ID:

dmo_1323

 Coordinate:

scaffold_6498:815116-815266 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8

Flybase annnotation

CDS [Dmoj\GI14056-cds]; exon [dmoj_GLEANR_14101:15]; intron [Dmoj\GI14056-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATCTATTGAGCCCCAATTACAGCAGCAAACAGCCGCAACAGCAGCAGCAGCACCACCACCACCACCACCACAACCTCCATCATCATCAGCAGCAGCAGCAACCTCAGCAGCATGTAACAAATGCAAGTCTGCCTTCCGATATATCTTATATTGACGAAGATCCACAGCAGCAGCAGCAACGCACTTTGCAAAATGGATCAACATCAACGTCTGACACACATCAATCGCATTTACCATTTACTCATTCATCT
**************************************************************************************************************************......(((((((((((((((...)))))))..)))).......)))).******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
........................................................................................................................................................GACGAAGATCCACAGCAGC................................................................................ 19 0 1 2.00 2 1 1 0
..........................................................................................................................................................CGAAGATCCACAGCAGCAGCAC........................................................................... 22 1 1 1.00 1 0 0 1
...........................................................................................................................................................................AGCAGCAACGCACTTTGCAA............................................................ 20 0 1 1.00 1 0 0 1
.......................................................................................................................................................................................................................ACTCATTAATCGCATTTACC................ 20 2 2 1.00 2 2 0 0
.........................................................................................................................................................................................TTGCAAAATGGATCAACATCAACGTCTGA..................................... 29 0 1 1.00 1 0 1 0
........................................................................................................................................................GACGAAGATCCACAGCAGCAGCAGCAAC....................................................................... 28 0 1 1.00 1 0 1 0
..................................................................................................................................................................................................GGATCAACATCAACGTCTGACACACAT.............................. 27 0 1 1.00 1 1 0 0
.....................................................................................................................................................ATTGACGAAGATCCACAGCAGCAGCAGC.......................................................................... 28 0 1 1.00 1 1 0 0
..............................................................................................................................................................GATCCACAGCAGCAGCAGCAA........................................................................ 21 0 1 1.00 1 0 0 1
..........................................................................................................................................................................................................................CATTAATCGCATTTACCGTT............. 20 2 1 1.00 1 0 1 0
..............................................................................................................................................ATCTTATATTGACGAAGATC......................................................................................... 20 0 1 1.00 1 1 0 0
..........................................................................................................................GCAAGTCTGCCTTCCGATATA............................................................................................................ 21 0 1 1.00 1 0 0 1
...........................................................................................................................................................................AGCAGCAACGCATTTTGCAAAAT......................................................... 23 1 1 1.00 1 0 1 0
........................................................................ACCTCCATCATCATCAGCAGCA............................................................................................................................................................. 22 0 1 1.00 1 1 0 0
.............................................................................................................................................................................CAGCAACGCACTTTGCAAAATGG....................................................... 23 0 1 1.00 1 1 0 0
.................................................................................................................GTAACAAATGCAAGTCTGCCTTCCGATA.............................................................................................................. 28 0 1 1.00 1 1 0 0
..............................................................................................GCAGCAACCTCAGCAGCATGT........................................................................................................................................ 21 0 1 1.00 1 1 0 0
.................................................................................................................................................................................AACGCACTTTGCAAAATGGAT..................................................... 21 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................AACTCATTAATCGCATTTACC................ 21 3 6 0.67 4 3 1 0
.....................................................................................................................................................................................................................AAACTCATTAATCGCATTTACC................ 22 3 3 0.67 2 2 0 0
.....................................................................................................................................................................................................................................TTTGCCATTTGCTCATTCATC. 21 2 2 0.50 1 1 0 0
.........................................................................................................................................................................................................................TCATTAATCGCATTTACCGTT............. 21 3 6 0.17 1 0 1 0
...............................................................................................................................................................ATCCACAGCAGCAGCAGCAAC....................................................................... 21 0 7 0.14 1 1 0 0
................................................................................................................................................................TCCACAGCAGCAGCAGCAAC....................................................................... 20 0 9 0.11 1 0 1 0
.....................................................................................................................................................................................................................AAACTCATTAATCGCATTTAC................. 21 3 11 0.09 1 1 0 0
........................................................................................................................................................GACGAGGATCCCCAGCAG................................................................................. 18 2 13 0.08 1 0 1 0
......................................................ACCACCACCACCACCACAAC................................................................................................................................................................................. 20 0 15 0.07 1 0 0 1
..............................................................................ATCATCATCAGCAGCAGCAGC........................................................................................................................................................ 21 0 20 0.05 1 0 0 1
......................................................................................................................................................................................................................AACTCATTAATCGCATTTAC................. 20 3 20 0.05 1 1 0 0
...........................................................................................................................................................GACGATCCTCAGCAGCAGCC............................................................................ 20 3 20 0.05 1 0 0 1

Anti-sense strand reads

TAGATAACTCGGGGTTAATGTCGTCGTTTGTCGGCGTTGTCGTCGTCGTCGTGGTGGTGGTGGTGGTGGTGTTGGAGGTAGTAGTAGTCGTCGTCGTCGTTGGAGTCGTCGTACATTGTTTACGTTCAGACGGAAGGCTATATAGAATATAACTGCTTCTAGGTGTCGTCGTCGTCGTTGCGTGAAACGTTTTACCTAGTTGTAGTTGCAGACTGTGTGTAGTTAGCGTAAATGGTAAATGAGTAAGTAGA
********************************************************************************......(((((((((((((((...)))))))..)))).......)))).************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V049
head
 V110
male body
...............................................................................................................................................................................................................................TAGCGTAAATGGTAAGTGAGT....... 21 1 1 1.00 1 1 0 0
.........................................................................................................................................................................CGTCGTCGTTGCGTGAAACGT............................................................. 21 0 1 1.00 1 0 1 0
...............................................................................................................................AGACGGAAGGCTATATAGAAT....................................................................................................... 21 0 1 1.00 1 1 0 0
................................................TCGTGGTGGTGGTGGTGGTGGTG.................................................................................................................................................................................... 23 0 17 0.06 1 0 0 1
....................ACGTCGTTTGTCGGGGTCGTCGTC............................................................................................................................................................................................................... 24 3 17 0.06 1 1 0 0
.........CGGGCTTAAAGTCGTCGT................................................................................................................................................................................................................................ 18 2 20 0.05 1 1 0 0
..................................................................................AGTAGTCGTCGTCGTCGT....................................................................................................................................................... 18 0 20 0.05 1 1 0 0
......................................................................................................................................................CACTGCTCCTAGGGGTCGT.................................................................................. 19 3 20 0.05 1 0 0 1
...................................................TGGTGGTGGTGGTGGTGGTG.................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:815066-815316 - dmo_1323 ATCTATTGA-------GCCCCAATTACAGCAGCAAA---------CA---GC------------------CG-----CAACAGC-------AGCAGCAGCAC------------------------CA---------CCACCACCACCACCA------CAAC---CTCCA---------TCATCATC---------------------------------AGCAGCAGCAGC------------------AACCTCAGCAG------------------------------------------------------------------------CATGTAACAAATGCAAG---------TCTGCCTTCCGATATATCTTATATTGACGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAACGC---ACTTTGCAAAATGGATCAACATC------------------------A----------------ACGTCTGACA------CA---CA----------------------------TCAATCGCA----------TTTA-CCATTTACT-----------------CA---TTCAT---CT-
droVir3 scaffold_13052:1728253-1728494 - ATCTGTTGA-------GCCCCAATTACAGCAG----------C--------------------------AAA--------CAGC-------AG------------------------------------------------------------------CAG---CACCA---------CCAAC---ATCAGCAGCCGCCGCATCA------------------GC---A------------------GCAGCAGCAGCAG------------------------------------------------------------------------CATGTTTCTAATGCAAC---------TCTGCCTTCCGATATATCTTACATAGACGAAGATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGCATCGC---AATTTGCAAAACGGAGTCAATTCCTCTGCATCCACAGC----------AAACCTTACACCCCCCTC---------ACAGCA----------------------------------------GCATTTATCATCA-------------------------------CA---CTCAT---CT-
droGri2 scaffold_14592:95517-95779 + ATCTGTTGA-------GCCCCAATTACAGCAG----------CAACGCCAGC-----------------AAA--------CAGC-------AG---------------------------------CA---------CCCGCAGTCGCAGTC------AACG---CAG------AAGCC---AA------CGTCG------CAGCAGC------------AGC---------------------------AAAAGCAGCAG------------------------------------------------------------------------CATTTATCAAACGCAACCCTGTCTCCGCTGCCTGCGGACATATCTTACATTGACGAAGATCCGCAGCAGCA---------GTCGCAGTCA----------------------------------------------------------------------------------CAGCAACAACGC---AATTTAAGAAATGG-----CTGTCCA---------------------------------------------ACT------A----CC-----------------------------------------TCAACACACACAA----ACTCATCCGCTTCACATTCATA---TTCGC---CG-
droWil2 scf2_1100000004943:2014415-2014619 + ACTTGCTGA-------GCCCCAATTACAGCAG----------C--------------------------AAG------------CAG---CAGCA------------------------------------------------------------------GCAACAGTCGCCAGCACAGCCGCATC---------------AGCAGCATCAACAAC---------------------------------------AACAG------------------------------------------------------------------------CA------------------------GTTGCCTTCTGACATATCTTACATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGCAACAGCGC---ACTCTTCACAACGGACGTACTTCCCAAGC------------------------------------------ACC------CA---CA----------------------------TCAAATGCA----------TCTACAT-----CTG------------G---CCCTAATCCC---GG-
