ID:

dmo_123

 Coordinate:

scaffold_6482:39496-39568 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.6 -16.5 -16.4 -16.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Helitron-1_DVirRCHelitron+
mature
  1. dmo_123  scaffold_6482:39497-39521 -
  2. scaffold_6482:591408-591432 -
star

Sense Strand Reads

TGCTTCAAATTAAGCGACCTGACAATTTCGGCCAGTCCTTCAGGCGAAACTAAAGGTGGAAGTTTAATGACCCGTACATTATTATCTCCTAAATCTGTACTTTCATCACTTTCATTAATGTTTAGAACATTTAATTGTGGATTAATTTCGGGCAATCCCAATACCCTAAATCT
***********************************.....((.......((((((((((((((...((((...(((((.................)))))..)))).)))))))))....)))))..........))************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
.................................................................................................TACTTTCATCACTTTCATTAATGTT................................................... 25 0 2 177.00 354 261 77 16 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTT.................................................. 26 0 2 79.50 159 146 10 2 1 0
..................................................TAAAGGTGGAAGTTTAATGACCCGTAC................................................................................................ 27 0 1 55.00 55 48 2 1 4 0
..................................................TAAAGGTGGAAGTTTAATGACCCGTA................................................................................................. 26 0 1 48.00 48 37 5 1 5 0
..................................................TAAAGGTGGAAGTTTAATGACCCG................................................................................................... 24 0 1 32.00 32 29 3 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGT.................................................... 24 0 3 27.00 81 61 6 11 3 0
..................................................TAAAGGTGGAAGTTTAATGACCCGT.................................................................................................. 25 0 1 22.00 22 18 4 0 0 0
..................................................TAAAGGTGGAAGTTTAATGACCCGTACA............................................................................................... 28 0 1 18.00 18 16 2 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATGTT................................................... 24 0 2 17.00 34 32 2 0 0 0
..................................................TAAAGGTGGAAGTTTAATGACCC.................................................................................................... 23 0 1 15.00 15 5 10 0 0 0
.........TTAAGCGACCTGACAATTTCGGCCAG.......................................................................................................................................... 26 0 1 12.00 12 12 0 0 0 0
..........................................................................................................................TAGAACATTTAATTGTGGATTAATT.......................... 25 0 2 10.00 20 19 1 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATGTTT.................................................. 25 0 2 9.00 18 18 0 0 0 0
.........TTAAGCGACCTGACAATTTCGGCC............................................................................................................................................ 24 0 1 7.00 7 6 1 0 0 0
.........TTAAGCGACCTGACAATTTCGGCCAGTCC....................................................................................................................................... 29 0 1 6.00 6 6 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATG..................................................... 23 0 3 6.00 18 15 1 2 0 0
..................................................TAAAGGTGGAAGTTTAATGACC..................................................................................................... 22 0 2 5.50 11 5 5 1 0 0
..................................................TAAAGGTGGAAGTTTAATGACCCGTACAT.............................................................................................. 29 0 1 5.00 5 4 1 0 0 0
...TTCAAATTAAGCGACCTGACAATTTC................................................................................................................................................ 26 0 1 5.00 5 5 0 0 0 0
....TCAAATTAAGCGACCTGACAATTTCGGC............................................................................................................................................. 28 0 1 5.00 5 4 1 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCA................... 24 0 2 5.00 10 10 0 0 0 0
...TTCAAATTAAGCGACCTGACAATT.................................................................................................................................................. 24 0 1 4.00 4 1 3 0 0 0
...TTCAAATTAAGCGACCTGACAATTT................................................................................................................................................. 25 0 1 4.00 4 3 1 0 0 0
...TTCAAATTAAGCGACCTGACAATTTCG............................................................................................................................................... 27 0 1 4.00 4 2 2 0 0 0
....TCAAATTAAGCGACCTGACAATTTCGGCC............................................................................................................................................ 29 0 1 4.00 4 1 3 0 0 0
...............................................................................TATTATCTCCTAAATCTGTACTTTCA.................................................................... 26 0 1 4.00 4 4 0 0 0 0
.................................................................................................................................TTTAATTGTGGATTAATTTCGGGCA................... 25 0 2 3.50 7 6 0 0 1 0
................................................................................................CTACTTTCATCACTTTCATTAATGTT................................................... 26 1 2 3.00 6 2 4 0 0 0
.........TTAAGCGACCTGACAATTTCGGCCAGTC........................................................................................................................................ 28 0 1 3.00 3 2 1 0 0 0
.......................................................................................................................................TGTGGATTAATTTCGGGCAATCCCAA............ 26 0 2 3.00 6 6 0 0 0 0
...................................................AAAGGTGGAAGTTTAATGACCCGTAC................................................................................................ 26 0 1 3.00 3 3 0 0 0 0
...............................................................................................TGTACTTTCATCACTTTCATTAATGT.................................................... 26 0 3 3.00 9 9 0 0 0 0
......................................TTCAGGCGAAACTAAAGGTGGAAGTT............................................................................................................. 26 0 2 3.00 6 5 1 0 0 0
...................................................AAAGGTGGAAGTTTAATGACCCG................................................................................................... 23 0 1 3.00 3 3 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTTAG................................................ 28 0 2 2.50 5 5 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTC................................................... 25 1 3 2.33 7 0 7 0 0 0
...............................................................................................TGTACTTTCATCACTTTCATTAATG..................................................... 25 0 3 2.33 7 7 0 0 0 0
...................................................AAAGGTGGAAGTTTAATGACCCGT.................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTTA................................................. 27 0 2 2.00 4 4 0 0 0 0
..........TAAGCGACCTGACAATTTCGGCCAGTC........................................................................................................................................ 27 0 1 2.00 2 1 1 0 0 0
..............................................................................................................................................TAATTTCGGGCAATCCCAATACCCT...... 25 0 2 2.00 4 3 1 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATGT.................................................... 23 0 3 2.00 6 6 0 0 0 0
...................................................................................................CTTTCATCACTTTCATTAATGTT................................................... 23 0 2 2.00 4 0 4 0 0 0
..............................................................................................................................................TAATTTCGGGCAATCCCAATACCCTA..... 26 0 2 2.00 4 3 1 0 0 0
.................................................................................................................................TTTAATTGTGGATTAATTTCGGGC.................... 24 0 2 2.00 4 2 1 1 0 0
...............................................................................................TGTACTTTCATCACTTTCATTAATGTT................................................... 27 0 2 2.00 4 3 1 0 0 0
..........TAAGCGACCTGACAATTTCGGCCAGTCC....................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0
..............................................................................................................................................TAATTTCGGGCAATCCCAATACCC....... 24 0 2 2.00 4 3 1 0 0 0
.................................................................................................TGCTTTCATCACTTTCATTAATGTT................................................... 25 1 2 2.00 4 0 4 0 0 0
...TTCAAATTAAGCGACCTGACAATTTCGGC............................................................................................................................................. 29 0 1 2.00 2 2 0 0 0 0
...............................................................................TATTATCTCCTAAATCTGTACTTTC..................................................................... 25 0 1 2.00 2 2 0 0 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATTAATG..................................................... 27 0 3 1.67 5 5 0 0 0 0
.......................................................................................................................................TGTGGATTAATTTCGGGCAATCCC.............. 24 0 2 1.50 3 2 1 0 0 0
.......................................................................................................................................TGTGGATTAATTTCGGGCAATCC............... 23 0 2 1.50 3 2 1 0 0 0
......................................................................................................................................TTGTGGATTAATTTCGGGCAATCCCAA............ 27 0 2 1.50 3 2 1 0 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCCCA............. 29 0 2 1.50 3 3 0 0 0 0
.........................................................................................................................TTAGAACATTTAATTGTGGATTAATT.......................... 26 0 2 1.50 3 3 0 0 0 0
...TTCAAATTAAGCGACCTGACAAT................................................................................................................................................... 23 0 2 1.50 3 2 1 0 0 0
................................................................................................CTACTTTCATCACTTTCATTAATGTTT.................................................. 27 1 2 1.50 3 2 1 0 0 0
........................................................................................................ATCACTTTCATTAATGTTT.................................................. 19 0 2 1.50 3 1 2 0 0 0
.....................................................................................................TTCATCACTTTCATTAATGTTT.................................................. 22 0 2 1.50 3 3 0 0 0 0
......................................TTCAGGCGAAACTAAAGGTGGAAGT.............................................................................................................. 25 0 2 1.50 3 3 0 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCCC.............. 29 0 2 1.50 3 3 0 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATG..................................................... 22 0 3 1.33 4 4 0 0 0 0
..................................................TAAAGGTGGAACTTTAATGACCCGTAC................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
..................................................TGAAGGTGGAAGTTTAATGACCCGTACA............................................................................................... 28 1 1 1.00 1 0 1 0 0 0
.................................................GTAAAGGTGGAAGTTTAATGACCCG................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..........TAAGCGACCTGACAATTTCGGCCAG.......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................TTTAATTGTGGATTAATTTCGGGCAAT................. 27 0 2 1.00 2 2 0 0 0 0
.........TTAAGCGACCTGACAATTTCGGCCAGT......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................TAAAGGCGGAAGTTTAATGACCCG................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..................................................TGAAGGTGGAAGTTTAATGACCCGTA................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
.........................................................................................................................................TGGATTAATTTCGGGCAATCCCAATACC........ 28 0 2 1.00 2 2 0 0 0 0
.................................................TTAAAGGTGGAAGTTTAATGACCCGT.................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
..................................................TGAAGGTGGAAGTTTAATGACCC.................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCCC.............. 28 0 2 1.00 2 1 1 0 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATTAATGTT................................................... 29 0 2 1.00 2 2 0 0 0 0
..........TAAGCGACCTGCCAATTTCGGCCAGTC........................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCC............... 27 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................TTTAATTGTGGATTAATTTCGGGCAA.................. 26 0 2 1.00 2 2 0 0 0 0
....................................................AAGGTGGAAGTTTAATGACCCGTA................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...................TAACAATTTCGGCCAGTCCTTCAGGC................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTTAGA............................................... 29 0 2 1.00 2 2 0 0 0 0
...................................................AAAGGTGGAAGTTTAATGACCCGTA................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
..........................TTCGGCCAGTCCTTCAGGCGAAA............................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................TAATTTCGGGCAATCCCAATACC........ 23 0 2 1.00 2 0 2 0 0 0
....................................CCTTCAGGCGAAACTAAAGGTG................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TGGATTAATTTCGGGCAATCCCAATACCC....... 29 0 2 1.00 2 2 0 0 0 0
..................................................TAAAGGTGGAAGTTTAATTACCCGTA................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
..........TAAGCGACCTGACAATTTCGGCC............................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
..........................................................................TACATTATTATCTCCTAAATCTGTACTT....................................................................... 28 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................TGTGGATTAATTTCGGGCAATCCCA............. 25 0 2 1.00 2 2 0 0 0 0
..................................................TAAAGGTGGACGTTTAATGACCCGTA................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
..................................................TAAAGGTGGAAGTTTAATGACCCGC.................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
TGCTTCAAATTAAGCGACCTGACAATT.................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.........TTAAGCGACCTGACAATTTCGGCCA........................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
....................................CCTTCAGGCGAAACTAAAGGTGGAAG............................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........AAGCGACCTGACAATTTCGGC............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................ATCACTTTCATTAATGTT................................................... 18 0 2 1.00 2 1 1 0 0 0
....TCAAATTAAGCGACCTGACAATTTCGG.............................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.................................................................................................TAATTTCATCACTTTCATTAATGTT................................................... 25 1 2 1.00 2 0 2 0 0 0
.......AATTAAGCGACCTGACAATTTCGGCC............................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..........................TTCGGCCAGTCCTTCAGGCGAAACTAA........................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.....................................................AGCTGGAAGTTTAATGACCC.................................................................................................... 20 1 1 1.00 1 0 1 0 0 0
..............................................GATCTAAAGGTGGAAGTTTAATAACCCG................................................................................................... 28 3 1 1.00 1 0 1 0 0 0
......................................................................................................................................TTGTGGATTAATTTCGGGCAATCC............... 24 0 2 1.00 2 0 2 0 0 0
.................................................................................................TTCTTTCATCACTTTCATTAATGTT................................................... 25 1 2 1.00 2 0 2 0 0 0
.................................................................................................TACTTTCATCACTTTCATT......................................................... 19 0 3 0.67 2 1 1 0 0 0
................................................................................................GTACTTTCATCACTTTCATTAATGT.................................................... 25 0 3 0.67 2 1 0 1 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATTAAT...................................................... 26 0 3 0.67 2 2 0 0 0 0
..............................................................................................CTGTACTTTCATCACTTTCATTAATGT.................................................... 27 0 3 0.67 2 2 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGC.................................................... 24 1 3 0.67 2 0 2 0 0 0
..............................................................................................CTGTACTTTCATCACTTTCATTAATG..................................................... 26 0 3 0.67 2 2 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATTTT................................................... 25 1 2 0.50 1 0 0 1 0 0
...........................................................................................................................................GATTAATTTCGGGCAATCCCAATACCC....... 27 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................TTTGGATTAATTTCGGGCAATCCCA............. 25 1 2 0.50 1 0 1 0 0 0
.................................................................................................GACTTTCATCACTTTCATTAATGTT................................................... 25 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCC............... 28 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................TAGAACATTTAATTGTGGATTAAT........................... 24 0 2 0.50 1 1 0 0 0 0
..................................................................................................................TGAATGTTTAGAACATTTAATTGTGGAT............................... 28 1 2 0.50 1 0 1 0 0 0
.................................................................................................................................TTTAATGGTGGATTAATTTCGGGCAAT................. 27 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................TGAATTGTGGATTAATTTCGGGC.................... 23 1 2 0.50 1 0 1 0 0 0
