................TCTGCCTGTTACATACTT-------TTCAAC-GAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000000100000000
....................................................................CTGTTACATACTT-------TTCAAC-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
....................................................................CTGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000010000000
..........................................................TTCCTTCTGCCTGTTACATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
.....................................................................TGTTACATACTT-------TTCAAC-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
............................................................CCTTCTGCCTGTTACATACTT-------TTCAAC-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000000100000000
.............................................................CTTCTGCCTGTTACATACTT-------TTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
...........................................................TCCTTCTGCCTGTTACATACTT-------TTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000010000
........................................................................................TTCAAC-GAATCTAGTATACCCTT-----------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
.....................................................................TGTTACATACTT-------TTCAAC-GAATCTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
droSec2
TTCGACTATTGATCCTGATCAAGAATGT-----ATATACTATATATGGCCGGAAACGATTCATTCTGCCTGCTGCATATTT-------TCCATC-GAATCGGTAATAGTATT-----------A--------------------------------------GCATTCA-----AAA----TT------------T------------------------------------------------TATATTAC---------------------------------------------------------TC--------------------------CTTGTT-------------------------------------------------------------------------------------------ATTT---------------------------------------------------------------------------------------AGAAAATATAG----------TTAAAATG-----------------------------------------------------------------------------------------------------------------AAAAGCAACAAA-AAGCCTTAACATTTATTGTATCAA-------------CAAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTCGGCTATTGGTCCTGATCAAGAATAT-----ATATACTTTATATGGTCGGAAACCCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTT-----------TTAGTC------TACGAGTAACGGGTAT---------------------AAATA----TG------------T----------------------TTTA---------------------------------------------------------------------------------TTTA--------------------------------CATGGACGAT---------------------------------------------------------------------ATCATCATATTT-----------------------------------------------------------------------------------------------AGCAAAAATAAAAAAATATAGAATCATTTTTTAAA--A------------------------------------GTGTGGGCGTGG---------------------------------------------------CAG-------------------------------------------ATTT-------GGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................TATACCCTT-----------TTAGTC------TACGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.25400000000004
..............................................................................................................TT-----------TTAGTC------TACGAGTAACGGGTAT---------------------AAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10100100000000
droEre2
CTCGGCTATTGATCCTGATCAATAATATATTATATAT-----------------------ACTTCTGCCTGTTACACACTT-------TTCAAG-GAATCTAGTATACGCTT-----------TTACTC------TACGAGTAAAGCGTATAAAT-------ATTA-----------------------------GAG-------------------------TTAAGGAAACTTTACACATAGTAT----------------TCATCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAGTTTACAACGTAATGGTTGTTTGATTTTGATCAGTTCTAGCTGGCTTCAATGTTATGTACCTAACAGT-----------AAA-----------------CACAAGT--------------AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................CACTT-------TTCAAG-GAATCTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000010
...............................................................................................GAATCTAGTATACGCTT-----------TTACTC------TACGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.1711000000

Generated: 05/18/2015 at 12:13 AM