dp5 Unknown_singleton_1849:5261-5457 + AGCAACATCTGCAGCAG------CAACAGCAG----------CAACA---AC------------------AG-----AAGCAGC-------AG---------------------------------CA---------ACAGCAGCAGCAGCA------GCAG---GTGCA---------GCAGCAAC---ATCAG------------------CAACAGCAACATCAGCAGCAACAGC---AGCAAAAG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------TCAGCAGCAACA-------------------------------------G---------CAGCAG---------CAGCAG------------CAACAACA-------------------------------------------GCAACAACAGCA----------------A-----------CA---T---CA-----------------------------------------GCAACAACAACAG----CTG-----------------CA---GCCCC---CA-
droPer2 scaffold_2:5826595-5826827 - AGCAGCAGC---------------AACAGCAG----------CAACA---AC------------------AG-----CAACAGC-------AG---------------------------------CA---------ACAGCAGCAACAGCA------ACAG---CAGCA---------ACAGC---AACAGCAG------------------CAGC---AGCAACAACAGCAACAGCAACAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAG------CAGCAAGT--------------------------TTTTGCTGT---------------------------------CAGC---A--GCATTAAAGTAAAAAGTGAAAACACATTAGCAGCAGTAACAGC----------AACAGTTGCAACACCAACA--------------------------------ACAACAACAACTAAT--------------GCAACA-------------------------------CC---AGCAG---CA-
droAna3 scaffold_12943:4413948-4414155 - ATTCGTTGATGTTGCAG------CATCAGCAG----------CAACA---GC------------------AA-----CAGCAGC-------AG---------------------------------CA---------GCAACAGCATCAGCA------GCAG---CAGCA---------ATAGC---AGCAGCAG------------------CAAC---AGCAGCAGCAGCAATAGCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAA------CAGCAATA-------------------GCAGCAT---------CTG---------------------------------CAGCAG----------------------------------------------CAT---------------------------------CTTTAGCTTCAGCATCTGAGGCAGTTGCATTT--------------------TCCATTGCAGCTT----TC------------------------TTAC---CT-
droBip1 scf7180000395553:7706-7918 - AGGCACAGC------AA------CAGCAGC---------------------------------------AGGCACAGCAACAGC-------AG---------------------------------CA---------GGCACAGCAGCCGCA------ACAG---CACCA---------CCCAC---AACAACAA------------------CAAC---AACAACAGCAGCAATCACAACAACATAAG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------ACAGCAGCAACTTCTCCAACAAAA-------------------GCAACAG---------CAGCAG---------------------------CAGCAACA-------------------------------------------GC----------AACATCAGGCCCTGCAACA--------------------------------GCAACATCAAGCCACACCAC----A----G---------CAA----TC------------------------GCAG-CCAC-
droKik1 scf7180000302592:621651-621851 - GCTTCACCA-------GCAGCAGCAACAGC---------------------------------------A-C-----CTTCAG-CAG---CAGCA------------------------------------------GCAGCAGCATCATCAACAGCAGCAG---CAACA---------CCAAC---AGC------------------------------AGCAGCAGCAGCAACACC---A------GCAACAG---------------------------------------------------------------C---------------------------------------------------------------------------------AGCA---------ACATCACCAACA-------------------------------------G---------CAGCAG---------CAG---CAA---------CATCACCA--GC---AATTTGGCCAGCAG--CAGCATCCCC---------------------------------------------ACG------CC---CA----------------------------TCACCTGCA----------CCA--CC----ACT-----------------C-----GCACCATCC-
droFic1 scf7180000452569:28248-28505 - ATTTCATGG------ATCAGCAGCTGCAGCAA----------CAACA---GCAAGCGGCATTTTATATGCAG------------CAG---CAGCA---------------------------------------------GCAGCAGCAACAACAATTGCAC---CTACA---------GCAGCAGC---------------------------------AGCAGCAGCAGC------------------AACACCGGCA---------------------------------------------------------------------------------------------------------------------------------------------GCA---------GTTGCCGCAA------CAGCAAGCGATATTGCCACCTTCCATGTCAGCAA---------CGA------------------------------CAGCAGCAGCTC---AGTTTCCACCAGGTGAACCTTTGCCG----------------------------TTCCACGTCGACA--------------------------------GCGAAAAC--------------------------------AA----ACCCATTAACCAACCAACCACA---AGCAT---CT-
droEle1 scf7180000490967:924356-924612 - ATGTCACGG-------TCACGGCGCACCACAGCCAACAGCAGCAACA---GC------------------AA-----TTGCAGC-------AG---------------------------------CA---------GCAGCAGCACCACCA------ACAC---CATCA---------CCATCACC---ACCAG------------------CAAC---AGCACCACCA------------GCAGCAG---------------------------------------------------------------------CAGCAACAGCAGCACCTACTGTCCAGTGTGAC---------GATCACGCCCAA-CTATCATCCGGCGCAGC--------AG-------------------------------------------------------------------------CAGCAGCAGCAACATCAGCAG------------CAACAACA---------------CCAC----------------------------CAACCG---------ATGCGCA---------GCCAACAGCAGCATCA-----------------------------------------GCAACATCCA---------------------------CA---GACAA---CT-
droRho1 scf7180000780208:20416-20609 - ATCTGCTGA-------GCCCCAATTACGTC---------------------------------------AAG------------CAC---CAACA------------------------------------------------------------------ACAACAGCAACCAAAGCC------------------------ACC------------------AG---C------------------GAAGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGTGCCAT---------GCTGCCGGTGGACATATCTTACATTGACGAAGACCCGCAC----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ATTTTGCACAACGGAATAGCTTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAATATCCACAA----AC------------------------ATAT---CT-
droBia1 scf7180000301495:122398-122591 - ATCTGCTGA-------GCCCCAATTACATC---------------------------------------AAG------------CAC---CATCA------------------------------------------------------------------GCAACAGCAACCAAAACA------------------------ACC------------------AA---C------------------GCAGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGCGCCAT---------GCTACTGTCGGATATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ACTTTGCACAACGGACTAAATTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAATATCCACAA----AC------------------------ATAC---CC-
droTak1 scf7180000415786:56082-56275 - ACCTGCTGA-------GCCCCAATTACATC---------------------------------------AAG------------CAC---CACCA------------------------------------------------------------------GCAACAGCAGCAAAAACA------------------------ACC------------------AC---C------------------GCCGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGCGCCTT---------GCTACCGTCGGACATATCTTACATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ACTGTGCACAACGGACTAACTTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAAAATCCACAA----AC------------------------GTAT---CT-
droEug1 scf7180000409555:90642-90885 + ACACCAGCA-------ACCTCACCAGCC-------------------------------------------G--CATCAGCAGC-------AG---CAGCAA------------------------CACTACCAGCTGCAACAGCAACATCA------ACA------------------GCTGCAGC---------------AGCAGCAGCAACAAC---AACATC---A------------------GCAGACCCAGCAGCAGTTGTTACGTCATCAGCAACGGCAACTGCCCACGCAGACTGCCTACCAGCAACAGC---------------------------------------------------------------------------------AACA---------GCTACACCAACA-------------------------------------A---------CAGCAA---------CAG---CAACATCAG------GAGCAG----------------------------------------------CAG---------------------------------CAGCAGCAACA-----------------------------------------------GCAACTG----AGG-----------------CA---ATCGT---TT-
dm3 chr4:352298-352489 - ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------AC---C------------------GCAGACTCAACTC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GATGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCT---------------------------CA---AACGT---CC-
droSim2 4:286115-286312 - ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------CC---C------------------GCAGACTCAACAC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GCTGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCTCAA----ACT-----------------CA---AACGC---CC-
droSec2 scaffold_30:89686-89883 - ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------CC---C------------------GCATACCCAACAC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GCTGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCTCAA----ACT-----------------CA---AACGC---CC-
droYak3 4:382390-382585 - ATCTACTGA-------AACCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGCAACCAAAACT------------------------ACC------------------AT---C------------------GCAAACTCAACAC------------------------------------------------------------------------AATGTGTCAAGTGCCAT---------GCTGCCGCCGGACATATCTTATATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------CAGCAACAACGT---ACTTTGCACAACGGACTAACTTTCCA---------------------------------------------GCG------CT---CA-----------------------------------------GCAATGCCCTCAG----AC------------------------GACC-CTTC-
droEre2 scaffold_4690:14226344-14226555 + CAATAACAC-------ACC-AAACGGCG------------------------------------------CG------------CAGCAGCAGCAGCAGCAACAACAACAACACCTTCAGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAACGT---------GTTGTTGCCAGCAGCAACCAGCAGCAACAACAACAA-CA---ACAGCTGCAGCAACAGCAGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGCAGCA---------GCATGATAATGGACCAACGTCCCA---------------------------------------------TCA------TT---T-----------------------------------GCA----TCAAT---------------------------------------CAT---CTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATCTATTGA-------GCCCCAATTACAGCAGCAAA---------CA---GC------------------CG-----CAACAGC-------AGCAGCAGCAC------------------------CA---------CCACCACCACCACCA------CAAC---CTCCA---------TCATCATC---------------------------------AGCAGCAGCAGC------------------AACCTCAGCAG------------------------------------------------------------------------CATGTAACAAATGCAAG---------TCTGCCTTCCGATATATCTTATATTGACGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAACGC---ACTTTGCAAAATGGATCAACATC------------------------A----------------ACGTCTGACA------CA---CA----------------------------TCAATCGCA----------TTTA-CCATTTACT-----------------CA---TTCAT---CT-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------C...................................................................................................................................................................................................1912.002100001
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAC..............................................................................................................................................................................................2211.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACGC---ACTTTGCAA............................................................................................................................................................................2011.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAAATGGATCAACATC------------------------A----------------ACGTCTGA.............................................................................................................2911.001000001
................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAAC..........................................................................................................................................................................................2811.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCAACATC------------------------A----------------ACGTCTGACA------CA---CA----------------------------T.................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................ATTGACGAAGATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGC.............................................................................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................GATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAA...........................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................................ATCTTATATTGACGAAGATC...................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................GCAAG---------TCTGCCTTCCGATATA......................................................................................................................................................................................................................................................................................................................................2111.001000010
................................................................................................................................................................AC---CTCCA---------TCATCATC---------------------------------AGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACGC---ACTTTGCAAAATGG.......................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................GTAACAAATGCAAG---------TCTGCCTTCCGATA........................................................................................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................GCAGC------------------AACCTCAGCAG------------------------------------------------------------------------CATGT...........................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGC---ACTTTGCAAAATGGAT.....................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAAC..........................................................................................................................................................................................2170.141100000
........................................................................................................................................................................................................................................................................................................................................................................................................TCCACAG-------------------------------------------------------------------------CAG------------------------------CAGCAGCAAC..........................................................................................................................................................................................2090.111000001