...TGCAAATTAAGCGACCTGACAAT................................................................................................................................................... 23 1 2 0.50 1 0 1 0 0 0
................................................ACTAAAGGTGGAAGTTTAATGACC..................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
................................................................................................ATACTTTCATCACTTTCATTAATGTTT.................................................. 27 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGC...................... 21 1 2 0.50 1 0 1 0 0 0
.....................................................................................................TTCATCACTTTCATTAATGTT................................................... 21 0 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTTG................................................. 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................TTTCATCACTTTCATTAATGTTT.................................................. 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATATTT.................................................. 26 1 2 0.50 1 1 0 0 0 0
.....................................................AGGTGGAAGTTTAATGACC..................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
......................................................................................................................................TTGTGGATTAATTTCGGGC.................... 19 0 2 0.50 1 0 0 0 1 0
.......................................................................................................................................TGCGGATTAATTTCGGGCAATC................ 22 1 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTTC................................................. 27 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGGCA................... 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................AACATTTAATTGTGGATTAATTTCGGGC.................... 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................TTTCATCACTTTCATTAATGTTTAGAA.............................................. 27 0 2 0.50 1 1 0 0 0 0
........................................CAGGCGAAACTAAAGGTGGAA................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
......................................................................................................TCATCACTTTCATTAATGTTTAGAACA............................................ 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................TACGTTCATCCCTTTCATTAATGTT................................................... 25 2 2 0.50 1 0 1 0 0 0
...............................................................................................AATACTTTCATCACTTTCATTAATGTTT.................................................. 28 2 2 0.50 1 1 0 0 0 0
................................................................................................GGACTTTCATCACTTTCATTAATGTT................................................... 26 1 2 0.50 1 0 1 0 0 0
......................................TTCAGGCGAAATTAAAGGTGGAAGT.............................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.................................................................................................TACCTTCATCACTTTCATTAATGTT................................................... 25 1 2 0.50 1 0 1 0 0 0
......................................................................................................TGATCACTTTCATTAATGTT................................................... 20 1 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAATGTTC.................................................. 26 1 2 0.50 1 1 0 0 0 0
...................................................AAAGGTGGAAGTTTAATGAC...................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
..................................................TGATGGTGGAAGTTTAATGACCCGA.................................................................................................. 25 3 2 0.50 1 0 1 0 0 0
......................................................................................................................................TTGTGGATTAATTTCGGGCAATCCCC............. 26 1 2 0.50 1 1 0 0 0 0
..............................................................................................AGATACTTTCATCACTTTCATTAATGTTT.................................................. 29 3 2 0.50 1 1 0 0 0 0
................................................................................................................................................ATTTCGGGCAATCCCAATACCCTA..... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................TTTCATCACTTTCATTAATGTT................................................... 22 0 2 0.50 1 1 0 0 0 0
......................................TTCAGGCGAAACTAAAGGTGGAAG............................................................................................................... 24 0 2 0.50 1 0 0 0 1 0
..............................................................................................GACTACTTTCATCACTTTCATTAATGTT................................................... 28 3 2 0.50 1 1 0 0 0 0
....................................................................................................................................AATTGTGGATTAATTTCGGGC.................... 21 0 2 0.50 1 0 0 1 0 0
...TTCAAATTAAGCGACCTGACA..................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
......................................TGCTGGCGAAACTAAAGGTGGAAG............................................................................................................... 24 2 2 0.50 1 0 1 0 0 0
......................................................................................................TCATCACTTTCATTAATGTT................................................... 20 0 2 0.50 1 0 1 0 0 0
.................................................................................................TGCTTTCATCACTTTCATTAATGTTT.................................................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGG..................... 21 0 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTCGTCACTTTCATTAATGTT................................................... 25 1 2 0.50 1 0 0 1 0 0
...................................................................................................................................................TCGGGCAATCCCAATACCC....... 19 0 2 0.50 1 0 1 0 0 0
....................................................................................................TGTCATCACTTTCATTAATGTT................................................... 22 1 2 0.50 1 0 1 0 0 0
..................................................TAAAGGTGGAAGTTTAATG........................................................................................................ 19 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................TAAATTCGGGCAATCCCAATACCC....... 24 1 2 0.50 1 0 1 0 0 0
......................................................................................................................................TTGTGGATTAATTTCTGGCAATCC............... 24 1 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTAATCACTTTTATTGATGTT................................................... 25 3 2 0.50 1 0 0 1 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATT................ 27 1 2 0.50 1 1 0 0 0 0
................................................................................................ATACTTTCATCACTTTCATTAATGTT................................................... 26 1 2 0.50 1 1 0 0 0 0
TGCTTCAAATTAAGCGACCTGACAAT................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCCA.............. 29 1 2 0.50 1 1 0 0 0 0
.................................................................................................TAATTTGATCACTTTCATTAATGTTC.................................................. 26 3 2 0.50 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATCAATGTT................................................... 25 1 2 0.50 1 1 0 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATGTTTAG................................................ 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................TAATTTCATCACTTTCATTAATGTTT.................................................. 26 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................................TAATTTCGGGCAATCCCAATACCCTAA.... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TTTCGGGCAATCCCAATACCCTAAATC. 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................TACTTTCATCAGTTTCATTAATGTT................................................... 25 1 2 0.50 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTACTGTT................................................... 25 1 2 0.50 1 0 0 1 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAAT................. 26 0 2 0.50 1 0 1 0 0 0
........................................................................................................................TTTAGAACATTTAATTGTGGATTAATT.......................... 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................TTCGGGCAATCCCAATACCCTAAATC. 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................AATTGTGGATTAATTTCGAGC.................... 21 1 2 0.50 1 0 1 0 0 0
...................................................................................................CTTTCATCACTTTCATTAATGTTT.................................................. 24 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGGCAA.................. 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCACTAATGTTT.................................................. 26 1 2 0.50 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAACGTT................................................... 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................AATTTCGGGCAATCCCAATACCCTA..... 25 0 2 0.50 1 0 1 0 0 0
..................................................TAAAGGTGGAAGTTTAATGAC...................................................................................................... 21 0 2 0.50 1 0 0 1 0 0
...................................................................................................................................TAATTGTGGATTAATTTCGGGCAATC................ 26 0 2 0.50 1 1 0 0 0 0
.......................................................................................................CATCACTTTCATTAATGTT................................................... 19 0 2 0.50 1 1 0 0 0 0
TGCTTCAAATTAAGCGACCTGACAAC................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0
..................................................................................................................................TTAATTGTGGATTAATTTCGGG..................... 22 0 2 0.50 1 0 0 1 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATT......................................................... 23 0 3 0.33 1 1 0 0 0 0
.................................................................................................................................TGAAATTGTGGATTAATTTCGGGC.................... 24 2 3 0.33 1 0 1 0 0 0
.................................................................................................TACTTTCCTCACTTTCATTAATGT.................................................... 24 1 3 0.33 1 0 1 0 0 0
.....................................................................................................TTCATCACTTTCATTAATG..................................................... 19 0 3 0.33 1 0 0 1 0 0
................................................................................................GTACTTTCATCACTTTCATTAATG..................................................... 24 0 3 0.33 1 1 0 0 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATTAATGT.................................................... 28 0 3 0.33 1 1 0 0 0 0
.................................................................................................TGCTTTCATCACTTTCATTAATGTC................................................... 25 2 3 0.33 1 0 1 0 0 0
.............................................................................................TCTGTACTTTCATCACTTTCATTAA....................................................... 25 0 3 0.33 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAA....................................................... 21 0 3 0.33 1 0 1 0 0 0
.................................................................................................TAATTTCATCACTTTCATTAATGT.................................................... 24 1 3 0.33 1 0 1 0 0 0
..................................................................................................ACTTTCATCACTTTCATTAATGTGTAG................................................ 27 1 3 0.33 1 1 0 0 0 0
.................................................................................................TGCTTTCATCACTTTCATTAATGT.................................................... 24 1 3 0.33 1 0 1 0 0 0
.................................................................................................TACTTTCCTCACTTTCATTAATG..................................................... 23 1 3 0.33 1 0 1 0 0 0
.................................................................................................TACTTTCATCACTTTCATTAAT...................................................... 22 0 3 0.33 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCATC......................................................... 19 1 3 0.33 1 0 1 0 0 0
................................................................................................CTACTTTCATCACTTTCATTAATGT.................................................... 25 1 3 0.33 1 1 0 0 0 0
.................................................................................................TACTTTCATCACTTTCAT.......................................................... 18 0 3 0.33 1 1 0 0 0 0
................................................................................................ATACTTTCATCACTTTCATTAATG..................................................... 24 1 3 0.33 1 1 0 0 0 0
.............................................................................................ATTGTACTTTCATCACTTTCATTAATGT.................................................... 28 2 3 0.33 1 1 0 0 0 0
............................................................................................................................................AGTAATTTCGGGAAATCCCAATACCC....... 26 2 3 0.33 1 0 1 0 0 0
.....................................................................................CTCCTAACTATGTACTTCCA.................................................................... 20 3 11 0.27 3 2 0 0 0 1
......................................................................................................................TGTTTAGAGCGTTTAGTTGTG.................................. 21 3 9 0.11 1 0 0 1 0 0
.................................................CAAAAAGTGGAAGTTTAA.......................................................................................................... 18 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ACGAAGTTTAATTCGCTGGACTGTTAAAGCCGGTCAGGAAGTCCGCTTTGATTTCCACCTTCAAATTACTGGGCATGTAATAATAGAGGATTTAGACATGAAAGTAGTGAAAGTAATTACAAATCTTGTAAATTAACACCTAATTAAAGCCCGTTAGGGTTATGGGATTTAGA
************************************.....((.......((((((((((((((...((((...(((((.................)))))..)))).)))))))))....)))))..........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
....................................................................................AGAGGATTTAGACATGAAAGTAG.................................................................. 23 0 1 18.00 18 15 2 0 1
.................................................................................AATAGAGGATTTAGACATGAAAGTAG.................................................................. 26 0 1 14.00 14 5 8 0 1
..................................................................................ATAGAGGATTTAGACATGAAAGTAG.................................................................. 25 0 1 9.00 9 6 1 1 1
.....................................GAAGTCCGCTTTGATTTCCACCT................................................................................................................. 23 0 1 9.00 9 7 0 1 1
................................................................................TAATAGAGGATTTAGACATGAAAGTAG.................................................................. 27 0 1 5.00 5 5 0 0 0
....................................GGAAGTCCGCTTTGATTTCCACCT................................................................................................................. 24 0 1 2.00 2 1 0 1 0
...............................................................................ATAATAGAGGATTTAGACATGAAAGTAG.................................................................. 28 0 1 2.00 2 1 1 0 0
................................................................................AAATAGAGGATTTAGACATGAAAGTAG.................................................................. 27 1 1 2.00 2 2 0 0 0
.................................................................................AATAGAGGATTTAGACATGAAAGT.................................................................... 24 0 1 1.00 1 1 0 0 0
..................................CAGGAAGTCCGCTTTGAT......................................................................................................................... 18 0 1 1.00 1 0 0 1 0
.................................................................................................................................................AAAGCCCGTTAGGGTTATGGGATTTA.. 26 0 2 1.00 2 2 0 0 0
...................................AGGAAGTCCGCTTTGATTTCCACCT................................................................................................................. 25 0 1 1.00 1 1 0 0 0
................................................................................AATTAGAGGATTTAGACATGAAAGTAG.................................................................. 27 2 1 1.00 1 0 1 0 0
......................................AAGTCCGCTTTGATTTCCACCT................................................................................................................. 22 0 2 1.00 2 2 0 0 0
...............................................................................GTAATAGAGGATTTAGACATGAAAGTAG.................................................................. 28 1 1 1.00 1 1 0 0 0
..................................................................................ATAGATGATATAGACAAGAAAGTAG.................................................................. 25 3 1 1.00 1 0 0 0 1
.........................AAAGCCGGTCAGGAAGTCCGCTTTGATT........................................................................................................................ 28 0 1 1.00 1 1 0 0 0
......................................................................................AGGATTTAGACATGAAAGTAG.................................................................. 21 0 1 1.00 1 1 0 0 0
................................GTCAGGAAGTCCGCTTTGATTTCCACCT................................................................................................................. 28 0 1 1.00 1 1 0 0 0
.....................................GAAGTCCGCTTTGATTTCCACC.................................................................................................................. 22 0 1 1.00 1 1 0 0 0
.....................................................................................GAGGATTTAGACATGAAAGTAG.................................................................. 22 0 1 1.00 1 1 0 0 0
....................................................................................AGAGGATTTAGACATGAAAGTA................................................................... 22 0 1 1.00 1 1 0 0 0
....................................GGAAGTCCGCTTTGATTTCCTCCT................................................................................................................. 24 1 1 1.00 1 0 0 1 0
