ID:

dmo_13

 Coordinate:

scaffold_6540:6632481-6632543 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.8 -34.7 -34.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACAAATAATAGCAATAAAAGTCTATATGAAATAAATTTTATATGACATAATTCGTACGTTACACTGAACAGATTTGTGTACGAATGCTCTGTTCAGTGCGATGTGTGAATCATGTATGTAAAAAGAGGCAGCGAAGATGAATGTGAAGTGCTGGATGTTAAAT

***********************************(((((((((.(((.(((((((((((.(((((((((((((((....))))...))))))))))).))))))))))).))))))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 M060

embryo

 V041

embryo

 V056

head

 V049

head
...........................................................................................TTCAGTGCGATGTGTGAATCA................................................... 21 0 1 7473.00 7473 7298 48 9 65 32 21
..................................................TTCGTACGTTACACTGAACAGA........................................................................................... 22 0 1 1269.00 1269 1081 63 83 15 18 9
.................................................ATTCGTACGTTACACTGAACAGA........................................................................................... 23 0 1 1038.00 1038 860 72 70 11 19 6
..........................................................................................GTTCAGTGCGATGTGTGAATCA................................................... 22 0 1 758.00 758 739 7 0 4 5 3
.......................................................................................................................................GATGAATGCTAAGTGTTGGA........ 20 3 11 609.82 6708 6363 328 0 0 11 6
.................................................ATTCGTACGTTACACTGAACA............................................................................................. 21 0 1 524.00 524 429 57 22 10 4 2
...........................................................................................TTCAGTGCGATGTGTGAAT..................................................... 19 0 1 426.00 426 419 1 0 1 2 3
.................................................ATTCGTACGTTACACTGAACAG............................................................................................ 22 0 1 344.00 344 280 31 24 1 5 3
.........................................................................................TGTTCAGTGCGATGTGTGAATCA................................................... 23 0 1 327.00 327 289 16 2 9 7 4
...........................................................................................TTCAGTGCGATGTGTGAATCAA.................................................. 22 1 1 306.00 306 302 1 1 1 0 1
.........................................................................................TGTTCAGTGCGATGTGTGAAT..................................................... 21 0 1 258.00 258 247 4 0 2 1 4
.........................................................................................TGTTCAGTGCGATGTGTGAATC.................................................... 22 0 1 202.00 202 135 5 49 9 3 1
...........................................................................................TTCAGTGCGATGTGTGAATC.................................................... 20 0 1 159.00 159 150 6 2 0 1 0
..................................................TTCGTACGTTACACTGAACAG............................................................................................ 21 0 1 110.00 110 86 16 4 1 1 2
...........................................................................................TTCAGTGCGATGTGTGAATCAT.................................................. 22 0 1 99.00 99 99 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAA...................................................... 20 0 1 91.00 91 82 3 0 0 3 3
...........................................................................................TTCAGTGCGATGTGTGAATCC................................................... 21 1 1 53.00 53 53 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCT................................................... 21 1 1 52.00 52 50 0 0 0 2 0
...........................................................................................TTCAGTGCGATGTGTGAAA..................................................... 19 1 1 27.00 27 27 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAAC.............................................................................................. 20 0 1 24.00 24 10 9 4 1 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCT................................................... 23 1 1 23.00 23 23 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCAA.................................................. 24 1 1 21.00 21 20 1 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAATC.................................................... 21 0 1 17.00 17 15 1 1 0 0 0
...........................................................................................TTCAGTGCGATGTGTTAATCA................................................... 21 1 1 17.00 17 15 0 1 0 0 1
..................................................TGCGTACGTTACACTGAACAGA........................................................................................... 22 1 1 15.00 15 0 0 15 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCC................................................... 23 1 1 15.00 15 13 0 2 0 0 0
............................................................................................TCAGTGCGATGTGTGAATCA................................................... 20 0 1 13.00 13 7 6 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGAA.......................................................................................... 24 1 1 13.00 13 10 2 1 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGA....................................................... 19 0 1 11.00 11 10 0 0 0 1 0
...................................................TCGTACGTTACACTGAACAGA........................................................................................... 21 0 1 11.00 11 1 9 0 0 0 1
...........................................................................................CTCAGTGCGATGTGTGAATCA................................................... 21 1 1 11.00 11 11 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCATC................................................. 23 1 1 11.00 11 11 0 0 0 0 0
.........................................................................................TTTTCAGTGCGATGTGTGAATC.................................................... 22 1 1 10.00 10 0 0 10 0 0 0
...........................................................................................TTCAGTGCGATGTGTAAATCA................................................... 21 1 1 10.00 10 10 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACAGAA.......................................................................................... 23 1 1 9.00 9 7 2 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTC.................................................. 22 2 1 9.00 9 9 0 0 0 0 0
.................................................AGTCGTACGTTACACTGAACAGA........................................................................................... 23 1 1 9.00 9 0 0 9 0 0 0
.................................................ATTCGTACGTTACACTGAACAA............................................................................................ 22 1 1 9.00 9 7 1 1 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCAG.................................................. 22 1 1 9.00 9 9 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGGATCA................................................... 21 1 1 8.00 8 8 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGT........................................................................................... 23 1 1 8.00 8 4 1 3 0 0 0
..................................................TTCGTACGTTACACTGAACA............................................................................................. 20 0 1 8.00 8 4 2 0 1 1 0
...........................................................................................TTCATTGCGATGTGTGAATCA................................................... 21 1 1 7.00 7 7 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAAA..................................................... 21 1 1 7.00 7 7 0 0 0 0 0
.................................................AGTCGTACGTTACACTGAACAG............................................................................................ 22 1 1 6.00 6 0 0 6 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAGTCA................................................... 21 1 1 6.00 6 6 0 0 0 0 0
..................................................TTAGTACGTTACACTGAACAGA........................................................................................... 22 1 1 6.00 6 1 0 5 0 0 0
...........................................................................................TTCAGTGCGATGTTTGAATCA................................................... 21 1 1 6.00 6 5 0 0 1 0 0
.................................................ATTCGTACGTTACACTGAACAGAT.......................................................................................... 24 0 1 6.00 6 6 0 0 0 0 0
...........................................................................................TTCAGTGCGATGCGTGAATCA................................................... 21 1 1 6.00 6 5 0 0 0 1 0
...........................................................................................TTCAGTGCGGTGTGTGAATCA................................................... 21 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTATGAATCA................................................... 21 1 1 6.00 6 6 0 0 0 0 0