...............................................................................................................................A---------CCACCACCACCACCA------CAAC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.071000010
.........................................................................................................................................................................A---------TCATCATC---------------------------------AGCAGCAGCAGC------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
droVir3
ATCTGTTGA-------GCCCCAATTACAGCAG----------C--------------------------AAA--------CAGC-------AG------------------------------------------------------------------CAG---CACCA---------CCAAC---ATCAGCAGCCGCCGCATCA------------------GC---A------------------GCAGCAGCAGCAG------------------------------------------------------------------------CATGTTTCTAATGCAAC---------TCTGCCTTCCGATATATCTTACATAGACGAAGATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGCATCGC---AATTTGCAAAACGGAGTCAATTCCTCTGCATCCACAGC----------AAACCTTACACCCCCCTC---------ACAGCA----------------------------------------GCATTTATCATCA-------------------------------CA---CTCAT---CT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTACATAGACGAAG......................................................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCCGATATATCTTACATAGACGAAGATC...................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACATAGACGAAGATCCACAG-------------------------------------------------------------------------CAGC.................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGC----------AAACCTTACACCCCC......................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...TGTTGA-------GCCCCAATTACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GTTTCTAATGCAAC---------TCTGCCT...............................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATTCCTCTGCATCCACAGC----------.....................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TAATGCAAC---------TCTGCCTTCC............................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------GCATTTATCATCA-------------------------------CA---CTCA.......2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTACATAGACGAA.......................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATCTTACATAGACGAAGATCCACAG-------------------------------------------------------------------------C....................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAG.................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTTACACCCCCCTC---------ACAGC.....................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTACATAGACGAAGATCC..................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................ACCA---------CCAAC---ATCAGCAGCCGCCGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAAAACGGAGTCAATT...............................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA----------------------------------------GCATTTATCATCA-------------------------------C...............2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GCAGCAGCAG------------------------------------------------------------------------CATGTTTCTAATG...................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGC---AATTTGCAAAACGGAGTC...................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TAATGCAAC---------TCTGCCTTCCGA..........................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCACAGC----------AAACCTTACACCC........................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC----------AAACCTTACACCCCCCT....................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGACGAAGATCCACAG-------------------------------------------------------------------------CAGCA................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGC.............................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AATGCAAC---------TCTGCCTTCCG...........................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTACATAGACGAAGATCCACAG-------------------------------------------------------------------------C....................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TACATAGACGAAGATCCACAG-------------------------------------------------------------------------CAGCA................................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................ATCAGCAGCCGCCGCATCA------------------GC---A------------------GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AG---CACCA---------CCAAC---ATCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..CTGTTGA-------GCCCCAATTACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGTTTCTAATGCAAC---------TCTGCC................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATCCACAGC----------AAACCTT..............................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GATATATCTTACATAGACG.........................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGC................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGC---AATTTGCAAAACGGAGTCAAT................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATTCCTCTGCATCCACAGC----------AAACC................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATTCCTCTGCATCCACAGC----------AAA..................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TATCTTACATAGACGAAGATCCAC................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CCAAC---ATCAGCAGCCGCCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCCACAGC----------AAACCTTAC............................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CGCCGCATCA------------------GC---A------------------GCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGCA............................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
.................................................................................AGC-------AG------------------------------------------------------------------CAG---CACCA---------CCAAC---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................ATCA------------------GC---A------------------GCAGCAGCAGCAG------------------------------------------------------------------------CA..............................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000001100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCA...............................................................................................................................................................................................19120.081000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................TCCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGC.............................................................................................................................................................................................20160.061000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CCACAG-------------------------------------------------------------------------CAGCAG---------------------------CAGCAGCA............................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
droGri2
ATCTGTTGA-------GCCCCAATTACAGCAG----------CAACGCCAGC-----------------AAA--------CAGC-------AG---------------------------------CA---------CCCGCAGTCGCAGTC------AACG---CAG------AAGCC---AA------CGTCG------CAGCAGC------------AGC---------------------------AAAAGCAGCAG------------------------------------------------------------------------CATTTATCAAACGCAACCCTGTCTCCGCTGCCTGCGGACATATCTTACATTGACGAAGATCCGCAGCAGCA---------GTCGCAGTCA----------------------------------------------------------------------------------CAGCAACAACGC---AATTTAAGAAATGG-----CTGTCCA---------------------------------------------ACT------A----CC-----------------------------------------TCAACACACACAA----ACTCATCCGCTTCACATTCATA---TTCGC---CG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGG-----CTGTCCA---------------------------------------------ACT------A----CC-----------------------------------------TCAACA...............................................2411.00110
..............................................................................................................................................................................................................................................................GCAGCAG------------------------------------------------------------------------CATTTATCAAACGCA.................................................................................................................................................................................................................................................................................................................................................................2211.00110
................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGATCCGCAGCAGCA---------GTC.............................................................................................................................................................................................................................................................................................2311.00101
.................................................................................................................................................................................................................................................................................................................................................TATCAAACGCAACCCTGTCTC.......................................................................................................................................................................................................................................................................................................................................................2111.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATGG-----CTGTCCA---------------------------------------------ACT------A----CC-----------------------------------------TCA..................................................2411.00110
.........................................................................................................................................................................................................................................................................................................................................................................................TTACATTGACGAAGATCCGCA...............................................................................................................................................................................................................................................................................................................2111.00101
droWil2
ACTTGCTGA-------GCCCCAATTACAGCAG----------C--------------------------AAG------------CAG---CAGCA------------------------------------------------------------------GCAACAGTCGCCAGCACAGCCGCATC---------------AGCAGCATCAACAAC---------------------------------------AACAG------------------------------------------------------------------------CA------------------------GTTGCCTTCTGACATATCTTACATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGCAACAGCGC---ACTCTTCACAACGGACGTACTTCCCAAGC------------------------------------------ACC------CA---CA----------------------------TCAAATGCA----------TCTACAT-----CTG------------G---CCCTAATCCC---GG-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGGACGTACTTCCCAAGC------------------------------------------ACC------CA---C...............................................................................................2813.00330000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGGACGTACTTCCCAAGC------------------------------------------ACC------C....................................................................................................2613.00330000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAACGGACGTACTTCCCAAGC------------------------------------------ACC------C....................................................................................................2912.00220000
...........................................................................................................................................................................................................................................................................................................................................................................................ACATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2411.00101000
.....................AATTACAGCAG----------C--------------------------AAG------------CAG---CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACGTACTTCCCAAGC------------------------------------------ACC------C....................................................................................................2511.00110000
...............................................................................................................................................................................CACAGCCGCATC---------------AGCAGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAAGC------------------------------------------ACC------CA---CA----------------------------TCAAATGCA----------TC.............................................2711.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................TTACATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGCA...............................................................................................................................................................................................2711.00100100
