ID:

dmo_1295

 Coordinate:

scaffold_6498:369045-369195 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -6.7 -6.5

Flybase annnotation

exon [dmoj_GLEANR_14115:1]; CDS [Dmoj\GI14067-cds]; intron [Dmoj\GI14067-in]

No Repeatable elements found

mature
  1. scaffold_4640:7998-8021 -
  2. scaffold_6328:2796131-2796154 +
  3. scaffold_6473:13078274-13078297 +
  4. scaffold_6482:1791302-1791325 -
  5. dmo_1295  scaffold_6498:369156-369179 -
  6. scaffold_6498:411287-411310 +
  7. scaffold_6500:5811337-5811360 -
  8. scaffold_6500:6701899-6701922 -
  9. scaffold_6500:11969922-11969945 -
  10. scaffold_6500:30876025-30876048 -
  11. scaffold_6540:25968015-25968038 -
  12. scaffold_6541:2267855-2267878 +
star
  1. scaffold_3911:4943-4967 -
  2. scaffold_3957:2851-2875 -
  3. scaffold_4852:2975-2999 +
  4. scaffold_6328:2796196-2796220 +
  5. scaffold_6350:4128-4152 +
  6. scaffold_6473:13078339-13078363 +
  7. scaffold_6482:1791236-1791260 -
  8. dmo_1295  scaffold_6498:369090-369114 -
  9. scaffold_6498:411352-411376 +
  10. scaffold_6498:2769506-2769530 -
  11. scaffold_6500:5811271-5811295 -
  12. scaffold_6500:6701833-6701857 -
  13. scaffold_6500:11969856-11969880 -
  14. scaffold_6500:18730299-18730323 -
  15. scaffold_6500:30491449-30491473 -
  16. scaffold_6500:30875959-30875983 -
  17. scaffold_6540:4510866-4510890 -
  18. scaffold_6540:25967949-25967973 -
  19. scaffold_6541:1515217-1515241 +
  20. scaffold_6541:2267918-2267942 +

Sense Strand Reads

-----------------------------------###############---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGAATGAACAGTGAGGCCTCTTGAATGCAGCAAAAATGGCCAATAAGTCAGTAGGAATGGTTGATGGACATAGTTAACTGGGTTTTCGCCATCAGTATTGCTTATTTATGCCAATTTACCTACACATTTAAATATAGTACACGTTGAAGCTGCATCAATAAAGGTGCTGCTCACCCCTGCTGTCATGTCAGAAACATCCGGTAGAATGAACTAATATTTGTGTATTAATTGCCAAGTCGTAAACTTGTATG
******************************************************************..............((((((.((.....((((((..((((((....................))))))))))))..)).)))))).....*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V049
head
 V110
male body
..................................................................GACATAGTTAACTGGGTTTTCGCC................................................................................................................................................................. 24 0 12 2.58 31 21 10 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCATC.............................................................................................................................................................. 27 0 12 1.33 16 13 3 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGCATC............................................................................................... 25 0 20 1.25 25 14 7 0 4
...................................................................................................................................ATATAGTACACGTTGAAGCTGCA................................................................................................. 23 0 20 1.15 23 18 2 0 3
..................................................................GACATAGTTAACTGGGTTTTCGC.................................................................................................................................................................. 23 0 12 0.67 8 8 0 0 0
..........................................ATAAGTCAGTAGGAATGGTTGATGGA....................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGC.................................................................................................. 22 0 20 0.50 10 6 4 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCA................................................................................................................................................................ 25 0 12 0.50 6 6 0 0 0
........................................CAATAAGTCAGTAGGAATGGTT............................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0
..........GTGAGGCCTCTTGCATGCAGCAA.......................................................................................................................................................................................................................... 23 1 2 0.50 1 0 0 1 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGA.............................................. 23 0 20 0.45 9 9 0 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGCAT................................................................................................ 24 0 20 0.40 8 7 1 0 0
...................................................................ACATAGTTAACTGGGTTTTCGCC................................................................................................................................................................. 23 0 12 0.25 3 2 1 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGCATCA.............................................................................................. 26 0 20 0.25 5 4 0 0 1
...........................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTA........................ 24 0 18 0.22 4 3 1 0 0
...........................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTAAT...................... 26 0 15 0.20 3 3 0 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCAT............................................................................................................................................................... 26 0 12 0.17 2 1 1 0 0
...................................................................................................................................AGATAGTACACGTTGAAGCTGC.................................................................................................. 22 1 20 0.15 3 0 3 0 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGTA................................................ 21 0 20 0.15 3 3 0 0 0
...........................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTAATT..................... 27 0 15 0.13 2 1 1 0 0
........................................................................................................TTTATGCCAATTTACCTACACATTTAA........................................................................................................................ 27 0 17 0.12 2 2 0 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCT.................................................................................................... 20 0 20 0.10 2 0 2 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTG................................................................................................... 21 0 20 0.10 2 1 0 0 1
........................................................................................................TTTATGCCAATTTACCTACACATT........................................................................................................................... 24 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................................CTGTCATGTCAGAAACATCCGG.................................................. 22 0 20 0.10 2 2 0 0 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAATGA.......................................... 27 0 20 0.10 2 1 1 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGCATCAA............................................................................................. 27 0 20 0.10 2 2 0 0 0
.................................................................CTACATAGTTAACTGGGTTTTCGCC................................................................................................................................................................. 25 2 12 0.08 1 0 1 0 0
..................................................................GACTTAGTTAACTGGGTTTTCGCC................................................................................................................................................................. 24 1 12 0.08 1 0 1 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCATA.............................................................................................................................................................. 27 1 12 0.08 1 1 0 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCATCAG............................................................................................................................................................ 29 0 12 0.08 1 1 0 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCATCAT............................................................................................................................................................ 29 1 12 0.08 1 1 0 0 0
..................................................................GACATAGTTAACTGGGTTTTCGCCATCA............................................................................................................................................................. 28 0 12 0.08 1 1 0 0 0
..................................................................GACATAGTTAACTGGGTTTTCG................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0
..................................................................GACATAGTTAAGTGGGTTTTCGCC................................................................................................................................................................. 24 1 12 0.08 1 1 0 0 0
..................................................................GGCATAGTTAACTGGGTTTTCGCC................................................................................................................................................................. 24 1 12 0.08 1 0 1 0 0
..............................................................GATGGACATAGTTAACTGGGTTTTCGC.................................................................................................................................................................. 27 0 12 0.08 1 1 0 0 0
..................................................................GACTTAGTTAACTGGGTTTTCGC.................................................................................................................................................................. 23 1 12 0.08 1 0 1 0 0
.......................................................................................................................................................................TGCTCACCCCTGCTGTCATGTCAGA........................................................... 25 0 15 0.07 1 1 0 0 0
...................................................................................................................................................................GTGCTGCTCACCCCTGCTGTCATG................................................................ 24 0 15 0.07 1 1 0 0 0
.......................................................................................................................................................................TGCTCACCCCTGCTGTCATGTCAGAAAC........................................................ 28 0 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................AATGAACTAATATTTGTGTATTAAT...................... 25 0 15 0.07 1 1 0 0 0
....................................................................................................................................................................TGCTGCTCACCCCTGCTGTCATGTCA............................................................. 26 0 15 0.07 1 1 0 0 0
.........................................................................................................................................................................................................................TTGTGTATTAATTGCCAAGTCGTAAAC....... 27 0 15 0.07 1 1 0 0 0