...............................................................................CTAATAGAGGATTTAGACATGAAAGTAG.................................................................. 28 1 1 1.00 1 0 1 0 0
.......................................................................................................................CAAATCTTGTAAATTAGCACCT................................ 22 1 2 0.50 1 0 0 1 0
....................................................................................................................TTACAAATCTTGTAAATTAACACC................................. 24 0 2 0.50 1 0 0 1 0
......................................................................................................................................................CCGTTAGGGTTATGGGATTGA.. 21 1 2 0.50 1 0 0 1 0
......................................................................................................................................................CCGTTAGGGTTATGGGATTTA.. 21 0 2 0.50 1 0 0 0 1
................................................................................................................................................TAAAGCCCGTTAGGGTTATGGGATTTA.. 27 0 2 0.50 1 1 0 0 0
........................................GTCCGCTTTGATTTCCACC.................................................................................................................. 19 0 2 0.50 1 1 0 0 0
......................................................................................................................................................CCGTTAGGGTTATGGGATTT... 20 0 2 0.50 1 0 0 1 0
.......................................................................................................................CAAATCTTGTAAATTAACACCTAATT............................ 26 0 2 0.50 1 1 0 0 0
.......................................AGTCCGCTTTGATTTCCACCT................................................................................................................. 21 0 2 0.50 1 0 0 1 0
.................................................................................................................................................AAAGCCCGTTAGGGTTATG......... 19 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................CCCGTTAGGGTTATGGGATTTA.. 22 0 2 0.50 1 1 0 0 0
...........................................................................................................TGAAAGTAATTACAAATCTTGTAAAT........................................ 26 0 2 0.50 1 1 0 0 0
......................................................................................................................ACAAATCTTGTAAATTAACACC................................. 22 0 2 0.50 1 1 0 0 0
.....................................................................................GAGGATTGATACATGAAGGT.................................................................... 20 3 11 0.18 2 2 0 0 0
.....................................................................................GAGGATTGATACATGAAGG..................................................................... 19 3 19 0.11 2 2 0 0 0
......................................................................................AGGATTGATACATGAAAGTTG.................................................................. 21 3 11 0.09 1 0 1 0 0
...............................................................AATTACTAGGCTTGTAGTAA.......................................................................................... 20 3 13 0.08 1 0 1 0 0
..................................................................................ATTGAGGATTGATACATGAA....................................................................... 20 3 15 0.07 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6482:39446-39618 - dmo_123 TGCTTCAAATTAAGCGACCTGACAATTTCGGCCAGTCCTT----CAGGCGAA--ACTAAAGGTGGAAGTTTAATGACCCGTACATTATTATCTCCTAAATCTGTACTTTCATCACTTTCATTAATGTTTAGAACATTTAATTGTGGATTAATTTCGGGCAATCCCAATACCCTAAATCT------------
droVir3 scaffold_13045:1710379-1710551 + TGCTTTAAATTAAGTGACCTGACTATATCTGCTAAGCTTT----CAGCTGAA--ACTATAGCTGTAAGTTTTATTAATCGGACATTGTTATCTTCTAAATCTAGATTCTCGTCATTTCCATTAATGTTTAAGACATTTAAATGAGGATTTATTTCTGGGAATCCTAATACGCGAAATCT------------
droGri2 scaffold_14906:13475828-13475982 - TGCCTTAAATTGCGAGATCTAATAATATTTCATAAGTTCT----CAGTTGAA--AATAAAGCTGGTAATTTAATTAGACGAACATTATTATCTCCTAAGTTTTCATCTTTATTATTCCCATCAATGTTTAAAACATTTAATTGAGAATTTATTTCTGGAAA------------------------------
droWil2 scf2_1100000002609:6127-6296 + TGCCTAAAATTAAGAGACCTAACAACACTTGCCAGATTTT----CAGGCGAA--ATTATTGGCGGAAGTTTAATAACTCGGATATCATTGTCTGT---ATCCTGTGGTTGGTCATTGCCATTTAAATTTAACAGATTGAGCTGAGAGCTAATTTCAGGAAATGCTAAAACTCTAAACTC------------
dp5 Unknown_group_636:6010-6172 - TGCTTCAAATTAAGCGATCTAATCAAATTAGCAAAAATAT----TAAGGGAA--ACAATAGGAGGAAGCTTAATTAATCGAATACTTCTATCTTG---ATCCGCTGC------CTGGTCATTCAAGTTCAAAACATTTATCTGGGAACTTATTTCTGGAATCGCTAA-GCCATAAACTC------------
droPer2 scaffold_1470:799-961 + TGCTTCAAATTAAGCGATCTAATCAAATTAGCTAAAATAT----TAAGGGAA--ACAATAGGAGGAAGCTTAATTAATCGAATACTTCTATCTTG---ATCCGCTGC------CTGGTCATTCAAGTTCAAAACATTTATCTGGGAACTTATTTCTGGAATCGCTAA-GCCATAAACTC------------
droAna3 scaffold_10580:5798-5967 + TGTTTGTAGTTGAGCGACCGAGTTAGCGAGCAAAGGTCAT----CATTGGAA--ACTAACGGGGGGAGTCTAATTAATTGAAGTTCGCCATCTTCTTCAGGATTATTCGTTGCATTGTCAT---CCTGAAGAATATTTACGTTCCGCTCTATATTAGGCACTGCTAAAGCTCTAAATTC------------
droBip1 scf7180000396268:2087-2256 + TGCTTGTAGTTGAGGGACCGAGTTAGCGAACAAAGGTCAT----CATTGGAA--ACTAACGGGGGGTGTCTAATTAATTGAAGTTCGCCATCTTCTTCAGGGTAATTTATCGCGTTCTCAT---CCTGAAGAATATTTACGTCCCGCTCTATATTTGGTACTGCCAAAGATCTAAACTC------------
droKik1 scf7180000302472:3539325-3539490 + TGCTTTGCGTTAAGCGACCTGGACAG-CGAGCAAGGTTAT----CATCAGAA--ACTAACGGGGGAAGTCTAATTAGTTGAAGTTCGCCATCTTC---TGTGTTATTTACAGCATTGTCATCTTGG---AGTATATTAACGTTTTGTCCGACGTTTGGTACCGCCAAGGCCCTAAATTC------------
droFic1 scf7180000453278:18328-18491 - TGTTTTAAATTGAGCGACCGGGTAAGCGAGCAAAGATTTT----CTTCTGAA--ACCAACGGCGGAAGTCTAATAAGTTGAAGCTCACCCTCTTC---AACG---TTAGCAGCATCATCGT---CCTCAAACATATTTATGTTTTGGCCAACGTTTGGCACTGCCAAAGCTCTGAACTC------------
droEle1 scf7180000491000:1284751-1284823 - TTAATTTAT---------------------------------------------------------------------------------------AAAGGTGTACTTTTATTAATTTTTTATTTGATCGGTACACTTTAATTTGCATTAATTTC-------------------AAGTA------------
droRho1 scf7180000775395:604-773 - TGCTTTAAATTAAGAGACCTAACTAAGGTGGCTAAATTTT----CAGGGGAA--ATAATTGGCGGAAGCTTTATTATGCGGATATTGCTATCCGG---ATCTACTTCCTGAACACGGTCGTCTAAGTTTAAAACATTTATTTGAGAAGATATTTCTGGAAAAGCTAAGGCCCTAAACTC------------
droBia1 scf7180000301229:25434-25605 - TGCTTTAAGTTGAGAGATCTAACTAAAGTTGGTAAGTTTT----TAGGGAAAATATAACTGGCGGGAGCTTTATTATCCGGATATTGGTACATGG---ATCAACTTCTTAAACATCGTTGCTTAACTTCAAAACATTTATTTGAGAATTTATTTCCGGAAAAGCTAAGGCCTTAAACTC------------
droTak1 scf7180000412296:19379-19548 + TGCTTTAAATTAAGAGATCTAACTAAGGTGGCTAAACTTT----CAGGGGAA--ATAATTGACGGGAGCTTTATTATGCGGATATTGCTATCCGG---ATCTACTTCCTGAACACGGTCGTCTAAGTTTAAAACATTGATTTGAGAAGATATTTCTGGAAAAGCTAAGACCCTAAACTC------------
droEug1 scf7180000409537:8651-8820 + TGCCTTAAATTAAGGGATCTAACTAAGGTTGCTAAGTTTT----CAGGTGAA--ATAATTGGCGGGAGCTTTATAACTCGGATATTGTTATCCGG---TTCTACATCTGAAACATTGTTGTTTAAGTTTAAGACATTAATTTGAGAAGATATTTCTGGAAACGCTAAGGCCCTAAACTC------------
dm3 chr3L:23630268-23630384 + TGCTCCAAATTTATAGATCTAACTAAATCTGCTAAGTTTAAATAAAGGGGAT--ACAATTAGCGGAAGCTTTATTACCCGGATATTGTTATC------------------------------------------------------------------------TAATACCCTAAACTCCTCATTAAGTTC
droSim2 3l:23063218-23063391 + TGCTCCAAATTTAAAGATCTAACTAAATTTGCTAAGTTTAAATAAAGGGGAT--ATAATTGGTGGAAGCTTTATTACCCGGATATTGCTATCTGG---ATCAACATCTAACACATTGTTGTTGAAGTTTAAAACCTTAATTTGAGAAGATATTTCAGGAATTGCTAATGCCCTAAACTC------------
droSec2 scaffold_51:127484-127657 + TGCTCCAAATTTAAAGATCTAACTAAATTTGCTAAGTTTAAATAAAGGGGAT--ATAATTGGTGGAAGCTTTATTACCCGGATATTGCTATCTGG---ATCAACATGTAACGCATTGTTGTTGAAGTTTAAAACCTTAATTTGAGAAGATATTTCAGGAATTGCTAATGCCCTAAACTC------------
droYak3 v2_chrUn_2428:8739-8907 + TGCTCCAAATTTAGAGATCTAACTAAATTGGCTAAGTTTA----AAGGGGAT--ATAAGTGGGGGAAGCTTTATTACCCGGATATTGCT-TCCGG---ATCAACATCCAACAAATTGTTGTTCAAGTTTAAAACATTAATTTGAGAAGATATTTCAGGTAAAGCTAATGCCCTAAACTC------------
droEre2 scaffold_4784:23606921-23607089 - TCTTCGAAGTTTATAGTTATGACAAAATTTCTTTTGCTCT----TAGTGGAT--ATA-TAGGGGGGAATATTATTATCCCGATATTTCTATCCAG---ATAAAAATTTCGCACATTGTTGTTTATGCTTAAAACATAAATTTCAGTCGATATTTCGGGAATTGATAACGCCCTAAATTC------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGCTTCAAATTAAGCGACCTGACAATTTCGGCCAGTCCTT----CAGGCGAA--ACTAAAGGTGGAAGTTTAATGACCCGTACATTATTATCTCCTAAATCTGTACTTTCATCACTTTCATTAATGTTTAGAACATTTAATTGTGGATTAATTTCGGGCAATCCCAATACCCTAAATCT------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................TACTTTCATCACTTTCATTAATGTT...............................................................252177.003542611600770
.......................................................................................................TACTTTCATCACTTTCATTAATGTTT..............................................................26279.50159146200101
........................................................TAAAGGTGGAAGTTTAATGACCCGTAC............................................................................................................27155.00554810024
........................................................TAAAGGTGGAAGTTTAATGACCCGTA.............................................................................................................26148.00483710055
........................................................TAAAGGTGGAAGTTTAATGACCCG...............................................................................................................24132.00322900030
.......................................................................................................TACTTTCATCACTTTCATTAATGT................................................................24327.008161110063
........................................................TAAAGGTGGAAGTTTAATGACCCGT..............................................................................................................25122.00221800040
........................................................TAAAGGTGGAAGTTTAATGACCCGTACA...........................................................................................................28118.00181600020
........................................................................................................ACTTTCATCACTTTCATTAATGTT...............................................................24217.00343200020
........................................................TAAAGGTGGAAGTTTAATGACCC................................................................................................................23115.00155000100
.........TTAAGCGACCTGACAATTTCGGCCAG............................................................................................................................................................26112.00121200000
................................................................................................................................TAGAACATTTAATTGTGGATTAATT......................................25210.00201900010
........................................................................................................ACTTTCATCACTTTCATTAATGTTT..............................................................2529.00181800000
.........TTAAGCGACCTGACAATTTCGGCC..............................................................................................................................................................2417.007600010
.........TTAAGCGACCTGACAATTTCGGCCAGTCC.........................................................................................................................................................2916.006600000
.......................................................................................................TACTTTCATCACTTTCATTAATG.................................................................2336.00181520010
........................................................TAAAGGTGGAAGTTTAATGACC.................................................................................................................2225.5011510050
........................................................TAAAGGTGGAAGTTTAATGACCCGTACAT..........................................................................................................2915.005400010
...TTCAAATTAAGCGACCTGACAATTTC..................................................................................................................................................................2615.005500000
....TCAAATTAAGCGACCTGACAATTTCGGC...............................................................................................................................................................2815.005400010
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCA...............................2425.00101000000
...TTCAAATTAAGCGACCTGACAATT....................................................................................................................................................................2414.004100030
...TTCAAATTAAGCGACCTGACAATTT...................................................................................................................................................................2514.004300010
...TTCAAATTAAGCGACCTGACAATTTCG.................................................................................................................................................................2714.004200020
....TCAAATTAAGCGACCTGACAATTTCGGCC..............................................................................................................................................................2914.004100030
.....................................................................................TATTATCTCCTAAATCTGTACTTTCA................................................................................2614.004400000
.......................................................................................................................................TTTAATTGTGGATTAATTTCGGGCA...............................2523.507600001
.........TTAAGCGACCTGACAATTTCGGCCAGTC..........................................................................................................................................................2813.003200010
.............................................................................................................................................TGTGGATTAATTTCGGGCAATCCCAA........................2623.006600000
.........................................................AAAGGTGGAAGTTTAATGACCCGTAC............................................................................................................2613.003300000
.....................................................................................................TGTACTTTCATCACTTTCATTAATGT................................................................2633.009900000
......................................TT----CAGGCGAA--ACTAAAGGTGGAAGTT.........................................................................................................................2623.006500010
.........................................................AAAGGTGGAAGTTTAATGACCCG...............................................................................................................2313.003300000
.......................................................................................................TACTTTCATCACTTTCATTAATGTTTAG............................................................2822.505500000
.......................................................................................................TACTTTCATCACTTTCATTAATGTC...............................................................2532.337000070
.....................................................................................................TGTACTTTCATCACTTTCATTAATG.................................................................2532.337700000
.........................................................AAAGGTGGAAGTTTAATGACCCGT..............................................................................................................2412.002200000
.......................................................................................................TACTTTCATCACTTTCATTAATGTTTA.............................................................2722.004400000
..........TAAGCGACCTGACAATTTCGGCCAGTC..........................................................................................................................................................2712.002100010
....................................................................................................................................................TAATTTCGGGCAATCCCAATACCCT..................2522.004300010
........................................................................................................ACTTTCATCACTTTCATTAATGT................................................................2332.006600000
.........................................................................................................CTTTCATCACTTTCATTAATGTT...............................................................2322.004000040
....................................................................................................................................................TAATTTCGGGCAATCCCAATACCCTA.................2622.004300010
.......................................................................................................................................TTTAATTGTGGATTAATTTCGGGC................................2422.004210010
.....................................................................................................TGTACTTTCATCACTTTCATTAATGTT...............................................................2722.004300010
..........TAAGCGACCTGACAATTTCGGCCAGTCC.........................................................................................................................................................2812.002100010
....................................................................................................................................................TAATTTCGGGCAATCCCAATACCC...................2422.004300010
...TTCAAATTAAGCGACCTGACAATTTCGGC...............................................................................................................................................................2912.002200000
.....................................................................................TATTATCTCCTAAATCTGTACTTTC.................................................................................2512.002200000
...................................................................................................TCTGTACTTTCATCACTTTCATTAATG.................................................................2731.675500000
.............................................................................................................................................TGTGGATTAATTTCGGGCAATCCC..........................2421.503200010
.............................................................................................................................................TGTGGATTAATTTCGGGCAATCC...........................2321.503200010
............................................................................................................................................TTGTGGATTAATTTCGGGCAATCCCAA........................2721.503200010
.........................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCCCA.........................2921.503300000
...............................................................................................................................TTAGAACATTTAATTGTGGATTAATT......................................2621.503300000
...TTCAAATTAAGCGACCTGACAAT.....................................................................................................................................................................2321.503200010
..............................................................................................................ATCACTTTCATTAATGTTT..............................................................1921.503100020