.....................AATTACAGCAG----------C--------------------------AAG------------CAG---C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACGTACTTCCCAAGC------------------------------------------ACC------CA---CG----------------------------..................................................................2811.00110000
..............................................................................................A------------------------------------------------------------------GCAACAGTCGCCAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACGGACGTACTTCCCAAGC------------------------------------------ACC------C....................................................................................................2711.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGACGTACTTCCCAAGC------------------------------------------ACC------CA---................................................................................................2411.00110000
.....................................................................AAG------------CAG---CAGCA------------------------------------------------------------------GCAACAGTCGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................................................................................................................................CATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------C...................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................ATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2211.00100100
.......GA-------GCCCCAATTACAGCAG----------C--------------------------AAG------------CAG---C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGACGTACTTCCCAAGC------------------------------------------ACC------CC---................................................................................................2411.00110000
...........................................................................................AGCA------------------------------------------------------------------GCAACAGTCGCCAGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................................................................................................................................................................CAACAGTCGCCAGCACAGCCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACGTACTTCCCAAGC------------------------------------------..............................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCA----------TCTACAT-----CTG------------G---CCCTAATCCC---GG-2711.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAT-----CTG------------G---CCCTAATCCC---...2011.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGC---ACTCTTCACAACGGACGT...................................................................................................................................................................2611.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................TACATTGACGAAGATCCCCAG----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGACGTACTTCCCAAGC------------------------------------------ACC------C....................................................................................................2311.00110000
.....................................................................................................................................................................CAGTCGCCAGCACAGCCGCATC---------------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGC---ACTCTTCACAAC.........................................................................................................................................................................2011.00100010
.......................................................................G------------CAG---CAGCA------------------------------------------------------------------GCAACAGTCGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100010
..........................................................................................................................................................................................................AGCAGCATCAACAAC---------------------------------------AACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
dp5
AGCAACATCTGCAGCAG------CAACAGCAG----------CAACA---AC------------------AG-----AAGCAGC-------AG---------------------------------CA---------ACAGCAGCAGCAGCA------GCAG---GTGCA---------GCAGCAAC---ATCAG------------------CAACAGCAACATCAGCAGCAACAGC---AGCAAAAG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------TCAGCAGCAACA-------------------------------------G---------CAGCAG---------CAGCAG------------CAACAACA-------------------------------------------GCAACAACAGCA----------------A-----------CA---T---CA-----------------------------------------GCAACAACAACAG----CTG-----------------CA---GCCCC---CA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA-------------------------------------G---------CAGCAG---------CAGC..................................................................................................................................................................................................................20200.501001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------A-----------CA---T---CA-----------------------------------------GCAACAACAACAG----C...................................2130.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---T---CA-----------------------------------------GCAACAACAACAG----C...................................1960.1710010000000
..........................................CAACA---AC------------------AG-----AAGCAGC-------AG---------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------CAGCAG------------CAACAACA-------------------------------------------GCA..............................................................................................................................................22200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------CAGCAG------------CAACAACA-------------------------------------------GCA..............................................................................................................................................21200.1020100100000
..............................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------------------------------AACA---------TCAGCAGCAACA-------------------------------------G---------CAGC.................................................................................................................................................................................................................................22110.0910010000000
...........................................................................................................................................................................................................................CAACATCAGCAGCAACAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0910010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................A---------TCAGCAGCAACA-------------------------------------G---------CAGCAG---------CAGC..................................................................................................................................................................................................................24140.0710000100000
..................................................................................GC-------AG---------------------------------CA---------ACAGCAGCAGCAGCA------GCAG---G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.0710100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CA---------TCAGCAGCAACA-------------------------------------G---------CAGC.................................................................................................................................................................................................................................19200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA-------------------------------------G---------CAGCAG---------CA....................................................................................................................................................................................................................20200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA-------------------------------------G---------CAGCAG---------CAGCA.................................................................................................................................................................................................................23200.0510001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------G---------CAGCAG---------CAGCAG------------CAACAACA-------------------------------------------.................................................................................................................................................22200.0510000100000
...............................................................................................................................A---------ACAGCAGCAGCAGCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA-------------------------------------G---------CAGCAG---------CAGCAG------------....................................................................................................................................................................................................23200.0510100000000
............AGCAG------CAACAGCAG----------CAACA---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAACAACA-------------------------------------------GCAACAACAGCA----------------A-----------C........................................................................................................23200.0510100000000
..................................................................................GC-------AG---------------------------------CA---------ACAGCAGCAGCAGCA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..........GCAGCAG------CAACAGCAG----------CAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
.............................................................................................................................................CAGCAGCAGCA------GCAG---GTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------------------------G---------CAGCAG---------CAGCAG------------CAACA...............................................................................................................................................................................................20200.0510000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------------G---------CAGCAG---------CAGCAG------------....................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------CAGCAG------------CAACAACA-------------------------------------------GCAA.............................................................................................................................................23200.0510000100000
...............................................................................GCAGC-------AG---------------------------------CA---------ACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
..............................................................................................................................................................................................................................CATCAGCAGCAACAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------G---------CAGCAG---------CAGCAG------------CAACA...............................................................................................................................................................................................19200.0510000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------CAACAACA-------------------------------------------GCAACAACAG.......................................................................................................................................22200.0510100000000
...................................................................................C-------AG---------------------------------CA---------ACAGCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
AGCAGCAGC---------------AACAGCAG----------CAACA---AC------------------AG-----CAACAGC-------AG---------------------------------CA---------ACAGCAGCAACAGCA------ACAG---CAGCA---------ACAGC---AACAGCAG------------------CAGC---AGCAACAACAGCAACAGCAACAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAG------CAGCAAGT--------------------------TTTTGCTGT---------------------------------CAGC---A--GCATTAAAGTAAAAAGTGAAAACACATTAGCAGCAGTAACAGC----------AACAGTTGCAACACCAACA--------------------------------ACAACAACAACTAAT--------------GCAACA-------------------------------CC---AGCAG---CA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................AACAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAG------CA..............................................................................................................................................................................................................................................................................25150.071001000
...............................................................................................................................................................................................................................................ACAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAG------CA..............................................................................................................................................................................................................................................................................24190.051010000
................................................................................................................................................................................................................................................CAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAG------................................................................................................................................................................................................................................................................................21200.051001000
