ID:

dmo_1313

 Coordinate:

scaffold_6498:598040-598190 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.0 -1.9 -1.8 -1.7

Flybase annnotation

exon [dmoj_GLEANR_14162:29]; CDS [Dmoj\GI14082-cds]; intron [Dmoj\GI14082-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACAGATCGAAAATACATCGAACAGCCCATCAAACCGGCTCCTCCACCGATTATAGCCACACGCCAATTCACGTCGTCAAATATTTCCAGCAGTTCACATCAGTCATCAAGCTCGACATCGACGGCGGACGTTAAGGTGAGAGTAGAAGGACATAATTGATTCAAAAAGGGGTCTAATTGATTGGTAACTGTTTCTTTTAGATGGTCACCAACAGCAACTCGACAACAAGCACAAGTTCCTCATCGACACA
****************************************************....................((.........................................))************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V049
head
............................................................................................GTTCACATCAGTCATCAAGCTCGAC...................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
................ATCGAACAGCCCATCAAACCGGCTCCTC............................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
....................................................ATAGCCACACGCCAATTCAC................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................AACTCGACAACAAGCACAAGTTC............ 23 0 1 1.00 1 1 0 0 0
................................................................CAATTCACGTCGTCAAATATTTCC................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
........................................................................................AGCAGTTCACATCAGTCATCAAGCTCGA....................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..............................................................................................TCACATCAGTCATCAAGCTCGA....................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................AGCACAAGTTCCTCATCGACACA 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................AACAGCAACTCGACAACAAGC.................... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................CAACAGCAACTCGACAACAAGCACAAG............... 27 0 1 1.00 1 1 0 0 0
..................................................................AGTCACGTCGTCAAATATTTCC................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0
...........AATACATCGAACAGCCCATCAAAC........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0
...........................................................................................AGTTCACATCAGTCATCAAGCTCGACAT.................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................AGCAACTCGACAACAAGCACAA................ 22 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................GTCACCAACAGCAACTCGACAACA....................... 24 0 1 1.00 1 1 0 0 0
.................................................................AATTCACGTCGTCAAATATTTCC................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0
....................................................ATAGTCACACGCCAATTCACGT................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................CGTTAAGATGGTCACCAACA..................................... 20 2 1 1.00 1 0 0 1 0
.........................................................................................GCAGTTCACATCAGTCATCAAGCTC......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................................................................................CGACATCGACGGCGGACGTTAAG................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................AGCAACTCGACAACAAGCACAAGTTCC........... 27 0 1 1.00 1 0 1 0 0
......................................................................................CCAGCAGTTCACATCAGTCATCAAGCTC......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
............................................................................................................AAGCTCGACATCGACGGCGGAC......................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.................................................................................................................CGACATCGACGGCGGACGTTAAGATG................................................................................................................ 26 1 1 1.00 1 1 0 0 0
............................................................................................GTTCACATCAGTCATCAAGCT.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................AACTCGACAACAAGCACAA................ 19 0 1 1.00 1 1 0 0 0
........................GCACATCAAACCGGCTCCTC............................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0
......................................................AGCCACACGCCAATTCACGTCGTC............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.................................................................................................................CGACATCGACGGCGGACGT....................................................................................................................... 19 0 1 1.00 1 1 0 0 0
......................................................................ACGTCGTCAAATATTTCCAGCAGTTC........................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.....................................................................................................................ATCGACGGCGGACGTTAAGATGGT.............................................................................................................. 24 3 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................................ACTCGACAACAAGCACAAGTTCCTCATC...... 28 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................GGTCACCAACAGCAACTCGAC........................... 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................ATGGTCACCAACAGCAACTCGA............................ 22 0 1 1.00 1 1 0 0 0
.............................................................CGCCAATTCACGTCGTCAAA.......................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1
....................................................................................TTCCAGCAGTTCACATCAGTC.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................ATTAATTCAAAAAGGGGCTT............................................................................ 20 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TTGTCTAGCTTTTATGTAGCTTGTCGGGTAGTTTGGCCGAGGAGGTGGCTAATATCGGTGTGCGGTTAAGTGCAGCAGTTTATAAAGGTCGTCAAGTGTAGTCAGTAGTTCGAGCTGTAGCTGCCGCCTGCAATTCCACTCTCATCTTCCTGTATTAACTAAGTTTTTCCCCAGATTAACTAACCATTGACAAAGAAAATCTACCAGTGGTTGTCGTTGAGCTGTTGTTCGTGTTCAAGGAGTAGCTGTGT
**************************************************************************************************************************************....................((.........................................))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V110
male body		 M046
female body
 V056
head
.......................TCGGGTAGTTTGGCCGACGGTGT............................................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0
...........................GTAGTTTGGCGGAGGAAATG............................................................................................................................................................................................................ 20 3 2 0.50 1 0 1 0 0
.......................................................GGGTGTGCGGATAAGGGCAG................................................................................................................................................................................ 20 3 10 0.20 2 0 2 0 0
......................................................................................................................................................................................................................CGTTAAGCTGTCGTTCGTG.................. 19 2 6 0.17 1 0 0 1 0
...................................................................................................................................................................................................................TGTCGTTGGGCGGTAGTTCGT................... 21 3 9 0.11 1 0 0 0 1
.................................TGGCCGCGCAGATGGCTAA....................................................................................................................................................................................................... 19 3 10 0.10 1 0 1 0 0
........................................................GTTGTGGGGTTAGGTGCAG................................................................................................................................................................................ 19 3 18 0.06 1 0 1 0 0
....................................................................................................................................................................................TAACCATTCACAAAGCAAG.................................................... 19 3 20 0.05 1 0 0 1 0
................................................................................................................AGCTGTAGGAGCCGCTTGC........................................................................................................................ 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:597990-598240 + dmo_1313 A---A----CAGATCGAAAATACATCGAACAGCCCATCAAACCGGCTCCTCCACCGATTATAGCCACACGCCAATTCACGTCGTCAAATATTTCCAGCAGTTCACATCAGTCATCAAGCTCGACATCGACGGCGGACGTTAAGGTGAGAGTAGAAGGACATAATTGAT----------------------------------TCAAAAAGGG--GTCTAA-------------TTGA-T---T-------GGT----------AACTGT--------------T-TCTTTT--------AGATGGTCACCAACAGCAA---CTCGACAACAAGCACA---AGTTCCTCATCGACACA
droVir3 scaffold_13052:1586794-1587026 + dvi_21836 A---A----TAGATCGCAAGTATATAGAGCAACACTTCAAGCCAACACCACCCCCGATTATAACAACCCGCCAGTTTACATCGTCAGCTACTTCCAGCAACTCGCAGCAAACATCAAGCACTAGAACGACATCGGATGGCAAGGTAAATGATGGCTA-----------------------------------------------------AGTTTTTTATT---ATTTGTAAATTCGATCAGT----AAT-----CGGACGCAA-------------------T-TTTCTC--------AGAC------------------TGTCATCACCAATTCA---AGTTCCTCA---ACACA
droGri2 scaffold_14822:598632-598859 + A---A----CAGATCGCAAATATATCGAGCAGCCCATAAAGCCAGCTCCACCGCCAATAATAACCACAAGACAGTTCGCATCGTCCA---------GCCAATCGCAGCAGACATCGAGCACTAGAACGGCGGCGGATGGCAGAGTAAGCGGT-----------------------------------------------------------------TAAT---CGACAACAGTTGA-C---A-------GTTACTAATATAGG--------------GCATGCATTTTGC--------AGAC------TACCAGCAC---CAACGTAAGCAGCACA---AGTTCCTCAACGACACA
droWil2 scf2_1100000004943:1710508-1710732 + ATCCACCTCTAGATCGGAAATATATTGAGCAACCCATAAAACCAGCTCCACCGCCGGTTATAACAACCCGCCAGTTCACATCATCTTCAACC---------------AACAAATC------------------CGAAACAAAGGCAAGTGATTTATT-----------GAATTGTTC----------------------------------------AGAT---CCTCTGAATTAGA-TAATTTTGACAT-----CGG--------------------A-ATAT-ATTTTT--------AGGA------TGGCAATACCATAATCACATCAAGCTCA---AGTTCCTCAACTACACA
dp5 Unknown_group_8:173345-173566 - A---A----CAGATCGCAAGTATATAGAGCAGCCGATTAAACCTGCCCCACCACCAATTATAACATCCCGCCAGTTTACTTCA------ACA------------CATAACTCGTC------------------AGAAACTAAGGTAAGTAGTCCAAT-----------GGACAAAACTATCTTTTTGCAATAGTGTATGCGT--------------------------------TTA-T--TTTTGGAAT-----TGG-----------------------TTG-AATTAC--------AGAC------TGACAGTAC---TACCACATCAAGCTCAACTAGTTCCTCTACCATACA
