ID:

dmo_1304

 Coordinate:

scaffold_6498:473338-473488 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -19.0 -18.9

Flybase annnotation

CDS [Dmoj\GI14064-cds]; exon [dmoj_GLEANR_14111:2]; intron [Dmoj\GI14064-in]

Repeatable elements

NameClassFamilyStrand
Helitron1_DmojRCHelitron+
Helitron1_DmojRCHelitron+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##############------------------------------------
ATATATATATATATATATATATAAGAGTTTCCTAACTTATATATAGAAATGTTAATATATATATATGGAATATATACATTAAACAAGTAAGAACGTTGCAGTCAGGCGTTACCAACTGCAGAGTACTCATTCACATCCCATCAGCAATTTAATAGCTAAAATTACTAGTAACTCAACCCTCCAAATTTGATTTGATTCTAGCTCTTAAACTCTAGGAGATTTAAACTTTTGCGGTTTGCCACGGCCCTTGC
**************************************************.(((((.(((((((.....))))))).)))))...(((.((.((.(((((((..((.....)).))))))).)).)).)))...........(((.........))).......((((.((.((((...((.......)).))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V056
head
 V110
male body
.........................................................................................................GCGTTACCAACTGCAGAGTACTCATT........................................................................................................................ 26 0 1 1.00 1 1 0 0 0
.........................................................................................................GCGTTACCAACTGCAGAGTACTCAT......................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................................................................................CGTTACCAACTGCAGAGTACTCA.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................TCACATCCCATCAGCAATTTTAGC................................................................................................. 24 3 7 0.14 1 0 1 0 0
.................................................................................................................................................................................................................................CCTTGGCGTTTTGCCACGGCC..... 21 3 19 0.05 1 0 0 1 0
....................................................................................AAGTAAGAACGTTGCAGTCAG.................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1
..............................................................................TTAAACAAGTAAGAACGTTGCAGT..................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
................................................................................AAACAAGTAAGAACGGTGCAGTCAT.................................................................................................................................................. 25 2 20 0.05 1 0 1 0 0

Anti-sense strand reads

TATATATATATATATATATATATTCTCAAAGGATTGAATATATATCTTTACAATTATATATATATACCTTATATATGTAATTTGTTCATTCTTGCAACGTCAGTCCGCAATGGTTGACGTCTCATGAGTAAGTGTAGGGTAGTCGTTAAATTATCGATTTTAATGATCATTGAGTTGGGAGGTTTAAACTAAACTAAGATCGAGAATTTGAGATCCTCTAAATTTGAAAACGCCAAACGGTGCCGGGAACG
**************************************************.(((((.(((((((.....))))))).)))))...(((.((.((.(((((((..((.....)).))))))).)).)).)))...........(((.........))).......((((.((.((((...((.......)).))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
..............................................................................................CAACGTCAGTCCGCAATGGTT........................................................................................................................................ 21 0 2 0.50 1 0 1 0 0
...............................................................................................................................................................................TGGGATGTGTAAACTAAGC......................................................... 19 3 20 0.50 10 0 0 10 0
..........................................................................................TTTGCAACGTCAGTCCGCAATGGTT........................................................................................................................................ 25 1 2 0.50 1 1 0 0 0
...................................................................................................................................................................TGATCATTCAGTGGGCAGGT.................................................................... 20 3 4 0.25 1 0 0 0 1
.................................................................................................................................................................................................................................GCAAACGCCAAACGGTGCCGG..... 21 1 12 0.08 1 0 0 0 1
...........................................................................................................................ATGAGTAAGTGTAGGGTAGTCGTTAAA..................................................................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................................CTTGCAACGTCAGTCCGCAATGGGT........................................................................................................................................ 25 1 20 0.05 1 0 1 0 0
...........................................................................................................................ATGAGTAAGTGTAGGGTAGTCGTT........................................................................................................ 24 0 20 0.05 1 0 1 0 0
..........................................................................................CTTGCAACGTCAGTCCGCAATGG.......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:473288-473538 - dmo_1304 ATATATATATATATATATAT-----AT--AAGAGTTTCCTAA-----------CT----------------------------------------------------------------------------TATATATAGAAA--------TG--T-----------------TAATATATATATATGGAATATA--------------------------------------------------------------------------------TA----------------CATTA-----------------AA-CAAGTA-AGAACGTTGCAGTCA------------------------------GGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCAAC---------------------------------------------------------TGCAGAGT-------------------ACTCATTCACAT--------------------------------------------C--------------------------CCA-----------------------------------TCAGCAATTTAATAGCTAAAATTAC--------------TAGTAACTCAACCCTCCAAATTTG-ATTTGATTCTAGCT-CTTAAACTCTAGGAGATTTAAACTTTTGCGGTTTGCCACGGCCCTTGC
droVir3 scaffold_13047:338854-339075 + ATATACATATACATATACAT-----AT--ACA-----------TATACATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TAC--ATATACATATACAT---------------------ATA------------CATATACAA-------ACATTACACATT------ACACTTAAAGTAAAACAAGTA-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCGACAAGGGGATACCCTGAACCCTCT--TCTTCCAACATCAAAAGCATATATATATTCTATTTTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--GACTCTAGCT-CTTA--------------------------------------------