..............................................................................................................................................................................................................................................AACAAC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGC........................................................................................................................................................................................................................................................................................21200.051001000
......................................................................................................................................................................................GC---AACAGCAG------------------CAGC---AGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
droAna3
ATTCGTTGATGTTGCAG------CATCAGCAG----------CAACA---GC------------------AA-----CAGCAGC-------AG---------------------------------CA---------GCAACAGCATCAGCA------GCAG---CAGCA---------ATAGC---AGCAGCAG------------------CAAC---AGCAGCAGCAGCAATAGCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAA------CAGCAATA-------------------GCAGCAT---------CTG---------------------------------CAGCAG----------------------------------------------CAT---------------------------------CTTTAGCTTCAGCATCTGAGGCAGTTGCATTT--------------------TCCATTGCAGCTT----TC------------------------TTAC---CT-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................GCAATAGCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AAC..........................................................................................................................................................................................................................................................................................................2030.331010000
................G------CATCAGCAG----------CAACA---GC------------------AA-----CAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
.......................................................................................................................................................................GCA---------ATAGC---AGCAGCAG------------------CAAC---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331010000
.........................................................................................................................................................................A---------ATAGC---AGCAGCAG------------------CAAC---AGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251010000
........................................................................................................................................................................................................................................AATAGCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGC...........................................................................................................................................................................................................................................................................................2440.251010000
.........................TCAGCAG----------CAACA---GC------------------AA-----CAGCAGC-------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
..............................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------------------------------AACA---------GCAGCAGCAA------CAGCAAT.........................................................................................................................................................................................................................................................................2250.201000001
..............................................A---GC------------------AA-----CAGCAGC-------AG---------------------------------CA---------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153000003
.........................................................................................................................................GCAACAGCATCAGCA------GCAG---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000010
......................................................................................................................................................................AGCA---------ATAGC---AGCAGCAG------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.081010000
..............................................................................AGCAGC-------AG---------------------------------CA---------GCAACAGCATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.081000001
.....................................................................................................................................................................................................................................AGCAATAGCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................18120.081010000
..........................................................................................................................................CAACAGCATCAGCA------GCAG---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061010000
...........................................................................................................................................AACAGCATCAGCA------GCAG---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.061010000
...........................................AACA---GC------------------AA-----CAGCAGC-------AG---------------------------------CA---------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
..................................................................................................................................................................................................................................................GC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAA------CAGC............................................................................................................................................................................................................................................................................23200.051010000
......................................................................................................................................................................................GC---AGCAGCAG------------------CAAC---AGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
............................................................................................................................................................................................................................................GCAGCAGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGC...........................................................................................................................................................................................................................................................................................20200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------GCAGCAGCAA------CAGCA...........................................................................................................................................................................................................................................................................19200.051000001
.................................................................................................................................................................................................................................................AGC---AG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------GCAGCAGCAA------................................................................................................................................................................................................................................................................................20200.051010000
............................GCAG----------CAACA---GC------------------AA-----CAGCAGC-------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..............................................A---GC------------------AA-----CAGCAGC-------AG---------------------------------CA---------GCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
droBip1
AGGCACAGC------AA------CAGCAGC---------------------------------------AGGCACAGCAACAGC-------AG---------------------------------CA---------GGCACAGCAGCCGCA------ACAG---CACCA---------CCCAC---AACAACAA------------------CAAC---AACAACAGCAGCAATCACAACAACATAAG---------------------------------------------------------------------C---------------------------------------------------------------------------------AACA---------ACAGCAGCAACTTCTCCAACAAAA-------------------GCAACAG---------CAGCAG---------------------------CAGCAACA-------------------------------------------GC----------AACATCAGGCCCTGCAACA--------------------------------GCAACATCAAGCCACACCAC----A----G---------CAA----TC------------------------GCAG-CCAC-SizeHit CountTotal NormTotal
No Reads
droKik1
GCTTCACCA-------GCAGCAGCAACAGC---------------------------------------A-C-----CTTCAG-CAG---CAGCA------------------------------------------GCAGCAGCATCATCAACAGCAGCAG---CAACA---------CCAAC---AGC------------------------------AGCAGCAGCAGCAACACC---A------GCAACAG---------------------------------------------------------------C---------------------------------------------------------------------------------AGCA---------ACATCACCAACA-------------------------------------G---------CAGCAG---------CAG---CAA---------CATCACCA--GC---AATTTGGCCAGCAG--CAGCATCCCC---------------------------------------------ACG------CC---CA----------------------------TCACCTGCA----------CCA--CC----ACT-----------------C-----GCACCATCC-SizeHit CountTotal NormTotal
No Reads
droFic1
ATTTCATGG------ATCAGCAGCTGCAGCAA----------CAACA---GCAAGCGGCATTTTATATGCAG------------CAG---CAGCA---------------------------------------------GCAGCAGCAACAACAATTGCAC---CTACA---------GCAGCAGC---------------------------------AGCAGCAGCAGC------------------AACACCGGCA---------------------------------------------------------------------------------------------------------------------------------------------GCA---------GTTGCCGCAA------CAGCAAGCGATATTGCCACCTTCCATGTCAGCAA---------CGA------------------------------CAGCAGCAGCTC---AGTTTCCACCAGGTGAACCTTTGCCG----------------------------TTCCACGTCGACA--------------------------------GCGAAAAC--------------------------------AA----ACCCATTAACCAACCAACCACA---AGCAT---CT-SizeHit CountTotal NormTotal
No Reads
droEle1
ATGTCACGG-------TCACGGCGCACCACAGCCAACAGCAGCAACA---GC------------------AA-----TTGCAGC-------AG---------------------------------CA---------GCAGCAGCACCACCA------ACAC---CATCA---------CCATCACC---ACCAG------------------CAAC---AGCACCACCA------------GCAGCAG---------------------------------------------------------------------CAGCAACAGCAGCACCTACTGTCCAGTGTGAC---------GATCACGCCCAA-CTATCATCCGGCGCAGC--------AG-------------------------------------------------------------------------CAGCAGCAGCAACATCAGCAG------------CAACAACA---------------CCAC----------------------------CAACCG---------ATGCGCA---------GCCAACAGCAGCATCA-----------------------------------------GCAACATCCA---------------------------CA---GACAA---CT-SizeHit CountTotal NormTotal
No Reads
droRho1
ATCTGCTGA-------GCCCCAATTACGTC---------------------------------------AAG------------CAC---CAACA------------------------------------------------------------------ACAACAGCAACCAAAGCC------------------------ACC------------------AG---C------------------GAAGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGTGCCAT---------GCTGCCGGTGGACATATCTTACATTGACGAAGACCCGCAC----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ATTTTGCACAACGGAATAGCTTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAATATCCACAA----AC------------------------ATAT---CT-SizeHit CountTotal NormTotal
No Reads
droBia1
ATCTGCTGA-------GCCCCAATTACATC---------------------------------------AAG------------CAC---CATCA------------------------------------------------------------------GCAACAGCAACCAAAACA------------------------ACC------------------AA---C------------------GCAGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGCGCCAT---------GCTACTGTCGGATATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ACTTTGCACAACGGACTAAATTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAATATCCACAA----AC------------------------ATAC---CC-SizeHit CountTotal NormTotal
No Reads
droTak1
ACCTGCTGA-------GCCCCAATTACATC---------------------------------------AAG------------CAC---CACCA------------------------------------------------------------------GCAACAGCAGCAAAAACA------------------------ACC------------------AC---C------------------GCCGCCTCAACAG------------------------------------------------------------------------AACGTGTCAAGCGCCTT---------GCTACCGTCGGACATATCTTACATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCATCAGCGT---ACTGTGCACAACGGACTAACTTCCCA---------------------------------------------ACA------CC---CA-----------------------------------------TCAAAATCCACAA----AC------------------------GTAT---CT-SizeHit CountTotal NormTotal
No Reads
droEug1
ACACCAGCA-------ACCTCACCAGCC-------------------------------------------G--CATCAGCAGC-------AG---CAGCAA------------------------CACTACCAGCTGCAACAGCAACATCA------ACA------------------GCTGCAGC---------------AGCAGCAGCAACAAC---AACATC---A------------------GCAGACCCAGCAGCAGTTGTTACGTCATCAGCAACGGCAACTGCCCACGCAGACTGCCTACCAGCAACAGC---------------------------------------------------------------------------------AACA---------GCTACACCAACA-------------------------------------A---------CAGCAA---------CAG---CAACATCAG------GAGCAG----------------------------------------------CAG---------------------------------CAGCAGCAACA-----------------------------------------------GCAACTG----AGG-----------------CA---ATCGT---TT-SizeHit CountTotal NormTotal