.................................................ATTTGTACGTTACACTGAACAGA........................................................................................... 23 1 1 6.00 6 1 0 5 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCATT................................................. 23 1 1 5.00 5 5 0 0 0 0 0
.......................................................................................................................................GATGAATGTTAAGTGTTGGA........ 20 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATAA................................................... 21 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TTCAGTGCGATTTGTGAATCA................................................... 21 1 1 5.00 5 5 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAATCAA.................................................. 23 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TTCAGCGCGATGTGTGAATCA................................................... 21 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCAC.................................................. 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTA................................................... 21 1 1 5.00 5 5 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGC........................................................................................... 23 1 1 5.00 5 4 0 1 0 0 0
...........................................................................................TTTAGTGCGATGTGTGAATCA................................................... 21 1 1 5.00 5 5 0 0 0 0 0
.......................................................................................................................................GATGAATGCTAAGTGCTGGA........ 20 2 2 4.50 9 9 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAAT..................................................... 20 0 1 4.00 4 4 0 0 0 0 0
...........................................................................................TTCAGTGTGATGTGTGAATCA................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.................................................AGTCGTACGTTACACTGAAC.............................................................................................. 20 1 1 4.00 4 0 0 4 0 0 0
.................................................ATTCGTACGTTACACTGAAA.............................................................................................. 20 1 1 4.00 4 3 0 0 0 1 0
...........................................................................................TTCAGTGCGATGTGTGAATCAAA................................................. 23 2 1 4.00 4 4 0 0 0 0 0
..................................................TTCGTACTTTACACTGAACAGA........................................................................................... 22 1 1 4.00 4 2 0 2 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAACCA................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.................................................ATTCGTACGTTACACTGGACAGA........................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TTCAGTGCTATGTGTGAATCA................................................... 21 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCCC.................................................. 22 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................TTCAGTGCGATATGTGAATCA................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACAGT........................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATA.................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGCGAATCA................................................... 21 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................ATCAGTGCGATGTGTGAATCA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACAGAAA......................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................TTCGTACGTTACACTTAACAGA........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAA............................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0
...........................................................................................TTCAGTGCGACGTGTGAATCA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TTCAGTACGATGTGTGAATCA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCAAAA................................................ 24 3 1 3.00 3 3 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGAAA......................................................................................... 25 2 1 3.00 3 2 1 0 0 0 0
.................................................AGTCGTACGTTACACTGAACA............................................................................................. 21 1 1 3.00 3 0 0 3 0 0 0
...........................................................................................TCCAGTGCGATGTGTGAATCA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGT....................................................... 19 1 1 3.00 3 3 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACAGC........................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATT.................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.................................................ATTCGTACGTTACGCTGAACAGA........................................................................................... 23 1 1 3.00 3 1 1 0 0 1 0
...........................................................................................TTCAGTGCGATGTGTGAATA.................................................... 20 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATT.................................................... 20 1 1 3.00 3 3 0 0 0 0 0
.................................................ATTCGTACGTTACACTGCACAGA........................................................................................... 23 1 1 2.00 2 1 0 0 0 0 1
..................................................TTCGTACGTTACACTGAATAGA........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................GTACGTTACACTGAACAGA........................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCATTGCGATGTGTGAAT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCAAA................................................. 25 2 1 2.00 2 2 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCTCC................................................. 25 3 1 2.00 2 2 0 0 0 0 0
.........................................................................................TGTGCAGTGCGATGTGTGAATC.................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..............................................................................................AGTGCGATGTGTGAATCA................................................... 18 0 1 2.00 2 2 0 0 0 0 0
.................................................ATCCGTACGTTACACTGAACA............................................................................................. 21 1 1 2.00 2 0 0 2 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCAAAAA............................................... 27 3 1 2.00 2 2 0 0 0 0 0
.........................................................................................TTCTCAGTGCGATGTGTGAATC.................................................... 22 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................GTTCAGTGCGATGTGGGAATCA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCACTGCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GTTCAGTGCGACGTGTGAATCA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTCGTACGTTACACTGAAC.............................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0
..................................................TTCGTACGTTACATTGAACAGA........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................................................TTCAGGGCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTC................................................... 21 2 1 2.00 2 2 0 0 0 0 0
.................................................ATTCGTACGTTACACTGACCAG............................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAATCT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTAAGTGCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTCCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACT............................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAAC..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GTTCAGTGCGATTTGTGAATCA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTCGTACGTTACCCTGAACAGA........................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
...........................................................................................TTCGGTGCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTTCGATGTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGTC.......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
.................................................ATCCGTACGTTACACTGAACAG............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAACCA................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTTAATCA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTGTACGTTACACTGAACAGA........................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.................................................ATTCGTACGTTACACTGAACAC............................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
.................................................ATTCTTACGTTACACTGAACAGA........................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................................................GATGAATGCTAAGTGTTGGATG...... 22 3 2 2.00 4 4 0 0 0 0 0