droGri2 scaffold_15252:15740301-15740532 - ACGCAAATGCATATAAATAT-----AT--ATA-----------TATACAGATATATACAGAT-------------------------------------------------------------------------------------------------------------------A------TATATATTATA--------------------------------------------------------------------------------TA----------------CAGTA-----------------AA-CAAGTT-AGAATGCTACAGTAG------------------------------AGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTCGAC---------------------------------------------------------TTTCCGAT-------------------ACTCTGTTAAATGTTTAGCATGCTTAATTGTGGCAGTTATCGATAAATGAAATCAGCTTGATCTGCTTTTTGTAGATGA---------------------------------------------------------A------AACTTTTGTTCCAAATTGAATGT-------TTCTGGTTTGC-AACAG---------CTTTT------------------------------------------GA
droWil2 scf2_1100000004824:63274-63442 - ATGTATATATATATGTATGT-----AT--ATA-----------CATATATA----------------------------------------------------------------------------------------------------TGTATG---------------------------------------------------------TGT--GTGTGGGTGT-TAC---------------------ATATAAGTACATGT----ATATA---AATAAATA-----TAATA--------------ATGTT--------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------ACATTACACAATT-TAGAAACACTC--------------------------------ACGTCGACAAATCACGTCAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACATTC-------------------------CAA--------------------------------------------
dp5 Unknown_singleton_2543:769-908 + ACATATATATATATATATAT-----ATA-ATA-----------TATATATA--TT----------------------------------------------------------------------------TATATATA----------------------TTATGT------AGATAT------ATAG--------------------------------------AC----------ATA------ATGTAA------------------ATATAT---------------------------------------------A-G---------------AGGTACCCAAAAAAGATATTTATAGTGCATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACCTAT---------------------------------------------------------TATAAAAC-------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---------TCACA--------------------------------------------
droPer2 scaffold_3218:603-723 + ATATACATATATATACATAT-----AT--ATA-----------CATATATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TAT--ATACATATATATAC---------------------ATAT----ATATACATATATATA-------------------------------------------AATA-AGA---------------TTGTCCGATTCGGTCATCAA------------------------------------------------------------------------------------------------------------TGCAAAGC-----------------------------------------------------------------------GCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------------------------------------CTC--------------------------------------------
droAna3 scaffold_13248:3980787-3980960 + AAATATATATATATAACTATT----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------CC--T-----------------AAA--------------------------------------AAG--AAAG-------------------------------------------------------------------------------------------------------------TCAAGCAG------------------------------AATA-----------------------TAA--------------------------------------------------------------------------------------TTA-ACAGAATATGTCAGATGTAAAACACAAGTAAGAACAATTTCCGTAATCAGTGTGGCGAGTAGTTAAC---------------------------------------------------------TTTC------------------------------------------------------------------------------------------------------------------------------------------TGA-AGTCAGTAATCTGATAACTAGAGTCTG--------------TAATA------------------------------------ACT--------------------------------------------
droBip1 scf7180000395396:16797-16962 - ATATATACATATATACATAT-----AT--ACA-----------TATATACATATATACATATATACATATTAATTAATAATTAATAATTAATACAC----------------------------------------------------------TGGTGCCCAAGCCCAGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAGCGAGTTCTTTT-CCACAAT-----------------------------------------------------AC------ACA--AAAATTT------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA---------------------------------------------------------AAAA-----T-ATTGATCCTAATTTAACA------------------------------------CTC--------------------------------------------
droKik1 scf7180000302258:293215-293399 - ATATATAAATAAATGTATATTCTCAGT--AATCAGT--------------------------------------------------------AATCTGATTTTTACGACTTAAATGTAATAT----------------AGAAA--------TGT---------------------------------TTTGTATA-------------------------TAT---------------------------------------------AGAAAAATA-------------------------------------------AATC-AGA---------------TAGTCCCACGAAAGTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAATTTAT--TATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAATAAAATAAATAAAATAAA--------------T---AA-TTAAATATTCAAGTTT------------------AAT--------------------------------------------
droFic1 scf7180000454107:1519889-1519988 - ATATATATATATATATATACT----ATATAGGAGTAGTATATATATATATA----------------------------------------------------------------------------------------------------TA-------------------------------------------------------------------TATATATATATAT---------------------ATAT----ATATATATATATATAC-------ATA---------T-----------------AA-CGAATT-TGAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491092:25394-25593 + ATATATATATATATATATAT-----TT--ATATATT--T--------TATA----------------------------------------------------------------------------------------------------TATATA---------------------------------------------------------TAT--ATATATTTATATAT---------------------ATAT----ATATACATATATATAC-------ATA-----TGG-GACGTTTC--------------------AC-GTCAACCGGCCCAGAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACCATATTGGGT-------------------------------------------------------------------------------------C--------------------------------------------C-------------------------GCCATTTTGAATTTTAAAAATCTGACTTCAGATTCGTAATCAGCAACCTCAAAACTATAAAAAT-----------------------------------------CAG---------TCATT--------------------------------------------
droRho1 scf7180000777807:957-1054 - ATATATACATACAAATATAC-----AT--AAG-----------TATAAATA----------------------------------------------------------------------------------------------------TAC-----------------------------------AATATA--------------------------------------------------------------------------------CA----------------CATAA-----------------AA-CAAGAG-AGAACGCTATAGTCG------------------------------GGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CCCGAC---------------------------------------------------------TATCAGAT-------------------ACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT--------------------------------------------