No Reads
dm3
ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------AC---C------------------GCAGACTCAACTC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GATGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCT---------------------------CA---AACGT---CC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------CC---C------------------GCAGACTCAACAC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GCTGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCTCAA----ACT-----------------CA---AACGC---CC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2317.00704300000000000000
.....................................................................................................................................................................................................................................C------------------GCAGACTCAACAC------------------------------------------------------------------------AACGTGT.........................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2612.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGT---ACTTTACACAACGGACT....................................................................................................................................................................2512.00201010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2812.00201100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2512.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGT---ACTTTACACAACGGACT....................................................................................................................................................................2112.00220000000000000000
..CTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................AAGTGGCAT---------GCTGTCGCCGGACATAT.....................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
.....................................................................................................................................................................................................................................................................................................................................................AAGTGGCAT---------GCTGTCGCCGGACATA......................................................................................................................................................................................................................................................................................................................................2512.00200000000000002000
......................................................................................................................................................................................................................................................................................................................................................AGTGGCAT---------GCTGTCGCCGGACATAT.....................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................TGGCAT---------GCTGTCGCCGGACATATCT...................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACACAACGGACTAACTT...............................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................CGTGTCAAGTGGCAT---------GCTGTCGCCG............................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
....ACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...TACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGT---ACTTTACACAACGGACT....................................................................................................................................................................2211.00100100000000000000
............................................................................................................................................................................................................CC------------------CC---C------------------GCAGACTCAACAC------------------------------------------------------------------------AAC.............................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
......................................................................................................................................................................AGGAACCAAAACT------------------------ACC------------------CC---C------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCA...............................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGT---ACTTTACACAACGGACTAACT................................................................................................................................................................2611.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCA..................................................2511.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGC..........................................................................................................................................................................................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAACGGACTAACTTCCCA---------------------------------------------GC............................................................................................................2411.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---ACTTTACACAACGGACTAACT................................................................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGGACTAACTTCCC............................................................................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................AGTGGCAT---------GCTGTCGCCGGACAT.......................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................TGGCAT---------GCTGTCGCCGGACAT.......................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..................................................................................................................................................................................T------------------------ACC------------------CC---C------------------GCAGACTCAACAC------------------------------------------------------------------------AACGTG..........................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................AACGTGTCAAGTGGCAT---------GCTGTCGC..............................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2111.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCGT---ACTTTACACAACGGAC.....................................................................................................................................................................2811.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................T---------GCTGTCGCCGGACATATCTTATATT.............................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GC....................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCG.........................................................................................................................................................................................2811.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................TGGCAT---------GCTGTCGCCGGACATAA.....................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2211.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACTAACTTCCCA---------------------------------------------GCG------CG---................................................................................................2311.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAA..........................................................................................................................................................................2811.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTACACAACGGACTAACT................................................................................................................................................................2111.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACAACGGACTAACTTCC.............................................................................................................................................................2111.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCGT---ACTTTACACAACGGACC....................................................................................................................................................................2611.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................TGTCAAGTGGCAT---------GCTGTCGCCGGA..........................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---ACTTTACACAACGGAC.....................................................................................................................................................................1811.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCG.........................................................................................................................................................................................2711.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGT---ACTTTACACAACGGACTAAC.................................................................................................................................................................2811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................GTGTCAAGTGGCAT---------GCTGTCGCCGGAC.........................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GG....................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACTAACTTCCCA---------------------------------------------GC............................................................................................................2011.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAACGGACTAACTTCCCA---------------------------------------------GCG------C....................................................................................................2511.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAAC.............................................................................................................................................................................................2211.00100000000001000000
..........................................................................................................................................................................ACCAAAACT------------------------ACC------------------CC---C------------------GCAGACTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
.....................AATTACATC---------------------------------------AAG------------CAC---CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2411.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---ACTTTACACAACGGACTAAC.................................................................................................................................................................2111.00101000000000000000
.......................TTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
............................................................................................GCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................CGTGTCAAGTGGCAT---------GCTGTCGCC.............................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................CGTGTCAAGTGGCAT---------GCTGTCGCCGGA..........................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGT---ACTTTACACAACGGACTAACTT...............................................................................................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---ACTTTACACAACGGACTAACTTCCC............................................................................................................................................................2711.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAAC.............................................................................................................................................................................................2811.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACGGACTAACTTCCCA---------------------------------------------GC............................................................................................................2211.00101000000000000000
....................................................................................CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..........................................................................................................................................................................................................................................................AGACTCAACAC------------------------------------------------------------------------AACGTGTCAAGTGGCA................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................TATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACA............................................................................................................................................................................................2711.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------C....................................................................................................2811.00100000001000000000
...................................................................................................................................................................AACAGGAACCAAAACT------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
droSec2
ATCTACTGA-------ACCCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGGAACCAAAACT------------------------ACC------------------CC---C------------------GCATACCCAACAC------------------------------------------------------------------------AACGTGTCAAGTGGCAT---------GCTGTCGCCGGACATATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGCGT---ACTTTACACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TCAATGCCCTCAA----ACT-----------------CA---AACGC---CC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------TCAATGCCCTCAA----ACT-----------------CA---...........2011.0011000