droPer2 scaffold_42:595522-595568 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------TGACAGTAC---TACCACATCAAGCTCAACTAGTTCCTCTACCATACA
droAna3 scaffold_13089:661413-661597 + A---T----CAGATCGCAAATACATAGAGCAGCCACTTAAACCAGCGCCACCTCAAATTGTAACATCCCGCCAGCTCACCTCAACTTCAATG------------CAAGAAACTTC------------------TGAAACTAAAGTAAGTGTCTTTGGTTTTATTTTAT-----------------------AAGAG--------------AAACTT------------TCATTGTTA-G---T-------ATTG-------------------------------AAATAT--------AGAA------CGACGAAAA---T---------------------------AGCAATCA
droBip1 scf7180000395597:32254-32454 + A---T----CAGATCGCAAATACATAGAGCAGCCACTTAAACCAGCGCCACCTCCAATTGTAACATCCCGGCAGCTCCCATCAACATCAATG------------CTAGGAACTTC------------------TGAAACTAAAGTAAGTGTTTTTTTC------------------------------CTTAACGTATATAT--------------------------------TAA-T-ATT----TAT-----TAAATAAAAACTTTTTTTGTTACT-ATTA-AAATAA--------AGGC------TGACAAAAA---T---------------------------AGCAATCA
droKik1 scf7180000301930:8058-8239 - A---A----CAGACCGGAAGTACATAGAGCAGCCATTAAAGCCAGCACCGCCACCAATAATTTCATCTCGGCAGTACAACCCAACT---------------------------TC------------------TGAAACAAAGGCAAGAGCTGTCATTAA--------------------------------------------------AATCTTTCATT---GTTTT----ATAA-T---T-------AATA-------------------------------TATAAAAAATCGCCAGGC------CAACAAAAA---AGACGA---------------ATCTTTAGCGGCACA
droFic1 scf7180000454040:385883-386060 + AAAAA----CAGACAGGAAATATATAGAGCAACCAATCAAGCCGGCCCCGCCCCCAATAGTAACAGCCCGCCAAATAACTTCTACTTCAA---------------------CACC------------------TGAATCTACGGCAAGTATTGAAAATAATGTG-----------------------------------------------------TCCT-TA--TTCCATACTTA-T---T-------TATA-------------------------------AACTTT--------AGGC------CAACAAAAT---A---------------------ACTTCAACCCCGCA
droEle1 scf7180000491238:414748-414951 - AAA-A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCCGCTCCTCCGCCTATCGTTACATCCCGTCAGTTCACCTCAACTTTAATA------------CCGAACACATC------------------GGAGTCTAAGGCAAGTACTTAAAATTAAATA-----------------------------------------------------AGTT-AA--TTCTATATTGA-T---T-------GGGC-------------------------------AATTAT--------AGGC------CGCCACAAC---CACTGCGTCCAACTCA---AGTTCTTCAAGCACACA
droRho1 scf7180000780158:659-848 + AAA-A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCTCCGCCTATAGTAACATCCCGCCAGGTCACCTCAACTTCAATT------------CAGAGCACATC------------------GGAGTCTAAGGCAAGTACTCAAAGAT---------------------------------------------------AAAGTTATG-T---CACCTCATATTTA-T---T-------GGTC-------------------------------AATTAT--------AGTC------CGACAAGAC------------------A---AGTTCTTCAAGCACGCA
droBia1 scf7180000301495:716379-716580 + A---A----CAGATAGAAAATATATAGAACAGCCAATTAAGCCAGCGCCTCCACCAATTGTAACATCCCGCCAGTTTACCTCATCTTCAATC------------CAGAGCACATC------------------GGAATCTAAGGCAAGCATTAAAAATTGTATA-----------------------------------------------------TCTT-GA--TAGCATATTTA-C---T-------GATC-------------------------------AGTTCT--------AGGC------CGACCAAAC---CACTGTTTCCAACACA---AGTTCTTCAAGCACTCA
droTak1 scf7180000415288:135923-136124 + A---A----CAGATAGGAAATACATAGAGCAGCCACTTAAGCCGGCTCCTCCCCCAATAATAACATCCCGCCAGTTTACCTCATCTTTAACG------------CAGAGCACATC------------------GGAGTCTAAGGCAAGTTTTTAAAATTCTATA-----------------------------------------------------GCCT-GA--TCGTATAGTCA-T---C-------AGTC-------------------------------AATTAT--------AGGC------CGACAAAAC---CACTGTGTCCGACTCA---AGTTCTTCAAGCACGCA
droEug1 scf7180000408984:407007-407211 - AAA-A----CAGATAGAAAATACATAGAACAGCCAATGAAGCCTGCTCCTACCCCAATAGTTACATCCCGCCAGTTCGCCCCACTTTCATCG------------CAGGGTACTTC------------------GAAGTCTAGTGTAAGTTCTCAAAATTACATA-----------------------------------------------------TCGT-ATCATCACCTATT-A-A---T-------TGCC-------------------------------AATTAT--------AGAG------CAATAATAC---AACAGGGACCATCACA---AGTTCGTCAGGCACGCA
dm3 chr4:794638-794846 + A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTATACATCATCTTCAGTC------------CAAAACACATC------------------TGAACCACAGGTAAGTAAAAAATT-----------TAAATTTTA----AA-------------------TTTAAAAAAATTTTATGAT---ATTTT----TTTA-T---T-------ATTC-------------------------------TGTTAT--------AGGG------TGACAAAGT---AAATGTGTCCAACTCA---AACTCATCA--------
droSim2 4:607154-607346 + A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTTTACATCATCTTCAGTC------------CAAAACACATC------------------TGAACCAAAGGTAAGTAAAAAAA------------------------------------------------------AATCGTATGCT-AT--TTTTGTATTTA-T---T-------ATTC-------------------------------TGTTAT--------AGGG------TGACAAAGC---GAATGTATCCAACTCA---AACTCATCA--------
droSec2 scaffold_30:510050-510244 + A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTTTGCATCATCTTCAGTC------------CAAAACACATC------------------TGAACCACAGGTAAGTAAAAAAA------------------------------------------------------AATCGTATGCTATT--TTTTGTATTTA-T---T-------ATTC-------------------------------TGTTAT--------AGTG------TGACAAAGC---GAATGTATCCAACTCA---ACCTCATCAG-------
droYak3 4:857256-857457 + A---A----CAGATAGGAAATACATTGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTAACATCACGGCAATTCACATCATCTTCAGTC------------AAAAGCACATC------------------TGAGTCGCAGGTAAGTAATAAAAA-----------------------------------------------------AATCTTTTGAT---CTTTTTATATTTA-T---T-------ATTT-------------------------------TGTTAT--------AGGC------TGACAAAGC---AATTGTTTCCAACTCA---AACTCTTCAAGCTCGCA
droEre2 scaffold_4512:468608-468808 - A--------CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCCCCCAATAGTGACATCACGACAGTTCACATCATCTTCAGTC------------CAAAGCACATC------------------TGAACCGCAGGTAAGTAATAAAAT-----------------------------------------------------AATCTTTTGAT---CTTTTTATATTCA-T---T-------ATTC-------------------------------CGTTAT--------AGGA------TGACAAAAC---AATTGTGTCCAACTCA---AACTCTTCAAGCACCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
A---A----CAGATCGAAAATACATCGAACAGCCCATCAAACCGGCTCCTCCACCGATTATAGCCACACGCCAATTCACGTCGTCAAATATTTCCAGCAGTTCACATCAGTCATCAAGCTCGACATCGACGGCGGACGTTAAGGTGAGAGTAGAAGGACATAATTGAT----------------------------------TCAAAAAGGG--GTCTAA-------------TTGA-T---T-------GGT----------AACTGT--------------T-TCTTTT--------AGATGGTCACCAACAGCAA---CTCGACAACAAGCACA---AGTTCCTCATCGACACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................GTTCACATCAGTCATCAAGCTCGAC.........................................................................................................................................................................................................................................2512.002200000
.......................ATCGAACAGCCCATCAAACCGGCTCCTC..................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................ATAGCCACACGCCAATTCAC......................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................................................AA---CTCGACAACAAGCACA---AGTTC............2311.001100000
.......................................................................CAATTCACGTCGTCAAATATTTCC......................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................AGCAGTTCACATCAGTCATCAAGCTCGA..........................................................................................................................................................................................................................................2811.001100000
.....................................................................................................TCACATCAGTCATCAAGCTCGA..........................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................AGCACA---AGTTCCTCATCGACACA2311.001100000
......................................................................................................................................................................................................................................................................................................................AACAGCAA---CTCGACAACAAGC.......................2111.001100000
.....................................................................................................................................................................................................................................................................................................................CAACAGCAA---CTCGACAACAAGCACA---AG...............2711.001100000
..................AATACATCGAACAGCCCATCAAAC...........................................................................................................................................................................................................................................................................................................................2411.001000001
..................................................................................................AGTTCACATCAGTCATCAAGCTCGACAT.......................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................AGCAA---CTCGACAACAAGCACA---A................2211.001100000
................................................................................................................................................................................................................................................................................................................GTCACCAACAGCAA---CTCGACAACA..........................2411.001100000
........................................................................AATTCACGTCGTCAAATATTTCC......................................................................................................................................................................................................................................................................2311.001000001
................................................................................................GCAGTTCACATCAGTCATCAAGCTC............................................................................................................................................................................................................................................2511.001100000
........................................................................................................................CGACATCGACGGCGGACGTTAAG......................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................AGCAA---CTCGACAACAAGCACA---AGTTCC...........2711.001000010
.............................................................................................CCAGCAGTTCACATCAGTCATCAAGCTC............................................................................................................................................................................................................................................2811.001100000
...................................................................................................................AAGCTCGACATCGACGGCGGAC............................................................................................................................................................................................................................2211.001100000