droBia1 scf7180000301285:14800-14982 + ATATATATATATATATATAT-----GC--AGAGGGT--------------------------------------------------------ACTTTGATTTCAGTCAGAAGTTTGTGACGCAGTAAAGTATATATATATATA--------TA--T-----------------AAATAGATAT--A----------------------------TAT--GA----------ATATATTT-------------------------------------------------------AT-----------------------------------------------------------------AGC------------------------------------AGAACTCATTTGAATCC--TT-AATTAGACTTAAAAGATTAATTTA-TATTTAAGGAA---------------------------------------------------------------------------------------------CTCAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-----------------------------------TT-----------------AATT--------------------------------------------
droTak1 scf7180000411343:21731-21831 - ATATATATATGTATATATAT-----AT--ATG-----------TATATATA----------------------------------------------------------------------------------------------------TATATG---------------------------------------------------------TAT--ATATATATATGTAT---------------------ATAT----ATATATGTATATATAC-------ATA-----TAT-G--------------ATT---------------TT-----------------------------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAA------------------------------------------------------------CGTT--------------------------------------------
droEug1 scf7180000409456:124411-124536 - GTATATATTTTTTTATAGCA-----AT--GAAAGCTGCCCAA----------------------------------------------------------------------------------TTAGCCATGTACATACGTATGTGAGAGTATATA---------------------------------------------------------GAC--AC----------ATATAGATATG------ACAGAG------------------ATATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGGGAGGCGTG----------------------------TGG-AGTGAGT------------------AT----------------CCA------------------------------------CAT--------------------------------------------
dm3 chr2L:22187515-22187702 + ATATATATATATATATATAT-----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------AACTAAAACCTTACGTAAACAT------------AAAAAAGATG--------------------------------------------------------------------------------TT----------------CACAA-----------------AA-TACACA-AAAAAGGTTAAATCA------------------------------AATA-----------------------TAA--------------------------------------------------------------------------------------TTACACAAAAA---------------------------------------------------------------------------------------------------------------------------ATATTAAATCAATAAAAAAAACGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATTTA-TTAA-AGTAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTTTA--------------------------------------------
droSim2 2l:20901370-20901572 - ATATATATATATATATATAC-----ATT-TTA-----------TATATATA----------------------------------------------------------------------------------------------------TTC-T-----------------CG-------------------------------------------------------------------------ATTTAA------------------ATATAGAGAATACATA-----TATTA--------------GTGAA-TAAATTATT-ATTTGTTTGTCCAAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAACCACAATAAGCTTTAAATAGTATTACTTTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCCTACTTAATCCATATGAATTTTG-TTGGTAAT----------------------------------------------CTACCCTTCTAATTAC-ATTTG---------CTTTT--------------------------------------------
droSec2 scaffold_28:105278-105502 - ATATATATATATATATATAT-----AT--ATA-----------TATT-ATA---------------------------------------------------------------------------------------------------TTATATA---------------------------------------------------------TATATAT-TATATAT----------ATATTCTCGATTTAA------------------ATATAGAGAATACATA-----TATTA--------------GTGAA-TAAATTATT-ATTTGTTTGTCCAAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAACCACAATAAGCTTTAAATAGTATTACTTTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCCTACTTAATCCATATGAATTTTG-TTGGTAAT----------------------------------------------CTACCCTTCTAATTGC-ATTTG---------CTTTT--------------------------------------------
droYak3 2L:16860980-16861160 + GAATACTTATAGATACCTCT-----GC--AAG-----------TGTTTTGA------------------------------------------------A---------------------------------------------------TATTAA-TTGATTCATATACCGAA--A------TATAGAATTGATAAAATAAGTAAAGTCATGTAC--AA----------CAAGGCGT-------------------------------------------------------------------------------------------TT-----------------------------TGT------------------------------------GGAAATTACCAACTTCCCAGTAGCTAATTTGAAGTCTATTGAAATA-CAGTCGGGAAA---------------------------------------------------------------------------------------------TGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA---------------------------------------------AATTA---------CGAGT--------------------------------------------
droEre2 scaffold_4929:26144956-26145179 + ATATATATATATATATATAT-----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------TATATA---------------------------------------------------------TAT--ATATATATAT----------ATA------ATATAT--AT----A------TATATATAT-------ATATAATATA-------------------------------TAATATTATAAATA------------------------------TTTATACGCTGTTCCTACTAATTTAAA---AGACCTCATTTACTTCG--TTTAATAATTCTTAGTCCATTGATTTTCCGTATTAGTTTCTCAACTAAATATTGAATTTCGGGTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG---------------------GG-----AAAACTTTTG--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATATATATATATATATATAT-----AT--AAGAGTTTCCTAA-----------CT----------------------------------------------------------------------------TATATATAGAAA--------TG--T-----------------TAATATATATATATGGAATATA--------------------------------------------------------------------------------TA----------------CATTA-----------------AA-CAAGTA-AGAACGTTGCAGTCA------------------------------GGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCAAC---------------------------------------------------------TGCAGAGT-------------------ACTCATTCACAT--------------------------------------------C--------------------------CCA-----------------------------------TCAGCAATTTAATAGCTAAAATTAC--------------TAGTAACTCAACCCTCCAAATTTG-ATTTGATTCTAGCT-CTTAAACTCTAGGAGATTTAAACTTTTGCGGTTTGCCACGGCCCTTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................GCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCAAC---------------------------------------------------------TGCAGAGT-------------------ACTCATT.................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................GCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCAAC---------------------------------------------------------TGCAGAGT-------------------ACTCAT..................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCAAC---------------------------------------------------------TGCAGAGT-------------------ACTCA...................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................AAGTA-AGAACGTTGCAGTCA------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.......................................................................................................................................................................................................................................................................................................TTA-----------------AA-CAAGTA-AGAACGTTGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droVir3