..................................................TTCGTACGTTCCACTGAACAGA........................................................................................... 22 1 1 2.00 2 0 0 1 1 0 0
..........................................................................................GGTCAGTGCGATGTGTGAATC.................................................... 21 1 1 2.00 2 0 0 2 0 0 0
.................................................ATTTGTACGTTACACTGAACAG............................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TTCTTACGTTACACTGAACAGA........................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTAAATCA................................................... 23 1 1 2.00 2 0 0 0 2 0 0
...........................................................................................TTCAGTGCGATGTGTGTATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGGGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCACT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAATCG................................................... 22 1 1 2.00 2 1 0 0 1 0 0
.........................................................................................TGTTCAGTACGATGTGTGAATCA................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTCC................................................. 23 3 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTTCAGTGCGATGTGTGAATCA................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................................................TTCAGTGCGATCTGTGAATCA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................GTCAGTGCGATGTGTGAATCA................................................... 21 1 1 2.00 2 1 0 0 0 0 1
.................................................ATTCGTACGTTACACTGAACAGATT......................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTTCACTGAACA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAAAA.................................................... 20 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCATAA................................................ 24 2 1 1.00 1 1 0 0 0 0 0
................................................CATTCGTACGTTACACTGAAC.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................GCTCAGTGCGATGTGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAACC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCATACGTTACACTGAACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTCAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTAGGTTACACTGAACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTGCGTTACACTGAACA............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCTTA................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................CTCAGTGCGATGTGTGAATCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCTTACGTTACACTGAACA............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTCGTACGTTGCACTGAACAG............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
.................................................ATTCGTACGTTACACTGAGCAG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCAATGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATTTGTGAAT..................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTTTC................................................ 24 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTTTTAGTGCGATGTGTGAATC.................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.................................................AGTCGTACGTTACACTGAACAGAA.......................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAA...................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGCGAATCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACC............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TTCAGTGCAATGTGTGAATCC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGGTACACTGAACA............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.................................................ATTCGTACGTTACACTGAAAA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTACACTGCACAGA........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TTCAGTGCGATGTGCGAATC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTGAGTGCGATGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTTAACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTACACTGAATAG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAATGCGATGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTG................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTACCCCGAACAGA........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................TGCAGTGCGATGTGTGAATCA................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................GTTCAGTGCGCTGTGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGAGCGATGTGTGAAT..................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGA....................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGTAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGGTGTGTGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCCT.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
......................................................................GATTTGTGTACGAATGCTC.......................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................CGTTCAGTGCGATGTGTGAATC.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTTAATC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGCGTGTATC.................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.........................................................................................TTTTCAGTGCGATGTGTGAATAAA.................................................. 24 3 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................ACGATGAATGCTAAGTGCTGGA........ 22 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGTGATGTGTGAATC.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................GTTCAGTGCGATGCGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGATCAGTGCGATGTGTGAATCA................................................... 23 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................CTCAGTGCGATGTGTGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TCCGTACGTTACACTGAACAGT........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................TTTCGTACGTTACACTGAACAGA........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TTCGTACGTTACACTGAACAA............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCAATC................................................ 24 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGGTCAGTGCGATGTGTGGAT..................................................... 21 2 1 1.00 1 0 0 0 0 0 1
.................................................ATTCGTACGTTACACTGAGCAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CTTCAGTGCGATGTGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTTAGTGCGATGTGTGAATCAT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCTGTGCGATGTGTGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTATGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTCACACTGAACAGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCCTACGTTACACTGAACAGA........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
...................................................TTTTACGTTACACTGAACAGA........................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACATA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCAGTGCGCTGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................GATTTGTGTACGAATGCTCTGTTCA.................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATTC................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTGCGTTACACTGAACAG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCTATGTGTGAATCT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CGTTCAGTGCGATGTGTGAATCA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTGCACTGAACAGA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................GTTCAGTTCGACGTGTGAATCA................................................... 22 2 1 1.00 1 0 0 0 0 0 1
...........................................................................................TTCAGTGCGATGTGTGATC..................................................... 19 2 2 1.00 2 2 0 0 0 0 0
...........................................................................................TTCAGTGCGATGAGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTAGACTGAACAG............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TTCAGTCCGATGTGTGAATC.................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.................................................ATTCGTGCGTTACACTGAACAGA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGATCA........................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTGTACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCCTACGTTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGTATCAT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTGCGTTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTAACACTGAACAGA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TTCGTACGTTACACTGAACAGAT.......................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCAGTACGATGTGTGAATC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACATA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGAGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGAACGTTACACTGAACAG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACATTGAACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTTGTACGTTAAACTGAACAG............................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................TGTTCGGTGCGATGTGTGAATC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGCGTGAATC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTCACACTGAACAGA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTGAATCAT.................................................. 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCCT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCCGTGCGATGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGAGCGATGTGTGAATCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGATA......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGCTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGTACGTTACACTGAACGGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................GATGAATGCGAAGTGTTGGA........ 20 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTGAACAGAAT......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..................................................TTCGGACGTTACACTGAACAG............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGTGATGTGTAAATCAA.................................................. 24 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTCGGTGCGATGTGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTAAACTGAACAG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTCTCT................................................ 24 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTTCTATGTGTGAATCA................................................... 23 2 1 1.00 1 0 0 0 0 0 1