...................................................................................................GTTCACATCAGTCATCAAGCT.............................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................AA---CTCGACAACAAGCACA---A................1911.001100000
.............................................................AGCCACACGCCAATTCACGTCGTC................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................CGACATCGACGGCGGACGT..........................................................................................................................................................................................................................1911.001100000
.............................................................................ACGTCGTCAAATATTTCCAGCAGTTC..............................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................A---CTCGACAACAAGCACA---AGTTCCTCATC......2811.001100000
...............................................................................................................................................................................................................................................................................................................GGTCACCAACAGCAA---CTCGAC..............................2111.001100000
.............................................................................................................................................................................................................................................................................................................ATGGTCACCAACAGCAA---CTCGA...............................2211.001100000
....................................................................CGCCAATTCACGTCGTCAAA.............................................................................................................................................................................................................................................................................2011.001001000
...........................................................................................TTCCAGCAGTTCACATCAGTC.....................................................................................................................................................................................................................................................2111.001100000
droVir3
A---A----TAGATCGCAAGTATATAGAGCAACACTTCAAGCCAACACCACCCCCGATTATAACAACCCGCCAGTTTACATCGTCAGCTACTTCCAGCAACTCGCAGCAAACATCAAGCACTAGAACGACATCGGATGGCAAGGTAAATGATGGCTA-----------------------------------------------------AGTTTTTTATT---ATTTGTAAATTCGATCAGT----AAT-----CGGACGCAA-------------------T-TTTCTC--------AGAC------------------TGTCATCACCAATTCA---AGTTCCTCA---ACACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................GCACTAGAACGACATCGGATGGC.........................................................................................................................................................................................................................2313.003010100010000000000000000000000000000000000000000000000000000000
....................................................................CGCCAGTTTACATCGTCAGCTAC..........................................................................................................................................................................................................................................................................2312.002010000000000000000000000000000000000000000000000000000000100000
....................................................................CGCCAGTTTACATCGTCAGCTACT.........................................................................................................................................................................................................................................................................2412.002000000000000000001000000000000000000000000000000000000000000010
...........................................................................................................................GAACGACATCGGATGGCA........................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.......................ATAGAGCAACACTTCAAGCC..........................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................ACCCGCCAGTTTACATCGTC................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................AACCCGCCAGTTTACATCGT.................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................TCAAGCACTAGAACGACATCGGATGGCC........................................................................................................................................................................................................................2811.001000000000000000010000000000000000000000000000000000000000000000
.................................................................ACCCGCCAGTTTACATCGTCAGCTAC..........................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................ACTCGCAGCAAACATCAAGCA.............................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGTCATCACCAATTCA---AGTTCCTCA---.....2511.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................ACTTCCAGCAACTCGCAGCAA.......................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................ATAGAGCAACACTTCAAGC...........................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................GCAGCAAACATCAAGCACTA..........................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................CATCGTCAGCTACTTCCAGC...................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AGAACGACATCGGATGGCAAG......................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AACATCAAGCACTAGAACGA....................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTCATCACCAATTCA---AGTTCC...........2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GCACTAGAACGACATCGGATGG..........................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TCAAGCACTAGAACGACATCGGATGGC.........................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................ACTTCCAGCAACTCGCAGCAAACATCA.................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................CTCGCAGCAAACATCAAGCA.............................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................CTTCAAGCCAACACCACCCC...............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AGCAAACATCAAGCACTAGAACGACATC................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AGAACGACATCGGATGGCA........................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................GAACGACATCGGATGGCAAGACT...................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTCGCAGCAAACATCAAGCACTAGAACG.....................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................AAGCACTAGAACGACATCGGATGGC.........................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AGCACTAGAACGACATCGGATGGC.........................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..................AGTATATAGAGCAACACTTC...............................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AGCACTAGAACGACATCGGATG...........................................................................................................................................................................................................................2211.001000001000000000000000000000000000000000000000000000000000000000
.....................................................................GCCAGTTTACATCGTCAGC.............................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CACTAGAACGACATCGGATGGCA........................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACTAGAACGACATCGGATGGCAAGG.....................................................................................................................................................................................................................2511.001000000100000000000000000000000000000000000000000000000000000000
.................................................................................................CAACTCGCAGCAAACATCAAGCA.............................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................TCAAGCACTAGAACGACATCGGATGGCA........................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
......................TATAGAGCAACACTTCAAGCCAACACC....................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................CACTAGAACGACATCGGATGGCAAGACT...................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
..............................AACACTTCAAGCCAACACC....................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........AGATCGCAAGTATATAGAGCG......................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AACATCAAGCACTAGAACGACATC................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................ATAACAACCCGCCAGTTTACATCGTC................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................ATCAAGCACTAGAACGACATC................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................ACATCAAGCACTAGAACGACATCGGATG...........................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................CGCAGCAAACATCAAGCACTAGAACGAC...................................................................................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
......................................................CGATTATAACAACCCGCCAGTTTACATC...................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GCAAACATCAAGCACTAGA........................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................ACTAGAACGACATCGGATGGCAA.......................................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
.................................................................ACCCGCCAGTTTACATCGTCAGCT............................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................ATCAAGCACTAGAACGACA..................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................GTATATAGAGCAACACTTCAAGCC..........................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...................GTATATAGAGCAACACTTCA..............................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................AGTTTACATCGTCAGCTACTTCCA.....................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAGAACGACATCGGATGGCAAG......................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................GTCAGCTACTTCCAGCAACTCGCAG..........................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....................................TCAAGCCAACACCACCCCCGATTAT........................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.......................ATAGAGCAACACTTCAAGCCA.........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................CGTCAGCTACTTCCAGCAACTCGCAG..........................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................TACTTCCAGCAACTCGCA...........................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................ACGACATCGGATGGCAAGAC....................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................AAGCACTAGAACGACATCGGAT............................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