................................................................................................................................TAAATATAGTACACGTTGAAGC..................................................................................................... 22 0 17 0.06 1 1 0 0 0
........................................................................................................TTTATGCCAATTTACCTACACATTTAAA....................................................................................................................... 28 0 17 0.06 1 1 0 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGCATCAATA........................................................................................... 29 0 18 0.06 1 1 0 0 0
........................................................................................................................................GTACACGTTGAAGCTGCATCAAT............................................................................................ 23 0 18 0.06 1 1 0 0 0
........................................................................................................................................................................................................GTAGAATGAACTAATATTTGTGTAT.......................... 25 0 18 0.06 1 0 1 0 0
...........................................................................................................................................................................................................GAATGAACTAATATTTGTGTATT......................... 23 0 18 0.06 1 0 1 0 0
............................................................................................................................................................................................................AATGAACTAATATTTGTGTATTA........................ 23 0 18 0.06 1 1 0 0 0
...................................................................................................................................TTATAGTACACGTTGAAGCTGCATC............................................................................................... 25 1 20 0.05 1 0 1 0 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAA............................................. 24 0 20 0.05 1 0 1 0 0
...................................................................................................................................ATATAGTACACATTGAAGCTGCATC............................................................................................... 25 1 20 0.05 1 1 0 0 0
....................................................................................................................................TATAGTACACGTTGAAGCTGCAT................................................................................................ 23 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................................ATGTCAGAAACATCCGGTAGA.............................................. 21 0 20 0.05 1 1 0 0 0
....................................................................................................................................TATAGTACACGTTGAAGCTGCATCAA............................................................................................. 26 0 20 0.05 1 1 0 0 0
........................................................................................................TTTATGCCAATTTACCTACACA............................................................................................................................. 22 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGC................................................. 20 1 20 0.05 1 1 0 0 0
...................................................................................................................................AGATAGTACACGTTGAAGCTGCATC............................................................................................... 25 1 20 0.05 1 0 1 0 0
......................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAAT............................................ 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................ATGTAGTACACGTTGAAGCTGC.................................................................................................. 22 1 20 0.05 1 0 1 0 0
.......................................................................................................................................................................................CATGTCAGAAACATCCGGTAGA.............................................. 22 0 20 0.05 1 1 0 0 0
...................................................................................................................................ATATAGTACACGTTGAAGCTGAATC............................................................................................... 25 1 20 0.05 1 0 1 0 0
................................................................................................................................................................................................AACATCCGGGGAAATGAAC........................................ 19 3 20 0.05 1 0 0 0 1
.......................................................................................................................................AGTACACGTTGAAGCTGCATC............................................................................................... 21 0 20 0.05 1 0 1 0 0
....................................................................................................................................TATAGTACACGTTGAAGCTGCA................................................................................................. 22 0 20 0.05 1 1 0 0 0
...................................................................................................................................ATATATTACACGTTGAAGCTGCATC............................................................................................... 25 1 20 0.05 1 0 1 0 0
........................................................................................................................................................................................ATGTCAGAAACATCCGGTA................................................ 19 0 20 0.05 1 1 0 0 0
...................................................................................................................................AGATAGTACACGTTGAAGCTG................................................................................................... 21 1 20 0.05 1 0 1 0 0
....................................................................................................................................TATAGTACACGTTGAAGCTGCATCA.............................................................................................. 25 0 20 0.05 1 1 0 0 0
....................................................................................................................................TATAGTACACGTTGAAGCTGCATC............................................................................................... 24 0 20 0.05 1 0 1 0 0
........................................................................................................TTTATGCCAATTTACCTACACAT............................................................................................................................ 23 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................CCTGCTGTCATGTCAGAAACATCC.................................................... 24 0 20 0.05 1 1 0 0 0
........................................................................................................ATTATGCCAATTTACCTACACAT............................................................................................................................ 23 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

CCTTACTTGTCACTCCGGAGAACTTACGTCGTTTTTACCGGTTATTCAGTCATCCTTACCAACTACCTGTATCAATTGACCCAAAAGCGGTAGTCATAACGAATAAATACGGTTAAATGGATGTGTAAATTTATATCATGTGCAACTTCGACGTAGTTATTTCCACGACGAGTGGGGACGACAGTACAGTCTTTGTAGGCCATCTTACTTGATTATAAACACATAATTAACGGTTCAGCATTTGAACATAC
***********************************************************************************************..............((((((.((.....((((((..((((((....................))))))))))))..)).)))))).....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
 V056
head
...................................................ATCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 25 0 2 21.00 42 33 9 0 0 0 0
..................................................CATCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 26 0 2 14.50 29 27 2 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGTCT........................................................... 24 0 15 9.87 148 58 62 21 6 0 1
........................................................................................GGTAGTCATAACGAATAAATACGGTT......................................................................................................................................... 26 0 1 9.00 9 9 0 0 0 0 0
.........................................................................................GTAGTCATAACGAATAAATACGGTT......................................................................................................................................... 25 0 1 9.00 9 9 0 0 0 0 0
.......................................................................................CGGTAGTCATAACGAATAAATACGGTT......................................................................................................................................... 27 0 1 7.00 7 4 3 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTTGAT...................................... 28 0 20 5.50 110 107 3 0 0 0 0
................................................GTCATCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 28 0 2 3.50 7 7 0 0 0 0 0
......................................................................................GCGGTAGTCATAACGAATAAATACGGTT......................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGACAGTACAGTCT........................................................... 23 0 15 2.67 40 27 4 6 3 0 0
....................................................TCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 24 0 12 2.25 27 18 9 0 0 0 0
.......................................................................................................................................................................ACGAGTGGGGACGACAGTACAGTCT........................................................... 25 0 15 1.53 23 23 0 0 0 0 0
.................................................TCATCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 27 0 2 1.50 3 2 1 0 0 0 0
..................................................CATCCTTACCAACTACCTGTATCAATT.............................................................................................................................................................................. 27 0 2 1.50 3 2 1 0 0 0 0
.....................................................CCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 23 0 13 1.15 15 1 14 0 0 0 0
........................................................................................GGTAGTCATAACGAATAAATACGGT.......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................CGGTAGTCATAACGAATAAATACG............................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................GTAGTCATAACGAATAAATACGCTT......................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
................................................................................CCAAAAGCGGTAGTCATAACGAAT................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