...........................................................................................TTCAGTGCGTTGTGTGAATCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTTA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCATT................................................. 25 1 1 1.00 1 0 1 0 0 0 0
..................................................TTCGTAAGTTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1
...........................................................................................TTAAGTGCGATGGGTGAATCA................................................... 21 2 1 1.00 1 0 0 0 0 1 0
.................................................ATTCGTACGTTACACTGAACAGTCC......................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTTCGATGTGTGAATCA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTCCAGTGCGATGTGTGAATC.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TTTCAGTGCGATGTGTGAAT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGTGGTGGGAATCA................................................... 21 3 1 1.00 1 0 0 0 0 1 0
.........................................................................................TGTTCGGTGCGATGTGTGAATCA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTCCGATGTGTGAATC.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................GATGAATGCTAAGTGCTGGAGG...... 22 3 1 1.00 1 0 1 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGACTCA................................................... 23 1 1 1.00 1 0 0 0 0 0 1
...........................................................................................TTCAGTGAGATGTGTGAATCA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
..................................................TGCGTACGTTACACTGAACAG............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
.................................................ATTCGTACGTTACACTGAATAG............................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
.................................................ATTCGTACGTTACACTGAACACA........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCGCACGTTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCTGTGCGATGTGTGAATC.................................................... 20 1 1 1.00 1 0 0 1 0 0 0
.................................................ATTTGTACGTTACACTGAAC.............................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCTGTGCGATGTGTGAATCAT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTTCAGTGCGATGTGTAAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTTACAGTGCGATGTGTGAATC.................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTCGTACGTTTCACTGAACAGA........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGCTCAGTGCGATGTGTGAATC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATATGTGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATAAAA................................................. 23 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTGAATCAC.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TCCGTACGTTACACTGAACAGA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................GGTCAGTGCGATGAGTGAATCA................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTAGACTGAACA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATCTA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................ATTCCTACGTTACACTGAACA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGGATC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.................................................AGTTGTACGTTACACTGAACAGA........................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................GTTCAGTGTGATGTGTGAATCA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
................................................CATTCGTACGTTACACTGAACAG............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTACACTTAACA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGTTCAGTGCGATGTGTTA....................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.................................................ATTCGTACGTTCCACTGAACAGA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TTCAGTGCGATGTGTGAATTCTT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTTTCAGTGCGATGTGTGAATCC................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................TTCAGTGCGATGAGTGAAT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TTCAGTGCGATGTTTGAATCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

TGTTTATTATCGTTATTTTCAGATATACTTTATTTAAAATATACTGTATTAAGCATGCAATGTGACTTGTCTAAACACATGCTTACGAGACAAGTCACGCTACACACTTAGTACATACATTTTTCTCCGTCGCTTCTACTTACACTTCACGACCTACAATTTA

************************************(((((((((.(((.(((((((((((.(((((((((((((((....))))...))))))))))).))))))))))).))))))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:6632431-6632593 + dmo_13 confident ACAAATAATAGCAATAAAAGTCTATATGAAATAAATTTTATATGACATAATTCGTACGTTACACTGAACAGATTTGTGTACGAATGCTCTGTTCAGTGCGATGTGTGAATCATGTATGTAAAAAGAGGCAGCGA---AGATGAATGTGAAGTGCTGGATGTTAAAT
droVir3 scaffold_12855:6284783-6284905 + dvi-mir-9540 Known_mirbase -CAAATAGTTGGTG----------------------TTTACATTACATGATTCGTACGTTACACTGAACAGATTTCTACATTAATGATCTGTTCAATGGGATGTGTGAATTATGTGTGTAAAATATGGCAACTAGGAAAGTAAATG--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACAAATAATAGCAATAAAAGTCTATATGAAATAAATTTTATATGACATAATTCGTACGTTACACTGAACAGATTTGTGTACGAATGCTCTGTTCAGTGCGATGTGTGAATCATGTATGTAAAAAGAGGCAGCGA---AGATGAATGTGAAGTGCTGGATGTTAAATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................TTCAGTGCGATGTGTGAATCA......................................................2117473.0074734865213297298
..................................................TTCGTACGTTACACTGAACAGA..............................................................................................2211269.0012696315918831081
.................................................ATTCGTACGTTACACTGAACAGA..............................................................................................2311038.001038721161970860
..........................................................................................GTTCAGTGCGATGTGTGAATCA......................................................221758.0075874350739
.................................................ATTCGTACGTTACACTGAACA................................................................................................211524.0052457102422429
...........................................................................................TTCAGTGCGATGTGTGAAT........................................................191426.0042611320419
.................................................ATTCGTACGTTACACTGAACAG...............................................................................................221344.003443113524280
.........................................................................................TGTTCAGTGCGATGTGTGAATCA......................................................231327.00327169472289
...........................................................................................TTCAGTGCGATGTGTGAATCAA.....................................................221306.0030611101302
.........................................................................................TGTTCAGTGCGATGTGTGAAT........................................................211258.0025842410247
.........................................................................................TGTTCAGTGCGATGTGTGAATC.......................................................221202.00202591349135
...........................................................................................TTCAGTGCGATGTGTGAATC.......................................................201159.0015960012150
..................................................TTCGTACGTTACACTGAACAG...............................................................................................211110.0011016121486
...........................................................................................TTCAGTGCGATGTGTGAATCAT.....................................................22199.00990000099
.........................................................................................TGTTCAGTGCGATGTGTGAA.........................................................20191.00913033082