........................TAGAGCAACACTTCAAGCCAACACC....................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAT-----CGGACGCAA-------------------T-TTTCTC--------AG........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................AGTATATAGAGCAACACTTCA..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
...............................ACACTTCAAGCCAACACCACCCCCGATTA.........................................................................................................................................................................................................................................................................................................2911.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................CAACTCGCAGCAAACATCA.................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.................AAGTATATAGAGCAACACTTCA..............................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................AGAC------------------TGTCATCACCAATTCA---AGTTCCTCA---.....2911.001001000000000000000000000000000000000000000000000000000000000000
.....................ATATAGAGCAACACTTCA..............................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................CGCAGCAAACATCAAGCACT...........................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GACATCGGATGGCAAGAC....................................................................................................................................................................................................................1840.251010000000000000000000000000000000000000000000000000000000000000
droGri2
A---A----CAGATCGCAAATATATCGAGCAGCCCATAAAGCCAGCTCCACCGCCAATAATAACCACAAGACAGTTCGCATCGTCCA---------GCCAATCGCAGCAGACATCGAGCACTAGAACGGCGGCGGATGGCAGAGTAAGCGGT-----------------------------------------------------------------TAAT---CGACAACAGTTGA-C---A-------GTTACTAATATAGG--------------GCATGCATTTTGC--------AGAC------TACCAGCAC---CAACGTAAGCAGCACA---AGTTCCTCAACGACACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................TCGAGCAGCCCATAAAGCC..........................................................................................................................................................................................................................................................................................................................1911.00110
.................AAATATATCGAGCAGCCCA.................................................................................................................................................................................................................................................................................................................................1911.00110
..................................................................................GTCCA---------GCCAATCGCAGCAG.......................................................................................................................................................................................................................................................1911.00110
droWil2
ATCCACCTCTAGATCGGAAATATATTGAGCAACCCATAAAACCAGCTCCACCGCCGGTTATAACAACCCGCCAGTTCACATCATCTTCAACC---------------AACAAATC------------------CGAAACAAAGGCAAGTGATTTATT-----------GAATTGTTC----------------------------------------AGAT---CCTCTGAATTAGA-TAATTTTGACAT-----CGG--------------------A-ATAT-ATTTTT--------AGGA------TGGCAATACCATAATCACATCAAGCTCA---AGTTCCTCAACTACACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............ATCGGAAATATATTGAGC.......................................................................................................................................................................................................................................................................................................................................1812.00220000
..................AATATATTGAGCAACCCATAAAACC..........................................................................................................................................................................................................................................................................................................................2512.00200110
.........................TGAGCAACCCATAAAACC..........................................................................................................................................................................................................................................................................................................................1812.00220000
.........................................................................................................................................................................................................................................................................................................................AATACCATAATCACATCAAGCT......................2211.00100010
...................................ATAAAACCAGCTCCACCGCCGGTTAT........................................................................................................................................................................................................................................................................................................2611.00101000
...................ATATATTGAGCAACCCATAAAACCAGC.......................................................................................................................................................................................................................................................................................................................2711.00100001
....................TATATTGAGCAACCCATAAAACCAGCT......................................................................................................................................................................................................................................................................................................................2711.00100010
............................................................................CACATCATCTTCAACC---------------AACAAATC------------------CGA.............................................................................................................................................................................................................................2711.00100010
.............TCGGAAATATATTGAGCAACC...................................................................................................................................................................................................................................................................................................................................2111.00110000
............................GCAACCCATAAAACCAGCT......................................................................................................................................................................................................................................................................................................................1911.00100010
..................AATATATTGAGCAACCCATAAAACCAGC.......................................................................................................................................................................................................................................................................................................................2811.00100010
.....................................................................................................................................................................................................................................................................................................................................ACATCAAGCTCA---AGTTCCT..........1911.00100100
..........................................................................................................................................................................................................................................................................................................................................AAGCTCA---AGTTCCTCAACTACAC.2311.00101000
............................................................................................................................................................................................................................................................................................................................ACCATAATCACATCAAGCT......................1911.00100010
...........GATCGGAAATATATTGAGC.......................................................................................................................................................................................................................................................................................................................................1911.00101000
.........................................CCAGCTCCACCGCCGGTTATAACA....................................................................................................................................................................................................................................................................................................2411.00101000
...................................ATAAAACCAGCTCCACCGCC..............................................................................................................................................................................................................................................................................................................2011.00100010
..........................................................................................................................................................................................................................................................................................................................ATACCATAATCACATCAAGCTC.....................2211.00100010
.......................................................................................................................................................................................................................................................................................................................................ATCAAGCTCA---AGTTCCTCAACTA....2311.00100010