......................................................................................GCGGTAGTCATAACGAATAAATACGG........................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGCGGTAGTCATAACGAATAAATACGGTT......................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
..............................................CAGTCATCCTTACCAACTACCTGTATC.................................................................................................................................................................................. 27 0 2 1.00 2 0 2 0 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACAGT.................................................................. 23 0 15 1.00 15 3 11 1 0 0 0
...................................................ATCCTTACCAACTACCTGTATCAA................................................................................................................................................................................ 24 0 2 1.00 2 2 0 0 0 0 0
......................................................................................GCGGTAGTCATAACGAATAAATACGGT.......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
................GGAGAACTTACGTCGTTTTTACCGGTT................................................................................................................................................................................................................ 27 0 2 1.00 2 1 0 1 0 0 0
..................................................CATCCTTACCAACTACCTGTATCAA................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0 0 0 0
........................................................................................GGTAGTCATAACGAATAAATACG............................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................ATGGATGTGTAAATTTATATCATGT.............................................................................................................. 25 0 17 0.94 16 2 0 0 13 1 0
..........................................................................................................................................................................AGTGGGGACGACAGTACAGTCT........................................................... 22 0 15 0.93 14 13 1 0 0 0 0
................................................................................................................................................................................................TTGTAGGCCATCTTACTTGAT...................................... 21 0 20 0.90 18 12 1 4 1 0 0
.................................................................................................................................................................TCCACGACGAGTGGGGACGACAGT.................................................................. 24 0 15 0.73 11 5 6 0 0 0 0
................................................................................................................................................................TTCCACGACGAGTGGGGACGACAGT.................................................................. 25 0 15 0.67 10 8 2 0 0 0 0
............................................................................................................................................................................................GTCTTTGTAGGCCATCTTACTTGAT...................................... 25 0 20 0.65 13 10 1 1 1 0 0
.......................................................................................................................................................................................GTACAGTCTTTGTAGGCCATCTTACT.......................................... 26 0 20 0.60 12 10 2 0 0 0 0
..........................................................................................................................................................................................CAGTCTTTGTAGGCCATCTTACTTGAT...................................... 27 0 20 0.55 11 10 1 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTT......................................... 25 0 20 0.55 11 11 0 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGACAGTACAGTCT........................................................... 26 0 15 0.53 8 8 0 0 0 0 0
.......TGTCACTCCGGAGAACTTACGTCGTT.......................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
.............................................TCAGTCATCCTTACCAACTACCTGTAT................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
..............................GTTTTTACCGGTTATTCAGTCATCCT................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
........................................GTTATACAGTCATCCTTACCAACTAC......................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
..............CCGGAGAACTTACGTCGTTTTTACCGGTT................................................................................................................................................................................................................ 29 0 2 0.50 1 0 1 0 0 0 0
................................................GTCATCCTTACCAACTACCTGTATC.................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0
..................................................CATCCTTACCAACTACCTGTATTAAT............................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
...................................................ATCCTTACCAACTACCTGTATCAATT.............................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0
.................................................TCATCCTTACCAACTACCTGTAT................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.......TGTCACTCCGGAGAACTTACGTCGTTT......................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
...........................................ATTCAGTCATCCTTACCAACTACCTG...................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................CGACAGTACAGTCTTTGTAGGCCATCTT............................................. 28 0 20 0.50 10 9 1 0 0 0 0
..................AGAACTTACGTCGTTTTTACCGGTTAT.............................................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................CGACAGTACAGTCTTTGTAGGCCATCT.............................................. 27 0 20 0.50 10 8 2 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTTGA....................................... 27 0 20 0.50 10 10 0 0 0 0 0
..................................................CATCCTTACCAACTACCTGTATCAATC.............................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0 0
.................................................TCATCCTTACCAACTACCTGTATTAAT............................................................................................................................................................................... 27 1 2 0.50 1 0 1 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGTC............................................................ 23 0 15 0.47 7 4 3 0 0 0 0
.............................................................................................................................................................................GGGGACGACAGTACAGTCT........................................................... 19 0 15 0.47 7 5 2 0 0 0 0
.............................................................................................................................................................................................TCTTTGTAGGCCATCTTACTTGAT...................................... 24 0 20 0.45 9 8 1 0 0 0 0
...........................................................................................................................................................................................AGTCTTTGTAGGCCATCTTACTTGAT...................................... 26 0 20 0.45 9 9 0 0 0 0 0
.....................................................................................................................................................................................CAGTACAGTCTTTGTAGGCCATCTTACT.......................................... 28 0 20 0.40 8 7 1 0 0 0 0
......................................................CTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 22 0 13 0.31 4 2 2 0 0 0 0
..............................................................................................................................................................................................CTTTGTAGGCCATCTTACTTGAT...................................... 23 0 20 0.30 6 2 4 0 0 0 0
....................................................................................................................................................................................................AGGCCATCTTACTTGATTATAAACACAT........................... 28 0 18 0.28 5 3 1 0 1 0 0
.....................................................................................................................................................................CGACGAGTGGGGACGACAGTACAGTCT........................................................... 27 0 15 0.27 4 4 0 0 0 0 0
.....................................................................................................................................................................CGACGAGTGGGGACGACAGTACAG.............................................................. 24 0 15 0.27 4 1 1 0 1 1 0
........................................................................................................................................................................................TACAGTCTTTGTAGGCCATCTTACT.......................................... 25 0 20 0.25 5 5 0 0 0 0 0
........................................................................................................................................................................................TACAGTCTTTGTAGGCCATCTTACTTGAT...................................... 29 0 20 0.25 5 5 0 0 0 0 0
..................................................................................................................................................................................CGACAGTACAGTCTTTGTAGGCCAT................................................ 25 0 20 0.25 5 5 0 0 0 0 0
.....................................................................................................................TGGATGTGTAAATTTATATCATGT.............................................................................................................. 24 0 17 0.24 4 3 0 0 1 0 0
.....................................................CTTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 23 1 13 0.23 3 0 3 0 0 0 0
..............................................................................................................................................................ATTTCCACGACGAGTGGGGACGACAGT.................................................................. 27 0 13 0.23 3 3 0 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACT.......................................... 24 0 20 0.20 4 4 0 0 0 0 0
.......................................................................................................................................................................ACGAGTGGGGACGACAGTACAG.............................................................. 22 0 15 0.20 3 3 0 0 0 0 0
..............................................................................................................................................................................GGGACGACAGTACAGTCT........................................................... 18 0 15 0.20 3 2 1 0 0 0 0
.................................................................................................................................................................TCCACGACGAGTGGGGACGACATT.................................................................. 24 1 15 0.20 3 0 3 0 0 0 0