...........................................................................................................TTCATCACTTTCATTAATGTTT..............................................................2221.503300000
......................................TT----CAGGCGAA--ACTAAAGGTGGAAGT..........................................................................................................................2521.503300000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCCC..........................2921.503300000
........................................................................................................ACTTTCATCACTTTCATTAATG.................................................................2231.334400000
..........TAAGCGACCTGACAATTTCGGCCAG............................................................................................................................................................2511.001100000
.......................................................................................................................................TTTAATTGTGGATTAATTTCGGGCAAT.............................2721.002200000
.........TTAAGCGACCTGACAATTTCGGCCAGT...........................................................................................................................................................2711.001100000
...............................................................................................................................................TGGATTAATTTCGGGCAATCCCAATACC....................2821.002200000
.........................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCCC..........................2821.002100010
...................................................................................................TCTGTACTTTCATCACTTTCATTAATGTT...............................................................2921.002200000
.........................................................................................................................................TAATTGTGGATTAATTTCGGGCAATCC...........................2721.002200000
.......................................................................................................................................TTTAATTGTGGATTAATTTCGGGCAA..............................2621.002200000
..........................................................AAGGTGGAAGTTTAATGACCCGTA.............................................................................................................2411.001100000
.......................................................................................................TACTTTCATCACTTTCATTAATGTTTAGA...........................................................2921.002200000
.........................................................AAAGGTGGAAGTTTAATGACCCGTA.............................................................................................................2511.001100000
..........................TTCGGCCAGTCCTT----CAGGCGAA--A........................................................................................................................................2311.001100000
....................................................................................................................................................TAATTTCGGGCAATCCCAATACC....................2321.002000020
....................................CCTT----CAGGCGAA--ACTAAAGGTG...............................................................................................................................2211.001100000
...............................................................................................................................................TGGATTAATTTCGGGCAATCCCAATACCC...................2921.002200000
..........TAAGCGACCTGACAATTTCGGCC..............................................................................................................................................................2311.001100000
................................................................................TACATTATTATCTCCTAAATCTGTACTT...................................................................................2811.001100000
.............................................................................................................................................TGTGGATTAATTTCGGGCAATCCCA.........................2521.002200000
........................................................TAAAGGTGGAAGTTTAATGACCCGC..............................................................................................................2511.001000010
TGCTTCAAATTAAGCGACCTGACAATT....................................................................................................................................................................2711.001000010
.........TTAAGCGACCTGACAATTTCGGCCA.............................................................................................................................................................2511.001100000
....................................CCTT----CAGGCGAA--ACTAAAGGTGGAAG...........................................................................................................................2611.001100000
...........AAGCGACCTGACAATTTCGGC...............................................................................................................................................................2111.001100000
..............................................................................................................ATCACTTTCATTAATGTT...............................................................1821.002100010
....TCAAATTAAGCGACCTGACAATTTCGG................................................................................................................................................................2711.001100000
.......AATTAAGCGACCTGACAATTTCGGCC..............................................................................................................................................................2611.001100000
..........................TTCGGCCAGTCCTT----CAGGCGAA--ACTAA....................................................................................................................................2711.001100000
............................................................................................................................................TTGTGGATTAATTTCGGGCAATCC...........................2421.002000020
.......................................................................................................TACTTTCATCACTTTCATT.....................................................................1930.672100010
......................................................................................................GTACTTTCATCACTTTCATTAATGT................................................................2530.672110000
...................................................................................................TCTGTACTTTCATCACTTTCATTAAT..................................................................2630.672200000
....................................................................................................CTGTACTTTCATCACTTTCATTAATGT................................................................2730.672200000
.......................................................................................................TACTTTCATCACTTTCATTAATGC................................................................2430.672000020
....................................................................................................CTGTACTTTCATCACTTTCATTAATG.................................................................2630.672200000
.................................................................................................................................................GATTAATTTCGGGCAATCCCAATACCC...................2720.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCC...........................2820.501100000
................................................................................................................................TAGAACATTTAATTGTGGATTAAT.......................................2420.501100000
......................................................ACTAAAGGTGGAAGTTTAATGACC.................................................................................................................2420.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGC..................................2120.501000010
...........................................................................................................TTCATCACTTTCATTAATGTT...............................................................2120.501000010
.......................................................................................................TACTTTCATCACTTTCATTAATGTTTG.............................................................2720.501100000
..........................................................................................................TTTCATCACTTTCATTAATGTTT..............................................................2320.501100000
...........................................................AGGTGGAAGTTTAATGACC.................................................................................................................1920.501000010
............................................................................................................................................TTGTGGATTAATTTCGGGC................................1920.501000001
.......................................................................................................TACTTTCATCACTTTCATTAATGTTTC.............................................................2720.501100000
.........................................................................................................................................TAATTGTGGATTAATTTCGGGCA...............................2320.501100000
...................................................................................................................................AACATTTAATTGTGGATTAATTTCGGGC................................2820.501100000
..........................................................................................................TTTCATCACTTTCATTAATGTTTAGAA..........................................................2720.501100000
............................................CAGGCGAA--ACTAAAGGTGGAA............................................................................................................................2120.501100000
............................................................................................................TCATCACTTTCATTAATGTTTAGAACA........................................................2720.501100000
.......................................................................................................TACTTTCATCACTTTCATTAATGTTC..............................................................2620.501100000
.........................................................AAAGGTGGAAGTTTAATGAC..................................................................................................................2020.501100000
............................................................................................................................................TTGTGGATTAATTTCGGGCAATCCCC.........................2620.501100000
......................................................................................................................................................ATTTCGGGCAATCCCAATACCCTA.................2420.501100000
..........................................................................................................TTTCATCACTTTCATTAATGTT...............................................................2220.501100000
......................................TT----CAGGCGAA--ACTAAAGGTGGAAG...........................................................................................................................2420.501000001
..........................................................................................................................................AATTGTGGATTAATTTCGGGC................................2120.501010000
...TTCAAATTAAGCGACCTGACA.......................................................................................................................................................................2120.501100000
............................................................................................................TCATCACTTTCATTAATGTT...............................................................2020.501000010
.........................................................................................................................................TAATTGTGGATTAATTTCGGG.................................2120.501000010
.........................................................................................................................................................TCGGGCAATCCCAATACCC...................1920.501000010
........................................................TAAAGGTGGAAGTTTAATG....................................................................................................................1920.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATT............................2720.501100000
TGCTTCAAATTAAGCGACCTGACAAT.....................................................................................................................................................................2620.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAATCCA..........................2920.501100000
........................................................................................................ACTTTCATCACTTTCATTAATGTTTAG............................................................2720.501100000
....................................................................................................................................................TAATTTCGGGCAATCCCAATACCCTAA................2720.501100000
.......................................................................................................................................................TTTCGGGCAATCCCAATACCCTAAATC.............2720.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAAT.............................2620.501000010
..............................................................................................................................TTTAGAACATTTAATTGTGGATTAATT......................................2720.501100000
........................................................................................................................................................TTCGGGCAATCCCAATACCCTAAATC.............2620.501100000
.........................................................................................................CTTTCATCACTTTCATTAATGTTT..............................................................2420.501100000
........................................................................................................................................TTAATTGTGGATTAATTTCGGGCAA..............................2520.501100000
.....................................................................................................................................................AATTTCGGGCAATCCCAATACCCTA.................2520.501000010
........................................................TAAAGGTGGAAGTTTAATGAC..................................................................................................................2120.501010000
.........................................................................................................................................TAATTGTGGATTAATTTCGGGCAATC............................2620.501100000
.............................................................................................................CATCACTTTCATTAATGTT...............................................................1920.501100000
TGCTTCAAATTAAGCGACCTGACAAC.....................................................................................................................................................................2620.501000010
........................................................................................................................................TTAATTGTGGATTAATTTCGGG.................................2220.501010000
...................................................................................................TCTGTACTTTCATCACTTTCATT.....................................................................2330.331100000
...........................................................................................................TTCATCACTTTCATTAATG.................................................................1930.331010000
......................................................................................................GTACTTTCATCACTTTCATTAATG.................................................................2430.331100000
...................................................................................................TCTGTACTTTCATCACTTTCATTAATGT................................................................2830.331100000
...................................................................................................TCTGTACTTTCATCACTTTCATTAA...................................................................2530.331000010
.......................................................................................................TACTTTCATCACTTTCATTAA...................................................................2130.331000010
.......................................................................................................TACTTTCATCACTTTCATTAAT..................................................................2230.331100000
.......................................................................................................TACTTTCATCACTTTCATC.....................................................................1930.331000010
.......................................................................................................TACTTTCATCACTTTCAT......................................................................1830.331100000
droVir3
TGCTTTAAATTAAGTGACCTGACTATATCTGCTAAGCTTT----CAGCTGAA--ACTATAGCTGTAAGTTTTATTAATCGGACATTGTTATCTTCTAAATCTAGATTCTCGTCATTTCCATTAATGTTTAAGACATTTAAATGAGGATTTATTTCTGGGAATCCTAATACGCGAAATCT------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................CCTGACTATATCTGCTAAGCTTT----CAGC...............................................................................................................................................2780.756000000000000000000000000012011001000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----...................................................................................................................................................2390.676000000000000000000001003000010010000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCTT........................................................................................................................................................2480.635000000000000000000000000010010300000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCTTT----...................................................................................................................................................2580.504000000000000000000000000001100011000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----CAGCT..............................................................................................................................................2880.383000000000000000000000000010000010000010000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----CA.................................................................................................................................................2580.383000000000000000000001000002000000000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCTTT----CAG................................................................................................................................................2870.292000000000000000000000000000010010000000000000000000000000000000
