ID:

dmo_1278

 Coordinate:

scaffold_6498:333119-333269 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -11.4 -11.3

Flybase annnotation

exon [dmoj_GLEANR_14116:14]; CDS [Dmoj\GI14068-cds]; intron [Dmoj\GI14068-in]

No Repeatable elements found

mature
  1. scaffold_821:882-905 -
  2. scaffold_835:933-956 -
  3. scaffold_1858:1797-1820 +
  4. scaffold_2892:2913-2936 -
  5. scaffold_2912:49-72 -
  6. scaffold_3040:1129-1152 -
  7. scaffold_3517:2830-2853 +
  8. scaffold_4509:2935-2958 -
  9. scaffold_4728:4963-4986 +
  10. scaffold_4869:2332-2355 -
  11. scaffold_6457:44959-44982 +
  12. dmo_1278  scaffold_6498:333238-333261 -
  13. scaffold_6649:48777-48800 +
  14. scaffold_6652:2377-2400 -
star
  1. scaffold_821:849-873 -
  2. scaffold_835:900-924 -
  3. scaffold_1858:1829-1853 +
  4. scaffold_2892:2880-2904 -
  5. scaffold_2912:16-40 -
  6. scaffold_3040:1096-1120 -
  7. scaffold_3517:2862-2886 +
  8. scaffold_4509:2902-2926 -
  9. scaffold_4728:4995-5019 +
  10. scaffold_4869:2299-2323 -
  11. scaffold_6457:44991-45015 +
  12. dmo_1278  scaffold_6498:333205-333229 -
  13. scaffold_6649:48809-48833 +
  14. scaffold_6652:2344-2368 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#######################################-----------
TATATGCAGTTAGTGGCTCTTCAGGGATTTTCGATAAATTTATCGAAGGCGATTGTCGTCCATCCAGATTTTTGCCAGGACTGGCGAGTGTCTCGTTTTGAAGCTGATGTATTGGTGTTATCCCAAGGTGGCAGGTAAGTATTTACATATACGTTATATGTATTTTTTACATTGTTTATTAATTTCTTCGTTTTATTTCAGTTCGTCTGCGTTCTACTGGCGTCCATTGTGGTTAATTAGTCAATTGTCAA
**********************************************************.......((((.(((((((....))))))).))))......................**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body
..........................................................TCCATCCAGATTTTTGCCAGGACT......................................................................................................................................................................... 24 0 14 4.57 64 45 18 1 0
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 25 0 14 1.71 24 24 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGG....................................................................................................................................................................... 26 0 14 1.43 20 19 1 0 0
..........................................................TCCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 23 0 14 1.21 17 14 3 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTG........................................................................................................................................................................ 25 0 14 1.14 16 15 0 1 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCG........................................ 28 0 14 0.86 12 12 0 0 0
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGTG...................................................................................................................................... 27 0 14 0.86 12 12 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTC............................................ 24 0 14 0.86 12 12 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGA.................................................................................................................................................................... 29 0 14 0.86 12 12 0 0 0
.................TCTTCAGGGATTTTCGATAAATTT.................................................................................................................................................................................................................. 24 0 16 0.81 13 12 0 1 0
..........................................................................................TCTCGTTTTGAAGCTGATGTATTG......................................................................................................................................... 24 0 14 0.50 7 6 0 1 0
...................................................................................................................................CAGGTAAGTATTTACATATACGTTA............................................................................................... 25 0 13 0.38 5 5 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGC......................................... 27 0 14 0.36 5 4 1 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGC......................................... 26 0 14 0.36 5 5 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCT........................................... 25 0 14 0.36 5 4 1 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGC...................................................................................................................................................................... 27 0 14 0.36 5 5 0 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGCG........................................ 27 0 14 0.36 5 5 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGA........................................................................................................................................................................... 22 0 14 0.36 5 5 0 0 0
...........................................................CCATCCAGATTTTTGCCAGGACTGG....................................................................................................................................................................... 25 0 14 0.36 5 5 0 0 0
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCGTC............................................ 25 0 14 0.29 4 2 2 0 0
.................TCTTCAGGGATTTTCGATAAATT................................................................................................................................................................................................................... 23 0 16 0.25 4 4 0 0 0
.................TCTTCAGGGATTTTCGATAAATTTAT................................................................................................................................................................................................................ 26 0 16 0.25 4 4 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACC......................................................................................................................................................................... 24 1 14 0.21 3 0 3 0 0
....................................................TTGTCGTCCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 29 0 14 0.21 3 3 0 0 0
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGTGT..................................................................................................................................... 28 0 14 0.21 3 3 0 0 0
...........................................................................................CTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 24 0 15 0.20 3 3 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAAT.............. 23 0 15 0.20 3 3 0 0 0
...........................................................................................CTCGTTTTGAAGCTGATGTATTGGTG...................................................................................................................................... 26 0 15 0.20 3 3 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATC............. 24 1 15 0.20 3 2 1 0 0
.................TCTTCAGGGATTTTCGATAAATTTATCG.............................................................................................................................................................................................................. 28 0 16 0.19 3 3 0 0 0
.................TCTTCAGGGATTTTCGATAAATTTATC............................................................................................................................................................................................................... 27 0 16 0.19 3 3 0 0 0
..........................................................TGCATCCAGATTTTTGCCAGGACT......................................................................................................................................................................... 24 1 14 0.14 2 0 2 0 0
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTG......................................................................................................................................... 25 0 14 0.14 2 2 0 0 0
...................................................................................................................................................................................................TGGCAGTTCGTCTGCGTTCTACTGGCG............................. 27 2 14 0.14 2 2 0 0 0
...........................................CGAAGGCGATTGTCGTCCATCCAGATT..................................................................................................................................................................................... 27 0 14 0.14 2 2 0 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCT........................................... 24 0 14 0.14 2 2 0 0 0
...........................................................................................................................................................................................TCGTTTTATTTCAGTTCGTCTGCGTT...................................... 26 0 14 0.14 2 2 0 0 0
.........................................................CTCCATCCAGATTTTTGCCAGGACT......................................................................................................................................................................... 25 1 14 0.14 2 0 2 0 0
..........................................................TCCATCCAGATCTTTGCCAGGACTGG....................................................................................................................................................................... 26 1 14 0.14 2 2 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCGT....................................... 29 0 14 0.14 2 2 0 0 0
...................................................................................................................................CAGGTAAGTATTTACATATACGT................................................................................................. 23 0 14 0.14 2 2 0 0 0
.....................................................TGTCGTCCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 28 0 14 0.14 2 2 0 0 0
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCGTCTGC......................................... 28 0 14 0.14 2 1 1 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAA............... 22 0 15 0.13 2 1 1 0 0
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGTGG................... 25 0 15 0.13 2 2 0 0 0
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGGTTAA............... 25 0 15 0.13 2 2 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATT............. 24 0 15 0.13 2 2 0 0 0
..................CTTCAGGGATTTTCGATAAATTT.................................................................................................................................................................................................................. 23 0 16 0.13 2 2 0 0 0
................CTCTTCAGGGATTTTCGATAAATTT.................................................................................................................................................................................................................. 25 0 16 0.13 2 2 0 0 0
.......................................................................................................................................TAAGTATTTACATATACGTTATATGT.......................................................................................... 26 0 12 0.08 1 1 0 0 0
............................................................................................................................................................TATGTATTTTTTACATTGTTTATTA...................................................................... 25 0 12 0.08 1 1 0 0 0
...................................................................................................................................CAGGTAAGTATTTACATATACGTTAT.............................................................................................. 26 0 13 0.08 1 1 0 0 0
......................................................................................................GCTGATGTATTGGTGTTATCCCAAGGTGG........................................................................................................................ 29 0 13 0.08 1 1 0 0 0
..................................................................................................................................CCAGGTAAGTATTTACATATACGTTA............................................................................................... 26 1 13 0.08 1 1 0 0 0
...........................................................CCATCCAGATTTTTGCCAGGACTGGC...................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGATT......................................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0
..........................................................TCAATCCAGATTTTTGCCAGGACT......................................................................................................................................................................... 24 1 14 0.07 1 0 1 0 0
.....................................................TGTCGTCCATCCAGATTTTTGCCAGG............................................................................................................................................................................ 26 0 14 0.07 1 1 0 0 0
..........................................................................................TCTTGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 25 1 14 0.07 1 1 0 0 0
..........................................................ACCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 23 1 14 0.07 1 0 1 0 0
.........................................................GTCCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0
......................................................................TTTGCCAGGACTGGCGAGTGTCTCGTT.......................................................................................................................................................... 27 0 14 0.07 1 1 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCC........................................ 28 1 14 0.07 1 1 0 0 0
................................................................CAGATTTTTGCCAGGACTGGCGAGT.................................................................................................................................................................. 25 0 14 0.07 1 1 0 0 0