......................................................................................................................................................................AACGAGTGGGGACGACAGTACAGTCT........................................................... 26 1 15 0.20 3 2 1 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGACAGTACAGTC............................................................ 22 0 15 0.20 3 3 0 0 0 0 0
...............................................................................................................................................................TTTCCACGACGAGTGGGGACGACAGT.................................................................. 26 0 15 0.20 3 2 0 1 0 0 0
...............................................................................................................................................................................................TTTGTAGGCCATCTTACTTGAT...................................... 22 0 20 0.20 4 4 0 0 0 0 0
...................................................TTCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 25 1 12 0.17 2 0 2 0 0 0 0
.......................................................................................................................................................................................................CCATCTTACTTGATTATAAACACATAA......................... 27 0 18 0.17 3 0 3 0 0 0 0
....................................................TCCTTACCAACTACCTGTATCAATT.............................................................................................................................................................................. 25 0 12 0.17 2 2 0 0 0 0 0
...................................................CTCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 25 1 12 0.17 2 2 0 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTAC........................................... 23 0 20 0.15 3 3 0 0 0 0 0
........................................................................................................................................................................................TACAGTCTTTGTAGGCCATCTTACTT......................................... 26 0 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................................................................................GTACAGTCTTTGTAGGCCATCTTACTT......................................... 27 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................................................................................................CCAGTCTTTGTAGGCCATCTTACTTGAT...................................... 28 1 20 0.15 3 3 0 0 0 0 0
........................................................................................................................................................................................CACAGTCTTTGTAGGCCATCTTACTTGAT...................................... 29 1 20 0.15 3 2 1 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGT............................................................. 22 0 15 0.13 2 0 1 1 0 0 0
...........................................................................................................................................................................GTGGGGACGACAGTACAGTCT........................................................... 21 0 15 0.13 2 2 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGTCTTT......................................................... 26 0 15 0.13 2 0 1 1 0 0 0
....................................................................................................................................................................ACGACGAGTGGGGACGACAGTACAGTCT........................................................... 28 0 15 0.13 2 2 0 0 0 0 0
...................................................................................................................................................................CACGACGAGTGGGGACGACAGT.................................................................. 22 0 15 0.13 2 1 0 0 0 1 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAG.............................................................. 21 0 15 0.13 2 1 1 0 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACATT.................................................................. 23 1 15 0.13 2 0 2 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGACAGTACAGTC............................................................ 25 0 15 0.13 2 2 0 0 0 0 0
...........................................................................................................................................................................................................................CACATAATTAACGGTTCAGCATTT........ 24 0 16 0.13 2 0 2 0 0 0 0
........................................................................................................................................................................TGAGTGGGGACGACAGTACAGTCT........................................................... 24 1 17 0.12 2 1 0 1 0 0 0
.............................................................................................................................................GCAACTTCGACGTAGTTATTT......................................................................................... 21 0 18 0.11 2 0 0 1 1 0 0
......................................................................................................................................................................................AGTACAGTCTTTGTAGGCCATCTT............................................. 24 0 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................................................................TAGGCCATCTTACTTGAT...................................... 18 0 20 0.10 2 0 1 1 0 0 0
.............................................................................................................................................................................................TCTTTGTAGGCCATCTTACTTGGT...................................... 24 1 20 0.10 2 0 2 0 0 0 0
......................................................................................................................................................................................AGTACAGTCTTTGTAGGCCATCTTACT.......................................... 27 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................................................................ACAGTACAGTCTTTGTAGGCCATCTT............................................. 26 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................................................CAGTACAGTCTTTGTAGGCCATCTT............................................. 25 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................................................CAGTACAGTCTTTGTAGGCCATCTTA............................................ 26 0 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................................................GACAGTACAGTCTTTGTAGGCCATCTT............................................. 27 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................ATATCATGTGCAACTTCGACGTAGT.............................................................................................. 25 0 20 0.10 2 1 0 0 1 0 0
...................................................................................................................................TATATCATGTGCAACTTCGACGTAGTT............................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTTG........................................ 26 0 20 0.10 2 2 0 0 0 0 0
......................CTTACGTCGTTTTTACCGGTTATTCAGT......................................................................................................................................................................................................... 28 0 11 0.09 1 1 0 0 0 0 0
........................TACGTCGTTTTTACCGGTTATTCAGT......................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0
....................................................TCCTTACCAACTACCTGTA.................................................................................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0 0
..................................................CTTCCTTACCAACTACCTGTATCAAT............................................................................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0 0
....................................................TCCTTACCAACTACCTGTATCAATC.............................................................................................................................................................................. 25 1 12 0.08 1 0 1 0 0 0 0
....................................................TCCTTACCAACTACCTGTATTAAT............................................................................................................................................................................... 24 1 12 0.08 1 0 1 0 0 0 0
...........................GTCGTTTTTACCGGTTATTCAGT......................................................................................................................................................................................................... 23 0 12 0.08 1 1 0 0 0 0 0
.....................................................CCTTACCAACTACCTGTATCAATTGAC........................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
..............................................................................................................................................................ATTTCCACGACGAGTGGGGACGACAG................................................................... 26 0 13 0.08 1 1 0 0 0 0 0
.............................................................................................................................................................TATTTCCACGACGAGTGGGGACGACAGT.................................................................. 28 0 13 0.08 1 1 0 0 0 0 0
....................................................TCCTTCCCAACTACCTGTATCAAT............................................................................................................................................................................... 24 1 13 0.08 1 0 0 1 0 0 0
......................................................CTTACCAACTACCTGTATCAA................................................................................................................................................................................ 21 0 13 0.08 1 1 0 0 0 0 0
.......................................................TTACCAACTACCTGTATCAATTGACCCA........................................................................................................................................................................ 28 0 13 0.08 1 1 0 0 0 0 0
.....................................................CCTTACCAACTACCTGTATCA................................................................................................................................................................................. 21 0 13 0.08 1 1 0 0 0 0 0
......................................................CTTACCAACTACCTGTATCAATTGACC.......................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
...........................................................................................................................................................GTTATTTCCACGACGAGTGGGGA......................................................................... 23 0 13 0.08 1 1 0 0 0 0 0
.....................................................CCTTACCAACTACCTGTATTAAT............................................................................................................................................................................... 23 1 13 0.08 1 0 1 0 0 0 0