..........TAAGTGACCTGACTATATCTGCTAAGCT.........................................................................................................................................................2880.252000000000000000000000000100010000000000000000000000000000000000
...................................................................................................TCTAGATTCTCGTCATTTCCATTAATGT................................................................2880.252000000000000000000000000000000100000010000000000000000000000000
..........TAAGTGACCTGACTATATCTGCTAAGC..........................................................................................................................................................2780.252000000000000000000000000000010010000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCT.........................................................................................................................................................2380.252000000000000000000000000000010001000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----C..................................................................................................................................................2490.222000000000000000000000000001000000001000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCTTT----CAA................................................................................................................................................2870.141000000000000000000000000000000000001000000000000000000000000000
................ACCTGACTATATCTGCTAAGCTTT----CAGC...............................................................................................................................................2880.131000000000000000000000000000000000001000000000000000000000000000
...................TGACTATATCTGCTAAGCTTT----CAGC...............................................................................................................................................2580.131000000000000000000000000000100000000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----CAGCTC.............................................................................................................................................2980.131000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................CTCGTCATTTCCATTAATGTTTAAGAC.........................................................2780.131000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................TAGATTCTCGTCATTTCCATTAATGTT...............................................................2780.131000010000000000000000000000000000000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGC..........................................................................................................................................................2280.131000000000000000000000000000000010000000000000000000000000000000
...................TGACTATATCTGCTAAGCTTT----CAG................................................................................................................................................2480.131000000000000000000000000010000000000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----CAG................................................................................................................................................2680.131000000000000000000000000010000000000000000000000000000000000000
..............TGACCTGACTATATCTGCTAAGCTT........................................................................................................................................................2580.131000000000000000000000000000000001000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTTT----CAGA...............................................................................................................................................2780.131000000000000000000000000000000000001000000000000000000000000000
.........TTAAGTGACCTGACTATATCTGCTAAGC..........................................................................................................................................................2880.131000000000000000000000000000000010000000000000000000000000000000
...............GACCTGACTATATCTGCTAAGCTTT----C..................................................................................................................................................2680.131000010000000000000000000000000000000000000000000000000000000000
................ACCTGACTATATCTGCTAAGCTTT----CAGCT..............................................................................................................................................2980.131000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................TTCTCGTCATTTCCATTAATGTTTAAGA..........................................................2880.131000000000000000000000000000010000000000000000000000000000000000
.................CCTGACTATATCTGCTAAGCTT........................................................................................................................................................2290.111000000000000000000000000000000000001000000000000000000000000000
......................CTATATCTGCTAAGCTTT----CAGCTGA............................................................................................................................................2590.111000000000000000000000000000100000000000000000000000000000000000
................ACCTGACTATATCTGCTAAGCTTT----...................................................................................................................................................2490.111000000000000000000000000010000000000000000000000000000000000000
...................................................................................................TCTAGATTCTCGTCATTTCCATTAATG.................................................................2790.111001000000000000000000000000000000000000000000000000000000000000
...............GACCTGACTATATCTGCTA.............................................................................................................................................................1990.111000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................TAGATTCTCGTCATTTCCATTAATG.................................................................2590.111000000000000000000000000000000010000000000000000000000000000000
.........................TATCTGCTAAGCTTT----CAGCTGAA--C........................................................................................................................................24100.101000000000000000000000000000010000000000000000000000000000000000
.........................TATCTGCTAAGCTTT----CAGCTC.............................................................................................................................................21100.101000000000000000000000000000000010000000000000000000000000000000
........................ATATCTGCTAAGCTTT----CAGC...............................................................................................................................................20100.101000000000000000000000000000010000000000000000000000000000000000
...................................................................................................TCTAGATTCTCGTCATTTCCATTAAT..................................................................26100.101000000000000000000000000000000000000000100000000000000000000000
.........................TATCTGCTAAGCTTT----CAGCTGAA--.........................................................................................................................................23100.101000000000000000000000000001000000000000000000000000000000000000
..........................ATCTGCTAAGCTTT----CAGCTGAA--ACTA.....................................................................................................................................26100.101000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................TCATTTCCATTAATGTTTAAGACATT......................................................26110.091001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTTCCATTAATGTTTAAGACATTTAAAT.................................................28140.071000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................TTTCCATTAATGTTTAAGACATTT.....................................................24140.071001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAATGTTTAAGACATTTAAATGAGGAT...........................................27150.071000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................AGACATTTAAATGAGGATTTATT......................................23160.061000100000000000000000000000000000000000000000000000000000000000
droGri2
TGCCTTAAATTGCGAGATCTAATAATATTTCATAAGTTCT----CAGTTGAA--AATAAAGCTGGTAATTTAATTAGACGAACATTATTATCTCCTAAGTTTTCATCTTTATTATTCCCATCAATGTTTAAAACATTTAATTGAGAATTTATTTCTGGAAA------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGCCTAAAATTAAGAGACCTAACAACACTTGCCAGATTTT----CAGGCGAA--ATTATTGGCGGAAGTTTAATAACTCGGATATCATTGTCTGT---ATCCTGTGGTTGGTCATTGCCATTTAAATTTAACAGATTGAGCTGAGAGCTAATTTCAGGAAATGCTAAAACTCTAAACTC------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATT......................................2516619.13990611138318842821
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTT.....................................261673.81118101044010352
...............................................................................................................................TTAACAGATTGAGCTGAGAGCTAATT......................................261653.06849061177701
................................................................................................................................TAACAGATTGAGCTGAGAGCTAAT.......................................241633.69539266124590
.................................................................................................................................AACAGATTGAGCTGAGAGCTAATT......................................241614.5023208331460
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTC...................241811.2820311811830
.........................................................................TAACTCGGATATCATTGTCTGT---ATCC.........................................................................................26159.9314904301051
...................................................................................................................TGCCATTTAAATTTAACAGATTGAGC..................................................26159.3314013501040
..................................................................................TATCATTGTCTGT---ATCCTGTGGTTGG................................................................................26159.271390132070
..........................................................................................................................TAAATTTAACAGATTGAGCTGAGAGC...........................................26158.731310592700
..............................................................................................................................TTTAACAGATTGAGCTGAGAGCTAATT......................................27167.5612101111090
...............................................................................................................................TTAACAGATTGAGCTGAGAGCTAAT.......................................25166.251001101880
...............................................................................................................................TTAACAGATTGAGCTGAGAGCTAATTT.....................................27165.3886070790
.........................................................................................................................TTAAATTTAACAGATTGAGCTGAGAGC...........................................27154.80720481230
...................TAACAACACTTGCCAGATTTT----CAGG...............................................................................................................................................25153.9359058010
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTCA.............................................................................26153.6054047160
..............................................................................................................................TTTAACAGATTGAGCTGAGAGCTAAT.......................................26163.3854160470
........................................................................................................................TTTAAATTTAACAGATTGAGCTGAGAGC...........................................28153.27490341140
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTC..............................................................................25153.27490290200
................................................................................................................................TAACAGATTGAGCTGAGAGCTAA........................................23163.1350046400
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCATTG..........................................................................26162.6943041020
...................................................................................................................TGCCATTTAAATTTAACAGATTGAGCT.................................................27152.6740002380
........................................................................................................................................................TTCAGGAAATGCTAAAACTCTAAAC..............25162.4439050340
..................................................................................TATCATTGTCTGT---ATCCTGTGGTTG.................................................................................25152.3335030050
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCATTGC.........................................................................27161.88300110190
...................TAACAACACTTGCCAGATTTT----CAGGC..............................................................................................................................................26151.8728028000
..........TAAGAGACCTAACAACACTTGCCAGAT..........................................................................................................................................................27141.79250140110
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGC.........................................................................25161.75280170110
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCA.............................................................................23161.7528027010
...................................................................................ATCATTGTCTGT---ATCCTGTGGTTGG................................................................................25151.7326025010
..........TAAGAGACCTAACAACACTTGCCAGATT.........................................................................................................................................................28141.7124016080
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCAT............................................................................24161.6927025020
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTCTAAAC..............29161.6927025110
....................................................................TTTAATAACTCGGATATCATTGTC...................................................................................................24151.6024200220
.........................................................................................................................................................TCAGGAAATGCTAAAACTCTAAACTC------------26161.56250100150
...........................................................................................................................AAATTTAACAGATTGAGCTGAGAGC...........................................25161.56250141100
..................................................................................................................................ACAGATTGAGCTGAGAGCTAATT......................................23161.5024016080
......................................................................TAATAACTCGGATATCATTGTCTGT---ATCC.........................................................................................29151.4722015070
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGCCATT.....................................................................29161.3822220000
........ATTAAGAGACCTAACAACACTTGC...............................................................................................................................................................24161.3822022000
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTCA.............................................................................24151.3320090110
.............................................................................................................................................TGAGAGCTAATTTCAGGAAATGCT..........................24161.2520011171
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGCCA.......................................................................27161.1919013060
.......................................................................................................................................................TTTCAGGAAATGCTAAAACTCTAAAC..............26161.1919030160
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGT...............................................................................24151.1317012050
.........................................................................TAACTCGGATATCATTGTCTGT---ATCCTG.......................................................................................28151.0716016000
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTC..............................................................................23151.0015020130
..............................................................................................................................TTTAACAGATTGAGCTGAGAGCTAA........................................25161.0016030130
......................................................................TAATAACTCGGATATCATTGTCTGT---A............................................................................................26151.001509060
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTCAT............................................................................27151.0015014100
..........TAAGAGACCTAACAACACTTGCCAGA...........................................................................................................................................................26141.0014010040
.................................................................................................................................AACAGATTGAGCTGAGAGCTAATTT.....................................25160.9415040110
.................................................................................................................................AACAGATTGAGCTGAGAGCTAAT.......................................23160.9415011040
................................................................................................................................TAACAGATTGAGCTGAGAGC...........................................20160.9415050100
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATC......................................25160.8814021110
........ATTAAGAGACCTAACAACACTTGCCA.............................................................................................................................................................26140.8612012000
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGG................................................................................23150.8012012000
..................................................................................................................TTGCCATTTAAATTTAACAGATTGAGC..................................................27150.801204080