.......................................................TCGTCCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
................................................................CAGATTTTTGCCAGGACTGGCGAG................................................................................................................................................................... 24 0 14 0.07 1 0 1 0 0
..........................................................TCCATCCAGATTTTTGCCAGC............................................................................................................................................................................ 21 1 14 0.07 1 1 0 0 0
.........................................................................................................................................................................................CTTCGTTTTATTTCAGTTCGTCTGC......................................... 25 0 14 0.07 1 1 0 0 0
...........................................................CCATCCAGATTTTTGCCAGGACT......................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0
..........................................................TCCACCCAGATTTTTGCCAGGACTG........................................................................................................................................................................ 25 1 14 0.07 1 1 0 0 0
....................................................................................................................GTTATCCCAAGGTGGCAGGTAAG................................................................................................................ 23 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTTT....................................................................................................................................................................... 26 2 14 0.07 1 1 0 0 0
....................................................................................................................................................................................................TTCAGTTCGTCTGCGTTCTACTGGC.............................. 25 0 14 0.07 1 1 0 0 0
.................................................................................................................................................................................................TATTTCAGTTCGTCTGCGTTCTAC.................................. 24 0 14 0.07 1 1 0 0 0
............................................................CATCCAGATTTTTGCCAGGACTGG....................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCC........................................... 25 1 14 0.07 1 0 1 0 0
.....................................................................................................................................................................TTTACATTGTTTATTAATTTCTTCGTT........................................................... 27 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGTT.......................................................................................................................................................................... 23 2 14 0.07 1 0 1 0 0
............................................................................AGGACTGGCGAGTGTCTCGTTTTGAA..................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
........................................................................................TGTCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 27 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATCTTTGCCAGGACT......................................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTC............................................ 23 0 14 0.07 1 1 0 0 0
.......................................................................................................................................................................................TGCTTCGTTTTATTTCAGTTCGTCT........................................... 25 1 14 0.07 1 0 1 0 0
..........................................................................................TCTCGTTTTGAAGCTGATGTA............................................................................................................................................ 21 0 14 0.07 1 1 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGT............................................. 23 0 14 0.07 1 1 0 0 0
........................................................................................................................TCCCAAGGTGGCAGGTAAGTATC............................................................................................................ 23 1 14 0.07 1 1 0 0 0
.........................................................................................................................................................................................CTTCGTTTTATTTCAGTTCGTCT........................................... 23 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCG..................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGC.................................................................................................................................................................... 29 1 14 0.07 1 1 0 0 0
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGT....................................................................................................................................... 26 0 14 0.07 1 0 0 0 1
.................................................................................TGGCGAGTGTCTCGTTTTGAAGCTGA................................................................................................................................................ 26 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGG............................................................................................................................................................................ 21 0 14 0.07 1 1 0 0 0
..................................................................GATTTTTGCCAGGACTGGCGA.................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0
.....................................................TGTCGTCCATCCAGATTTTTCCCCC............................................................................................................................................................................. 25 3 14 0.07 1 1 0 0 0
......................................................................................................................................GTAAGTATTTACATATACGT................................................................................................. 20 0 14 0.07 1 1 0 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTG.......................................... 25 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGAC...................................................................................................................................................................... 27 1 14 0.07 1 0 1 0 0
....................................................................................................................................................................................................TTCAGTTCGTCTGCGTTCTACTGGCG............................. 26 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGTC..................................................................................................................................................................... 28 2 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCATGACT......................................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0
...........................................................CCATCCAGATTTTTGCCAGGACTGGCGA.................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0
..........................................................TGCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 23 1 14 0.07 1 0 1 0 0
....................................................................................................................GTTATCCCAAGGTGGCAG..................................................................................................................... 18 0 14 0.07 1 1 0 0 0
.....................................................TGTCGTCCATCCAGATTTTTGCCAGGA........................................................................................................................................................................... 27 0 14 0.07 1 1 0 0 0
....................................................TTGTCGTCCATCCAGATTTTTGCC............................................................................................................................................................................... 24 0 14 0.07 1 0 1 0 0
...........................................................CCATCCAGATTTTTGCCAGGAC.......................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGCGTT...................................... 29 0 14 0.07 1 0 0 0 1
........................................................................................TGTCTCGTTTTGAAGCTGATGTAT........................................................................................................................................... 24 0 14 0.07 1 1 0 0 0
........................................................................................TGTCTCGTTTTGAAGCTGATGTATTG......................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
...................................................................................................................TGTTATCCCAAGGTGGCAG..................................................................................................................... 19 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATGTTTGCCAGGACTGGCG..................................................................................................................................................................... 28 1 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATGTTTGCCAGGACTGGC...................................................................................................................................................................... 27 1 14 0.07 1 1 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCTGTTCGTCTGCG........................................ 28 1 14 0.07 1 1 0 0 0
..........................................................................................TCTTGTTTTGAAGCTGATGTATTG......................................................................................................................................... 24 1 14 0.07 1 1 0 0 0
....................................................TTGTCGTCCATCCAGATTTTTGCCAG............................................................................................................................................................................. 26 0 14 0.07 1 1 0 0 0
...........................................................CCATCCAGATTTTTGCCAGGACTGGCG..................................................................................................................................................................... 27 0 14 0.07 1 1 0 0 0
....................................................TTGTCGTCCATCCAGATTTTTGCCAGGA........................................................................................................................................................................... 28 0 14 0.07 1 0 0 0 1
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTGGT....................................................................................................................................... 27 0 14 0.07 1 1 0 0 0
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 26 0 14 0.07 1 1 0 0 0
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGT.................................................................................................................................................................... 29 1 14 0.07 1 1 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGG................... 18 0 15 0.07 1 1 0 0 0
.................................................................................................................................................................................................................................ATTGTGGTTAATTAGTCAATT..... 21 0 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATTAG........... 26 0 15 0.07 1 1 0 0 0
...............................................................................................TTTTGAAGCTGATGTATTGGTGTT.................................................................................................................................... 24 0 15 0.07 1 1 0 0 0
..................................................................................................TGAAGCTGATGTATTGGTGTTA................................................................................................................................... 22 0 15 0.07 1 1 0 0 0
..........................................................................................................................................................................................................TCGTCTGCGTTCTACTGGCGTCCATTG...................... 27 0 15 0.07 1 1 0 0 0
.......................................................................................................CTGATGTATTGGTGTTATCCCAAGG........................................................................................................................... 25 0 15 0.07 1 1 0 0 0
...............................................................................................TTTTGAAGCTGATGTATTGGTGTTATCCC............................................................................................................................... 29 0 15 0.07 1 1 0 0 0
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCG.............................................. 23 0 15 0.07 1 1 0 0 0
...........................................................................................CTCGTTTTGAAGCTGATGTATTG......................................................................................................................................... 23 0 15 0.07 1 1 0 0 0
......................................................................................................GCTGATGTATTGGTGTTATCCCAAGG........................................................................................................................... 26 0 15 0.07 1 1 0 0 0
