ID:

dmo_129

 Coordinate:

scaffold_6540:4939726-4939796 -

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.8 -39.9 -39.9

Flybase annnotation

intron [Dmoj\GI23585-in]

No Repeatable elements found

Sense Strand Reads

TTCCTGAACAAGGAGTGTGGGTTGTGCAAAAATATGTGAGATCTCGGGTTTGTTGCACGACGAGGCAGCTGCTCCACATACCAAACTCAAATATGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTTAAGACGACGTGACCCCAGCCACTCCCAGTGATAAGCAACA

***********************************..(((((((((((.(((..((((((.(((((((((((......................)))))))))))))).)))...))).)))))))))))....************************************* 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V041

embryo

 V056

head

 V049

head

 V110

male body
..................................................TGTTGCACGACGAGGCAGCTGC................................................................................................... 22 0 1 73.00 73 36 27 6 1 3 0
..................................................TGTTGCACGACGAGGCAGCTG.................................................................................................... 21 0 1 56.00 56 48 1 2 3 1 1
..................................................TGTTGCACGACGAGGCAGCTGCT.................................................................................................. 23 0 1 9.00 9 6 3 0 0 0 0
..................................................TGTTGCACGACGAGGCAGCT..................................................................................................... 20 0 1 8.00 8 4 0 0 2 1 1
..................................................TTTTGCACGACGAGGCAGCTGC................................................................................................... 22 1 1 8.00 8 0 8 0 0 0 0
...................................................GTTGCACGACGAGGCAGCTGC................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0
................................................................................................AGCTGTCTCTCGTTGTTTTCGAT.................................................... 23 0 1 4.00 4 1 3 0 0 0 0
..................................................TGTTGCACGACGAGGCAGCTGCC.................................................................................................. 23 1 1 2.00 2 0 2 0 0 0 0
...................................................GTTGCACGACGAGGCAGCTGCT.................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
...................................................GTTGCACGACGAGGCAGCTG.................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
.................................................CTGTTGCACGACGAGGCAGCTGC................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..................................................TTTTGCACGACGAGGCAGCTGCT.................................................................................................. 23 1 1 2.00 2 0 2 0 0 0 0
.................................................CTGTTGCACGACGAGGCAGATG.................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...........................................TCGGGTTTGTTGCACGACGAGGC......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TGTTGCACGACGAGGCAGCTA.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGTTGCACGACGAGGCAGTTG.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AGCTGTCTCTCGTTGTTTTCGATT................................................... 24 0 1 1.00 1 0 0 1 0 0 0
..................................................TGTTTCACGACGAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...................................................GTTGCACGACGAGGCAGCT..................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................GGTTGCACGACGAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTCGCACGACGAGGCAGCTGC................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTTGCACGACGAGGCAGCT..................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
................................................................................................AGCTGTCTCTCGTTGTTTTC....................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................GCTGTCTCTCGTTGTTTTCGA..................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................TGTTACACGACGAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......................TGTGCAAAAATATGTGAGATCTCGGGTT......................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................................................TTTGGCACGACGAGGCAGCTGC................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCCTGCACGACGAGGCAGCTG.................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
.............................................GATCTTGTTGCACGACGAGGCAGCTGC................................................................................................... 27 3 1 1.00 1 0 1 0 0 0 0
..................................................TATTGCACGACGAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TGTTGCACGACTAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................TTAAGACGACGTGACCCCAGCCA................... 23 0 1 1.00 1 0 0 0 0 0 1
..................................................TGTTGCACGACGAGCCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TGTTGCACGACGAGGAAGCTGG................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGCTGCACGACGAGGCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................TTAAGACGACGTGACCCCAGCCACTCC............... 27 0 1 1.00 1 1 0 0 0 0 0
..................................................TGTTGCACGACGAGGCCGCTGC................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.................................................TTGTTGCACGACGAGGCAGCTGC................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.................................................TTGTTGCACGACGAGGCAGCTG.................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................CAGCTGTCTCTCGTTGTTTTCGA..................................................... 23 0 1 1.00 1 1 0 0 0 0 0
TTCCTGAACAAGGAGTGTGGGT..................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
..................................................TGTTGCACGACGAGGCAGCTGTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGTTGCACGACGAGGCAGC...................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
..................................................TGTTGCACGACGAGTCAGCTGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...................................................TTTTCACGACGAGGCAGCTG.................................................................................................... 20 2 2 0.50 1 0 1 0 0 0 0
....TGAACACGGAGGGTGGTTTG................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0
..............GTGCGGGTCGTGGAAAAATA......................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 1

Anti-sense strand reads

AAGGACTTGTTCCTCACACCCAACACGTTTTTATACACTCTAGAGCCCAAACAACGTGCTGCTCCGTCGACGAGGTGTATGGTTTGAGTTTATACGTCGACAGAGAGCAACAAAAGCTAAAGCCCTAGAAATTCTGCTGCACTGGGGTCGGTGAGGGTCACTATTCGTTGT