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTATATTGACGAAG......................................................................................................................................................................................................................................................................................................................1911.0011000
.....CTGA-------ACCCCAATTACATC---------------------------------------AAG------------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................ATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGCAACAGC..........................................................................................................................................................................................2811.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTCCCA---------------------------------------------GCG------CT---CA-----------------------------------------TC...................................................1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................GTGGCAT---------GCTGTCGCCGGA..........................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................ATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------C...................................................................................................................................................................................................2111.0010010
...TACTGA-------ACCCCAATTACATC---------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................CTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2711.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................TATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2511.0010100
.........................ACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGT---ACTTTACACAACGGA......................................................................................................................................................................2311.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGT---ACTTTACACAACGGA......................................................................................................................................................................1811.0010010
....................................................................................................................................................................ACAGGAACCAAAACT------------------------ACC------------------CC---C------------------GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACTAACTTCCCA---------------------------------------------GCG------CT---C...............................................................................................2411.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGGACTAACTTCCCA---------------------------------------------GCG------CT---................................................................................................2411.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCGT---ACTTTACACA...........................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................ATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAG.................................................................................................................................................................................................2311.0010010
......................................................................................................................................................................................................................................................................................................................................................................................ATCTTATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2911.0010100
.......................................................................................................................................................................................................................................................................................................................................................GTGGCAT---------GCTGTCGCCGGACATAT.....................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCGT---ACTTTACAC............................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................ATATTGACGAAGACCCGCAA----------------------------------------------------------------------------------------------------------CA..................................................................................................................................................................................................2211.0010010
droYak3
ATCTACTGA-------AACCCAATTACATC---------------------------------------AAG------------CAC---CAGCA------------------------------------------------------------------ACAACAGCAACCAAAACT------------------------ACC------------------AT---C------------------GCAAACTCAACAC------------------------------------------------------------------------AATGTGTCAAGTGCCAT---------GCTGCCGCCGGACATATCTTATATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------CAGCAACAACGT---ACTTTGCACAACGGACTAACTTTCCA---------------------------------------------GCG------CT---CA-----------------------------------------GCAATGCCCTCAG----AC------------------------GACC-CTTC-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................ATGTGTCAAGTGCCAT---------GCTGCCGCCGGACA........................................................................................................................................................................................................................................................................................................................................30113.0013000000000013
.................ACCCAATTACATC---------------------------------------AAG------------CAC---C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................AACCAAAACT------------------------ACC------------------AT---C------------------GCAAACTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................TATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------C...................................................................................................................................................................................................2011.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TATATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------C...................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................CAAGTGCCAT---------GCTGCCGCC.............................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------CAGCAACAAC..........................................................................................................................................................................................2511.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................GTGCCAT---------GCTGCCGCCGGAC.........................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................AT---C------------------GCAAACTCAACAC------------------------------------------------------------------------AATGTGTCA.......................................................................................................................................................................................................................................................................................................................................................................2511.00100001000000
..................................................................................................................................................................................T------------------------ACC------------------AT---C------------------GCAAACTCAACAC------------------------------------------------------------------------AAT.............................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000
........................................................................................................................................................................................................................................................................................................................................................................................CTTATATTGACGAAGACCCGCA...............................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACGT---ACTTTGCACAACGGACT....................................................................................................................................................................2611.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGACTAACTTTCCA---------------------------------------------GCG------CT---CA-----------------------------------------GC...................................................2711.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTATATTGACGAAGACC...................................................................................................................................................................................................................................................................................................................2211.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................ATATCTTATATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------CA..................................................................................................................................................................................................2911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGT---ACTTTGCACAACGGACTA...................................................................................................................................................................2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGACTAACTTTCCA---------------------------------------------GCG------CT---CA-----------------------------------------GC...................................................2611.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGACTAACTTTCCA---------------------------------------------GCG------CC---................................................................................................2211.00100100000000
...TACTGA-------AACCCAATTACATC---------------------------------------AAG------------CAC---C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATCTTATATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------C...................................................................................................................................................................................................2611.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................GCCGCCGGACATATCTTATATTGACG.........................................................................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................................................................................................................................................................................................................................GTCAAGTGCCAT---------GCTGCCGCCGGA..........................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...........................................................................................................................................................................................................ACC------------------AT---C------------------GCAAACTCAACAC------------------------------------------------------------------------AATGTGT.........................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................ATGTGTCAAGTGCCAT---------GCTGCCGCCGGACG........................................................................................................................................................................................................................................................................................................................................3011.00100000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGT---ACTTTGCACAACGGA......................................................................................................................................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACGT---ACTTTGCACAACGGACC....................................................................................................................................................................2811.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAACTTTCCA---------------------------------------------GCG------CT---CA-----------------------------------------GCA..................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACGT---ACTTTGCACAACG........................................................................................................................................................................2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................CAAGTGCCAT---------GCTGCCGCCGGAC.........................................................................................................................................................................................................................................................................................................................................2311.00100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACGT---ACTTTGCACAACG........................................................................................................................................................................2311.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................TATTGACGAAGACCCGCAG----------------------------------------------------------------------------------------------------------CAGC................................................................................................................................................................................................2311.00100000010000