........................................................................................................................................................................................................................CTGGCGTCCATTGTGGTTAAT.............. 21 0 15 0.07 1 1 0 0 0
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCGTCCA......................... 25 0 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATTA............ 25 0 15 0.07 1 0 1 0 0
............................................................................................TCGTTTTGAAGCTGATGTATTGG........................................................................................................................................ 23 0 15 0.07 1 1 0 0 0
..................................................................................................TGAAGCTGATGTATTGGTGTTATC................................................................................................................................. 24 0 15 0.07 1 1 0 0 0
...............................................................................................................................................................................................TTTATTTCAGTTCGTCTC.......................................... 18 1 15 0.07 1 1 0 0 0
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCG............................. 21 0 15 0.07 1 1 0 0 0
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCGTCCATTG...................... 28 0 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTT................. 20 0 15 0.07 1 1 0 0 0
...................................................................................................................................................................................TAATTTCTTCGTTTTATTTCAGTTCG.............................................. 26 0 15 0.07 1 1 0 0 0
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGG................... 21 0 15 0.07 1 1 0 0 0
...............................................................................................TTTTGAAGCTGATGTATTGG........................................................................................................................................ 20 0 15 0.07 1 1 0 0 0
....................................................................................................................................................................................................................TCTACTGGCGTCCATTGTGGTC................. 22 1 15 0.07 1 1 0 0 0
............................TTTCGATAAATTTATCGAAGGCGATTG.................................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................................CGTCCATTGTGGTTAATC............. 18 1 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAAAAAA........... 26 3 15 0.07 1 1 0 0 0
...................................................................................................GAAGCTGATGTATTGGTGTTATCCC............................................................................................................................... 25 0 15 0.07 1 0 1 0 0
.....................................................................................................AGCTGATGTATTGGTGTTATCCCAAGA........................................................................................................................... 27 1 15 0.07 1 1 0 0 0
..................................................................................................TGAAGCTGATGTATTGGTGTTATCCC............................................................................................................................... 26 0 15 0.07 1 1 0 0 0
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGGTTA................ 24 0 15 0.07 1 1 0 0 0
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGTGGTTC................ 28 1 15 0.07 1 1 0 0 0
................................................................................................TTTGAAGCTGATGTATTGGTGTTATC................................................................................................................................. 26 0 15 0.07 1 1 0 0 0
......................................................................................................GCTGATGTATTGGTGTTATCCC............................................................................................................................... 22 0 15 0.07 1 0 1 0 0
............................................................................................TCGTTTTGAAGCTGATGTATTGGTG...................................................................................................................................... 25 0 15 0.07 1 1 0 0 0
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGT..................... 23 0 15 0.07 1 1 0 0 0
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGGTTATATA............ 28 2 15 0.07 1 1 0 0 0
.......................................................................................................................................................................................................................ACTGGCGTCCATTGTGGTTAATC............. 23 1 15 0.07 1 1 0 0 0
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCG.............................................. 22 0 15 0.07 1 1 0 0 0
..............................................................................................GTTTTGAAGCTGATGTATTGGTGT..................................................................................................................................... 24 0 15 0.07 1 0 1 0 0
.......................................................................................GGGTCTCGTTTTGAAGCTGATGTATTG......................................................................................................................................... 27 1 15 0.07 1 1 0 0 0
................TTCTTCAGGGATTTTCGATAAATTT.................................................................................................................................................................................................................. 25 1 16 0.06 1 1 0 0 0
..TATGCAGTTAGTGGCTCTTCAGGG................................................................................................................................................................................................................................. 24 0 16 0.06 1 1 0 0 0
..................CTTCAGGGATTTTCGATAAATTTATCG.............................................................................................................................................................................................................. 27 0 16 0.06 1 1 0 0 0
.................TCTTCAGGGATTTTCGATAAATTTA................................................................................................................................................................................................................. 25 0 16 0.06 1 1 0 0 0
.................TCTTCAGGGATTTTCGATAAA..................................................................................................................................................................................................................... 21 0 17 0.06 1 1 0 0 0
.................TCTTCAGGGATTTTCGATAAATTTT................................................................................................................................................................................................................. 25 1 17 0.06 1 1 0 0 0
...ATGCAGTTAGTGGCTCTTCAG................................................................................................................................................................................................................................... 21 0 17 0.06 1 0 0 0 1
.........................................................................................................................................................................................................TTCGTCTGCGATCTCCTGAC.............................. 20 3 20 0.05 1 0 1 0 0
.......................................................................................ATGTCTCGTGTTGAAGCA.................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

ATATACGTCAATCACCGAGAAGTCCCTAAAAGCTATTTAAATAGCTTCCGCTAACAGCAGGTAGGTCTAAAAACGGTCCTGACCGCTCACAGAGCAAAACTTCGACTACATAACCACAATAGGGTTCCACCGTCCATTCATAAATGTATATGCAATATACATAAAAAATGTAACAAATAATTAAAGAAGCAAAATAAAGTCAAGCAGACGCAAGATGACCGCAGGTAACACCAATTAATCAGTTAACAGTT
****************************************************************************************************************************************.......((((.(((((((....))))))).))))......................********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
.................................................................................................................CCACAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 28 0 14 1.36 19 13 6 0 0 0
....ACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 23 0 16 1.25 20 19 0 1 0 0
....................................................................................................................CAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 25 0 14 1.14 16 11 5 0 0 0
.............................................TTCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 23 0 14 0.93 13 12 1 0 0 0
.TATACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 26 0 16 0.88 14 13 0 1 0 0
...........................................................................................................................................................................................................................CGCAGGTAACACCAATTAATCAGTTAAC.... 28 0 15 0.87 13 11 2 0 0 0
.............................................................................................................................................................................................................................CAGGTAACACCAATTAATCAGTTAAC.... 26 0 15 0.87 13 11 2 0 0 0
..............................................TCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 22 0 14 0.86 12 7 5 0 0 0
...............................................................................................................................................................................................................................GGTAACACCAATTAATCAGTTAAC.... 24 0 15 0.73 11 11 0 0 0 0
............................................................................................................................................................................................................................GCAGGTAACACCAATTAATCAGTTAAC.... 27 0 15 0.60 9 8 1 0 0 0
............................................CTTCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 24 0 14 0.57 8 6 0 0 2 0
.....CGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 22 0 16 0.56 9 6 2 1 0 0
..ATACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 25 0 16 0.50 8 6 2 0 0 0
.............................................................................CCTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 23 0 14 0.50 7 5 2 0 0 0
......................................................................................TCACAGAGCAAAACTTCGACTACAT............................................................................................................................................ 25 0 14 0.43 6 4 2 0 0 0
.......................................................................................................................TAGGGTTCCACCGTCCATTCAT.............................................................................................................. 22 0 14 0.43 6 5 0 1 0 0
.............................................................................CCTGACCGCTCACAGAGCAAAACTT..................................................................................................................................................... 25 0 14 0.36 5 4 1 0 0 0
..........................................................................................................................................................................................................................CCGCAGGTAACACCAATTAATCAGTTAAC.... 29 0 15 0.33 5 4 1 0 0 0
...TACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 24 0 16 0.31 5 5 0 0 0 0
..................................................................................................................CACAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 27 0 14 0.29 4 3 1 0 0 0
...........................................................................GTCCTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 25 0 14 0.29 4 4 0 0 0 0
...................................................................................................................ACAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 26 0 14 0.29 4 4 0 0 0 0
...........................................................................................................................................................................................................................CGCAGGTAACACCAATTAATCAGT........ 24 0 15 0.27 4 4 0 0 0 0
........................................................................................................................................................................................................CAAGCAGACGCAAGATGACCGCAGGTA........................ 27 0 14 0.21 3 1 2 0 0 0
...........................................GCTTCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 25 0 14 0.21 3 3 0 0 0 0
........................................................................................................................AGGGTTCCACCGTCCATTCAT.............................................................................................................. 21 0 14 0.21 3 3 0 0 0 0
......................................................................................................................ATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 23 0 14 0.21 3 3 0 0 0 0
..................................................................................CCGCTCACAGAGCAAAACTTCGA.................................................................................................................................................. 23 0 14 0.21 3 1 2 0 0 0
................................................CGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 20 0 14 0.21 3 2 0 1 0 0
..........................................................................................................................................................................................................................CCGCAGGTAACACCAATTAATCAGTTAA..... 28 0 15 0.20 3 3 0 0 0 0