*************************************..(((((((((((.(((..((((((.(((((((((((......................)))))))))))))).)))...))).)))))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body
......................................................CGTGGTGGTCCGTCGACG................................................................................................... 18 2 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:4939676-4939846 - dmo_129 confident TTC-CTGAACAAGGAGTG----------T----------------------GG----------GTTGTGC-AAA----------------------AATA-TGTGAGATCTCGGGTTTGTTGCACGACGAGGCAGCTGCTCCACA---------TA----------CC---------A----------------------------------------------------------------------------------------------------------AA-CT-CAAATATGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTTAAGACGACG---------------------------TGACCCCAGCCA---------CTCCC-AGTGATAAGC--AAC-A
droVir3 scaffold_13047:936843-937018 - AT------CAAGGGAGTG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGATCTCGGGTTTGTTGCACGACGAGGCAGCTGCTCCAAA---------TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTTGCGACAACGT--GATC-------------------------CCAACCATCCCGGCCGTGACCCAGTGATAAGC--A---A
droGri2 scaffold_14906:5355404-5355604 + TTA-G--------GAGTG----------TG-------------------CATGTAATTGGCTGGTTGAGA-TATATATATATATATATATGTATATATAT-TGTGAGATCTCGGGTTTGTTGCACGACGTGGCAGCTGCTCCAAA---------TG----------CA---------A----------------------------------------------------------------------------------------------------------AAACT-CGAAAACGCAGCTGTCTCTCGATGTTTTCGATTTCGGGATCTTGTCATCGGCG---------------------------TGACCTCAACCAACCAAAC----------TAATCAACTAATC-A
droWil2 scf2_1100000004902:91563-91744 - --------------TTCT----------TT-------------------GTGT----------GTTGC-C-AAG----------------------CGTCCTATAAGATCTCGGGTTTGTTGCACGATGAGACAGCCGCTAAACCCCC-CCT--TGCCACACCCTCT----------TTG----C----A-ATGGTAAATACCTCCCTT--TCGAA-AT-------------TGTT---------------------------------------------------AT-TATTTATGCCGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTATTTACGACC---CAGTGA--------------------------------------------------------------
dp5 2:7251727-7252004 - --------------TGTGCGAGAGAGTGTACGAGAGTATATCTAATCTATAGA----------GTTTT-CCATG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTCCAGACCCACCTCTTT----------------------------------------------------CCC-AGCAGACGCCATTGTGATGATGTTGTTGATGATGATGATGAGGAGGAGGAGAGAAGGAGGAGGAGGGCTTATCCACT-TGCAAACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CATTAAC--------------CATTG-------------GAACCACTACG-AATACA--AATATA--T
droPer2 scaffold_0:1112328-1112589 - ---------------GTG----------TACGAGAGTATATCTAATCTATAGA----------GTTTT-CCATG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTCCAGACCCACCTCTTT----------------------------------------------------CCC-AGCAGACGCCATTGTGAT------GTTGATGATGATGATGAGGAGGAGGAGAGAAGGAGGAGGAGGGCTTATCCACT-TGCAAACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CATTAAC--------------CATTG-------------GAACCACTACG-AATACG--AATATAT-A
droAna3 scaffold_13340:938714-938905 + TAC-AGA----TACAGTG----------CC-------------------T--------------GTGT-C-CAG----------------------CGCC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCTC--CT---GGGGGAGCCCGTA--A------AAA----C----AAAAGACAAACAGCCCACTC--CCAGA-AA-----------------------------------------------------------------TA-CT-ATAATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGGCGCATCATCGA--TA-----TA---------------------------------------------------
droBip1 scf7180000394085:58806-58995 - CC------------CGTG----------TC-------------------CAGC----------G-TGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAGCCTCC--C--------------GGGGGAGGGGAAAAACAAAC----AGC-----------CCACTC--CCAGA-AA-----------------------------------------------------------------AG-CT-TCCATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGGCGC---ATCCACCAT-----T-ACGA-------------------------------GGGATTA-----C-CA
droKik1 scf7180000302475:1404674-1404875 + TGT-GTATCCAGCAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAGCCCCT-CCACATG-------------GAAAACAAAAATAATAAAATATAA-----------TACTCCC-CCCA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CTACAGA---CGATCTAAA-------------------------------------------------
droFic1 scf7180000453800:2293382-2293554 + --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCTC-CC--------------ACAAGA------AAA----C----AGAA-----------TACACCCACA-A-AC-----------------------------------------------------------------CCCAT-TTAATACTCAACTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--AATCGA--TT-----TGAAGAC----------------------------------------------
droEle1 scf7180000490995:524612-524789 - --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-----------------ACGAGA------AAA----C----AAAA-----------TACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--AGTCGA--TC-----TGAAGACCATG--------------------------------A-----C-CC
droRho1 scf7180000777158:35527-35696 - --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-----------------ACGAGA------AAA----C----AAAA-----------TACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--TC-----TGAAGAC----------------------------------------------
droBia1 scf7180000302402:8304642-8304838 + --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAAGCCCC-CCTCC-G-AGG-----AC---AGAAAAAAAA----C----AAAA-----------GACCCACCCACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CTTCGA--TTCGATCCGAAGACCCTG--------------------------------A-----C-CC
droTak1 scf7180000415380:1425653-1425834 - ----------------------------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAAGCCCC--C--------------ACAAGA------AAA----C----AAAA-------A--CTACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--TTTGATGTGAAGACCCTG--------------------------------A-----C-CC
droEug1 scf7180000409692:687983-688177 + --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-CTT--TG---T-----ATAAAA------AAACAA--------AC-------AATCTACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGA--TATCAAACTTTGATCTGAAGACCCTG--------------------------------A-----C-CC
dm3 chr3R:6216951-6217131 + --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTAAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CC
droSim2 3r:14862283-14862463 - --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CC
droSec2 scaffold_0:15728327-15728507 - --------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGATAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CC
droYak3 3R:10242705-10242897 + TGT---ATCTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC--A--------------GCA---------AAACAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CC
droEre2 scaffold_4770:15403319-15403516 - TCTTGTATCTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCGCC-CC--------------GCA---------AAACAATT----AAAA-------A--ATACACCC-CGCA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTC-CTGAACAAGGAGTG----------T----------------------GG----------GTTGTGC-AAA----------------------AATA-TGTGAGATCTCGGGTTTGTTGCACGACGAGGCAGCTGCTCCACA---------TA----------CC---------A----------------------------------------------------------------------------------------------------------AA-CT-CAAATATGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTTAAGACGACG---------------------------TGACCCCAGCCA---------CTCCC-AGTGATAAGC--AAC-ASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................................................TGTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................22173.007336631270
.....................................................................................................................TGTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................21156.00564821311
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCT..................................................................................................................................................................................................................................................................................2319.009600030
.....................................................................................................................TGTTGCACGACGAGGCAGCT.....................................................................................................................................................................................................................................................................................2018.008401201
......................................................................................................................GTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................2115.005500000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGAT............................................................................................2314.004100030
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCC..................................................................................................................................................................................................................................................................................2312.002000020
......................................................................................................................GTTGCACGACGAGGCAGCTGCT..................................................................................................................................................................................................................................................................................2212.002200000
......................................................................................................................GTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................2012.002200000
..............................................................................................................TCGGGTTTGTTGCACGACGAGGC.........................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................TGTTGCACGACGAGGCAGCTA....................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGATT...........................................................................................2411.001010000
......................................................................................................................GTTGCACGACGAGGCAGCT.....................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTC...............................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................GCTGTCTCTCGTTGTTTTCGA.............................................................................................2111.001100000
.................................................................TGTGC-AAA----------------------AATA-TGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................................................................................................................................................................................................................................................TTAAGACGACG---------------------------TGACCCCAGCCA---------.......................2311.001000001
............................................................................................................................................................................................................................................................................................................................................TTAAGACGACG---------------------------TGACCCCAGCCA---------CTCC...................2711.001100000
....................................................................................................................TTGTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................TTGTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................CAGCTGTCTCTCGTTGTTTTCGA.............................................................................................2311.001100000
TTC-CTGAACAAGGAGTG----------T----------------------GG----------GT.............................................................................................................................................................................................................................................................................................................................................................2211.001000100