....................................................................................................................................................................................................................................................................................................................................CACATCAAGCTCA---AGTTCCTCAA.......2311.00100010
........................TTGAGCAACCCATAAAACCAG........................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................................ACC---------------AACAAATC------------------CGAAACAAAGG.....................................................................................................................................................................................................................2211.00100010
dp5
A---A----CAGATCGCAAGTATATAGAGCAGCCGATTAAACCTGCCCCACCACCAATTATAACATCCCGCCAGTTTACTTCA------ACA------------CATAACTCGTC------------------AGAAACTAAGGTAAGTAGTCCAAT-----------GGACAAAACTATCTTTTTGCAATAGTGTATGCGT--------------------------------TTA-T--TTTTGGAAT-----TGG-----------------------TTG-AATTAC--------AGAC------TGACAGTAC---TACCACATCAAGCTCAACTAGTTCCTCTACCATACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................ATCAAGCTCAACTAGTTCCTCTACC.....2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................ACATCAAGCTCAACTAGTTCCTC.........2311.0010001000000
.................................................................................................................................................................................................................................................................................................................................TACCACATCAAGCTCAACTAGTTCC...........2511.0010000010000
......................................................................................................................................................................................................................................................................................................................................CATCAAGCTCAACTAGTTCCTCTACCATA..2911.0010001000000
..........................................................................................CA------------CATAACTCGTC------------------AGAAACT.........................................................................................................................................................................................................................2011.0010100000000
..................................................................................A------ACA------------CATAACTCGTC------------------AGAAACTAA.......................................................................................................................................................................................................................2411.0010001000000
........................................................................................................................................................................................................................................................................................................................................TCAAGCTCAACTAGTTCCTCTACC.....2411.0010100000000
.......................................................AATTATAACATCCCGCCAGTTTACTTCA------............................................................................................................................................................................................................................................................................2811.0010100000000
................................................................................TCA------ACA------------CATAACTCGTC------------------AGA.............................................................................................................................................................................................................................2011.0010000010000
.....................................................................................................................................................................................................................................................................................................................................ACATCAAGCTCAACTAGTTCC...........2111.0010010000000
droPer2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------TGACAGTAC---TACCACATCAAGCTCAACTAGTTCCTCTACCATACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................TCAAGCTCAACTAGTTCCTCT........2111.001000010
...........................................................................................................................................................................................................................................................................................................................................AGCTCAACTAGTTCCTCTACC.....2111.001010000
droAna3
A---T----CAGATCGCAAATACATAGAGCAGCCACTTAAACCAGCGCCACCTCAAATTGTAACATCCCGCCAGCTCACCTCAACTTCAATG------------CAAGAAACTTC------------------TGAAACTAAAGTAAGTGTCTTTGGTTTTATTTTAT-----------------------AAGAG--------------AAACTT------------TCATTGTTA-G---T-------ATTG-------------------------------AAATAT--------AGAA------CGACGAAAA---T---------------------------AGCAATCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................CAAATTGTAACATCCCGCCAGCTCACCT....................................................................................................................................................................................................................................................................................2811.001010000
......................CATAGAGCAGCCACTTAAACCAGC.......................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................................TG------------CAAGAAACTTC------------------TGAAACT.........................................................................................................................................................................................................................2011.001010000
....................TACATAGAGCAGCCACTTAAACC..........................................................................................................................................................................................................................................................................................................................2311.001000001
..........................GAGCAGCCACTTAAACCAGC.......................................................................................................................................................................................................................................................................................................................2011.001000001
..........................................................................CTCACCTCAACTTCAATG------------CAAGA........................................................................................................................................................................................................................................................2311.001010000
...........................................................GTAACATCCCGCCAGCTCACCT....................................................................................................................................................................................................................................................................................2211.001100000
.....................................TAAACCAGCGCCACCTCAAATTGT........................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................CCCGCCAGCTCACCTCAACTTCA............................................................................................................................................................................................................................................................................2311.001100000
.................AAATACATAGAGCAGCCACT................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................................................AATTGTAACATCCCGCCAGCTCACCT....................................................................................................................................................................................................................................................................................2611.001100000
..................AATACATAGAGCAGCCACT................................................................................................................................................................................................................................................................................................................................1911.001000001
.............................................................AACATCCCGCCAGCTCACCT....................................................................................................................................................................................................................................................................................2011.001010000
.............................CAGCCACTTAAACCAGCGCC....................................................................................................................................................................................................................................................................................................................2011.001010000
...........GATCGCAAATACATAGAGC.......................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................ATTGTAACATCCCGCCAGCT.........................................................................................................................................................................................................................................................................................2011.001010000
...................ATACATAGAGCAGCCACTTAAAG...........................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................AACATCCCGCCAGCTCACCTC...................................................................................................................................................................................................................................................................................2111.001010000
........................TAGAGCAGCCACTTAAACCAGCGCCACC.................................................................................................................................................................................................................................................................................................................2811.001000001
......................CATAGAGCAGCCACTTAAACC..........................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................CACCTCAACTTCAATG------------CAAGA........................................................................................................................................................................................................................................................2111.001010000