...............................................................................................................................TTAACAGATTGAGCTGAGAGCTAA........................................24160.7512001110
......................................................................TAATAACTCGGATATCATTGTCTG.................................................................................................24150.7311011000
.......................................................................AATAACTCGGATATCATTGTCTGT---ATCC.........................................................................................28150.731105060
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTG..........................................................................24160.6911010010
.....................................................................................................................................................AATTTCAGGAAATGCTAAAACTCTAAAC..............28160.691103080
........................................................................................................................................................TTCAGGAAATGCTAAAACTCTAAACTC------------27160.691103080
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCATT...........................................................................25160.691109020
....................................................................................TCATTGTCTGT---ATCCTGTGGTTGG................................................................................24150.671009010
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTCAT............................................................................25150.671009010
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTCT..................25180.671209030
....................................................................TTTAATAACTCGGATATCATTGTCTG.................................................................................................26150.671006040
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTCTAAA...............28170.6511011000
.............................................................................................................................ATTTAACAGATTGAGCTGAGAGCTAAT.......................................27160.631001090
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTTT....................................27160.631001360
..........................................................................................................................TAAATTTAACAGATTGAGCTGAGAG............................................25150.60905130
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTCATTG..........................................................................27150.60904050
........................................................................................................................................TGAGCTGAGAGCTAATTTCAGGAAATGC...........................28160.56901170
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGCCAT......................................................................28160.56909000
..............................................................................................................................TTTAACAGATTGAGCTGAGAGCTAATTT.....................................28160.56902160
......................................................................TAATAACTCGGATATCATTGTCTGT---.............................................................................................25150.53805030
.........................................................................TAACTCGGATATCATTGTCTGT---ATC..........................................................................................25150.53805030
......................................................................................ATTGTCTGT---ATCCTGTGGTTGGTCA.............................................................................25150.53808000
..............................................................................................T---ATCCTGTGGTTGGTCATTGCCATT.....................................................................25170.53907020
........ATTAAGAGACCTAACAACACTTGCCAG............................................................................................................................................................27140.50707000
..................................................................................TATCATTGTCTGT---ATCCTGTGGT...................................................................................23160.50806020
.....................................................................................................................................GATTGAGCTGAGAGCTAATT......................................20160.50801160
........................................................................ATAACTCGGATATCATTGTCTGT---ATCC.........................................................................................27150.47702050
....................................................................................TCATTGTCTGT---ATCCTGTGGTTGGTC..............................................................................26150.47704030
..........................................................................AACTCGGATATCATTGTCTGT---ATCC.........................................................................................25150.47706010
.........................................................................................................................................................TCAGGAAATGCTAAAACTCTAAAC..............24160.44702050
........................................................................................TGTCTGT---ATCCTGTGGTTGGTC..............................................................................22160.44706010
..........TAAGAGACCTAACAACACTTGCCAG............................................................................................................................................................25140.43614010
.........................................................................................................................TTAAATTTAACAGATTGAGCTGAGAG............................................26150.40605010
..................................................................................TATCATTGTCTGT---ATCCTGTGGTTGGT...............................................................................27150.40601050
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTCTA.................26180.39706010
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTTC....................................27160.38604020
..................................................................................TATCATTGTCTGT---ATCCTGTGG....................................................................................22160.38606000
..................................................................................TATCATTGTCTGT---ATCCTGTGGTT..................................................................................24160.38602040
...........AAGAGACCTAACAACACTTGCCAGAT..........................................................................................................................................................26140.36504010
............................................................................................................TGGTCATTGCCATTTAAATTTAACAGAT.......................................................28140.36502030
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTCTAA................27180.33606000
.....................................................................TTAATAACTCGGATATCATTGTCTG.................................................................................................25150.33503020
..........................................................................................................................TAAATTTAACAGATTGAGCTGAGAGCT..........................................27150.33505000
...................................................................................................................TGCCATTTAAATTTAACAGATTGAG...................................................25150.33503020
.........................................................................................GTCTGT---ATCCTGTGGTTGGTCATTG..........................................................................25160.31505000
...............................................................................................................................TTAACAGATTGAGCTGAGAGC...........................................21160.31502030
..................................................................................................................................ACAGATTGAGCTGAGAGCTAATTT.....................................24160.31503110
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGCC........................................................................26160.31504010
........ATTAAGAGACCTAACAACACTTGCCAGA...........................................................................................................................................................28140.29404000
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTCTA............................................................................27150.27402020
......................................................................TAATAACTCGGATATCATTGTCTGT---AT...........................................................................................27150.27402020
....................................................................................................................GCCATTTAAATTTAACAGATTGAGC..................................................25150.27403010
......................................................................TAATAACTCGGATATCATTGTC...................................................................................................22150.27401030
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTCATTGC.........................................................................28150.27402020
.......................................................................AATAACTCGGATATCATTGTCTGT---A............................................................................................25150.27404000
....................................................................................TCATTGTCTGT---ATCCTGTGGTTGGTCAT............................................................................28150.27404000
......................................................................................ATTGTCTGT---ATCCTGTGGTTGGTC..............................................................................24150.27404000
........................................................................................TGTCTGT---ATCCTGTGGTTGGT...............................................................................21160.25403010
............................................................................................TGT---ATCCTGTGGTTGGTCATTGCCATT.....................................................................27160.25403010
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATA......................................25160.25401030
...................................................................................................................................................CTAATTTCAGGAAATGCTAAAACTC...................25160.25400040
........................................................................................................................................TGAGCTGAGAGCTAATTTCAGGAAA..............................25160.25401030
................................................................................................................................TAACAGATTGAGCTGAGAGCT..........................................21160.25401030
........................................................................................TGTCTGT---ATCCTGTGGTTGGTCATTGCCA.......................................................................29160.25404000
.........TTAAGAGACCTAACAACACTTGCCAGAT..........................................................................................................................................................28140.21301020
..................................GATTTT----CAGGCGAA--ATTATTGGCGG..............................................................................................................................25140.21301020
...........AAGAGACCTAACAACACTTGCCA.............................................................................................................................................................23140.21303000
........ATTAAGAGACCTAACAACACTTGCC..............................................................................................................................................................25140.21303000
.........TTAAGAGACCTAACAACACTTGCCA.............................................................................................................................................................25140.21302010
...........AAGAGACCTAACAACACTTGCCAGATT.........................................................................................................................................................27140.21303000
.....................................................................................................................CCATTTAAATTTAACAGATTGAGCT.................................................25150.20300030
.......................................................................................TTGTCTGT---ATCCTGTGGTTGGTCATT...........................................................................26150.20301020
...................TAACAACACTTGCCAGATTTT----CAG................................................................................................................................................24150.20303000
....................................................................................TCATTGTCTGT---ATCCTGTGGTTGGTCA.............................................................................27150.20301020
......................................................................TAATAACTCGGATATCATTGTCTGT---ATC..........................................................................................28150.20301020
..............AGACCTAACAACACTTGCCAGATT.........................................................................................................................................................24150.20303000
...................................................................................ATCATTGTCTGT---ATCCTGTGGTTGGT...............................................................................26150.20302010
....................................................................TTTAATAACTCGGATATCATTGTCT..................................................................................................25150.20300030
....................................................................................TCATTGTCTGT---ATCCTGTGGTTG.................................................................................23150.20303000
................................................................................................................................TAACAGATTGAGCTGAGAGCTA.........................................22160.19300030
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTC.....................................26160.19300030
............................................................................................................................AATTTAACAGATTGAGCTGAGAGCTAAT.......................................28160.19300030
.................................................................................................................................AACAGATTGAGCTGAGAGCTAATTTCAG..................................28160.19301200
..........................................................................................................................................................CAGGAAATGCTAAAACTCTAAACTC------------25160.19300030
...................................................................................................TCCTGTGGTTGGTCATTGCCATTTAAATT...............................................................29160.19303000
......................................................................................................TGTGGTTGGTCATTGCCATTTAAATT...............................................................26160.19303000
.................................................................................................................................AACAGATTGAGCTGAGAGCT..........................................20160.19300030
........................................................................................TGTCTGT---ATCCTGTGGTTGG................................................................................20160.19302010
.........................................................................................GTCTGT---ATCCTGTGGTTGGTCA.............................................................................22160.19303000
....................................................................................................................................AGATTGAGCTGAGAGCTAATT......................................21160.19300030
............................................................................................TGT---ATCCTGTGGTTGGTCATTGCCA.......................................................................25160.19301020
..................................................................................................ATCCTGTGGTTGGTCATTGCCATT.....................................................................24170.18302010
.....................................................................................................................................................AATTTCAGGAAATGCTAAAACTC...................23180.17303000
.........TTAAGAGACCTAACAACACTTGCCAGA...........................................................................................................................................................27140.14202000
..........TAAGAGACCTAACAACACTTGCCAGATTT........................................................................................................................................................29140.14202000
........................................................................................................................TTTAAATTTAACAGATTGAGCTGAGA.............................................26150.13201010
..........................................................................AACTCGGATATCATTGTCTGT---ATCCTG.......................................................................................27150.13202000
................ACCTAACAACACTTGCCAGATTTT----CAGG...............................................................................................................................................28150.13202000
......................................................................TAATAACTCGGATATCATTGT....................................................................................................21150.13200020
.............GAGACCTAACAACACTTGCCAGATTT........................................................................................................................................................26150.13202000
...................................................................................ATCATTGTCTGT---ATCCTGTGGTTG.................................................................................24150.13201010
..................................................................................TATCATTGTCTGT---ATCCTGTGGTTGGTC..............................................................................28150.13201010
....................................................................................TCATTGTCTGT---ATCCTGTGGTTGGT...............................................................................25150.13201010