.....................................................................................................................TGTTGCACGACGAGGCAGC......................................................................................................................................................................................................................................................................................1911.001000100
droVir3
AT------CAAGGGAGTG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGATCTCGGGTTTGTTGCACGACGAGGCAGCTGCTCCAAA---------TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTTGCGACAACGT--GATC-------------------------CCAACCATCCCGGCCGTGACCCAGTGATAAGC--A---ASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................TGTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................211441.004417034002406270000001004019314184137242314277151681221000000000000000000000000000020211312261000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................221180.001800032800026250001412321140610182091251011032001000000000000000000040000000002002000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGAT............................................................................................231143.001430000000000000000000000000000001000000000000000000100000000010000000043291117221800000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGA.............................................................................................22188.0088000000100000001000000000001000000000000000000000000000000000000000002213118102100000
.....................................................................................................................TGTTGCACGACGAGGCAGCT.....................................................................................................................................................................................................................................................................................20178.00780050002121101000010070512142463507433212000000000000000000000200000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCT..................................................................................................................................................................................................................................................................................23137.00370011020000100000000010301138212420000001000000000000000000010100000001000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGT...................................................................................................................................................................................................................................................................................22115.00150010000000000000000010301022100000110001000000000000000000000100000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTA....................................................................................................................................................................................................................................................................................21112.00120000001000200000000000002000000010112100000000000000000000010000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCA..................................................................................................................................................................................................................................................................................2318.0080010000010000000000000000001000000003200000000000000000000000000000000000000000
....................................................................................................................TTGTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................2218.0080000000000100000000000000001000000000000000000000000000000000000000000033000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCG..............................................................................................2117.0070000000000000000000000000001000000000000000000000000000000000100000021002000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCAA.................................................................................................................................................................................................................................................................................2417.0070010000000000000000000000111000000002010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CAGCTGTCTCTCGTTGTTTTCGAT............................................................................................2417.0070000000010000000000000000000000000000000000000000000000000000000000032001000000
.....................................................................................................................TGTTGCACGACGAGGCAGC......................................................................................................................................................................................................................................................................................1917.0070001000000000000000000000010001010100000000000000000000000000000000020000000000
..................................................................................................................................................................................................................................................................................................................................TTCGGGATCTTTGCGACAACGT--GA..................................................................2416.0060000001000000000000000000100000000000010000000000000000000000000300000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGATA...........................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000001030000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCTA.................................................................................................................................................................................................................................................................................2414.0040000000000000000000000001000000000002100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CAGCTGTCTCTCGTTGTTTTCG..............................................................................................2213.0030000001000000000000000000001000000000000000000000000000000000000000010000000000
..................................................T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGATC................................................................................................................................................................................................................................................................................................................2513.0030010000000000000000000000000000000000000000000000000000000000000000000002000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCTT.................................................................................................................................................................................................................................................................................2413.0030010000000000000000000000000110000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTT....................................................................................................................................................................................................................................................................................2113.0030000000000000000000000001000000110000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCAAA................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000110000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CAGCTGTCTCTCGTTGTTTTCGA.............................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000010100000000
.................................................................TGAGA-GAC----------------------AATG-TGTGAGATCTCGGG...........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000011000000000000000000000000000000000000000000000000000000
......................................................................................................................GTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCACGACGAGGCAGCTGCTCCAAA---------T...................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTC....................................................................................................................................................................................................................................................................................2112.0020000000001000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................GTTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGCGACAACGT--GATC-------------------------CCAACCATC..............................2512.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
..................................................................................................TG-TGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................AATG-TGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2012.0020000000000000001000000001000000000000000000000000000000000000000000000000000000
............................C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGATC................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000001100000
.............................................................................................................................................................................................................................................................................................................................................TGCGACAACGT--GATC-------------------------CCAACCATCCCGGC.........................2912.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
................TG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGA..................................................................................................................................................................................................................................................................................................................2612.0020010000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................A---------TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGCAGCTGTC............................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000200000000000000
......................................................................................................................GTTGCACGACGAGGCAGCT.....................................................................................................................................................................................................................................................................................1912.0020010000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................GAC----------------------AATG-TGTGAGATCTCGGGTTTGT......................................................................................................................................................................................................................................................................................................2612.0020010000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................TTGTTGCACGACGAGGCAGCT.....................................................................................................................................................................................................................................................................................2112.0021000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TACGCAGCTGTCTCTCGA......................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000030000000000