................................................................................................................................................................................................................CGCAAGATGACCGCAGGTAACACCAATT............... 28 0 15 0.20 3 2 0 1 0 0
........................................................................................................................................................................................................................GACCGCAGGTAACACCAATTAATCAGT........ 27 0 15 0.20 3 3 0 0 0 0
...........................................................................................................................................................................................................................CGCAGGTAACACCAATTAATCAGTTAA..... 27 0 15 0.20 3 3 0 0 0 0
ATATACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 27 0 16 0.19 3 2 0 1 0 0
...TACGTCAATCACCGAGAAGTCCC................................................................................................................................................................................................................................. 23 0 16 0.19 3 3 0 0 0 0
....................................................................................................................CAATAGGGTTCCACCGTCCATTCATAA............................................................................................................ 27 0 14 0.14 2 2 0 0 0 0
.......................................................................AACGGTCCTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 29 0 14 0.14 2 2 0 0 0 0
..............................................TCCGCTAACAGCAGGTAGGTC........................................................................................................................................................................................ 21 0 14 0.14 2 2 0 0 0 0
...............................................CCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 21 0 14 0.14 2 1 1 0 0 0
................................................................................................................ACCACAATAGGGTTCCACCGTCCATT................................................................................................................. 26 0 14 0.14 2 1 1 0 0 0
................................................................................................................ACCACAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 29 0 14 0.14 2 2 0 0 0 0
....................................................................................GCTCACAGAGCAAAACTTCGACTACAT............................................................................................................................................ 27 0 14 0.14 2 2 0 0 0 0
..............................................................................CTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 22 0 14 0.14 2 0 2 0 0 0
.......................................................................................................................TAGGGTTCCACCGTCCATTCATAAA........................................................................................................... 25 0 14 0.14 2 1 1 0 0 0
................................................................................GACCGCTCACAGAGCAAAACTTCGA.................................................................................................................................................. 25 0 14 0.14 2 2 0 0 0 0
........................................................................................................................................................................................................CAAGCAGACGCAAGATGACCGCAG........................... 24 0 14 0.14 2 2 0 0 0 0
.....................................................................................CTCACAGAGCAAAACTTCGACTACAT............................................................................................................................................ 26 0 14 0.14 2 2 0 0 0 0
............................................................................TCCTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 24 0 14 0.14 2 1 1 0 0 0
.............................................................................................................................................................................................................................CAGGTAACACCAATTAATCAGTTAA..... 25 0 15 0.13 2 2 0 0 0 0
..........................................................................................................................................................................................................................CCGCAGGTAACACCAATTAATCAGT........ 25 0 15 0.13 2 2 0 0 0 0
....ACGTCAATCACCGAGAAGTCCC................................................................................................................................................................................................................................. 22 0 16 0.13 2 2 0 0 0 0
.......................................................AGAAGGTAGGTCTGAAAAAG................................................................................................................................................................................ 20 3 20 0.10 2 0 0 2 0 0
..................................................................................................................................CGTCCATTCATAAATGTATATGCAATAT............................................................................................. 28 0 13 0.08 1 1 0 0 0 0
...................................................................................................................................GTCCATTCATAAATGTATATGCAAT............................................................................................... 25 0 13 0.08 1 0 1 0 0 0
..............................................................................................................................CCACCGTCCATTCATAAATGTATATGCA................................................................................................. 28 0 13 0.08 1 1 0 0 0 0
....................................................AACAGCAGGTAGGTCTAAAAACGGT.............................................................................................................................................................................. 25 0 14 0.07 1 1 0 0 0 0
............................................................................................................CATAACCACAATAGGGTTCCACCGTCCAT.................................................................................................................. 29 0 14 0.07 1 1 0 0 0 0
...........................................................................GTCCTGACCGCTCACAGAGCAAA......................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0
........................................................................................................................................................................TGTAACAAATAATTAAAGAAGCAAAATA....................................................... 28 0 14 0.07 1 1 0 0 0 0
....................................................................................................................CAATAGGGTTCCACAGTCCATTCAT.............................................................................................................. 25 1 14 0.07 1 0 1 0 0 0
..................................................................................................................CACAATAGGGTTCCACCGTCCAGT................................................................................................................. 24 1 14 0.07 1 0 1 0 0 0
.........................................................................................................................GGGTTCCACCGTCCATTCATAAATGTAT...................................................................................................... 28 0 14 0.07 1 1 0 0 0 0
........................................................................ACGGTCCTGACCGCTCACAGAGCAA.......................................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0
..........................................................................GGTCCTGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
.............................................................................................................................TCCACCGTCCATTCATAAAT.......................................................................................................... 20 0 14 0.07 1 0 1 0 0 0
................................................CGCTAACAGCAGGTAGGTCTAAA.................................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0
..........................................................................GGTCCTGACCGCTCACAGAGCAAA......................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0
................................................................................................................ACCACAATAGGGTTCCACCGTCCATTCA............................................................................................................... 28 0 14 0.07 1 1 0 0 0 0
...............................................................................................................AACCACAATAGGGTTCCACCGTCCAT.................................................................................................................. 26 0 14 0.07 1 1 0 0 0 0
..........................................AGCTTCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
............................................CTTCCGCTAACAGGAGGTAGGTCT....................................................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0 0
...................................................................................CGCTCACAGAGCAAAACTTCGACTA............................................................................................................................................... 25 0 14 0.07 1 0 1 0 0 0
..............................................TCCGCTAACAGCAGGTAGGTCC....................................................................................................................................................................................... 22 1 14 0.07 1 0 1 0 0 0
...................................................................................CGCTCACAGAGCAAAACTTCGACTACAT............................................................................................................................................ 28 0 14 0.07 1 1 0 0 0 0
..............................................................................................................................CCACCGTCCATTCATAAATGTA....................................................................................................... 22 0 14 0.07 1 1 0 0 0 0
...................................................................................................................TCAATAGGGTTCCACCGTCCATTCAT.............................................................................................................. 26 1 14 0.07 1 1 0 0 0 0
...............................................................................TGACCGCTCACAGAGCAAAACTTCGA.................................................................................................................................................. 26 0 14 0.07 1 1 0 0 0 0
............................................................................................................................................................................................GCAAAATAAAGTCAAGCAGACGCAAGAT................................... 28 0 14 0.07 1 1 0 0 0 0
........................................................................................................................................................................TGTAACAAATAATTAAAGAAGCAAAA......................................................... 26 0 14 0.07 1 1 0 0 0 0
..............................................CCCGCTAACAGCAGGTAGGTCTAAA.................................................................................................................................................................................... 25 1 14 0.07 1 0 1 0 0 0
......................................................................................................................................................................AATGTAACAAATAATTAAAGAAGCAAA.......................................................... 27 0 14 0.07 1 1 0 0 0 0
...................................................................................CGCTCACAGAGCAAAACTTCGACGA............................................................................................................................................... 25 1 14 0.07 1 0 1 0 0 0
.....................................................................CTTACGGTCCTGACCGCTCACAGAGCAA.......................................................................................................................................................... 28 3 14 0.07 1 0 1 0 0 0
...........................................................................................................................GTTCCACCGTCCATTCATAAATGTAT...................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
..............................................................................CTGACCGCTCACAGAGCAAAACTTCGACT................................................................................................................................................ 29 0 14 0.07 1 1 0 0 0 0
..................................................................................................................CACAATAGGGTTCCACCGTC..................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0
......................................................................AAACGGTCCTGACCGCTCACAGAGC............................................................................................................................................................ 25 0 14 0.07 1 1 0 0 0 0
.....................................................................................................................................................................................................AGTCAAGCAGACGCAAGATGACCGC............................. 25 0 14 0.07 1 1 0 0 0 0