......................................................ATTACCAACTACCTGTATCAAT............................................................................................................................................................................... 22 1 13 0.08 1 0 1 0 0 0 0
.........................................................ACCAACTACCTGTATCAAT............................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0
........................................................TACCAACTAACTGTATCAAT............................................................................................................................................................................... 20 1 14 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................................................................CGATTATAAACACATAATTAACGGCT................ 26 2 14 0.07 1 0 1 0 0 0 0
......................................................CTTACCAACTACCTGTATCAATTA............................................................................................................................................................................. 24 1 14 0.07 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CTATAAACACATAATTAACGGTT................ 23 1 14 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................................................................ATAAACACATAATTAACGGTTCAGCATTT........ 29 0 14 0.07 1 1 0 0 0 0 0
........................................................TACCAACTACCTGTATCAATTGAC........................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0
........................................................CACCAACTACCTGTATCAATTGATCCA........................................................................................................................................................................ 27 2 14 0.07 1 0 1 0 0 0 0
........................................................TACCAACTACCTGTATCAATTGACC.......................................................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................CATAAACACATAATTAACGGTTCAGCAT.......... 28 1 14 0.07 1 0 1 0 0 0 0
........................................................CACCAACTACCTGTATCA................................................................................................................................................................................. 18 1 14 0.07 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................TATAAACACATAATTAACGGTTCAGCATT......... 29 0 14 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TGATTATAAACACATAATTAACGGTT................ 26 0 14 0.07 1 1 0 0 0 0 0
........................................................TACCAACTACCTGTATCAATTGACCCA........................................................................................................................................................................ 27 0 14 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGCGGGGACGACAGTACAGTCTTT......................................................... 25 1 15 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................................AAGAGTGGGGACGACAGTACAGTC............................................................ 24 1 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACA.................................................................... 21 0 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGCCAGTACAGTCT........................................................... 23 1 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACATTCT........................................................... 24 1 15 0.07 1 0 0 1 0 0 0
...................................................................................................................................................................CACGACGAGTGGGGACGACAGTACAG.............................................................. 26 0 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................TGGGGACGACAGTACAGTCTTTGT....................................................... 24 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACGGTACAGTCT........................................................... 24 1 15 0.07 1 0 0 1 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACAG................................................................... 22 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................GGAGTGGGGCCGACAGTACAGTCT........................................................... 24 2 15 0.07 1 0 0 1 0 0 0
........................................................................................................................................................................CGAGTGGGGACGAAAGTACAGTCT........................................................... 24 1 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGTCTTTG........................................................ 27 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................TCCACGACGAGTGGGGACGACAGTA................................................................. 25 0 15 0.07 1 0 1 0 0 0 0
....................................................................................................................................................................CCGACGAGTGGGGACGACAGTACAG.............................................................. 25 1 15 0.07 1 0 1 0 0 0 0
.........................................................................................................................................................................TAGTGGGGACGACAGTACAGTCT........................................................... 23 1 15 0.07 1 1 0 0 0 0 0
................................................................................................................................................................CTCCACGACGAGTGGGGACGACAGT.................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGACAGTACAGT............................................................. 21 0 15 0.07 1 0 0 0 1 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGTCTC.......................................................... 25 1 15 0.07 1 0 1 0 0 0 0
..........................................................CCAACTACCTGTATCAATTGACCCAA....................................................................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
............................................................................................................................................................................TGGGGACGACAGTACAGTCT........................................................... 20 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................CCCACGACGAGTGGGGACGACATT.................................................................. 24 2 15 0.07 1 0 1 0 0 0 0
..........................................................................................................................................................................AGTGGGGACGACAGTACAGT............................................................. 20 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGACAGTACAGT............................................................. 24 0 15 0.07 1 1 0 0 0 0 0
..........................................................CCAACTACCTGTATCAATTGATCCA........................................................................................................................................................................ 25 1 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGGCAGTACAGTCT........................................................... 24 1 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGACAGTACAGCCT........................................................... 24 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................................................................................ACGACGAGTGGGGACGACAGT.................................................................. 21 0 15 0.07 1 0 0 0 0 0 1
...............................................................................................................................................................TTTCCACGACGAGTGGGGACGACAG................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................................................................CGACGAGTGGGGACGACAGT.................................................................. 20 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGACAGTACGG.............................................................. 23 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGACAGTACAG.............................................................. 23 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACAACAGTACAGTCT........................................................... 24 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................GGCGACGACAGTACAGTCT........................................................... 19 1 15 0.07 1 0 0 1 0 0 0
.....................................................................................................................................................................CGACGAGTGGGGACGACAGTACGG.............................................................. 24 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................................GACGAGTGGGGACGGCAGTACAGTCT........................................................... 26 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGACAGTACAGTCTC.......................................................... 24 1 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACAGTACGG.............................................................. 27 1 15 0.07 1 0 1 0 0 0 0
............................................................................................................................................................................................................................ACATAATTAACGGTTCAGCATTTGAA..... 26 0 15 0.07 1 1 0 0 0 0 0
....................................................................................................................................................................ACGACGAGTGGGGACGACAGTACAG.............................................................. 25 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................................................................CGACGAGTGGGGACGACAGTA................................................................. 21 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................CCCACGACGAGTGGGGACGACAGT.................................................................. 24 1 15 0.07 1 0 1 0 0 0 0
................................................................................................................................................................TTCCACGACGAGTGGGGACGACATT.................................................................. 25 1 15 0.07 1 0 1 0 0 0 0
..................................................................................................................................................................CCACGACGAGTGGGGACGACAGTA................................................................. 24 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................TCCACGACGAGTGGGGACGACAGTACAG.............................................................. 28 0 15 0.07 1 0 1 0 0 0 0