...........................................................................................TTCAGTGCGATGTGTGAATCC......................................................21153.00530000053
...........................................................................................TTCAGTGCGATGTGTGAATCT......................................................21152.00520002050
...........................................................................................TTCAGTGCGATGTGTGAAA........................................................19127.00270000027
.................................................ATTCGTACGTTACACTGAAC.................................................................................................20124.00249100410
.........................................................................................TGTTCAGTGCGATGTGTGAATCT......................................................23123.00230000023
.........................................................................................TGTTCAGTGCGATGTGTGAATCAA.....................................................24121.00211000020
..........................................................................................GTTCAGTGCGATGTGTGAATC.......................................................21117.00171000115
.........................................................................................TGTTCAGTGCGATGTGTGAATCC......................................................23115.00150000213
............................................................................................TCAGTGCGATGTGTGAATCA......................................................20113.0013600007
.................................................ATTCGTACGTTACACTGAACAGAA.............................................................................................24113.00132000110
.........................................................................................TGTTCAGTGCGATGTGTGA..........................................................19111.00110001010
...................................................TCGTACGTTACACTGAACAGA..............................................................................................21111.0011901001
...........................................................................................TTCAGTGCGATGTGTGAATCATC....................................................23111.00110000011
..................................................TTCGTACGTTACACTGAACAGAA.............................................................................................2319.009200007
...........................................................................................TTCAGTGCGATGTGTGAATCTC.....................................................2219.009000009
.................................................ATTCGTACGTTACACTGAACAA...............................................................................................2219.009100017
...........................................................................................TTCAGTGCGATGTGTGAATCAG.....................................................2219.009000009
.................................................ATTCGTACGTTACACTGAACAGT..............................................................................................2318.008100034
..................................................TTCGTACGTTACACTGAACA................................................................................................2018.008210104
.........................................................................................TGTTCAGTGCGATGTGTGAAA........................................................2117.007000007
.................................................ATTCGTACGTTACACTGAACAGAT.............................................................................................2416.006000006
...........................................................................................TTCAGTGCGATGTGTGAATCATT....................................................2315.005000005
..........................................................................................GTTCAGTGCGATGTGTGAATCAA.....................................................2315.005000005
...........................................................................................TTCAGTGCGATGTGTGAATCAC.....................................................2215.005000005
.................................................ATTCGTACGTTACACTGAACAGC..............................................................................................2315.005000014
..........................................................................................GTTCAGTGCGATGTGTGAAT........................................................2014.004000004
.................................................ATTCGTACGTTACACTGAAA.................................................................................................2014.004000103
...........................................................................................TTCAGTGCGATGTGTGAATCAAA....................................................2314.004000004
...........................................................................................TTCAGTGCGATGTGTGAATCCC.....................................................2214.004000004
..................................................TTCGTACGTTACACTGAACAGT..............................................................................................2214.004200002
.........................................................................................TGTTCAGTGCGATGTGTGAATA.......................................................2214.004000004
..................................................TTCGTACGTTACACTGAACAGAAA............................................................................................2413.003000003
.................................................ATTCGTACGTTACACTGAA..................................................................................................1913.003000003
...........................................................................................TTCAGTGCGATGTGTGAATCAAAA...................................................2413.003000003
.................................................ATTCGTACGTTACACTGAACAGAAA............................................................................................2513.003100002
.........................................................................................TGTTCAGTGCGATGTGTGT..........................................................1913.003000003
..................................................TTCGTACGTTACACTGAACAGC..............................................................................................2213.003000012
.........................................................................................TGTTCAGTGCGATGTGTGAATT.......................................................2213.003000003
...........................................................................................TTCAGTGCGATGTGTGAATA.......................................................2013.003000003
...........................................................................................TTCAGTGCGATGTGTGAATT.......................................................2013.003000003
.....................................................GTACGTTACACTGAACAGA..............................................................................................1912.002000002
.........................................................................................TGTTCAGTGCGATGTGTGAATCAAA....................................................2512.002000002
.........................................................................................TGTTCAGTGCGATGTGTGAATCTCC....................................................2512.002000002
..............................................................................................AGTGCGATGTGTGAATCA......................................................1812.002000002
..................................................TTCGTACGTTACACTGAAC.................................................................................................1912.002200000
...........................................................................................TTCAGTGCGATGTGTGAATTC......................................................2112.002000002
..........................................................................................GTTCAGTGCGATGTGTGAATCT......................................................2212.002000002
.................................................ATTCGTACGTTACACTGAACT................................................................................................2112.002000002
...........................................................................................TTCAGTGCGATGTGTGAAC........................................................1912.002000002
.................................................ATTCGTACGTTACACTGAACAGTC.............................................................................................2412.002000002
.................................................ATTCGTACGTTACACTGAACAC...............................................................................................2212.002000020
...........................................................................................TTCAGTGCGATGTGTGAATCACT....................................................2312.002000002
..........................................................................................GTTCAGTGCGATGTGTGAATCG......................................................2212.002010001