.........AAGGGAGTG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-T........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGATCT...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................................TTGTTGCACGACGAGGCAG.......................................................................................................................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GAC----------------------AATG-TGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................TTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGCGACAACGT--GATC-------------------------CCAAC..................................2111.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTAA...................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................AC----------------------AATG-TGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
................TG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGAGAT.................................................................................................................................................................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGATT...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................TCTTTGCGACAACGT--GATC-------------------------CCAACCATCC.............................2911.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCTCT................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGTC..................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
................TG----------C---------------------T-G----------GTTGAGA-GAC----------------------AATG-TGTGA....................................................................................................................................................................................................................................................................................................................2411.0010000010000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TC-------------------------CCAACCATCCCGGCCGTGACCCAG...............2611.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................................TTGTTGCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................TGTTTTCGATTTCGGGATCTTTGCGA............................................................................2611.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGCAGCTGTC............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................AC----------------------AATG-TGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................TTCGGGATCTTTGCGACAACGT--GAAA-------------------------.......................................2611.0010000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................GAGA-GAC----------------------AATG-TGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGCGACAACGT--GATC-------------------------CCAACCAT...............................2411.0010000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TCTCGTTGTTTTCGATTTCGGGATCT..................................................................................2611.0010000100000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCACGACGAGGCAGCTGC...................................................................................................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TGAGATCTCGGGTTTGTTGCACGACGA............................................................................................................................................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAG.......................................................................................................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCTTT................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCAAATACGCAGCTGTCTCTCGTTGTT..................................................................................................2711.0010000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGCAGCTG..............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................TGTTGCACGACGAGGCAGCTGCTTTT...............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................GAC----------------------AATG-TGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................TACGCAGCTGTCTCTCGTTGTTTTCGAT............................................................................................2811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGAGA-GAC----------------------AATG-TGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................TTGCACGACGAGGCAGCTG....................................................................................................................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TCCAAA---------TG----------CC---------AAATA----------------------------------------------------------------------------------------------------------TTCAAATACGC...................................................................................................................2611.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
.........................................................................C----------------------AATG-TGTGAGATCTCGG............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................TGCACGACGAGGCAGCTGCAA.................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................GCACGACGAGGCAGCTGAAA.................................................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000010000000000000
droGri2
TTA-G--------GAGTG----------TG-------------------CATGTAATTGGCTGGTTGAGA-TATATATATATATATATATGTATATATAT-TGTGAGATCTCGGGTTTGTTGCACGACGTGGCAGCTGCTCCAAA---------TG----------CA---------A----------------------------------------------------------------------------------------------------------AAACT-CGAAAACGCAGCTGTCTCTCGATGTTTTCGATTTCGGGATCTTGTCATCGGCG---------------------------TGACCTCAACCAACCAAAC----------TAATCAACTAATC-ASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................................TCCAAA---------TG----------CA---------A----------------------------------------------------------------------------------------------------------AAACT-CGAAAACGC...................................................................................................................2511.00110
.....................................................................................................................TGTTGCACGACGTGGCAGCTGC...................................................................................................................................................................................................................................................................................2211.00110
..........................................................................................................................................................TG----------CA---------A----------------------------------------------------------------------------------------------------------AAACT-CGAAAACGCAGCT...............................................................................................................2311.00110
.....................................................................................................................TGTTGCACGACGTGGCAGCTGCTT.................................................................................................................................................................................................................................................................................2411.00110
droWil2
--------------TTCT----------TT-------------------GTGT----------GTTGC-C-AAG----------------------CGTCCTATAAGATCTCGGGTTTGTTGCACGATGAGACAGCCGCTAAACCCCC-CCT--TGCCACACCCTCT----------TTG----C----A-ATGGTAAATACCTCCCTT--TCGAA-AT-------------TGTT---------------------------------------------------AT-TATTTATGCCGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTATTTACGACC---CAGTGA--------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................AAG----------------------CGTCCTATAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2412.00210100
................CT----------TT-------------------GTGT----------GTTGC-C-AAG----------------------CGTCCTATAA....................................................................................................................................................................................................................................................................................................................2711.00100100
.............................................................................................................CTCGGGTTTGTTGCACGATGAGAC.........................................................................................................................................................................................................................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................................................GTCTCTCGTTGTTTTCGATT...........................................................................................2011.00100010
.....................................................................................................................TGTTGCACGATGAGACAGCCG....................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................TGTTGCACGATGAGACAGCCGCT..................................................................................................................................................................................................................................................................................2311.00100010
................................................................TTGC-C-AAG----------------------CGTCCTATAAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2811.00100100
........................................................................AG----------------------CGTCCTATAAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2211.00100001
.................................................................................................................GGTTTGTTGCACGATGAGAC.........................................................................................................................................................................................................................................................................................2011.00100010
................CT----------TT-------------------GTGT----------GTTGC-C-AAG----------------------CGTCCTATAAG...................................................................................................................................................................................................................................................................................................................2811.00100100
.................................................................................................GTCCTATAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2011.00101000
.................................................................................................GTCCTATAAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................1911.00100010
...................................................GT----------GTTGC-C-AAG----------------------CGTCCTATAAGA..................................................................................................................................................................................................................................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................................................TGTCTCTCGTTGTTTTCGATTTCGGG......................................................................................2611.00100001
.....................................................................................................................TGTTGCACGATGAGACAGC......................................................................................................................................................................................................................................................................................1911.00100010
.................................................................TGC-C-AAG----------------------CGTCCTATAAGAT.................................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................CGTCCTATAAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2011.00110000