droBip1
A---T----CAGATCGCAAATACATAGAGCAGCCACTTAAACCAGCGCCACCTCCAATTGTAACATCCCGGCAGCTCCCATCAACATCAATG------------CTAGGAACTTC------------------TGAAACTAAAGTAAGTGTTTTTTTC------------------------------CTTAACGTATATAT--------------------------------TAA-T-ATT----TAT-----TAAATAAAAACTTTTTTTGTTACT-ATTA-AAATAA--------AGGC------TGACAAAAA---T---------------------------AGCAATCASizeHit CountTotal NormTotal
No Reads
droKik1
A---A----CAGACCGGAAGTACATAGAGCAGCCATTAAAGCCAGCACCGCCACCAATAATTTCATCTCGGCAGTACAACCCAACT---------------------------TC------------------TGAAACAAAGGCAAGAGCTGTCATTAA--------------------------------------------------AATCTTTCATT---GTTTT----ATAA-T---T-------AATA-------------------------------TATAAAAAATCGCCAGGC------CAACAAAAA---AGACGA---------------ATCTTTAGCGGCACASizeHit CountTotal NormTotal
No Reads
droFic1
AAAAA----CAGACAGGAAATATATAGAGCAACCAATCAAGCCGGCCCCGCCCCCAATAGTAACAGCCCGCCAAATAACTTCTACTTCAA---------------------CACC------------------TGAATCTACGGCAAGTATTGAAAATAATGTG-----------------------------------------------------TCCT-TA--TTCCATACTTA-T---T-------TATA-------------------------------AACTTT--------AGGC------CAACAAAAT---A---------------------ACTTCAACCCCGCASizeHit CountTotal NormTotal
No Reads
droEle1
AAA-A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCCGCTCCTCCGCCTATCGTTACATCCCGTCAGTTCACCTCAACTTTAATA------------CCGAACACATC------------------GGAGTCTAAGGCAAGTACTTAAAATTAAATA-----------------------------------------------------AGTT-AA--TTCTATATTGA-T---T-------GGGC-------------------------------AATTAT--------AGGC------CGCCACAAC---CACTGCGTCCAACTCA---AGTTCTTCAAGCACACASizeHit CountTotal NormTotal
No Reads
droRho1
AAA-A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCTCCGCCTATAGTAACATCCCGCCAGGTCACCTCAACTTCAATT------------CAGAGCACATC------------------GGAGTCTAAGGCAAGTACTCAAAGAT---------------------------------------------------AAAGTTATG-T---CACCTCATATTTA-T---T-------GGTC-------------------------------AATTAT--------AGTC------CGACAAGAC------------------A---AGTTCTTCAAGCACGCASizeHit CountTotal NormTotal
No Reads
droBia1
A---A----CAGATAGAAAATATATAGAACAGCCAATTAAGCCAGCGCCTCCACCAATTGTAACATCCCGCCAGTTTACCTCATCTTCAATC------------CAGAGCACATC------------------GGAATCTAAGGCAAGCATTAAAAATTGTATA-----------------------------------------------------TCTT-GA--TAGCATATTTA-C---T-------GATC-------------------------------AGTTCT--------AGGC------CGACCAAAC---CACTGTTTCCAACACA---AGTTCTTCAAGCACTCASizeHit CountTotal NormTotal
No Reads
droTak1
A---A----CAGATAGGAAATACATAGAGCAGCCACTTAAGCCGGCTCCTCCCCCAATAATAACATCCCGCCAGTTTACCTCATCTTTAACG------------CAGAGCACATC------------------GGAGTCTAAGGCAAGTTTTTAAAATTCTATA-----------------------------------------------------GCCT-GA--TCGTATAGTCA-T---C-------AGTC-------------------------------AATTAT--------AGGC------CGACAAAAC---CACTGTGTCCGACTCA---AGTTCTTCAAGCACGCASizeHit CountTotal NormTotal
No Reads
droEug1
AAA-A----CAGATAGAAAATACATAGAACAGCCAATGAAGCCTGCTCCTACCCCAATAGTTACATCCCGCCAGTTCGCCCCACTTTCATCG------------CAGGGTACTTC------------------GAAGTCTAGTGTAAGTTCTCAAAATTACATA-----------------------------------------------------TCGT-ATCATCACCTATT-A-A---T-------TGCC-------------------------------AATTAT--------AGAG------CAATAATAC---AACAGGGACCATCACA---AGTTCGTCAGGCACGCASizeHit CountTotal NormTotal
No Reads
dm3
A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTATACATCATCTTCAGTC------------CAAAACACATC------------------TGAACCACAGGTAAGTAAAAAATT-----------TAAATTTTA----AA-------------------TTTAAAAAAATTTTATGAT---ATTTT----TTTA-T---T-------ATTC-------------------------------TGTTAT--------AGGG------TGACAAAGT---AAATGTGTCCAACTCA---AACTCATCA--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................GAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAGT---AAATGTGTCCAACTCA---.................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAGTATACATCATCTTCAGTC------------CA...........................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GT---AAATGTGTCCAACTCA---.................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TACATAGAGCAGCCAATTA..............................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGG------TGACAAAGT---AAATGTGTCCA.........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000
...............GGAAATACATAGAGCAGCCA..................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCC..........................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTAAGCCAGCTCCCCTCCCA.............................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGG------TGACAAAGT---AAATG...............................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACATAGAGCAGCCAATTAA.............................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................GCAGTATACATCATCTTCAGTC------------CAA..........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATAGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCCAACT......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGTCCAACTCA---AACTCATCA--------2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACATAGAGCAGCCAATTA..............................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGCTCCCCTCCCAATAGTGACA....................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGCTCCCCTCCCAATAGTGAC.....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AGTGACATCCCGGCAGTA.........................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAGGAAATACATAGAGCAGCCA..................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAGT---AAATGTGTCCAACTC.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATACATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TACATAGAGCAGCCAATTAAGCCAGC.......................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
........................................................................................................CAAAACACATC------------------TGAACCACAGGTAAG.................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCCAGCTCCCCTCCCAATAGTGA......................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAGGAAATACATAGAGC.......................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GGAAATACATAGAGCAGCCAATTAA.............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCCAGCTCCCCTCCCAATAGTGACA....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................AGCCAATTAAGCCAGCTCCCCTC................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATACATAGAGCAGCCAATTA..............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCTCCCCTCCCAATAGTGAC.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AAACACATC------------------TGAACCACAGGGT...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............AGGAAATACATAGAGCAGCCAAT................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TCATCTTCAGTC------------CAAAACACATC------------------................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T---AAATGTGTCCAACTCA---AACTCA...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CCCAATAGTGACATCCCGGCAGTATACATC...................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GCCAGCTCCCCTCCCAATA..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCCA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTAAGCCAGCTCCCCTCCCA.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CATCATCTTCAGTC------------CAAAA........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATGTGTCCAACTCA---AACT.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TAGGAAATACATAGAGCAGCA...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATAGAGCAGCCAATTAAG............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CAGTATACATCATCTTCAGTC------------C............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACATAGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................GTAAGTAAAAAATT-----------TAAATTTTA----AA-------------------T..........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTAAGCCAGCTCCCCTCCCAATAGTGA......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CCCAATAGTGACATCCCGGCA............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCAGCCAATTAAGCCAGCTCCC...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCCAGCTCCCCTCCCAAT...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATAGAGCAGCCAATTAA.............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATCTTCAGTC------------CAAAACACA....................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGTC------------CAAAACACATC------------------TGAACCACA.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGATAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCCCGGCAGTATACATCATCT...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTC-------------------------------TGTTAT--------AGGG------TGACAAAA........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................TTCAGTC------------CAAAACACATC------------------TGAAATC.........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAGT---AAATGTGTCCAACTCA---AAC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATAGGAAATACATAGAGCA......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................ATAGTGACATCCCGGCAGTATACA.....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATACATAGAGCAGCCAATT...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGTC------------CAAAACACATC------------------TGAACCA.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCCAACTCA---.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGG------TGACAAAGT---AAATGTGTCCAA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T---AAATGTGTCCAACTCA---A................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AGT---AAATGTGTCCAACTC.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GCCAGCTCCCCTCCCAATAGT........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATACATAGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATAGGAAATACATAGAGCAGCCAAT................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................GCTCCCCTCCCAATAGTGACA....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGCCAATTAAGCCAGCTCC....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CCCCTCCCAATAGTGACATCC.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....A----CAGATAGGAAATACATAGAGCAGCCAATTAA.............................................................................................................................................................................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TCTTCAGTC------------CAAAACACAT...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATACATAGAGCAGCCAATTAAGC...........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGG------TGACAAAGT---AAATGTGTCCA.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CAAAACACATC------------------TGAACCACA.......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCCAACTCA---AA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGT---AAATGTGTCCAACTCA---AAC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATACATAGAGCAGCCAATTA..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TC------------CAAAACACATC------------------TGAACCACAGGGT...