...................................................................................ATCATTGTCTGT---ATCCTGTGGTTGGTC..............................................................................27150.13200020
.......................................................................AATAACTCGGATATCATTGTCTG.................................................................................................23150.13202000
.....................................................................TTAATAACTCGGATATCATTGTCTGT---A............................................................................................27150.13200020
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTCT.............................................................................26150.13201010
....................AACAACACTTGCCAGATTTT----CAGG...............................................................................................................................................24150.13202000
...............................................................................................................TCATTGCCATTTAAATTTAACAGATTG.....................................................27150.13201010
....................................................................TTTAATAACTCGGATATCATTG.....................................................................................................22150.13201010
.............GAGACCTAACAACACTTGCCAGATT.........................................................................................................................................................25150.13202000
.............................................................................................................................................TGAGAGCTAATTTCAGGAAATGCTAA........................26160.13200020
..........................................................................................TCTGT---ATCCTGTGGTTGGTCATTGCCATA.....................................................................29160.13202000
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTA.....................................26160.13200020
.........................................................................................GTCTGT---ATCCTGTGGTTGGTCAT............................................................................23160.13202000
.................................................................................................................................AACAGATTGAGCTGAGAGCTAATTTCA...................................27160.13202000
............................................................................................................................AATTTAACAGATTGAGCTGAGAGC...........................................24160.13202000
......................................................................................................................................................ATTTCAGGAAATGCTAAAACTCTAAAC..............27160.13200020
...........................................................................................................................AAATTTAACAGATTGAGCTGAGAG............................................24160.13202000
................................................................................................................................TAACAGATTGAGCTGAGAGCTAATTTAT...................................28160.13201010
...................................................................................................TCCTGTGGTTGGTCATTGCCATTTAAAT................................................................28160.13201010
.............................................................................................................................ATTTAACAGATTGAGCTGAGAGCTAATT......................................28160.13200020
...........................................................................................CTGT---ATCCTGTGGTTGGTCATTGC.........................................................................24160.13202000
.........................................................................................GTCTGT---ATCCTGTGGTTGGTC..............................................................................21160.13202000
................................................................................................................................TAACAGATTGAGCTGAGAG............................................19160.13200020
.............................................................................................GT---ATCCTGTGGTTGGTCATTGCCAT......................................................................25160.13201010
.........................................................................................................................................................TCAGGAAATGCTAAAACTCTAAACT.............25160.13202000
........ATTAAGAGACCTAACAACACT..................................................................................................................................................................21160.13202000
...................................................................................................................................CAGATTGAGCTGAGAGCTAATTTCAG..................................26160.13200020
...............................................................................................................................TTAACAGATTGAGCTGAGAGCT..........................................22160.13200020
...................................................................................ATCATTGTCTGT---ATCCTG.......................................................................................18160.13201010
.................................................................................................................................AACAGATTGAGCTGAGAGCTAA........................................22160.13202000
...........................................................................................................................................................AGGAAATGCTAAAACTCTAAACTC------------24160.13202000
.........................................................................................................................................GAGCTGAGAGCTAATTTCAGGAAATGC...........................27160.13201010
...............................................................................................................................TTAACAGATTGAGCTGAGA.............................................19160.13202000
..........TAAGAGACCTAACAACACTTGC...............................................................................................................................................................22160.13202000
.................................................................................................................................AACAGATTGAGCTGAGAGCTA.........................................21160.13201010
..............................................................................................T---ATCCTGTGGTTGGTCATTGCCAT......................................................................24170.12202000
..........................ACTTGCCAGATTTT----CAGG...............................................................................................................................................18170.12202000
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTA...................24180.11200020
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACT....................23180.11202000
.......................................................................................................................................................TTTCAGGAAATGCTAAAACTC...................21180.11200020
....................................................................................................................................................TAATTTCAGGAAATGCTAAAACTT...................24190.11200020
.......................AACACTTGCCAGATTTT----CAGGCGAA--AT.......................................................................................................................................27130.08101000
................................CAGATTTT----CAGGCGAA--ATTATTGG.................................................................................................................................24130.08101000
...................TAACAACACTTGCCAGATTTT----CAGGCG.............................................................................................................................................27140.07101000
.........TTAAGAGACCTAACAACACTTGCC..............................................................................................................................................................24140.07101000
..........TAAGAGACCTAACAACACTTGCC..............................................................................................................................................................23140.07100010
.........TTAAGAGACCTAACAACACTTGCCAGATT.........................................................................................................................................................29140.07101000
..................................................................AGTTTAATAACTCGGATATCATTGTC...................................................................................................26140.07100010
............AGAGACCTAACAACACTTGCCAGATTT........................................................................................................................................................27140.07101000
........ATTAAGAGACCTAACAACACTTGCCAGAT..........................................................................................................................................................29140.07101000
..........TAAGAGACCTAACAACACTTGCCA.............................................................................................................................................................24140.07101000
........ATTAAGAGACCTAACAACACTTGCCAA............................................................................................................................................................27140.07101000
.....................................TTT----CAGGCGAA--ATTATTGGCGG..............................................................................................................................22140.07101000
....................AACAACACTTGCCAGATTTT----CAGGCGA............................................................................................................................................27140.07101000
.....................................................................................CATTGTCTGT---ATCCTGTGGTTGGTG..............................................................................25150.07100010
dp5
TGCTTCAAATTAAGCGATCTAATCAAATTAGCAAAAATAT----TAAGGGAA--ACAATAGGAGGAAGCTTAATTAATCGAATACTTCTATCTTG---ATCCGCTGC------CTGGTCATTCAAGTTCAAAACATTTATCTGGGAACTTATTTCTGGAATCGCTAA-GCCATAAACTC------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACT..........................................28789.4362601924151001890
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAC...........................................27754.713830183570200116250
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGA.............................................25749.0034302199030390190
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................261228.923470243514102810100
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAA............................................26726.29184012818030619100
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................251224.672960250120001410100
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................271221.3325602222000012200
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACC..........................................28714.57102011001000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAA............................................................................................................................24129.5811509520105570
.....................................TAT----TAAGGGAA--ACAATAGGAGG..............................................................................................................................22127.509007400009520
.....................................TAT----TAAGGGAA--ACAATAGGAGGA.............................................................................................................................23127.008408010002010
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGG..............................................2476.144303820000300
.....................................TAT----TAAGGGAA--ACAATAGGAG...............................................................................................................................21124.505404610104020
......................................................................TAATTAATCGAATACTTCTATCTTG---A............................................................................................26103.8038081000011180
.........................................................................................................................TCAAGTTCAAAACATTTATCTGG...............................................2373.292301410000440
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGC.......................................................................................2792.892602420000000
.....................................TAT----TAAGGGAA--ACAATAGGA................................................................................................................................20122.753303100010010
......................................................................TAATTAATCGAATACTTCTATCT..................................................................................................23102.302301220000180
..........................................................................................................................CAAGTTCAAAACATTTATCTGGGA.............................................2472.291601600000000
......................................AT----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................25122.082502410000000
..........................................................................................................................CAAGTTCAAAACATTTATCTGGGAACT..........................................2772.001401220000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAA...........................................2771.861301300000000
......................................AT----TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................24121.581901900000000
......................................AT----TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................26121.421701610000000
.....................................TAT----TAAGGGAA--ACAATAGG.................................................................................................................................19121.25150900002040
...............................................................................................................................TCAAAACATTTATCTGGGAACTTATT......................................26111.18130100000840
..........................................................................................................................CAAGTTCAAAACATTTATCTGGGAAC...........................................2671.1480800000000
.........................................................................................................................................................TCTGGAATCGCTAA-GCCATAAACTC------------2511.0010100000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAA...........................................................................................................................25120.921101000001000
.........................................................................................................................TCAAGTTCAAAACATTTATC..................................................2070.8660060000000
......................................AT----TAAGGGAA--ACAATAGGAGGA.............................................................................................................................22120.831001000000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCTT........................................................................................................................28120.83100900001000
......................................AT----TAAGGGAA--ACAATAGGAGGAA............................................................................................................................23120.83100900000100
............................................TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................24120.83100710101000
..........................................................................TAATCGAATACTTCTATCTTG---ATCC.........................................................................................25100.8080800000000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCG........................................................................................26100.8080610000010
..................................................................................................................TGGTCATTCAAGTTCAAAACATTTATC..................................................2770.7150200000030
.............................................................................................................................................TGGGAACTTATTTCTGGAATCGCTA.........................25100.7070000003310
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCA......................................................................................2890.6760200000130
..........................................................................................................................CAAGTTCAAAACATTTATCTGGGAA............................................2570.5740400000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACA..........................................2870.5740400000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCC.........................................................................................................................27120.5060060000000
...................................................................................................TCCGCTGC------CTGGTCATTCAAGTTCA.............................................................2560.5030300000000
..................................................................................TACTTCTATCTTG---ATCCGCTG.....................................................................................21100.5050500000000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CT............................................................................24100.5050400000100
........................................................................................................TGC------CTGGTCATTCAAGTTCAAAACATT......................................................2760.5030000000300
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGA..........................................................................................................................26120.5060510000000
........................................................................................................................TTCAAGTTCAAAACATTTATCTGGGAAC...........................................2870.4330300000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGT..........................................................................................................................26120.4250410000000
.....................................................................................TTCTATCTTG---ATCCGCTGC------CTGG..........................................................................23100.4040400000000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------..............................................................................22100.4040400000000
..........................................................................TAATCGAATACTTCTATCTTG---ATC..........................................................................................24100.4040110000020