dp5
--------------TGTGCGAGAGAGTGTACGAGAGTATATCTAATCTATAGA----------GTTTT-CCATG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTCCAGACCCACCTCTTT----------------------------------------------------CCC-AGCAGACGCCATTGTGATGATGTTGTTGATGATGATGATGAGGAGGAGGAGAGAAGGAGGAGGAGGGCTTATCCACT-TGCAAACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CATTAAC--------------CATTG-------------GAACCACTACG-AATACA--AATATA--TSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2218.0080500210000
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................2114.0040300001000
........................................................................................................................................TGCTCCAGACCCACCTCTTT----------------------------------------------------CCC-AGCA......................................................................................................................................................................................................2713.0030300000000
........................................................................................................................TGCACGACGAGACAGTTGCTCCAGAC............................................................................................................................................................................................................................................................................2612.0020200000000
............................................................................................................................................................................................................................................GTTGATGATGATGATGAGGAGGAGGA........................................................................................................................................................2611.0010100000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGT...................................................................................................................................................................................................................................................................................2211.0010000001000
...................................................................................................................................................CACCTCTTT----------------------------------------------------CCC-AGCAGACGCCATTG............................................................................................................................................................................................2611.0010100000000
........................................................................................................GAGATCTCGGGTTTGTTGCACGACG.............................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................CTTGTCAACGACGC--CATTAAC--------------CATTG-------------.............................2611.0010100000000
..................................................................................................TC-AGTGAGATCTCGGGTTTGTTGCACGA...............................................................................................................................................................................................................................................................................................2811.0010100000000
...........................................................................................................................................................................................................................................................................................TCCACT-TGCAAACGCAGCTGTCT...........................................................................................................2311.0010010000000
.........................................................................................................................................................................................................................................................................AAGGAGGAGGAGGGCTTATC.................................................................................................................................2011.0010000001000
...................................................................................................................................................................................................................................................ATGATGATGAGGAGGAGGAGAGAAGGA................................................................................................................................................2711.0010000001000
.............................................................................................................................................................................................................................................................................................CACT-TGCAAACGCAGCTGTCC...........................................................................................................2111.0010010000000
...................................................................T-CCATG----------------------CGTC-AGTGAGATCTCG.............................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................TCTATAGA----------GTTTT-CCATG----------------------CGTC-AGTGA....................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......................................................................................................................................................................................................................................................................................CTTATCCACT-TGCAAACGCA..................................................................................................................2011.0010100000000
.......................................................................................................TGAGATCTCGGGTTTGTTGCACGAC..............................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................CTAATCTATAGA----------GTTTT-CCATG----------------------C.............................................................................................................................................................................................................................................................................................................................2311.0010010000000
................................................................................................CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2011.0010000100000
..................................................................................................................................GACAGTTGCTCCAGACCCACCT......................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................ATGATGATGATGAGGAGGA...........................................................................................................................................................19120.0810100000000
..................................................................................................................................................................................................................................................GATGATGATGAGGAGGAG..........................................................................................................................................................18140.0710100000000
droPer2
---------------GTG----------TACGAGAGTATATCTAATCTATAGA----------GTTTT-CCATG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTCCAGACCCACCTCTTT----------------------------------------------------CCC-AGCAGACGCCATTGTGAT------GTTGATGATGATGATGAGGAGGAGGAGAGAAGGAGGAGGAGGGCTTATCCACT-TGCAAACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CATTAAC--------------CATTG-------------GAACCACTACG-AATACG--AATATAT-ASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................CTCGGGTTTGTTGCACGACGAGAC.........................................................................................................................................................................................................................................................................................2412.002200000
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................2112.002000110
..................................................................................................................................................................................................................................................................................................................................TTCGGGATCTTGTCAACGACG.......................................................................2112.002200000
...........................................................................................................ATCTCGGGTTTGTTGCACGACGA............................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................TTCGGGATCTTGTCAACGAC........................................................................2011.001100000
.................................................................TTT-CCATG----------------------CGTC-AGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2211.001000001
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTCC................................................................................................................................................................................................................................................................................2511.001010000
..................................................................TT-CCATG----------------------CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................CT-TGCAAACGCAGCTGTCTCTCGTTGTT..................................................................................................2811.001010000
.................................................................TTT-CCATG----------------------CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................TGTTGCACGACGAGACAGTTGT...................................................................................................................................................................................................................................................................................2211.001000001
......................................................................................................................................................................................................................................................ATGATGAGGAGGAGGAGAGAAG..................................................................................................................................................2211.001000001
...........................................................................................................ATCTCGGGTTTGTTGCACGACGG............................................................................................................................................................................................................................................................................................2311.001100000
...............................................TATAGA----------GTTTT-CCATG----------------------CGTC-AGTGAGA..................................................................................................................................................................................................................................................................................................................2711.001010000
.........................................................................................................................................................TTT----------------------------------------------------CCC-AGCAGACGCCATTGTGAT------GT................................................................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................................GATGAGGAGGAGGAGAGAAGGAGGA.............................................................................................................................................2511.001000001