ATATACATATACATATACAT-----AT--ACA-----------TATACATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TAC--ATATACATATACAT---------------------ATA------------CATATACAA-------ACATTACACATT------ACACTTAAAGTAAAACAAGTA-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCGACAAGGGGATACCCTGAACCCTCT--TCTTCCAACATCAAAAGCATATATATATTCTATTTTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--GACTCTAGCT-CTTA--------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GACTCTAGC..................................................26202.85570000000000000000000000005700000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--G..........................................................25200.6012000060000000000000000000000006000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................A-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT..................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000000000000000000000000000000000000000000000000050
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GACT.......................................................21200.153000000000000000000000000300000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--GA.........................................................27200.153000010000000000000000000000002000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTTG-GT--GACTCTAGCT-C...............................................21200.153000000000000000000000000000030000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--TCTTCCAACATCAAAAGCATATATAT..........................................................................................................................................................................................................................................................................................2990.111000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATATG----------------------TCAAGTTTG-GT--GACTCTAGC..................................................27200.102001000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTTG-GT--GACTCTAGCT-................................................21200.102000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGGGATACCCTGAACCCT........................................................................................................................................................................................................................................................................................................................22160.061000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGGGATACCCTGAACCC.........................................................................................................................................................................................................................................................................................................................21190.051001000000000000000000000000000000000000000000000000000000000000
............ATATACAT-----AT--ACA-----------TATACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--...........................................................24200.051000000000000000000000000000000000010000000000000000000000000000
...TACATATACATATACAT-----AT--ACA-----------TAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TATACATATACAT---------------------ATA------------CATATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACCCTGAACCCTCT--TCT.................................................................................................................................................................................................................................................................................................................20200.051000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................C--ATATACATATACAT---------------------ATA------------CAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................TA---------------------------------------------------------TAC--ATATACATATACAT---------------------ATA------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................TATACATATACAT---------------------ATA------------CATAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GA.........................................................19200.051000000100000000000000000000000000000000000000000000000000000000
...............................................CATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TAC--ATATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000000000000000000000000000000000000000000000000000000000000
......ATATACATATACAT-----AT--ACA-----------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATATTCTATTTTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATA.................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................CATA---------------------------------------------------------TAC--ATATACATATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TA---------------------------------------------------------TAC--ATATACATATACAT---------------------AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ACAAGTA-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT..................................................................................................................................................................................................................................................................................................................................................27200.051100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCG..............................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
..................AT-----AT--ACA-----------TATACATA----------------------------------------------------------------------------------------------------TACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-GT--GA.........................................................25200.051000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTT..................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GACTCTA....................................................24200.051000000000000000000000000000000000000000100000000000000000000000
..............................CA-----------TATACATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000000000000000000000000000000000000000000000000000000000000