...............................................................................CGACCGCTCACAGAGCAAAAC....................................................................................................................................................... 21 1 14 0.07 1 0 1 0 0 0
.........................................................................................CAGAGCAAAACTTCGACTACATAAC......................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0
..........................................AGCTTCCGCTAACAGCAGGTATGTCT....................................................................................................................................................................................... 26 1 14 0.07 1 1 0 0 0 0
......................................................................CTACGGTCCTGACCGCTCACAGAGCAAA......................................................................................................................................................... 28 2 14 0.07 1 1 0 0 0 0
....................................................................................................................CAATAGGGTTCCACCGTCCATTC................................................................................................................ 23 0 14 0.07 1 0 1 0 0 0
........................................................GCAGGTAGGTCTAAAAACGGTCCT........................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0
...................................................................................................................................................................................................AAAGTCAAGCAGACGCAAGATGACCG.............................. 26 0 14 0.07 1 1 0 0 0 0
......................................................................................................................................................................................................GTCAAGCAGACGCAAGATGACCG.............................. 23 0 14 0.07 1 1 0 0 0 0
....................................................AACAGCAGGTAGGTCTAAAAACGGTCCT........................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0 0
...................................................TAACAGCAGGTAGGTCTAAAAACGGT.............................................................................................................................................................................. 26 0 14 0.07 1 1 0 0 0 0
.............................................................................CCTGACCGCTCACAGAACCAAACTTCGAC................................................................................................................................................. 29 2 14 0.07 1 0 1 0 0 0
.....................................................................................................................................................................AAATGTAACAAATAATTAAAGAAGCAAA.......................................................... 28 0 14 0.07 1 1 0 0 0 0
.......................................................................................................................TAGGGTTCCACCGTCCATTCATAAATGT........................................................................................................ 28 0 14 0.07 1 1 0 0 0 0
.........................................................................................................................GGGTTCCACCGTCCATTCATAAA........................................................................................................... 23 0 14 0.07 1 1 0 0 0 0
....................................................................................GCTCACAGAACAAAACTTCGACTACAT............................................................................................................................................ 27 1 14 0.07 1 1 0 0 0 0
..............................................TCCGCTAACAGCAGGTAGGTCTAAAA................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
..................................................CTAACAGCAGGTAGGTCTAAAAACG................................................................................................................................................................................ 25 0 14 0.07 1 0 1 0 0 0
....................................................................................................................CAATAGGGTTCCACCGTCCATTAAT.............................................................................................................. 25 1 14 0.07 1 0 1 0 0 0
.................................................................................................................CCACAATAGGGTTCCACCGTCCATTCA............................................................................................................... 27 0 14 0.07 1 0 1 0 0 0
......................................................................................................................ATAGGGCTCCACCGTCCATTCATA............................................................................................................. 24 1 14 0.07 1 1 0 0 0 0
........................................................................................................................................................................................................CAAGCAGACGCAAGATGACCG.............................. 21 0 14 0.07 1 1 0 0 0 0
..................................................................................ACGCTCACAGAGCAAAACTTCGACT................................................................................................................................................ 25 1 14 0.07 1 1 0 0 0 0
................................................................................GACCGCTCACAGAGCAAAACTTCGACTA............................................................................................................................................... 28 0 14 0.07 1 1 0 0 0 0
................................................CGCTAACAGCAGGTAGGTCTAAAAA.................................................................................................................................................................................. 25 0 14 0.07 1 1 0 0 0 0
.................................................................................................................................................................................................ATAAAGTCAAGCAGACGCAAGAT................................... 23 0 14 0.07 1 1 0 0 0 0
..............................................................................................................................CCACCGTCCATTCATAAATGTATAT.................................................................................................... 25 0 14 0.07 1 0 1 0 0 0
............................................................................TCCTGACCGCTCACAGAGCAAAA........................................................................................................................................................ 23 0 14 0.07 1 1 0 0 0 0
....................................................................................................................CAATAGGGTTCCACCGTCCATTCGT.............................................................................................................. 25 1 14 0.07 1 0 1 0 0 0
........................................................................................................................AGGGTTCCACCGTCCATTCATA............................................................................................................. 22 0 14 0.07 1 1 0 0 0 0
........................................................................................ACAGAGCAAAACTTCGACTACATAAC......................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
.....................................................................................................................................................................................................AGTCAAGCAGACGCAAGAT................................... 19 0 14 0.07 1 1 0 0 0 0
..............................................................................CTGACCGCTCACAGAGCAAAA........................................................................................................................................................ 21 0 14 0.07 1 1 0 0 0 0
............................................CTTCCGCTAACAGCAGGTAGGTC........................................................................................................................................................................................ 23 0 14 0.07 1 1 0 0 0 0
..............................................CCCGCTAACAGCAGGTAGGTCT....................................................................................................................................................................................... 22 1 14 0.07 1 0 1 0 0 0
...................................................................................CGCTCACAGAGCAAAACTTCGACT................................................................................................................................................ 24 0 14 0.07 1 1 0 0 0 0
.....................................................................AAAACGGTCCTGACCGCTCACAGAGC............................................................................................................................................................ 26 0 14 0.07 1 1 0 0 0 0
..................................................................................CCGCTCACAGAGCAAAACTTCCAC................................................................................................................................................. 24 1 14 0.07 1 0 1 0 0 0
........................................................................................................................AGGGTTCCACCGTCCATTCATAAA........................................................................................................... 24 0 14 0.07 1 1 0 0 0 0
.............................................................................CCCGACCGCTCACAGAGCAAAACTT..................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0
.........................................................................................................................GGGTTCCACCGTCCATTCATAAATGT........................................................................................................ 26 0 14 0.07 1 1 0 0 0 0
......................................................................................TCACAGAGCAAAACTTCGACTACATA........................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0
......................................................................................TCACAGAGCAAAACTTCGACTACAC............................................................................................................................................ 25 1 14 0.07 1 1 0 0 0 0
............................................................................CCCTGACCGCTCACAGAGCAAA......................................................................................................................................................... 22 1 14 0.07 1 0 1 0 0 0
..................................................................................................................CACAATAGGGTTCCACCGTCCATTCGT.............................................................................................................. 27 1 14 0.07 1 0 1 0 0 0
.......................................................................AACGGTCCTGACCGCTCGC................................................................................................................................................................. 19 1 15 0.07 1 1 0 0 0 0
...............................................................................................................................................................................................................ACGCAAGATGACCGCAGGTAA....................... 21 0 15 0.07 1 1 0 0 0 0
............................................................................................................................................................................................................................CCAGGTAACACCAATTAATCAGTTAA..... 26 1 15 0.07 1 1 0 0 0 0
..........................................................................................................................................................................................................AGCAGACGCAAGATGACCG.............................. 19 0 15 0.07 1 0 0 1 0 0
...............................................................................................................................................................................................................................GGTAACACCAATTAATCAGTT....... 21 0 15 0.07 1 1 0 0 0 0
...............................................................................................................................................................................................................ACGCAAGATGACCGCAGGTAACACCAA................. 27 0 15 0.07 1 1 0 0 0 0
............................................................................................................................................................................................................................ACAGGTAACACCAATTAATCAGTTAAC.... 27 1 15 0.07 1 1 0 0 0 0
........................................ATAGCTTCCGCTAACAGCAGGTAGGT......................................................................................................................................................................................... 26 0 15 0.07 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCGCAGGTAACACCAATTAATCAG......... 24 0 15 0.07 1 1 0 0 0 0
...........................................................................................................................................................................................................GCAGACGCAAGATGACCGCAGGT......................... 23 0 15 0.07 1 1 0 0 0 0
..................................................................................................................................................................................................................................AACACCAATTAATCAGTTAAC.... 21 0 15 0.07 1 0 1 0 0 0
..........................................................................GGTCCTGACCGCTCACAGAGCAAAACTTG.................................................................................................................................................... 29 1 15 0.07 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACCGCAGGTAACACCAATTAATCAG......... 25 0 15 0.07 1 1 0 0 0 0