droAna3
TAC-AGA----TACAGTG----------CC-------------------T--------------GTGT-C-CAG----------------------CGCC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCTC--CT---GGGGGAGCCCGTA--A------AAA----C----AAAAGACAAACAGCCCACTC--CCAGA-AA-----------------------------------------------------------------TA-CT-ATAATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGGCGCATCATCGA--TA-----TA---------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................21133.003310202811
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................22133.00331631364
.....................................................................................................................TGTTGCACGACGAGACAGTTGCT..................................................................................................................................................................................................................................................................................2313.003100200
.....................................................................................................................TGTTGCACGACGAGACAGTT.....................................................................................................................................................................................................................................................................................2013.003200010
.........................................................................G----------------------CGCC-AGTGAGATCTCGGGTTTGTT.....................................................................................................................................................................................................................................................................................................2512.002200000
......................................................................................................................GTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2112.002100010
..............................................................................................................................................................................................AAAGACAAACAGCCCACTC--C..........................................................................................................................................................................................................2011.001010000
................................................................GTGT-C-CAG----------------------CGCC-AGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................GT-C-CAG----------------------CGCC-AGTGAGATCTCGGGTTAA.......................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................ATACGCAGCTGTCTCTCGTTGTTTTCGA.............................................................................................2811.001010000
...................................................................................................C-AGTGAGATCTCGGGTTTGTTGCACGA...............................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................................................................................................................GACAAACAGCCCACTC--CCAGA-.....................................................................................................................................................................................................2111.001010000
.....................................................................................................................................AGTTGCTAAACCCTC--CT---GGGGGA.............................................................................................................................................................................................................................................................2311.001001000
..................................................................GT-C-CAG----------------------CGCC-AGTGAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................2511.001000010
.............................................................................................................................GACGAGACAGTTGCTAAACCCTC--CT---GGG................................................................................................................................................................................................................................................................2811.001010000
.....................................................................................................................................................................................................................................................................................................................CGTTGTTTTCGATTTCGGGATC...................................................................................2211.001010000
.....................................................................................................................TGTTGCACGACGAGACAGTTT....................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................TACGCAGCTGTCTCTCGTTG....................................................................................................2011.001100000
.....................................................................................................................................AGTTGCTAAACCCTC--CT---GGGGG..............................................................................................................................................................................................................................................................2211.001001000
................................................................................................CGCC-AGTGAGATCTCGGGTTTGTTGCAC.................................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................GCC-AGTGAGATCTCGGGTTTGTTGCACG................................................................................................................................................................................................................................................................................................2811.001010000
.....................................................................................................................................AGTTGCTAAACCCTC--CT---GG.................................................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................................................................................................................................................................................................TTTCGGGATCTTGTCAACG..........................................................................1911.001001000
...........................................................................................................................................TAAACCCTC--CT---GGGGGAGCCC.........................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................CTTGTCAACGGCGCATCATCGA--T...........................................................2311.001000010
..............................................................................................................................................................................................AAAGACAAACAGCCCACTC--CCAGA-.....................................................................................................................................................................................................2411.001010000
droBip1
CC------------CGTG----------TC-------------------CAGC----------G-TGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAGCCTCC--C--------------GGGGGAGGGGAAAAACAAAC----AGC-----------CCACTC--CCAGA-AA-----------------------------------------------------------------AG-CT-TCCATACGCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGGCGC---ATCCACCAT-----T-ACGA-------------------------------GGGATTA-----C-CASizeHit CountTotal NormTotal
No Reads
droKik1
TGT-GTATCCAGCAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAGCCCCT-CCACATG-------------GAAAACAAAAATAATAAAATATAA-----------TACTCCC-CCCA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGTCAACGACGC--CTACAGA---CGATCTAAA-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCTC-CC--------------ACAAGA------AAA----C----AGAA-----------TACACCCACA-A-AC-----------------------------------------------------------------CCCAT-TTAATACTCAACTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--AATCGA--TT-----TGAAGAC----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-----------------ACGAGA------AAA----C----AAAA-----------TACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--AGTCGA--TC-----TGAAGACCATG--------------------------------A-----C-CCSizeHit CountTotal NormTotal
No Reads
droRho1
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-----------------ACGAGA------AAA----C----AAAA-----------TACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--TC-----TGAAGAC----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAAGCCCC-CCTCC-G-AGG-----AC---AGAAAAAAAA----C----AAAA-----------GACCCACCCACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CTTCGA--TTCGATCCGAAGACCCTG--------------------------------A-----C-CCSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAAGCCCC--C--------------ACAAGA------AAA----C----AAAA-------A--CTACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--TTTGATGTGAAGACCCTG--------------------------------A-----C-CCSizeHit CountTotal NormTotal
No Reads
droEug1
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAATCCCC-CTT--TG---T-----ATAAAA------AAACAA--------AC-------AATCTACACC--CACA-AC-----------------------------------------------------------------CCCAT-TTAATACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGA--TATCAAACTTTGATCTGAAGACCCTG--------------------------------A-----C-CCSizeHit CountTotal NormTotal
No Reads
dm3
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTAAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................221294.0029400000000000000000000000000000000000200210020000000400000010000000000000000000010000000000000000000000000000000000000000000100000000000000000000012030811000000000000000000000000000000000010200000000000000000000003014220000000000000000120000310010017000150110242710001231100100060110012100219104001130010000151330202105605000111201001520
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................21199.009900000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000100000000000000000000000000010000020000010000000000000000041011030000101002800000000000000301000020101000010210000113100510220900111101000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCT..................................................................................................................................................................................................................................................................................23169.0069000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201040000000000000000000010000000000000001000000100000000000000000020000000000000000000000000000000510040001002010014000000000000000000010311100000010100001400010481300000010101110
.....................................................................................................................TGTTGCACGACGAGACAGTT.....................................................................................................................................................................................................................................................................................20111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................TCAGCTGTCTCTCGTTGTTTTCG..............................................................................................23111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002000000000000000000000000100100000000000000000000003000010000000000000000000000000000000000010000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAA................................................................................................................................................................................................................................................................................25110.0010000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000100000000000000010000000000000001000