....................................................................................................................................................................ACGACGAGTGGGGACGACAGTACAGTC............................................................ 27 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTTGGGACGACAGTACATTCT........................................................... 24 2 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGCCAGTACAGTCT........................................................... 24 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGTGGGGACGACATTACAGTCT........................................................... 23 1 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGAGGGGACGACAGTACAGTCT........................................................... 24 1 15 0.07 1 0 1 0 0 0 0
.....................................................................................................................................................................TGACGAGTGGGGACGACAGTACAG.............................................................. 24 1 15 0.07 1 0 0 0 1 0 0
...................................................................................................................................................................CACGACGAGTGGGGACGACAG................................................................... 21 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................AGCAGGGACGACAGTACCGTCT........................................................... 22 3 16 0.06 1 0 0 1 0 0 0
............................................................................................................................................................................................................................ACATAATTAACGGTTCAGCATTT........ 23 0 16 0.06 1 1 0 0 0 0 0
............................................................................................................ACGGTTAAATGGATGTGTAAATTTA...................................................................................................................... 25 0 16 0.06 1 1 0 0 0 0 0
.........................................................................................................................TGTGTAAATTTATATCATGTGCAAC......................................................................................................... 25 0 16 0.06 1 1 0 0 0 0 0
..............................................................................................................................AAATTTATATCATGTGCAACTTCGACGT................................................................................................. 28 0 16 0.06 1 1 0 0 0 0 0
................................................................................................................TTAAATGGATGTGTAAATTTATATCATGT.............................................................................................................. 29 0 16 0.06 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGGGGACGATAGTACAGTCT........................................................... 24 1 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TAAACACATAATTAACGGTTCAGCATTT........ 28 0 16 0.06 1 1 0 0 0 0 0
.........................................................................................................................TGTGTAAATTTATATCATGTGCAACT........................................................................................................ 26 0 16 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................ACACATAATTAACGGTTCAGCATTT........ 25 0 16 0.06 1 0 0 0 1 0 0
........................................................................................................................ATGTGTAAATTTATATCATGT.............................................................................................................. 21 0 17 0.06 1 0 0 1 0 0 0
..................................................................................................................AAATGGATGTGTAAATTTAT..................................................................................................................... 20 0 17 0.06 1 1 0 0 0 0 0
...........................................................................................................TACGGTTAAATGGATGTGTAAATTT....................................................................................................................... 25 0 17 0.06 1 0 1 0 0 0 0
..............................................................................................................................................CAACTTCGACGTAGTTATTT......................................................................................... 20 0 18 0.06 1 0 1 0 0 0 0
................................................................................................................................................................................................................TTGATTATAAACACATAA......................... 18 0 18 0.06 1 0 1 0 0 0 0
........................................................................................................................................CATGTGCAACTTCGACGTAGTTATTT......................................................................................... 26 0 18 0.06 1 0 0 0 1 0 0
....................................................................................................................................................CGACGTAGTTATTTCCACGACGAGT.............................................................................. 25 0 18 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................GGTTCAGCATTTGAACATAC 20 0 18 0.06 1 1 0 0 0 0 0
.......................................................................................................................................ACATGTGCAACTTCGACGTAGTTATTT......................................................................................... 27 1 18 0.06 1 1 0 0 0 0 0
................................................................................................................................................................................................TTGTAGGCCATCTTACTTGATTATAA................................. 26 0 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................TCGACGTAGTTATTTCCACGACGAGT.............................................................................. 26 0 18 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................................GGCCATCTTACTTGATTATAAACACAT........................... 27 0 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TAGGCCATCTTACTTGATTATAAACA.............................. 26 0 18 0.06 1 0 1 0 0 0 0
................................................................................................................................................................................................TTGTAGGCCATCTTACTTGATTAT................................... 24 0 18 0.06 1 1 0 0 0 0 0
............................................................................................................................................CGCAACTTCGACGTAGTTAT........................................................................................... 20 1 19 0.05 1 0 0 1 0 0 0
..................................................................................................................................CTATATCATGTGCAACTTCGACGTAGTT............................................................................................. 28 1 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................................................AGTACAGTCTTTGTAGGCCATCTTA............................................ 25 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................CAACAGTACAGTCTTTGTAGGCCATCT.............................................. 27 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................CCCGTCTTTGTAGGCCATCTTACTTGAT...................................... 28 2 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGGCCATCCTACTTG........................................ 16 2 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................................................GACAGTACAGTCTTTGTAGGCCATCT.............................................. 26 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................TTGTCGGCCATCTTACTTGAT...................................... 21 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................CAGTCTTTGTAGGCCAGC............................................... 18 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................GTACAGTCTTTGTAGGCCATCTTA............................................ 24 0 20 0.05 1 0 0 0 1 0 0
.....................................................................................................................................................................................CAGTACAGTCTTTGTAGGCCATCTTAC........................................... 27 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................CCTTGTAGGCCATCTTACTTGAT...................................... 23 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................GGACGACAGTACAGTCTTTGTAGGCCA................................................. 27 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................TGGTAGGCCATCTTACTTGAT...................................... 21 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................................................CGACAGTACAGTCTTTGTAGGCC.................................................. 23 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTGCGGACGACAGTACAGTCT........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................CGACAGTACAGTCTTTGTAGGCCATC............................................... 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTTGATC..................................... 29 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................CAGTCTTTGTAGGCCATCTTACTTG........................................ 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................TTGTAGGCCATCTTACTTGA....................................... 20 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TTCGACGTAGTTATTTCCAC..................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGGTCTTTGTAGGCCATCTTACTTGAT...................................... 27 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................CTGTGTAGGCCATCTTACTTGAT...................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................GTAGGCCATCTTACTTGATT..................................... 20 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................TGTAGGCCATCTTACTTGAT...................................... 20 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................CTTGTAGGCCATCTTACTTG........................................ 20 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................GTTGTAGGCCATCTTACTTGA....................................... 21 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................AACAGTCTTTGTAGGCCATCGT............................................. 22 2 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................CTTGTAGGCCATCTTACTTGAT...................................... 22 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................AACAGTCTTTGTAGGCCATCTTACTTGAT...................................... 29 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................GGACGACAGTACAGTCTTTGT....................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................GTACAGTCTTTGTAGGCCATCTT............................................. 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................CCTTTGTAGGCCATCTTACTTGAT...................................... 24 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................TTCTTTGTAGGCCATCTTACTTGAT...................................... 25 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCT.............................................. 20 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................GTCTTTGTAGGCCATCTTACTTGA....................................... 24 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................ACAGTCTTTGTAGGCCATCTTACTTGAG...................................... 28 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:368995-369245 - dmo_1295 GGAATGAACAGTGAGGCCTCTTGAATGCAGCAAAAATGGCCAATAAGTCAG------------------------------TAGGAATGGTTGATGGACATAGTTAACTGGGTTTTC------------------------GCCATCAGTATTGCTTATTTATGCC--AATTTACCTACACATTTAAATATAGTACACGTTGAAGCTGCATCAATAAAGGTGCTGCTCACCCCTGCTGTCATGTCAGAAACATCCGGTAGAATGAACTAATATTTGTGTATTAATTGCCAAGTCG-TAAACTTGTATG