ATATACATATACATATACAT-----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GACTC......................................................22200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TA-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC.................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT..................................................................................................................................................................................................................................................................................................................................................20200.051000000010000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GACTCTAGCT-C...............................................28200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TA-AG-AGGTTCTAGTCG------------------------------GGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCGA.............................................................................................................................................................................................................................................................................................................................................27200.051000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATATG----------------------TCAAGTTTG-G..............................................................21200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATG----------------------TCAAGTTTG-GT--GAC........................................................20200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................C--ATATACATATACAT---------------------ATA------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTTG-GT--GACTCTAGCT-C...............................................22200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................CATATACAT---------------------ATA------------CATATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000000000000000000000000000000000000000000000000000000000000
droGri2
ACGCAAATGCATATAAATAT-----AT--ATA-----------TATACAGATATATACAGAT-------------------------------------------------------------------------------------------------------------------A------TATATATTATA--------------------------------------------------------------------------------TA----------------CAGTA-----------------AA-CAAGTT-AGAATGCTACAGTAG------------------------------AGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTCGAC---------------------------------------------------------TTTCCGAT-------------------ACTCTGTTAAATGTTTAGCATGCTTAATTGTGGCAGTTATCGATAAATGAAATCAGCTTGATCTGCTTTTTGTAGATGA---------------------------------------------------------A------AACTTTTGTTCCAAATTGAATGT-------TTCTGGTTTGC-AACAG---------CTTTT------------------------------------------GASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATGTATATATATATGTATGT-----AT--ATA-----------CATATATA----------------------------------------------------------------------------------------------------TGTATG---------------------------------------------------------TGT--GTGTGGGTGT-TAC---------------------ATATAAGTACATGT----ATATA---AATAAATA-----TAATA--------------ATGTT--------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------ACATTACACAATT-TAGAAACACTC--------------------------------ACGTCGACAAATCACGTCAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACATTC-------------------------CAA--------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................271912.0022842081150
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCACGT...................................................................................................................................................................................................28194.5887178170
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................26190.5310010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACACTC--------------------------------ACGTCGACAAATCACGT...................................................................................................................................................................................................27190.32606000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCA......................................................................................................................................................................................................25200.25503020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCAC.....................................................................................................................................................................................................26200.15303000
...............................................TATA----------------------------------------------------------------------------------------------------TGTATG---------------------------------------------------------TGT--GTGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT-TAGAAACACTC--------------------------------ACGTCGACAAAT........................................................................................................................................................................................................27190.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACACTC--------------------------------ACGTCGACAAATCACGA...................................................................................................................................................................................................27190.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCACGTC..................................................................................................................................................................................................29190.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGAAACACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................28190.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACA...........................................................................25200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACTC--------------------------------ACGTCGACAAATCACGT...................................................................................................................................................................................................25200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGAAACACTC--------------------------------ACGTCGACA...........................................................................................................................................................................................