................................................................................................CGTC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2018.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100001000010010000010000000000100100
.................................................................................................GTC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101000001000000000000000000000100100000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTA.................................................................................................................................................................................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGT......................................................................................................................................................................................................................................................................................1914.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100020000000000
..................................................................................................TC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAAAC..............................................................................................................................................................................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................TACTACTCAGCTGTCTCTCGTTGTT..................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTT.................................................................................................................................................................................................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000100000000
................................................................................................................................................................................................................................................................................................T-TTACTACTCAGCTGTCTCTCGTTG....................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCAGCTGTCTCTCGTTGTTTTCGAT............................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................T-TTACTACTCAGCTGTCTCTC........................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGT.............................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................GTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGA...................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAAACC.............................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................CGTC-AGTAAGATCTCGGGT..........................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000
.....................................................................................................................................................................................................................ACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGTC............................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGAT............................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAAA...............................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTCGGGATCTTGACAACGACGC--C...................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GGGTTTGTTGCACGACGAGAC.........................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTTGCTAAACCCCC-----------------GCA---------AAAT.........................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CCCACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTG..............................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................TAAGATCTCGGGTTTGTTGCACGACGA............................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................T-TTACTACTCAGCTGTCTCTCGT......................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTCGATTTCGGGATCTTGACAACGACGC--....................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGT...................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAG----------------------CGTC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................GTTTGTTGCACGACGAGA..........................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................T-C-AAG----------------------CGTC-AGTAAGATCTCGGG...........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCG..............................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................TTTGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAT................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................T-TTACTACTCAGCTGTCTCTCGTTT....................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................C-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-A....................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGTCTC..........................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GT-C-AAG----------------------CGTC-AGTAAGATCTCGGGTTTA.......................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................GTC-AGTAAGATCTCGGGTTTGTTGCAC.................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................TGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CCCACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGT.............................................................................................................2811.001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGCATC................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G----------------------CGTC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................C--CATCGA--AT-----TGAAGACAT............................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TACTCAGCTGTCTCTCGTTGTTTTC...............................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AT-TTACTACTCAGCTGTCTCT.........................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ACGAGACAGTTGCTAAACCCC...........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................TCAGCTGTCTCTCGTTGTTTTC...............................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCGGGATCTTGACAACGACGC--C...................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAG----------------------CGTC-AGTAAGATCTCGGG...........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................TACTACTCAGCTGTCTCTCGTTGTTTT................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CTCAGCTGTCTCTCGTTGT...................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ACTACTCAGCTGTCTCTCGTT.....................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................C-AAG----------------------CGTC-AGTAAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................CACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGCTGTC............................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............GTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGT......................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTGG...................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTCGGGATCTTGACAACGACGC--CA..................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTT....................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCAGCTGTCTCTCGTTGTTTTCGA.............................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................TG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGT......................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................T-TTACTACTCAGCTGTCTCTCGTTGT...................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CAGTTGCTAAACCCCC-----------------GCA---------AAA..........................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................TACTACTCAGCTGTCTCTCGTTGT...................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTCGATTTCGGGATCTTGA...............................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................................CTGTCTCTCGTTGTTTTCG..............................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CCACA-AT-----------------------------------------------------------------CGCAT-TTACTACTCAGC................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTA....................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGT-C-AAG----------------------CGTC-AGTAAGATC................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGA.............................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CAGCTGTCTCTCGTTGTTTTCGATT...........................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCAGCTGTCTCTCGTTGTTTTCT..............................................................................................2311.001000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GTTGCACGACGAGACAGTTGCT..................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................................................................................................................................................................................................................................TACTACTCAGCTGTCTCTCGTTGTTTTC...............................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................TGTTGCACGACGAGACAGTTGCTAA................................................................................................................................................................................................................................................................................2512.00200000000002000000
...................................................................................................................................................................................................................................................................................................TAGTACTCAGCTGTCTCTCGTTGTTTT................................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................TCGGGATCTTGACAACGACGC--CAT.................................................................2411.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................CGC--CATCGA--AT-----TGAAGAC..............................................1811.00101000000000000000
...........................................................................................................................................................................................................................................................................................................AGCTGTCTCTCGTTGTTTTCGAT............................................................................................2311.00100100000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................2111.00100000000000100000
........................................................................AG----------------------CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................................TGTTGCACGACGAGACAGTT.....................................................................................................................................................................................................................................................................................2011.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................CTTGACAACGACGC--CATCGA--............................................................2011.00100010000000000000
droSec2
--------------AGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGATAAACCCCC-----------------GCA---------AAATAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................TGTTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................21174.00741529723