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAGAGCAGCCAATTAAGC...........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................ATCTTCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CCGGCAGTATACATCATCTTCAGTC------------CAA..........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGTCCAACTCA---AACTCATCA--------2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGG------TGACAAAGT---AAATGTGTCCAACT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AATAGTGACATCCCGGCAGT..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GGCAGTATACATCATCTTCAGTC------------CA...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATCATCTTCAGTC------------CAAAACACA....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GGCAGTATACATCATCTTCAGTC------------CAAAACACAT...................................................................................................................................................................................................................................................3311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TACATCATCTTCAGTC------------CAAAACACAA...................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAAGT---AAATGTGTCCAACTCA---AACTCATCA--------3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCCCAATAGTGACATCCCGGCAGT..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATAGTGACATCCCGGCAGTATA.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................CTTCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCCAGCTCCCCTCCCAATAGT........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................TTCAGTC------------CAAAACACATC------------------TG..............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAAGT---AAATGTGTCCAACTC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAGAGCAGCCAATTAAGCCAGCT......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCAGCCAATTAAGCCAGCTCCCC..................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T---AAATGTGTCCAACTCA---AACT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............ATAGGAAATACATAGAGCAGCCA..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CTTCAGTC------------CAAAACACATC------------------T...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CCTCCCAATAGTGACATCCC................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAGT---AAATGTGTCCAACT......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CCCGGCAGTATACATCATCTTCAGTC------------CA...........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TATACATCATCTTCAGTC------------CAAAACACA....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGTCCAACTCA---AACTCATC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GT---AAATGTGTCCAACTCA---AACTCATC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TAGGAAATACATAGAGCA......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGG------TGACAAAGT---AAATGTGT............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATAGGAAATACATAGAGCA......................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................A----AA-------------------TTTAAAAAAATTTTATA..........................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTTTACATCATCTTCAGTC------------CAAAACACATC------------------TGAACCAAAGGTAAGTAAAAAAA------------------------------------------------------AATCGTATGCT-AT--TTTTGTATTTA-T---T-------ATTC-------------------------------TGTTAT--------AGGG------TGACAAAGC---GAATGTATCCAACTCA---AACTCATCA--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............ATAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2214.00400400000000000000
..........................................................................................................................................................................................................................................................................................................................AAGC---GAATGTATCCAACT......................1812.00201000010000000000
....................................................................................CTTCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2512.00200200000000000000
......................................................................................................................................................................................................................................................................................................................GACAAAGC---GAATGTATCCAACTCA---AACT.............2812.00200200000000000000
.........................................................................................GTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2012.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................AAGC---GAATGTATCCAACTCA---AA...............2212.00200200000000000000
...........GATAGGAAATACATAGAGC.......................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
............ATAGGAAATACATAGAGC.......................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
...................................................................................TCTTCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2611.00100100000000000000
.............TAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
......................................................................................TCAGTC------------CAAAACACATC------------------TGAACCAAAGG.....................................................................................................................................................................................................................2811.00100000010000000000
....................................................................................CTTCAGTC------------CAAAACACATC------------------TGAACCAAAG......................................................................................................................................................................................................................2911.00100100000000000000
..................................................CTCCCAATAGTGACATCCC................................................................................................................................................................................................................................................................................................1911.00100000000000100000
........................................................................................................CAAAACACATC------------------TGAACCAAA.......................................................................................................................................................................................................................2011.00100100000000000000
...................ATACATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
................................................................................TCATCTTCAGTC------------CAAAACACATC------------------TGAACC..........................................................................................................................................................................................................................2911.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................AAAGC---GAATGTATCCAACTC.....................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................AAGC---GAATGTATCCAACTCA---AACTC............2511.00100100000000000000
...................ATACATAGAGCAGCCAATTAAGCCAGC.......................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
...................................................................................TCTTCAGTC------------CAAAACACATC------------------T...............................................................................................................................................................................................................................2111.00100000100000000000
droSec2
A---A----CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTGACATCCCGGCAGTTTGCATCATCTTCAGTC------------CAAAACACATC------------------TGAACCACAGGTAAGTAAAAAAA------------------------------------------------------AATCGTATGCTATT--TTTTGTATTTA-T---T-------ATTC-------------------------------TGTTAT--------AGTG------TGACAAAGC---GAATGTATCCAACTCA---ACCTCATCAG-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................GCAGTTTGCATCATCTTC.............................................................................................................................................................................................................................................................................1811.0011000
............ATAGGAAATACATAGAGCA......................................................................................................................................................................................................................................................................................................................................1911.0010001
........................TAGAGCAGCCAATTAAGCCA.........................................................................................................................................................................................................................................................................................................................2011.0010100
..................AATACATAGAGCAGCCAA.................................................................................................................................................................................................................................................................................................................................1811.0010010
..........AGATAGGAAATACATAGAGCA......................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................TGTTAT--------AGTG------TGACAAAGC---GAATGTA.............................2611.0010010
.........................................................................GTTTGCATCATCTTCAGTC------------CAAAACACA....................................................................................................................................................................................................................................................2811.0011000
...................ATACATAGAGCAGCCAATTAAGC...........................................................................................................................................................................................................................................................................................................................2311.0010100
...............................................................................................................CATC------------------TGAACCACAGGTAAGT................................................................................................................................................................................................................2011.0011000