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................18200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................20200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACAT..........................................................................22200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGAAACACTC--------------------------------ACGTCG..............................................................................................................................................................................................................18200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACAT..........................................................................27200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACAT..........................................................................28200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................21200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACA...........................................................................26200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACAT..........................................................................25200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATC.......................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACACTC--------------------------------ACGTCGACAAATCAC.....................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAC-------------------------ATAAATG-----------------------------------------------CCAAAAAAAT----------------------................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACACTC--------------------------------ACGTCGACAAATCACGTT..................................................................................................................................................................................................27200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTC--------------------------------ACGTCGACAAATCACG....................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAACACTC--------------------------------ACGTCGACAAATCACA....................................................................................................................................................................................................27200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATG-----------------------------------------------CCAAAAAAAT----------------------CTACATTC-------------------------CA.............................................26200.05101000
dp5
ACATATATATATATATATAT-----ATA-ATA-----------TATATATA--TT----------------------------------------------------------------------------TATATATA----------------------TTATGT------AGATAT------ATAG--------------------------------------AC----------ATA------ATGTAA------------------ATATAT---------------------------------------------A-G---------------AGGTACCCAAAAAAGATATTTATAGTGCATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACCTAT---------------------------------------------------------TATAAAAC-------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---------TCACA--------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATATACATATATATACATAT-----AT--ATA-----------CATATATA----------------------------------------------------------------------------------------------------TACATA---------------------------------------------------------TAT--ATACATATATATAC---------------------ATAT----ATATACATATATATA-------------------------------------------AATA-AGA---------------TTGTCCGATTCGGTCATCAA------------------------------------------------------------------------------------------------------------TGCAAAGC-----------------------------------------------------------------------GCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------------------------------------CTC--------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAATATATATATATAACTATT----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------CC--T-----------------AAA--------------------------------------AAG--AAAG-------------------------------------------------------------------------------------------------------------TCAAGCAG------------------------------AATA-----------------------TAA--------------------------------------------------------------------------------------TTA-ACAGAATATGTCAGATGTAAAACACAAGTAAGAACAATTTCCGTAATCAGTGTGGCGAGTAGTTAAC---------------------------------------------------------TTTC------------------------------------------------------------------------------------------------------------------------------------------TGA-AGTCAGTAATCTGATAACTAGAGTCTG--------------TAATA------------------------------------ACT--------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTAAC---------------------------------------------------------TTTC------------------------------------------------------------------------------------------------------------------------------------------TGA-AGTCAGTAATCT.....................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCTGATAACTAGAGTCT.......................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGATGTAAAACACAAGTAAGAAC............................................................................................................................................................................................................................................................................................................................................................................2711.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCAGTGTGGCGAGTAGT................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------TTTC------------------------------------------------------------------------------------------------------------------------------------------TGA-AGTCAGTAATCTG....................................................................................................................2111.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCAGATGTAAAACACAAGT..................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAATCAGTGTGGCGAGT...................................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