.....................................................................................................................TGTTGCACGACGAGACAGTTGA...................................................................................................................................................................................................................................................................................22163.00632281914
.....................................................................................................................TGTTGCACGACGAGACAGTT.....................................................................................................................................................................................................................................................................................2017.0071303
.....................................................................................................................TGTTGCACGACGAGACAGTTGAT..................................................................................................................................................................................................................................................................................2316.0061302
.....................................................................................................................TGTTGCACGACGAGACAGTTGT...................................................................................................................................................................................................................................................................................2214.0040202
.....................................................................................................................TGTTGCACGACGAGACAGTTGAA..................................................................................................................................................................................................................................................................................2312.0020101
......................................................................................................................GTTGCACGACGAGACAGTTGAT..................................................................................................................................................................................................................................................................................2211.0010001
......................................................................................................................GTTGCACGACGAGACAGTTGA...................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................GATCTCGGGTTTGTTGCACGACGAGACA........................................................................................................................................................................................................................................................................................2811.0011000
.....................................................................................................................TGTTGCACGACGAGACAGT......................................................................................................................................................................................................................................................................................1911.0010001
.....................................................................................................................TGTTGCACGACGAGACAGTTGATA.................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................................................TTGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................1911.0010001
............................................................................................................................................................................................................................................................................................CCCAT-TTAGTACTCAGCTG..............................................................................................................1911.0010010
......................................................................................................................GTTGCACGACGAGACAGTTGATA.................................................................................................................................................................................................................................................................................2311.0011000
........................................................................................................................TGCACGACGAGACAGTTG....................................................................................................................................................................................................................................................................................1811.0011000
...............................................................................................................................................................................................................................................................................................AT-TTAGTACTCAGCTGTCTCTC........................................................................................................2211.0011000
droYak3
TGT---ATCTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCCCC--A--------------GCA---------AAACAATC----AAAA-----------TACACCCCCACA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................CGTC-AGTGAGATCTCGGG...........................................................................................................................................................................................................................................................................................................1825.5011000000000011
........CTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------C.............................................................................................................................................................................................................................................................................................................................2612.00200000020000
.......................................................................AAG----------------------CGTC-AGTGAGATCTCG.............................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2211.00100100000000
.......................................................................................................TGAGATCTCGGGTTTGTTGCAC.................................................................................................................................................................................................................................................................................................2211.00100100000000
..................................................................GT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTT........................................................................................................................................................................................................................................................................................................2711.00100000010000
.........................................................................G----------------------CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2111.00100100000000
.......................................................................AAG----------------------CGTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................2311.00100010000000
....................................................................................................................TTGTTGCACGACGAGACAGT......................................................................................................................................................................................................................................................................................2011.00100000010000
......ATCTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------..............................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEre2
TCTTGTATCTATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-AGTGAGATCTCGGGTTTGTTGCACGACGAGACAGTTGCTAAACCGCC-CC--------------GCA---------AAACAATT----AAAA-------A--ATACACCC-CGCA-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCTCGTTGTTTTCGATTTCGGGATCTTGACAACGACGC--CATCGA--AT-----TGAAGACATTG--------------------------------A-----C-CCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..............................................................................................................................................................................................................CACCC-CGCA-AC-----------------------------------------------------------------CCCAT-TTAG........................................................................................................................2011.0010100000
.......................................................................................................................................................................................................................A-AC-----------------------------------------------------------------CCCAT-TTAGTACTCAGCTGTCTCT.........................................................................................................2711.0011000000
..........ATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------C.............................................................................................................................................................................................................................................................................................................................2411.0010001000
....................................................................................................................TTGTTGCACGACGAGACAGTTGCT..................................................................................................................................................................................................................................................................................2411.0010000010
.....................................................................................................................TGTTGCACGACGAGACAGTTGC...................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................TGTTGCACGACGAGACAGTTGCT..................................................................................................................................................................................................................................................................................2311.0010001000
.......................................................................AAG----------------------CGTC-AGTGAGATCTCGGG...........................................................................................................................................................................................................................................................................................................2111.0010000100
.................................................................................................GTC-AGTGAGATCTCGGGTT.........................................................................................................................................................................................................................................................................................................1911.0010100000
..........ATAAAGTG----------TC-------------------CAGA----------GTTGT-C-AAG----------------------CGTC-.........................................................................................................................................................................................................................................................................................................................2711.0010000010

Generated: 10/20/2015 at 04:24 PM