............................................................................................................................................................................................................................GCAGGTAACACCAATTGATCAGTTAAC.... 27 1 15 0.07 1 1 0 0 0 0
...........................................................................................................................................................................................................GCAGACGCAAGATGACCGCAGGTAA....................... 25 0 15 0.07 1 1 0 0 0 0
.....................................................................................................................................................................................................................GATGACCGCAGGTAACACCAATTAAT............ 26 0 15 0.07 1 1 0 0 0 0
...............................................................................................................................................................................................................ACGCAAGATGACCGCAGGTAACACCAAT................ 28 0 15 0.07 1 1 0 0 0 0
............................................................................................................................................................................................................CAGACGCAAGATGACCGCAGG.......................... 21 0 15 0.07 1 1 0 0 0 0
...........................................................................................................................................................................................................................CGCAGGTAACACCAATTAATCAG......... 23 0 15 0.07 1 1 0 0 0 0
................................................................................................................................................................................................................................GTAACACCAATTAATCAGTTAAC.... 23 0 15 0.07 1 1 0 0 0 0
...................................................................................................................ACAATAGGGTTCCGCCGTCCATTCA............................................................................................................... 25 1 15 0.07 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACCGCAGGTAACACCAATTAATCAGT........ 26 0 15 0.07 1 1 0 0 0 0
............................................CTTCCGCTAACAGCAGGTAGGTCTTG..................................................................................................................................................................................... 26 2 15 0.07 1 1 0 0 0 0
........................................................................................................................................................................................................................GACCGCAGGTAACACCAATTAATCAGTTA...... 29 0 15 0.07 1 1 0 0 0 0
..............................................................................................................................................................................................................................AGGTAACACCAATTAATCAGTTAAC.... 25 0 15 0.07 1 1 0 0 0 0
...............CGAGAAGTCCCTAAAAGCTATTTAAA.................................................................................................................................................................................................................. 26 0 16 0.06 1 1 0 0 0 0
........CAATCACCGAGAAGTCCCTAAAAGCTAT....................................................................................................................................................................................................................... 28 0 16 0.06 1 0 1 0 0 0
............................................................................................................................................................................ACAAATAATTAAAGAAGCAAAA......................................................... 22 0 16 0.06 1 1 0 0 0 0
.....CGTCAATCACCGAGAAGTCCC................................................................................................................................................................................................................................. 21 0 16 0.06 1 1 0 0 0 0
AAATACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 27 1 16 0.06 1 0 1 0 0 0
.....................GTCCCTAAAAGCTATTTAAA.................................................................................................................................................................................................................. 20 0 16 0.06 1 1 0 0 0 0
.....CGTCAATCACCGAGAAGTCCCTAAA............................................................................................................................................................................................................................. 25 0 16 0.06 1 0 0 1 0 0
ATATACGTCAATCACCGAGAAGTCCCTC............................................................................................................................................................................................................................... 28 1 16 0.06 1 1 0 0 0 0
.................AGAAGTCCCTAAAAGCTATTTAAATA................................................................................................................................................................................................................ 26 0 16 0.06 1 1 0 0 0 0
......GTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 21 0 16 0.06 1 1 0 0 0 0
..CTACGTCAATCACCGAGAAGTCCCT................................................................................................................................................................................................................................ 25 1 16 0.06 1 1 0 0 0 0
........CAATCACCGAGAAGTCCCTAAAAGCTATT...................................................................................................................................................................................................................... 29 0 16 0.06 1 1 0 0 0 0
......GTCAATCACCGAGAAGTCACT................................................................................................................................................................................................................................ 21 1 16 0.06 1 0 1 0 0 0
..AGACGTCAATAACCGAGAAGTCCCT................................................................................................................................................................................................................................ 25 2 16 0.06 1 0 1 0 0 0
.......TCAATCACCGAGAAGTCGCTAAA............................................................................................................................................................................................................................. 23 1 16 0.06 1 0 1 0 0 0
....ACGTCAATCACCGAGAAGT.................................................................................................................................................................................................................................... 19 0 17 0.06 1 1 0 0 0 0
.........................................TAGCTTCCGCTAACAGCAGGTA............................................................................................................................................................................................ 22 0 17 0.06 1 1 0 0 0 0
...................................TTTAAATAGCTTCCGCTAACAGCAG............................................................................................................................................................................................... 25 0 17 0.06 1 1 0 0 0 0
...................................CTTAAATAGCTTCCGCTAACAGCAGGTA............................................................................................................................................................................................ 28 1 17 0.06 1 1 0 0 0 0
...........ACACCGAGAAGTCCCTAAAAGCTATT...................................................................................................................................................................................................................... 26 1 17 0.06 1 1 0 0 0 0
.............ACCGAGAAGTCCCTAAAAGCTATT...................................................................................................................................................................................................................... 24 0 17 0.06 1 1 0 0 0 0
............CACCGAGAAGTCCCTAAAAGCTATTT..................................................................................................................................................................................................................... 26 0 17 0.06 1 0 1 0 0 0
...........................................GCTTCCGCTAACAGCAGGTA............................................................................................................................................................................................ 20 0 17 0.06 1 1 0 0 0 0
.........................................................CAGGTAGGTCTGGGAACGGT.............................................................................................................................................................................. 20 3 18 0.06 1 1 0 0 0 0
...........................................................GGTAGGTCTGAAAAAGGT.............................................................................................................................................................................. 18 2 19 0.05 1 0 0 1 0 0
......................................................................................................................................................................................................................CTGACAGCAGGTAACACCT.................. 19 3 20 0.05 1 0 0 0 0 1
.........................................................AAGGTAGGTCTGAAAAAGGT.............................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0
..........................................AGCTTCCGCTAGCAGCCTG.............................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6498:333069-333319 - dmo_1278 TATATGCAGTTAGTGGCTCTTCAGGGATTTTCGATAAATTTATCGAAGGCGATTGTCGTCCATCCAGATTTTTGCCAGGACTGGCGAGTGTCTCGTTTTGAAGCTGATGTATTGGTGTTATCCCAAGGTGGCAGGTAAGTATTTACATATACGTTATATGTATTTTTTACATTGTTTATTAATTTCTTCGTTTTATTTCAGTTCGTCTGCGTTCTACTGGCGTCCATTGTGGTTAATTAGTCAATTGTCAA
dp5 4_group3:8638441-8638493 - ------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTATAACAATTTTATGCATTAATTATTAATTTTTAAATTTTTTTTTATTT------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TATATGCAGTTAGTGGCTCTTCAGGGATTTTCGATAAATTTATCGAAGGCGATTGTCGTCCATCCAGATTTTTGCCAGGACTGGCGAGTGTCTCGTTTTGAAGCTGATGTATTGGTGTTATCCCAAGGTGGCAGGTAAGTATTTACATATACGTTATATGTATTTTTTACATTGTTTATTAATTTCTTCGTTTTATTTCAGTTCGTCTGCGTTCTACTGGCGTCCATTGTGGTTAATTAGTCAATTGTCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................TCCATCCAGATTTTTGCCAGGACT.........................................................................................................................................................................24144.576445100180
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................25141.71242400000
..........................................................TCCATCCAGATTTTTGCCAGGACTGG.......................................................................................................................................................................26141.43201900010
..........................................................TCCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................23141.21171400030
..........................................................TCCATCCAGATTTTTGCCAGGACTG........................................................................................................................................................................25141.14161510000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCG........................................28140.86121200000
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGTG......................................................................................................................................27140.86121200000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTC............................................24140.86121200000
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGA....................................................................................................................................................................29140.86121200000
.................TCTTCAGGGATTTTCGATAAATTT..................................................................................................................................................................................................................24160.81131210000
..........................................................................................TCTCGTTTTGAAGCTGATGTATTG.........................................................................................................................................24140.507610000
...................................................................................................................................CAGGTAAGTATTTACATATACGTTA...............................................................................................25130.385500000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGC.........................................27140.365400010
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGC.........................................26140.365500000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCT...........................................25140.365400010
..........................................................TCCATCCAGATTTTTGCCAGGACTGGC......................................................................................................................................................................27140.365500000
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGCG........................................27140.365500000
..........................................................TCCATCCAGATTTTTGCCAGGA...........................................................................................................................................................................22140.365500000