ATATATACATATATACATAT-----AT--ACA-----------TATATACATATATACATATATACATATTAATTAATAATTAATAATTAATACAC----------------------------------------------------------TGGTGCCCAAGCCCAGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAGCGAGTTCTTTT-CCACAAT-----------------------------------------------------AC------ACA--AAAATTT------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA---------------------------------------------------------AAAA-----T-ATTGATCCTAATTTAACA------------------------------------CTC--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATATATAAATAAATGTATATTCTCAGT--AATCAGT--------------------------------------------------------AATCTGATTTTTACGACTTAAATGTAATAT----------------AGAAA--------TGT---------------------------------TTTGTATA-------------------------TAT---------------------------------------------AGAAAAATA-------------------------------------------AATC-AGA---------------TAGTCCCACGAAAGTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAATTTAT--TATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAATAAAATAAATAAAATAAA--------------T---AA-TTAAATATTCAAGTTT------------------AAT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATATATATATATATATATACT----ATATAGGAGTAGTATATATATATATA----------------------------------------------------------------------------------------------------TA-------------------------------------------------------------------TATATATATATAT---------------------ATAT----ATATATATATATATAC-------ATA---------T-----------------AA-CGAATT-TGAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATATATATATATATATATAT-----TT--ATATATT--T--------TATA----------------------------------------------------------------------------------------------------TATATA---------------------------------------------------------TAT--ATATATTTATATAT---------------------ATAT----ATATACATATATATAC-------ATA-----TGG-GACGTTTC--------------------AC-GTCAACCGGCCCAGAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACCATATTGGGT-------------------------------------------------------------------------------------C--------------------------------------------C-------------------------GCCATTTTGAATTTTAAAAATCTGACTTCAGATTCGTAATCAGCAACCTCAAAACTATAAAAAT-----------------------------------------CAG---------TCATT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATATATACATACAAATATAC-----AT--AAG-----------TATAAATA----------------------------------------------------------------------------------------------------TAC-----------------------------------AATATA--------------------------------------------------------------------------------CA----------------CATAA-----------------AA-CAAGAG-AGAACGCTATAGTCG------------------------------GGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CCCGAC---------------------------------------------------------TATCAGAT-------------------ACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATATATATATATATATATAT-----GC--AGAGGGT--------------------------------------------------------ACTTTGATTTCAGTCAGAAGTTTGTGACGCAGTAAAGTATATATATATATA--------TA--T-----------------AAATAGATAT--A----------------------------TAT--GA----------ATATATTT-------------------------------------------------------AT-----------------------------------------------------------------AGC------------------------------------AGAACTCATTTGAATCC--TT-AATTAGACTTAAAAGATTAATTTA-TATTTAAGGAA---------------------------------------------------------------------------------------------CTCAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-----------------------------------TT-----------------AATT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATATATATATGTATATATAT-----AT--ATG-----------TATATATA----------------------------------------------------------------------------------------------------TATATG---------------------------------------------------------TAT--ATATATATATGTAT---------------------ATAT----ATATATGTATATATAC-------ATA-----TAT-G--------------ATT---------------TT-----------------------------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAA------------------------------------------------------------CGTT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTATATATTTTTTTATAGCA-----AT--GAAAGCTGCCCAA----------------------------------------------------------------------------------TTAGCCATGTACATACGTATGTGAGAGTATATA---------------------------------------------------------GAC--AC----------ATATAGATATG------ACAGAG------------------ATATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGGGAGGCGTG----------------------------TGG-AGTGAGT------------------AT----------------CCA------------------------------------CAT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATATATATATATATATATAT-----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------AACTAAAACCTTACGTAAACAT------------AAAAAAGATG--------------------------------------------------------------------------------TT----------------CACAA-----------------AA-TACACA-AAAAAGGTTAAATCA------------------------------AATA-----------------------TAA--------------------------------------------------------------------------------------TTACACAAAAA---------------------------------------------------------------------------------------------------------------------------ATATTAAATCAATAAAAAAAACGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATTTA-TTAA-AGTAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTTTA--------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------.................................................2529.501900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120601000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TT...............................................2727.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------T................................................2624.5090000000000000000000000000000010000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000020300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CCTTACGTAAACAT------------AAAAAAGATG--------------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-AGTAAAT--------------------------------------AC-------CTTCAAATTTAAAT.............................................................2623.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTTT.............................................2523.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTTTA--------------------------------------------2622.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAT--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTT..............................................2822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TTT..............................................2422.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATT.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TAAAACCTTACGTAAACAT------------AAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2522.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTAA-AGTAAAT--------------------------------------AC-------CTTCAAATTTA................................................................2622.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAAAACGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATT.........................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTAAATCA------------------------------AATA-----------------------TAA--------------------------------------------------------------------------------------TTACAC.............................................................................................................................................................................