droVir3 scaffold_12875:7241611-7241662 + CCACACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTAGCTACGCATAATTGCTGCGGCAATAAAGTTG---------------------------------------------------------------------------------CTGCT
droWil2 scf2_1100000004853:36179-36240 + AACAGGGAG------GCCTCGTGGATATACCACTACTGGCCGACAAATCGATGAAGATATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGG-------------------------------------------------------AC
dp5 XL_group3a:2311245-2311293 - GTTGTAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTGCTGCTTACGCGTGCAATTAAATATGAAAT-------------------------------------------------------AT
droPer2 scaffold_11:2369097-2369145 + GTTGTAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTGCTGCTTACGCGTGCAATTAAATATGAAAT-------------------------------------------------------AT
droAna3 scaffold_12911:819180-819274 + CGAATCAAAAT-------------------------TGATCAAAGAAACAAAAGGGGACTTGAAAATTTCGTAGGTACCTTTTAT------------AAATGTTTA-TTTATTTTGC------------------------GAAGACAG-------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTT
droBip1 scf7180000393639:27044-27074 - GTTCACC------------------------------------------------------------------------------------------------------GGGCTTGC------------------------GCCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------TATTGCTT
droKik1 scf7180000302355:592247-592315 + GGAATCAAAGGCCGAGCTCTGTTAGTCCAGTCAGGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAATAAGCGACAAGTGAGTGG----------------------------------------------------------------ATATAATT
droEle1 scf7180000491104:2163553-2163702 - GTCTTTTAA---------------ATACAGTGAATACAGTAAATAAGTCGG------------------------------TGCGAATGAGGCT---------GTT---GCTGAGGCTCGGTGGCTAATGCTGATGCTTCAGCCATTCGTGTTGATGGTGGAGGC---GGCTTGCTGACAGGCTGAGATTTAT-------------------------------------------TACCTGGCATGGAGC-------------------------------------------------------TG
droRho1 scf7180000778486:971-1047 - TTAAATT--------------------CAGCGTAATTCGCCGATAAGATAA------------------------------TACTAGTTGTATTTGTAAATATATA-----------------------------------------------------------------------------------------------------------------------------------ATTGGGTTTAAGC--------------------------------------------------TTTTAATA
droBia1 scf7180000301241:20843-20893 + GTAAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------CTAATATTTATTTATTATTTTTCAAAGGGAGGG-ACATGTAG
droTak1 scf7180000415805:576365-576442 + AATTGATTA--------------------------------------------------------------------------GGATTAGCCGAGCGACATGCTTAACTGCGTTTGC------------------------TCCACAGATTGTCTTTGTTTATGCCCGGA------------------------------------------------------------------------------------------------------------------------------------TTTGCC
droEug1 scf7180000409057:3718-3762 - GAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATATTCGGGTATTAGCTGCCGAATGG-TTAC---CTTAT
droSec2 scaffold_6:1671497-1671543 + AACGAATTA-----------------------------------------A------------------------------TAATAACTGTTTTT---------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------A---ACCAAGTCA-AAAAATTCTATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGAATGAACAGTGAGGCCTCTTGAATGCAGCAAAAATGGCCAATAAGTCAG------------------------------TAGGAATGGTTGATGGACATAGTTAACTGGGTTTTC------------------------GCCATCAGTATTGCTTATTTATGCC--AATTTACCTACACATTTAAATATAGTACACGTTGAAGCTGCATCAATAAAGGTGCTGCTCACCCCTGCTGTCATGTCAGAAACATCCGGTAGAATGAACTAATATTTGTGTATTAATTGCCAAGTCG-TAAACTTGTATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCC....................................................................................................................................................................24122.583121000100
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCATC.................................................................................................................................................................27121.33161300030
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCATC................................................................................................25201.25251400074
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCA..................................................................................................23201.15231800023
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GC.....................................................................................................................................................................23120.678800000
..........................................ATAAGTCAG------------------------------TAGGAATGGTTGATGGA..................................................................................................................................................................................................................2620.501100000
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGC...................................................................................................22200.5010600040
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCA...................................................................................................................................................................25120.506600000
........................................CAATAAGTCAG------------------------------TAGGAATGGTT........................................................................................................................................................................................................................2220.501100000
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGA...............................................23200.459900000
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCAT.................................................................................................24200.408700010
.................................................................................................ACATAGTTAACTGGGTTTTC------------------------GCC....................................................................................................................................................................23120.253200010
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCATCA...............................................................................................26200.255400001
...................................................................................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTA.........................24180.224300010
...................................................................................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTAAT.......................26150.203300000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCAT..................................................................................................................................................................26120.172100010
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGTA.................................................21200.153300000
...................................................................................................................................................................................................................................................................GAATGAACTAATATTTGTGTATTAATT......................27150.132100010
..............................................................................................................................................................TTTATGCC--AATTTACCTACACATTTAA.........................................................................................................................27170.122200000
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCT.....................................................................................................20200.102000020
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTG....................................................................................................21200.102100001
..............................................................................................................................................................TTTATGCC--AATTTACCTACACATT............................................................................................................................24200.102200000
...........................................................................................................................................................................................................................................CTGTCATGTCAGAAACATCCGG...................................................22200.102200000
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAATGA...........................................27200.102100010
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCATCAA..............................................................................................27200.102200000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCATA.................................................................................................................................................................27120.081100000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCATCAG...............................................................................................................................................................29120.081100000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCATCAT...............................................................................................................................................................29120.081100000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------GCCATCA................................................................................................................................................................28120.081100000
................................................................................................GACATAGTTAACTGGGTTTTC------------------------G......................................................................................................................................................................22120.081100000
............................................................................................GATGGACATAGTTAACTGGGTTTTC------------------------GC.....................................................................................................................................................................27120.081100000
...............................................................................................................................................................................................................................TGCTCACCCCTGCTGTCATGTCAGA............................................................25150.071100000