...........................................................................................TTCAGTGCGATGTGTGAATCTCC....................................................2312.002000002
.................................................ATTCGTACGTTACACTGAACAGATT............................................................................................2511.001000001
...........................................................................................TTCAGTGCGATGTGTGAAAA.......................................................2011.001000001
...........................................................................................TTCAGTGCGATGTGTGAATCATAA...................................................2411.001000001
...........................................................................................TTCAGTGCGATGTGTGAATTT......................................................2111.001000001
...........................................................................................TTCAGTGCGATGTGTGAA.........................................................1811.001000001
.................................................ATTCGTACGTTACACTGAACC................................................................................................2111.001010000
...........................................................................................TTCAGTGCGATGTGTGAATTG......................................................2111.001000001
..........................................................................................GTTCAGTGCGATGTGTGA..........................................................1811.001000001
......................................................................GATTTGTGTACGAATGCTC.............................................................................1911.001000010
..................................................TTCGTACGTTACACTGAACAA...............................................................................................2111.001100000
...........................................................................................TTCAGTGCGATGTGTGAATCAATC...................................................2411.001000001
......................................................................GATTTGTGTACGAATGCTCTGTTCA.......................................................................2511.001000001
.........................................................................................TGTTCAGTGCGATGTGTGAATTC......................................................2311.001000001
...........................................................................................TTCAGTGCGATGTGTGATC........................................................1921.002000002
.................................................ATTCGTACGTTACACTGAACAGATCA...........................................................................................2611.001000001
..................................................TTCGTACGTTACACTGAACAGAT.............................................................................................2311.001000010
..........................................................................................GTTCAGTGCGATGTGTGAATCAT.....................................................2311.001000001
.................................................ATTCGTACGTTACACTGAACAGATA............................................................................................2511.001000001
.........................................................................................TGTTCAGTGCGATGTGTGAATCATT....................................................2511.001100000
.................................................ATTCGTACGTTACACTGAACAGTCC............................................................................................2511.001000001
.........................................................................................TGTTCAGTGCGATGTGTGAATCAC.....................................................2411.001000001
...........................................................................................TTCAGTGCGATGTGTGAATCTA.....................................................2211.001000001
droVir3
-CAAATAGTTGGTG----------------------TTTACATTACATGATTCGTACGTTACACTGAACAGATTTCTACATTAATGATCTGTTCAATGGGATGTGTGAATTATGTGTGTAAAATATGGCAACTAGGAAAGTAAATG--------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................TTCGTACGTTACACTGAACAGA..............................................................................................22163312.0063312359743979301698102631249000013005264514212132312453851239761357114127102002470980000000010010111326212538020323213705460363634513113938
..................................................TTCGTACGTTACACTGAACAG...............................................................................................21113488.00134881736232904232431017000001000085211301102576229399427880568100031168000000000000000314000160000613691551112132
.......................................................................................TCTGTTCAATGGGATGTGTGA..........................................................21113473.00134732205041280841314752000001000020350040100172614325871763069800004200100000000000000000006071400001000000001001
.......................................................................................TCTGTTCAATGGGATGTGTGAA.........................................................2215825.005825774504601542917160000000000623002000179063323364502830000052200000000000000000000024300010040110100000
.......................................................................................TCTGTTCAATGGGATGTGTG...........................................................2015754.005754160307464222293740000000010120900100004555183168410274000009770000000000000000010006300000000000000001
..................................................TTCGTACGTTACACTGAACAGAA.............................................................................................2315476.00547620506008011901500000000103310000001119092045615580260100014000000000000000000010002300000100120020001
.........................................................................................TGTTCAATGGGATGTGTGAAT........................................................2114672.0046720030331021061184100000000043500000008647983439280238000003840000000000000000000007200000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATT.......................................................2212446.00244620602185148093000000000025100000004773911354330121000002350000000000000000001006300000000002000000
...................................................TCGTACGTTACACTGAACAGAT.............................................................................................221981.00981502002506050000000000730001000259191722420380000054000000000000000000000800000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGT..........................................................211974.009742000081074279000000000010600000007113154126070000001350000000000000000000004300000000000000000
.......................................................................................TCTGTTCAATGGGATGTGT............................................................191906.00906000007941006400000000001980000000528850129079000001320000000000000000000002100000000000000000
..................................................TTCGTACGTTACACTGAACAGAAA............................................................................................241871.008712202011007060000000000240000000181209982420201000043000000000000000000000000031000000000001
..................................................TTCGTACGTTACACTGAACA................................................................................................201848.0084815060014010400000000005210000001781577618005010001103000000000000000000000800000000000000010
.........................................................................................TGTTCAATGGGATGTGTGAA.........................................................201681.0068100001530260730000000000490000000891034610603800000780000000000000000000001800000000000000010
..................................................TTCGTACGTTACACTGAACAGG..............................................................................................221568.005685245000600000000000000110000000311405000008000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACAGA..............................................................................................211503.00503253110013020200000000003600000008788461120310000042000000000000000000000400000001000000000
.................................................ATTCGTACGTTACACTGAACAG...............................................................................................221497.00497330100120001000000000034000000012680381100160000036000000000000000002000500000002100000000
.................................................ATTCGTACGTTACACTGAACAGA..............................................................................................231489.0048937000080202000000000043000000010768251010360000045000000000000000001000700011002100100010
....................................................CGTACGTTACACTGAACAGATT............................................................................................221443.004436110080101000000000039000000010281401050150000041000000000000000000000200000000000000000
..................................................TTCGTACGTTACACTGAACAGC..............................................................................................221298.00298100101700010000000000114001000011540610000091000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTG.............................................................181253.00253100001705115000000000041000000024341956050000034000000000000000000000100000000000000000