...........................................................CCATCCAGATTTTTGCCAGGACTGG.......................................................................................................................................................................25140.365500000
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCGTC............................................25140.294200020
.................TCTTCAGGGATTTTCGATAAATT...................................................................................................................................................................................................................23160.254400000
.................TCTTCAGGGATTTTCGATAAATTTAT................................................................................................................................................................................................................26160.254400000
..........................................................TCCATCCAGATTTTTGCCAGGACC.........................................................................................................................................................................24140.213000030
....................................................TTGTCGTCCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................29140.213300000
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGTGT.....................................................................................................................................28140.213300000
...........................................................................................CTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................24150.203300000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAAT..............23150.203300000
...........................................................................................CTCGTTTTGAAGCTGATGTATTGGTG......................................................................................................................................26150.203300000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATC.............24150.203200010
.................TCTTCAGGGATTTTCGATAAATTTATCG..............................................................................................................................................................................................................28160.193300000
.................TCTTCAGGGATTTTCGATAAATTTATC...............................................................................................................................................................................................................27160.193300000
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTG.........................................................................................................................................25140.142200000
...........................................CGAAGGCGATTGTCGTCCATCCAGATT.....................................................................................................................................................................................27140.142200000
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCT...........................................24140.142200000
...........................................................................................................................................................................................TCGTTTTATTTCAGTTCGTCTGCGTT......................................26140.142200000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCGT.......................................29140.142200000
...................................................................................................................................CAGGTAAGTATTTACATATACGT.................................................................................................23140.142200000
.....................................................TGTCGTCCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................28140.142200000
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCGTCTGC.........................................28140.142100010
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAA...............22150.132100010
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGTGG...................25150.132200000
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGGTTAA...............25150.132200000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATT.............24150.132200000
..................CTTCAGGGATTTTCGATAAATTT..................................................................................................................................................................................................................23160.132200000
................CTCTTCAGGGATTTTCGATAAATTT..................................................................................................................................................................................................................25160.132200000
.......................................................................................................................................TAAGTATTTACATATACGTTATATGT..........................................................................................26120.081100000
............................................................................................................................................................TATGTATTTTTTACATTGTTTATTA......................................................................25120.081100000
...................................................................................................................................CAGGTAAGTATTTACATATACGTTAT..............................................................................................26130.081100000
......................................................................................................GCTGATGTATTGGTGTTATCCCAAGGTGG........................................................................................................................29130.081100000
...........................................................CCATCCAGATTTTTGCCAGGACTGGC......................................................................................................................................................................26140.071100000
.....................................................TGTCGTCCATCCAGATTTTTGCCAGG............................................................................................................................................................................26140.071100000
.........................................................GTCCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................24140.071100000
......................................................................TTTGCCAGGACTGGCGAGTGTCTCGTT..........................................................................................................................................................27140.071100000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCTGCC........................................28140.071100000
................................................................CAGATTTTTGCCAGGACTGGCGAGT..................................................................................................................................................................25140.071100000
.......................................................TCGTCCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................26140.071100000
................................................................CAGATTTTTGCCAGGACTGGCGAG...................................................................................................................................................................24140.071000010
..........................................................TCCATCCAGATTTTTGCCAGC............................................................................................................................................................................21140.071100000
.........................................................................................................................................................................................CTTCGTTTTATTTCAGTTCGTCTGC.........................................25140.071100000
...........................................................CCATCCAGATTTTTGCCAGGACT.........................................................................................................................................................................23140.071100000
....................................................................................................................GTTATCCCAAGGTGGCAGGTAAG................................................................................................................23140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGACTTT.......................................................................................................................................................................26140.071100000
....................................................................................................................................................................................................TTCAGTTCGTCTGCGTTCTACTGGC..............................25140.071100000
.................................................................................................................................................................................................TATTTCAGTTCGTCTGCGTTCTAC..................................24140.071100000
............................................................CATCCAGATTTTTGCCAGGACTGG.......................................................................................................................................................................24140.071100000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGTCC...........................................25140.071000010
.....................................................................................................................................................................TTTACATTGTTTATTAATTTCTTCGTT...........................................................27140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGTT..........................................................................................................................................................................23140.071000010
............................................................................AGGACTGGCGAGTGTCTCGTTTTGAA.....................................................................................................................................................26140.071100000
........................................................................................TGTCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................27140.071100000
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTC............................................23140.071100000
..........................................................................................TCTCGTTTTGAAGCTGATGTA............................................................................................................................................21140.071100000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCGT.............................................23140.071100000
........................................................................................................................TCCCAAGGTGGCAGGTAAGTATC............................................................................................................23140.071100000
.........................................................................................................................................................................................CTTCGTTTTATTTCAGTTCGTCT...........................................23140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCG.....................................................................................................................................................................28140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGC....................................................................................................................................................................29140.071100000
..........................................................................................TCTCGTTTTGAAGCTGATGTATTGGT.......................................................................................................................................26140.071000001
.................................................................................TGGCGAGTGTCTCGTTTTGAAGCTGA................................................................................................................................................26140.071100000
..........................................................TCCATCCAGATTTTTGCCAGG............................................................................................................................................................................21140.071100000
..................................................................GATTTTTGCCAGGACTGGCGA....................................................................................................................................................................21140.071100000
......................................................................................................................................GTAAGTATTTACATATACGT.................................................................................................20140.071100000
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTG..........................................25140.071100000
....................................................................................................................................................................................................TTCAGTTCGTCTGCGTTCTACTGGCG.............................26140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGACTGGTC.....................................................................................................................................................................28140.071100000