...........................................................................................................................................................................................................................GTGCTGCTCACCCCTGCTGTCATG.................................................................24150.071100000
...............................................................................................................................................................................................................................TGCTCACCCCTGCTGTCATGTCAGAAAC.........................................................28150.071100000
....................................................................................................................................................................................................................................................................AATGAACTAATATTTGTGTATTAAT.......................25150.071100000
............................................................................................................................................................................................................................TGCTGCTCACCCCTGCTGTCATGTCA..............................................................26150.071100000
.................................................................................................................................................................................................................................................................................TTGTGTATTAATTGCCAAGTCG-TAAAC.......27150.071100000
........................................................................................................................................................................................TAAATATAGTACACGTTGAAGC......................................................................................................22170.061100000
..............................................................................................................................................................TTTATGCC--AATTTACCTACACATTTAAA........................................................................................................................28170.061100000
...........................................................................................................................................................................................ATATAGTACACGTTGAAGCTGCATCAATA............................................................................................29180.061100000
................................................................................................................................................................................................GTACACGTTGAAGCTGCATCAAT.............................................................................................23180.061100000
................................................................................................................................................................................................................................................................GTAGAATGAACTAATATTTGTGTAT...........................25180.061000010
...................................................................................................................................................................................................................................................................GAATGAACTAATATTTGTGTATT..........................23180.061000010
....................................................................................................................................................................................................................................................................AATGAACTAATATTTGTGTATTA.........................23180.061100000
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAA..............................................24200.051000010
............................................................................................................................................................................................TATAGTACACGTTGAAGCTGCAT.................................................................................................23200.051100000
................................................................................................................................................................................................................................................ATGTCAGAAACATCCGGTAGA...............................................21200.051100000
............................................................................................................................................................................................TATAGTACACGTTGAAGCTGCATCAA..............................................................................................26200.051100000
..............................................................................................................................................................TTTATGCC--AATTTACCTACACA..............................................................................................................................22200.051100000
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGC..................................................20200.051100000
..............................................................................................................................................................................................................................................TCATGTCAGAAACATCCGGTAGAAT.............................................25200.051100000
...............................................................................................................................................................................................................................................CATGTCAGAAACATCCGGTAGA...............................................22200.051100000
...............................................................................................................................................................................................AGTACACGTTGAAGCTGCATC................................................................................................21200.051000010
............................................................................................................................................................................................TATAGTACACGTTGAAGCTGCA..................................................................................................22200.051100000
................................................................................................................................................................................................................................................ATGTCAGAAACATCCGGTA.................................................19200.051100000
............................................................................................................................................................................................TATAGTACACGTTGAAGCTGCATCA...............................................................................................25200.051100000
............................................................................................................................................................................................TATAGTACACGTTGAAGCTGCATC................................................................................................24200.051000010
..............................................................................................................................................................TTTATGCC--AATTTACCTACACAT.............................................................................................................................23200.051100000
.......................................................................................................................................................................................................................................CCTGCTGTCATGTCAGAAACATCC.....................................................24200.051100000
droVir3
CCACACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTAGCTACGCATAATTGCTGCGGCAATAAAGTTG---------------------------------------------------------------------------------CTGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droWil2
AACAGGGAG------GCCTCGTGGATATACCACTACTGGCCGACAAATCGATGAAGATATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGG-------------------------------------------------------ACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GTTGTAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTGCTGCTTACGCGTGCAATTAAATATGAAAT-------------------------------------------------------ATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GTTGTAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTGCTGCTTACGCGTGCAATTAAATATGAAAT-------------------------------------------------------ATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CGAATCAAAAT-------------------------TGATCAAAGAAACAAAAGGGGACTTGAAAATTTCGTAGGTACCTTTTAT------------AAATGTTTA-TTTATTTTGC------------------------GAAGACAG-------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................GGGGACTTGAAAATTTCGTAGGTACC.....................................................................................................................................................................................................................................2611.001100000
droBip1
GTTCACC------------------------------------------------------------------------------------------------------GGGCTTGC------------------------GCCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------TATTGCTTSizeHit CountTotal NormTotal
No Reads
droKik1
GGAATCAAAGGCCGAGCTCTGTTAGTCCAGTCAGGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAATAAGCGACAAGTGAGTGG----------------------------------------------------------------ATATAATTSizeHit CountTotal NormTotal
No Reads
droEle1
GTCTTTTAA---------------ATACAGTGAATACAGTAAATAAGTCGG------------------------------TGCGAATGAGGCT---------GTT---GCTGAGGCTCGGTGGCTAATGCTGATGCTTCAGCCATTCGTGTTGATGGTGGAGGC---GGCTTGCTGACAGGCTGAGATTTAT-------------------------------------------TACCTGGCATGGAGC-------------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droRho1
TTAAATT--------------------CAGCGTAATTCGCCGATAAGATAA------------------------------TACTAGTTGTATTTGTAAATATATA-----------------------------------------------------------------------------------------------------------------------------------ATTGGGTTTAAGC--------------------------------------------------TTTTAATASizeHit CountTotal NormTotal
No Reads
droBia1
GTAAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------CTAATATTTATTTATTATTTTTCAAAGGGAGGG-ACATGTAGSizeHit CountTotal NormTotal
No Reads
droTak1
AATTGATTA--------------------------------------------------------------------------GGATTAGCCGAGCGACATGCTTAACTGCGTTTGC------------------------TCCACAGATTGTCTTTGTTTATGCCCGGA------------------------------------------------------------------------------------------------------------------------------------TTTGCCSizeHit CountTotal NormTotal
No Reads
droEug1
GAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATATTCGGGTATTAGCTGCCGAATGG-TTAC---CTTATSizeHit CountTotal NormTotal
No Reads
droSec2
AACGAATTA-----------------------------------------A------------------------------TAATAACTGTTTTT---------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------A---ACCAAGTCA-AAAAATTCTATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/18/2015 at 12:09 AM