.........................................................................................TGTTCAATGGGATGTGTGA..........................................................191236.0023600000240110250000000000360000000192015370150000027000000000000000000000700000000000000000
..................................................TTCGTACGTTACACTGAAC.................................................................................................191225.0022512050030100000000000090000000424621540171000013000000000000000000000000000000000000001
.........................................................................................TGTTCAATGGGATGTGTGAATTC......................................................231199.00199000002000000000000000180000000333310330200000027000000000000000000000500000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAAA........................................................231195.0019500010303014000000000023000000033281635090000025000000000000000000000500000000000000000
.....................................................GTACGTTACACTGAACAGA..............................................................................................191186.0018610000601000000000000330000000262311420120000031000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAA...............................................................................................211170.001705000020000000000000010000000039351548051000010000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGAAAA...........................................................................................251107.0010730000000020000000000000000002030103701000001000000000000000001010100000000000000000
...................................................TCGTACGTTACACTGAACAGATA............................................................................................23193.00937000010100000000000040000000301342401000008000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACAGATT............................................................................................23191.0091100002010000000000001100100001916421030000012000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGAT.............................................................................................23190.00902000020000000000000070000000221742704100004000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGC..........................................................21183.00830000015020000000000003300000004322040000017000000000000000000000100000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATC.......................................................22171.0071000001100100000000000800000009739050000013000000000000000000000500000000000000000
........................................................................................CTGTTCAATGGGATGTGTGAA.........................................................21168.006800000503010000000000050000000141021002000007000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAAT........................................................23166.0066000007010200000000003000000014741603000007000000000000000000000200000000000000000
.................................................ATTCGTACGTTACACTGAACA................................................................................................21166.00660010000000000000000050000000191610800000007000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGAT.............................................................................................21165.00651010030000000000000011000000013771701000003000000000000000000000100000000000000000
..................................................TTCGTACGTTACACTGAA..................................................................................................18165.0065000000000000000000003000000091681706000006000000000000000000000000000000000000000
.........................................................................................TGTTCAATGGGATGTGTG...........................................................18164.00640000030601100000000001500000004526020000010000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGG..........................................................21156.005670000602060000000000900000000103300000007000000000000000000010200000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATTA......................................................23155.0055000003000000000000004000000019921103000003000000000000000000000100000000000000000
...................................................TCGTACGTTACACTGAACAG...............................................................................................20154.005491200100000000000000600000009104902000001000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGA..............................................................................................20152.00520000000001000000000040000000121041503000003000000000000000000000000000000000000000
.....................................................GTACGTTACACTGAACAG...............................................................................................18150.005000100100000000000000700000008771302000004000000000000000000000000000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATTT......................................................23143.004300000101000000000000100000008351702000005000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACAGAA.............................................................................................22141.004100000200000000000000100000008611601000006000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGAC.............................................................................................23141.00412000010100000000000080000000741404000008000000000000000001000000000000000000000
..................................................TTCGTACGTTACACTGAACAGAG.............................................................................................23141.004150000100010000000000400000003921003000003000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACAGATC............................................................................................23141.00414000020000000000000040000000752903000003000000000000000000000100000000001000000
.........................................................................................TGTTCAATGGGATGTGTGAAA........................................................21139.0039000002000300000000001000000011231201000002000000000000000000000200000000000000000
..................................................TTCGTACGTTACACTGAACAGT..............................................................................................22137.003730000000000000000000800000001331004000004000000000000000001000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAC.........................................................22137.003700000501000000000000140000000310105000005000000000000000000000200000000000000000
.................................................ATTCGTACGTTACACTGAACAGAA.............................................................................................24135.00351000010000000000000030000000892701000002000000000000000000000100000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAAC........................................................23133.00330000150000000000000010000000432406000005000000000000000000000200000000000000000
.....................................................GTACGTTACACTGAACAGAA.............................................................................................20133.003300000000000000000000110000000561303000004000000000000000000000000000000000000000
........................................................................................CTGTTCAATGGGATGTGTGA..........................................................20130.00300010020301000000000020000000321801000004000000000000000000000200000000000000000
..................................................TTCGTACGTTACACTGAAA.................................................................................................19129.002910000100000000000000100000002451202000000000000000000000000000000000000010000000
..................................................TTCGTACGTTACACTGAACAC...............................................................................................21126.002619000000000000000000060000000000100000000000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAG.........................................................22124.00241000030601000000000030000000222200000002000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGA............................................................19124.00240000040001000000000080000000151400000000000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTT...........................................................20124.00240000030104000000000020000000111600000004000000000000000000000100000000000000000
...................................................TCGTACGTTACACTGAACAGATAA...........................................................................................24123.00231000000100000000000000000000554700000000000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACAGAAA............................................................................................23122.00221000000000000000000000000000742502000001000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAT.........................................................22120.00200000000001000000000030000000240600000002000000000000000000000200000000000000000