............................................................................................................................................................................................................................................................................................................GTG------TGACAAAGC---GAATGTATCC..........................2211.0010010
........................................................ATAGTGACATCCCGGCAGTTTGCATCA..................................................................................................................................................................................................................................................................................2711.0011000
..................................AATTAAGCCAGCTCCCCTCCCAATAGT........................................................................................................................................................................................................................................................................................................2711.0010010
droYak3
A---A----CAGATAGGAAATACATTGAGCAGCCAATTAAGCCAGCTCCCCTCCCAATAGTAACATCACGGCAATTCACATCATCTTCAGTC------------AAAAGCACATC------------------TGAGTCGCAGGTAAGTAATAAAAA-----------------------------------------------------AATCTTTTGAT---CTTTTTATATTTA-T---T-------ATTT-------------------------------TGTTAT--------AGGC------TGACAAAGC---AATTGTTTCCAACTCA---AACTCTTCAAGCTCGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........GATAGGAAATACATTGAGC.......................................................................................................................................................................................................................................................................................................................................1912.00200000020000
...................................................................................TCTTCAGTC------------AAAAGCACATC------------------................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................AAAGC---AATTGTTTCCAACTCA---AACTCT...........2711.00100100000000
........................................................................................................................................................................................................................................................................................................................................TCCAACTCA---AACTCTTCAAGCT....2211.00100100000000
..............................................................................CATCATCTTCAGTC------------AAAAGC.......................................................................................................................................................................................................................................................2011.00100010000000
.........................................................................................GTC------------AAAAGCACATC------------------TGAGTCGCA.......................................................................................................................................................................................................................2311.00100000010000
..............AGGAAATACATTGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................TGACAAAGC---AATTGTTTCCAACTCA---AACT.............2911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................GTTTCCAACTCA---AACTCTTCAAGCT....2511.00100100000000
..................AATACATTGAGCAGCCAATTAAGCCAG........................................................................................................................................................................................................................................................................................................................2711.00100000010000
...................................ATTAAGCCAGCTCCCCTCCCAATA..........................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................ACATC------------------TGAGTCGCAGGCT...................................................................................................................................................................................................................1840.25110000000000
droEre2
A--------CAGATAGGAAATACATAGAGCAGCCAATTAAGCCAGCTCCCCCCCCAATAGTGACATCACGACAGTTCACATCATCTTCAGTC------------CAAAGCACATC------------------TGAACCGCAGGTAAGTAATAAAAT-----------------------------------------------------AATCTTTTGAT---CTTTTTATATTCA-T---T-------ATTC-------------------------------CGTTAT--------AGGA------TGACAAAAC---AATTGTGTCCAACTCA---AACTCTTCAAGCACCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................AATACATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2512.0020000200
...........GATAGGAAATACATAGAGC.......................................................................................................................................................................................................................................................................................................................................1912.0020200000
...................ATACATAGAGCAGCCAATTAAGCC..........................................................................................................................................................................................................................................................................................................................2411.0010000100
.............................................................................................................................................................................................................................................................................................................GA------TGACAAAAC---AATTGTGT............................1911.0010000100
...........GATAGGAAATACATAGAGCAGCCA..................................................................................................................................................................................................................................................................................................................................2411.0010000100
............ATAGGAAATACATAGAGCAGCCAAT................................................................................................................................................................................................................................................................................................................................2511.0010000100
..........AGATAGGAAATACATAGAGCAGC....................................................................................................................................................................................................................................................................................................................................2311.0010100000
.............TAGGAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................................AATAGTGACATCACGACAGTT.........................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................TCTTCAGTC------------CAAAGCACATC------------------TGAACC..........................................................................................................................................................................................................................2611.0011000000
..................................................................................ATCTTCAGTC------------CAAAGCACATC------------------TGAAC...........................................................................................................................................................................................................................2611.0010100000
........................................................................................................................................ACCGCAGGTAAGTAATAAA..........................................................................................................................................................................................................1911.0010000010
.................................................................................................................................................................................................................................................................................................................................AATTGTGTCCAACTCA---AACTCTTCAAG......2711.0011000000
.........................................CCAGCTCCCCCCCCAATAGTGACATCAC................................................................................................................................................................................................................................................................................................2811.0010100000
................GAAATACATAGAGCAGCC...................................................................................................................................................................................................................................................................................................................................1811.0011000000
..........................................................................................................AAGCACATC------------------TGAACCGCAGGAT...................................................................................................................................................................................................................2211.0010000010
.............TAGGAAATACATAGAGCAGCCAAT................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................C------------CAAAGCACATC------------------TGAACCGCAGGAT...................................................................................................................................................................................................................2511.0010000010
..........................................................................................................................................................................................................................................................................................................................AAAC---AATTGTGTCCAACTCA---AACT.............2411.0010001000
...........................................................................................C------------CAAAGCACATC------------------TGAACCGCAGG.....................................................................................................................................................................................................................2311.0011000000

Generated: 05/18/2015 at 12:09 AM