droEre2
CAATAACAC-------ACC-AAACGGCG------------------------------------------CG------------CAGCAGCAGCAGCAGCAACAACAACAACACCTTCAGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAACGT---------GTTGTTGCCAGCAGCAACCAGCAGCAACAACAACAA-CA---ACAGCTGCAGCAACAGCAGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGCAGCA---------GCATGATAATGGACCAACGTCCCA---------------------------------------------TCA------TT---T-----------------------------------GCA----TCAAT---------------------------------------CAT---CTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAACGT---------GTT...................................................................................................................................................................................................................................................................................................................................................2012.0020000020
................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAA-CA---ACAGCTGCAGCAACA.............................................................................................................................................................................................................................................................................................2812.0020200000
................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAACGT---------GTTGT.................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................CAACAACACCTTCAGCAGCAGCA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------GCATGATAATGGACCAACGTCC.............................................................................................................................................................2511.0010000100
.AATAACAC-------ACC-AAACGGCG------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................................................................................................ACAACAACACCTTCAGCAGCAGCA---------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.............................................................................................................AACACCTTCAGCAGCAGCA---------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAACGT---------GTTGTT................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------GCATGATAATGGACCAACGT...............................................................................................................................................................2311.0010000100
.........................................................................................................................................GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAACGT---------GT....................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAACGT---------GTTGTT................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................GCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................24200.55118000210
.............................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAA-CA---ACAGCT......................................................................................................................................................................................................................................................................................................2220.5010000010
.....................................................................................................................................................................................................................................................................................................................................................................................CAACCAGCAGCAACAACA......................................................................................................................................................................................................................................................................................................................1840.2510000010
..........................................................................................................................GCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCA......................................................................................................................................................................................................................................................................................................................................................................18200.1530000030
......................................................................................................................AGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................25200.1531000020
..................................................................................................................CTTCAGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.............................................................................................................................................................................................................................................................................................................................................................................19160.1320010010
..........................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAA-CA---ACAGC.......................................................................................................................................................................................................................................................................................................2490.1110001000
..........................................................................................................................GCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................21200.1022000000
.......................................................................................................................GCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................23200.1020200000
......................................................................................................................AGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCA......................................................................................................................................................................................................................................................................................................................................................................22200.1020000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCA..................................................................................................................................................................................................21200.1021000100
.....................................................................................................................CAGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCA......................................................................................................................................................................................................................................................................................................................................................................23200.1020000200
......................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGC................................................................................................................................................................................................20200.0510001000
.........................................................................................................................AGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................22200.0510000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGCA...............................................................................................................................................................................................25200.0510000010
......................................................................................................................AGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGC.......................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGC...................................................................................................................................................................................................21200.0511000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGCAG..............................................................................................................................................................................................23200.0510100000
.............................................................................................................................GCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAA-------------------------------------------------CAA------------CAGCAG------CA........................................................................................................................................................................................................23200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA-------------------------------------------------CAA------------CAGCAG------CA........................................................................................................................................................................................................19200.0510010000
.......................................................................................................................GCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGC.......................................................................................................................................................................................................................................................................................................................................................................20200.0510000100
............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAA-------------------------------------------------CAA------------CAGCA.................................................................................................................................................................................................................19200.0510000010
........................................................................................................................CAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAA-CA---AC..........................................................................................................................................................................................................................................................................................................21200.0510000010
......................................................................................................................AGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCA.........................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAA-------------------------------------------------CAA------------CAGC..................................................................................................................................................................................................................19200.0510001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAA-------------------------------------------------CAA------------CAGC..................................................................................................................................................................................................................21200.0510100000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAGC................................................................................................................................................................................................26200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA-------------------------------------------------CAA------------CAGCAG------CAGCAGCAG.................................................................................................................................................................................................25200.0510000010
........................................................................................................................CAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
......................................................................................................................AGCAGCAGCA---------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAG........................................................................................................................................................................................................................................................................................................................................................................20200.0510001000

Generated: 05/18/2015 at 12:10 AM