.................................................ATTCGTACGTTACACTGAAC.................................................................................................20119.00192000000000000000000020000000450500000000000000000000000000000000000000100000000
.........................................................................................TGTTCAATGGGATGTGTGAATA.......................................................22119.00190000010100000000000020000000440401000001000000000000000000000100000000000000000
..................................................TTCGTACGTTACACTGAACAGATTTCT.........................................................................................27118.00180000000000000000000000000000333801000000000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGCA.............................................................................................23117.00170000030000000000000050000000003002000004000000000000000000000000000000000000000
...........................................................................................TTCAATGGGATGTGTGAAT........................................................19116.00160000020001000000000020000000512201000000000000000000000000000000000000000000000
........................................................................................CTGTTCAATGGGATGTGTGAAT........................................................22115.00150000000003000000000000000000520101000002000000000000000000000100000000000000000
.....................................................GTACGTTACACTGAACAGAT.............................................................................................20115.00150000000001000000000020000000231401000001000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGATTA...........................................................................................23115.00150000000100000000000000000000820400000000000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTC...........................................................20115.00150000040000000000000020000000122200000000000000000000000000000200000000000000000
......................................................TACGTTACACTGAACAGA..............................................................................................18114.00141000000000000000000000000000320107000000000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAG...............................................................................................19114.00140000000000000000000010000000351300000001000000000000000000000000000000000000000
........................................................................................CTGTTCAATGGGATGTGTG...........................................................19114.00140000000102000000000060000000100101000002000000000000000000000000000000000000000
.................................................ATTCGTACGTTACACTGAA..................................................................................................19113.00130000000000000000000010000000411401000001000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGAAAA.......................................................24113.00130000010000000000000010000000320202000001000000000000000000000100000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTA...........................................................20113.00130000000100000000000020000000200100000007000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGATA............................................................................................22112.00121000010000000000000010000000211500000000000000000000000000000000000000000000000
...........................................................................................TTCAATGGGATGTGTGAATT.......................................................20112.00120000000000000000000000000000420102000003000000000000000000000000000000000000000
.................................................ATTCGTACGTTACACTGAACAA...............................................................................................22110.00100000000000000000000000000000121600000000000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACC................................................................................................20110.00103000000000000000000010000000212000000001000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAT...............................................................................................21110.00100000010000000000000030000000001103000001000000000000000000000000000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATTAA.....................................................2419.0090000000000000000000000000000410400000000000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTTT..........................................................2119.0090000000102000000000000000000131000000000000000000000000000000100000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAAC........................................................2119.0090000010001000000000030000000011000000002000000000000000000000000000000000000000
..........................................................................................GTTCAATGGGATGTGTGAATT.......................................................2119.0091000000200000000000000000000110202000000000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGATA............................................................................................2419.0090000000000000000000010000000201200000003000000000000000000000000000000000000000
..........................................................................................GTTCAATGGGATGTGTGAATTA......................................................2218.0080000000000000000000010000000221101000000000000000000000000000000000000000000000
.........................................................................................TGTTCAATGGGATGTGTGT..........................................................1918.0080000000002000000000000000000010101000003000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACACC..............................................................................................2218.0080000000000000000000080000000000000000000000000000000000000000000000000000000000
.....................................................GTACGTTACACTGAACAGATT............................................................................................2117.0070000000000000000000000000000410002000000000000000000000000000000000000000000000
...................................................TCGTACGTTACACTGAACA................................................................................................1917.0070010000000000000000000000000301000000001000000000000000000000000000000000000001
..........................................................................................GTTCAATGGGATGTGTGAA.........................................................1917.0070000010101000000000030000000000000000001000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTCC..........................................................2117.0070000040000000000000000000000010100000001000000000000000000000000000000000000000
...........................................................................................TTCAATGGGATGTGTGAATTA......................................................2117.0070000000001000000000000000000401000000000000000000000000000000100000000000000000
.........................................................................................TGTTCAATGGGATGTGTGAATTCC.....................................................2417.0070000000000000000000000000000201200000002000000000000000000000000000000000000000
.................................................ATTCGTACGTTACACTGAACAGG..............................................................................................2316.0065000000000000000000000000000000001000000000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAGATTTC..........................................................................................2616.0060000000000000000000000000000510000000000000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGAA.............................................................................................2116.0061000000000000000000000000000120100000001000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGTT.........................................................2216.0060000010000000000000020000000102000000000000000000000000000000000000000000000000
....................................................CGTACGTTACACTGAACAGATTC...........................................................................................2316.0062000010000000000000010000000100100000000000000000000000000000000000000000000000
........................................................................................CTGTTCAATGGGATGTGTGAAA........................................................2216.0060000010001000000000010000000110100000000000000000000000000000000000000000000000
..................................................TTCGTACGTTACACTGAACAAT..............................................................................................2215.0050000000000000000000040000000010000000000000000000000000000000000000000000000000
.......................................................................................TCTGTTCAATGGGATGTGTGCC.........................................................2215.0050000010000000000000040000000000000000000000000000000000000000000000000000000000

Generated: 10/20/2015 at 07:39 PM