...........................................................CCATCCAGATTTTTGCCAGGACTGGCGA....................................................................................................................................................................28140.071100000
....................................................................................................................GTTATCCCAAGGTGGCAG.....................................................................................................................18140.071100000
.....................................................TGTCGTCCATCCAGATTTTTGCCAGGA...........................................................................................................................................................................27140.071100000
....................................................TTGTCGTCCATCCAGATTTTTGCC...............................................................................................................................................................................24140.071000010
...........................................................CCATCCAGATTTTTGCCAGGAC..........................................................................................................................................................................22140.071100000
........................................................................................................................................................................................TCTTCGTTTTATTTCAGTTCGTCTGCGTT......................................29140.071000001
........................................................................................TGTCTCGTTTTGAAGCTGATGTAT...........................................................................................................................................24140.071100000
........................................................................................TGTCTCGTTTTGAAGCTGATGTATTG.........................................................................................................................................26140.071100000
...................................................................................................................TGTTATCCCAAGGTGGCAG.....................................................................................................................19140.071100000
....................................................TTGTCGTCCATCCAGATTTTTGCCAG.............................................................................................................................................................................26140.071100000
...........................................................CCATCCAGATTTTTGCCAGGACTGGCG.....................................................................................................................................................................27140.071100000
....................................................TTGTCGTCCATCCAGATTTTTGCCAGGA...........................................................................................................................................................................28140.071000001
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTGGT.......................................................................................................................................27140.071100000
.........................................................................................GTCTCGTTTTGAAGCTGATGTATTGG........................................................................................................................................26140.071100000
..........................................................TCCATCCAGATTTTTGCCAGGACTGGCGT....................................................................................................................................................................29140.071100000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGG...................18150.071100000
.................................................................................................................................................................................................................................ATTGTGGTTAATTAGTCAATT.....21150.071100000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATTAG...........26150.071100000
...............................................................................................TTTTGAAGCTGATGTATTGGTGTT....................................................................................................................................24150.071100000
..................................................................................................TGAAGCTGATGTATTGGTGTTA...................................................................................................................................22150.071100000
..........................................................................................................................................................................................................TCGTCTGCGTTCTACTGGCGTCCATTG......................27150.071100000
.......................................................................................................CTGATGTATTGGTGTTATCCCAAGG...........................................................................................................................25150.071100000
...............................................................................................TTTTGAAGCTGATGTATTGGTGTTATCCC...............................................................................................................................29150.071100000
......................................................................................................................................................................................TTTCTTCGTTTTATTTCAGTTCG..............................................23150.071100000
...........................................................................................CTCGTTTTGAAGCTGATGTATTG.........................................................................................................................................23150.071100000
......................................................................................................GCTGATGTATTGGTGTTATCCCAAGG...........................................................................................................................26150.071100000
........................................................................................................................................................................................................................CTGGCGTCCATTGTGGTTAAT..............21150.071100000
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCGTCCA.........................25150.071100000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTTAATTA............25150.071000010
............................................................................................TCGTTTTGAAGCTGATGTATTGG........................................................................................................................................23150.071100000
..................................................................................................TGAAGCTGATGTATTGGTGTTATC.................................................................................................................................24150.071100000
...............................................................................................................................................................................................TTTATTTCAGTTCGTCTC..........................................18150.071100000
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCG.............................21150.071100000
.........................................................................................................................................................................................................TTCGTCTGCGTTCTACTGGCGTCCATTG......................28150.071100000
......................................................................................................................................................................................................................TACTGGCGTCCATTGTGGTT.................20150.071100000
...................................................................................................................................................................................TAATTTCTTCGTTTTATTTCAGTTCG..............................................26150.071100000
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGG...................21150.071100000
...............................................................................................TTTTGAAGCTGATGTATTGG........................................................................................................................................20150.071100000
....................................................................................................................................................................................................................TCTACTGGCGTCCATTGTGGTC.................22150.071100000
............................TTTCGATAAATTTATCGAAGGCGATTG....................................................................................................................................................................................................27150.071100000
............................................................................................................................................................................................................................CGTCCATTGTGGTTAATC.............18150.071100000
...................................................................................................GAAGCTGATGTATTGGTGTTATCCC...............................................................................................................................25150.071000010
.....................................................................................................AGCTGATGTATTGGTGTTATCCCAAGA...........................................................................................................................27150.071100000
..................................................................................................TGAAGCTGATGTATTGGTGTTATCCC...............................................................................................................................26150.071100000
...................................................................................................................................................................................................................TTCTACTGGCGTCCATTGTGGTTA................24150.071100000
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGTGGTTC................28150.071100000
................................................................................................TTTGAAGCTGATGTATTGGTGTTATC.................................................................................................................................26150.071100000
......................................................................................................GCTGATGTATTGGTGTTATCCC...............................................................................................................................22150.071000010
............................................................................................TCGTTTTGAAGCTGATGTATTGGTG......................................................................................................................................25150.071100000
...............................................................................................................................................................................................................TGCGTTCTACTGGCGTCCATTGT.....................23150.071100000
.......................................................................................................................................................................................................................ACTGGCGTCCATTGTGGTTAATC.............23150.071100000
.......................................................................................................................................................................................TTCTTCGTTTTATTTCAGTTCG..............................................22150.071100000
..............................................................................................GTTTTGAAGCTGATGTATTGGTGT.....................................................................................................................................24150.071000010
..TATGCAGTTAGTGGCTCTTCAGGG.................................................................................................................................................................................................................................24160.061100000
..................CTTCAGGGATTTTCGATAAATTTATCG..............................................................................................................................................................................................................27160.061100000
.................TCTTCAGGGATTTTCGATAAATTTA.................................................................................................................................................................................................................25160.061100000
.................TCTTCAGGGATTTTCGATAAA.....................................................................................................................................................................................................................21170.061100000
.................TCTTCAGGGATTTTCGATAAATTTT.................................................................................................................................................................................................................25170.061100000
...ATGCAGTTAGTGGCTCTTCAG...................................................................................................................................................................................................................................21170.061000001
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTATAACAATTTTATGCATTAATTATTAATTTTTAAATTTTTTTTTATTT------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads

Generated: 05/18/2015 at 12:05 AM