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAATTTAAATTCCA--------TTTT.............................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AGTAAAT--------------------------------------AC-------CTTCAAATTTA................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------AC-------CTTCAAATTTAAATTCCA--------TT...............................................2321.5030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA-TTAA-AGTAAAT--------------------------------------AC-------CTTCAAATT..................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAAATCAATAAAAAAAACGTG--------------------------------AC---------------------------------------------------------------A..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GATG--------------------------------------------------------------------------------TT----------------CACAA-----------------AA-TACACA-AAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TG--------------------------------------------------------------------------------TT----------------CACAA-----------------AA-TACACA-AAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACACA-AAAAAGGTTAAATCA------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAT--------------------------------------AC-------CTTCAAATTTAAA..............................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TACACA-AAAAAGGTTAAATCA------------------------------AATA-----------------------TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAATTTA-TTAA-AGTA.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................T--ATA-----------TATATATA----------------------------------------------------------------------------------------------------AACTAAAACCTTACGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATTTA-TTAA-AGT..............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................CTTACGTAAACAT------------AAAAAAGATG--------------------------------------------------------------------------------TT----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTG--------------------------------AC---------------------------------------------------------------ATAAAGAATTTA-......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
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.......TATATATATATAT-----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATATATATATATATATATAC-----ATT-TTA-----------TATATATA----------------------------------------------------------------------------------------------------TTC-T-----------------CG-------------------------------------------------------------------------ATTTAA------------------ATATAGAGAATACATA-----TATTA--------------GTGAA-TAAATTATT-ATTTGTTTGTCCAAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAACCACAATAAGCTTTAAATAGTATTACTTTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCCTACTTAATCCATATGAATTTTG-TTGGTAAT----------------------------------------------CTACCCTTCTAATTAC-ATTTG---------CTTTT--------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATTTTG-TTGGTAAT----------------------------------------------C...............................................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--------------------------------------------C-------------------------GTCATTGCCTACTTAATCC...................................................................................................................................................2211.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCC.............................................................................................................................................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCCTACTTAATC....................................................................................................................................................2511.00100000010000000000
droSec2
ATATATATATATATATATAT-----AT--ATA-----------TATT-ATA---------------------------------------------------------------------------------------------------TTATATA---------------------------------------------------------TATATAT-TATATAT----------ATATTCTCGATTTAA------------------ATATAGAGAATACATA-----TATTA--------------GTGAA-TAAATTATT-ATTTGTTTGTCCAAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAACCACAATAAGCTTTAAATAGTATTACTTTT----------------------------------------------------------------CAT--------------------------------------------C-------------------------GTCATTGCCTACTTAATCCATATGAATTTTG-TTGGTAAT----------------------------------------------CTACCCTTCTAATTGC-ATTTG---------CTTTT--------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GAATACTTATAGATACCTCT-----GC--AAG-----------TGTTTTGA------------------------------------------------A---------------------------------------------------TATTAA-TTGATTCATATACCGAA--A------TATAGAATTGATAAAATAAGTAAAGTCATGTAC--AA----------CAAGGCGT-------------------------------------------------------------------------------------------TT-----------------------------TGT------------------------------------GGAAATTACCAACTTCCCAGTAGCTAATTTGAAGTCTATTGAAATA-CAGTCGGGAAA---------------------------------------------------------------------------------------------TGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA---------------------------------------------AATTA---------CGAGT--------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
ATATATATATATATATATAT-----AT--ATA-----------TATATATA----------------------------------------------------------------------------------------------------TATATA---------------------------------------------------------TAT--ATATATATAT----------ATA------ATATAT--AT----A------TATATATAT-------ATATAATATA-------------------------------TAATATTATAAATA------------------------------TTTATACGCTGTTCCTACTAATTTAAA---AGACCTCATTTACTTCG--TTTAATAATTCTTAGTCCATTGATTTTCCGTATTAGTTTCTCAACTAAATATTGAATTTCGGGTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG---------------------GG-----AAAACTTTTG--------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCTTAGTCCATTGATTTTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0022000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTGATTTTCCGTATTAGTTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTCGGGTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG---------------------GG-----AAAACT........................2720.5011000000
..............................................................................................................................................................................................................................................................................................................................................TAAATA------------------------------TTTATACGCTGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0511000000

Generated: 05/18/2015 at 12:08 AM