..................................................................................................................TGGTCATTCAAGTTCAAAACAT.......................................................2280.3830000000300
.............................................................................................................................................TGGGAACTTATTTCTGGAATCGCT..........................24110.3640100000120
...................................................................................................TCCGCTGC------CTGGTCATTCAAGTT...............................................................2360.3320200000000
....................................ATAT----TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................26120.3340100000210
.............................................................................................TG---ATCCGCTGC------CTGGTCATTCAAGT................................................................2560.3320200000000
.......................................T----TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................25120.3340300001000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CTG...........................................................................25100.3030300000000
TGCTTCAAATTAAGCGATCTAATCAAAT...................................................................................................................................................................28100.3030000000030
..................................................................................TACTTCTATCTTG---ATCCGCTGC------C.............................................................................23100.3030300000000
......................................................................................TCTATCTTG---ATCCGCTGC------CT............................................................................20100.3030300000000
.........................................................................................................................TCAAGTTCAAAACATTTATCT.................................................2170.2920200000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAC............................................2670.2920020000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACTT.........................................2970.2920200000000
........................................................................................................................TTCAAGTTCAAAACATTTATCTGGGA.............................................2670.2920200000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAAA..........................................2870.2920100001000
.............................................................................................................................................TGGGAACTTATTTCTGGAATCGC...........................23110.2730200100000
............AGCGATCTAATCAAATTAGCAA.............................................................................................................................................................2240.2510100000000
......................................AT----TAAGGGAA--ACAATAGGA................................................................................................................................19120.2530300000000
............................................TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................23120.2530200010000
......................................AT----TAAGGGAA--ACAATAGGAGG..............................................................................................................................21120.2530300000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCA.........................................................................................................................27120.2530300000000
.......................................T----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................24120.2530210000000
.........................................................................TTAATCGAATACTTCTATCTTG---ATCCGC.......................................................................................2890.2220200000000
................................................................................AATACTTCTATCTTG---ATCCGCTGC------..............................................................................2490.2220200000000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCTGC------..............................................................................2790.2220200000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGT.........................................................................23100.2020200000000
..........................................................TAGGAGGAAGCTTAATTAATCGAA.............................................................................................................24100.2020100000010
TGCTTCAAATTAAGCGATCTAATCAA.....................................................................................................................................................................26100.2020100000010
..........................................................................................TCTTG---ATCCGCTGC------CTGGTC........................................................................20100.2020100000010
..........................................................TAGGAGGAAGCTTAATTAATCGAATAC..........................................................................................................27100.2020000000020
......................................................................................TCTATCTTG---ATCCGCTGC------CTGG..........................................................................22100.2020200000000
........................................................................................TATCTTG---ATCCGCTGC------CTGG..........................................................................20100.2020200000000
.....................................................................................TTCTATCTTG---ATCCGCTGC------CTG...........................................................................22100.2020200000000
..........................................................TAGGAGGAAGCTTAATTAATCGAAT............................................................................................................25100.2020000000200
..................................................................................................................................AAACATTTATCTGGGAACTT.........................................20110.1820000000020
..............................................................................................................................TTCAAAACATTTATCTGGGAA............................................21110.1820200000000
...............................................................................................................................TCAAAACATTTATCTGGGAACTTAT.......................................25110.1820100000100
...............................................................................................................................TCAAAACATTTATCTGGGAAC...........................................21110.1820000001010
...................................................................................................................................AACATTTATCTGGGAACTTATT......................................22110.1820100000100
TGCTTCAAATTAAGCGATCTAATC.......................................................................................................................................................................24110.1820000000020
.......................................................................................................CTGC------CTGGTCATTCAAGTTCAAAACAT.......................................................2760.1710100000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAC............................................................................................................................24120.1720200000000
......................................AT----TAAGGGAA--ACAATAGG.................................................................................................................................18120.1720200000000
.......................................T----TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................23120.1720200000000
.............................................AAGGGAA--ACAATAGGAGGAAG...........................................................................................................................21120.1720200000000
.....................................TAT----TAAGGGAA--ACAATAGGAGA..............................................................................................................................22120.1720200000000
......................................AT----TAAGGGAA--ACAATAGGAG...............................................................................................................................20120.1720200000000
............................................TAAGGGAA--ACAATAGGAGG..............................................................................................................................19120.1720000002000
.............................................................................................TG---ATCCGCTGC------CTGGTCATTCAAGTT...............................................................2660.1710100000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCTA........................................................................................................................28120.1720200000000
.....................................TAT----TAAGGGAA--ACAATAGGAA...............................................................................................................................21120.1720200000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACTA.........................................2970.1410100000000
..........................................................................................................................CAAGTTCAAAACATTTATCTGGA..............................................2370.1410100000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAG............................................2670.1411000000000
..........................................................................................................................CAAGTTCAAAACATTTATCTGGG..............................................2370.1410100000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAAAA.........................................2970.1410100000000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACTG.........................................2970.1410100000000
........................................................................................................................TTCAAGTTCAAAACATTTATCTGGGAACT..........................................2970.1410010000000
............................................................................ATCGAATACTTCTATCTTG---ATCCGCT......................................................................................2680.1310100000000
...........................................................................AATCGAATACTTCTATCTTG---ATCCGCTG.....................................................................................2880.1310100000000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCT......................................................................................2880.1310100000000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCTG.....................................................................................2980.1310100000000
...........................................................................AATCGAATACTTCTATCTTG---ATCCGC.......................................................................................2690.1110100000000
............................................................................ATCGAATACTTCTATCTTG---ATCCGC.......................................................................................2590.1110100000000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCTG.....................................................................................2690.1110100000000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCAA.....................................................................................2990.1110100000000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCTT.....................................................................................2990.1110100000000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCTA.....................................................................................2690.1110100000000
............................................................................................................................AGTTCAAAACATTTATCTGGGAACT..........................................25100.1010100000000
.................................................................................ATACTTCTATCTTG---ATCCGCTG.....................................................................................22100.1010100000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGTCA.......................................................................25100.1010100000000
.............................................................................TCGAATACTTCTATCTTG---ATCCGC.......................................................................................24100.1010100000000
......................................................................TAATTAATCGAATACTTCTATCTTG---.............................................................................................25100.1010100000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGTCATA.....................................................................27100.1010100000000
...................................................................................ACTTCTATCTTG---ATCCGCTG.....................................................................................20100.1010100000000
...........................................................................................................................AAGTTCAAAACATTTATCTGGGAACT..........................................26100.1010100000000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CTGG..........................................................................26100.1010100000000
........................................................................................TATCTTG---ATCCGCTGC------CTGGTCAT......................................................................24100.1010100000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGTT........................................................................24100.1010100000000
........................................................................................TATCTTG---ATCCGCTGC------CTGGTCA.......................................................................23100.1010100000000
.......................................................................................CTATCTTG---ATCCGCTGC------CTG...........................................................................20100.1010100000000
........................................................................................TATCTTG---ATCCGCTGC------CTGGTCATT.....................................................................25100.1010100000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTG...........................................................................21100.1010100000000
.....................................................................................TTCTATCTTG---ATCCGCTGC------C.............................................................................20100.1010000100000
...........................................................................................................................AAGTTCAAAACATTTATCTGGGA.............................................23100.1010100000000
......................................................................TAATTAATCGAATACTTCTATCTA.................................................................................................24100.1010100000000
.............................................................................................................................GTTCAAAACATTTATCTGGGA.............................................21100.1010100000000
.......................................................................AATTAATCGAATACTTCTATCTTG---.............................................................................................24100.1010100000000
..........................................................................................TCTTG---ATCCGCTGC------CTGGTCA.......................................................................21100.1010100000000
..........................................................................................TCTTG---ATCCGCTGC------CTGGTCATT.....................................................................23100.1010100000000
......................................................................TAATTAATCGAATACTTCTATC...................................................................................................22100.1010100000000
......................................................................TAATTAATCGAATACTTCTATCTTG---ATCC.........................................................................................29100.1010100000000
....................................................................................CTTCTATCTTG---ATCCGCTGC------CTGGT.........................................................................25100.1010100000000
.....................................................................................TTCTATCTTG---ATCCGCTGC------CTGGTCAT......................................................................27100.1010000100000
......................................................................TAATTAATCGAATACTTCTATCTTG---AAA..........................................................................................28100.1010100000000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGTC........................................................................24100.1010100000000
..CTTCAAATTAAGCGATCTAATCAAAT...................................................................................................................................................................26100.1010000001000
.....CAAATTAAGCGATCTAATCAAATTAG................................................................................................................................................................26100.1010100000000
...........................................................................................................................AAGTTCAAAACATTTATCTGGGAAC...........................................25100.1010000100000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCA........................................................................................26100.1010100000000
TGCTTCAAATTAAGCGATCTAATCAAA....................................................................................................................................................................27100.1010000000010
.....................................................................................TTCTATCTTG---ATCCGCTGC------CTGGT.........................................................................24100.1010000001000
......................................................................................TCTATCTTG---ATCCGCTGC------CTGGTCATT.....................................................................27100.1010100000000
....................................................................................CTTCTATCTTG---ATCCGCTGC------CTGG..........................................................................24100.1010100000000
..........................................................TAGGAGGAAGCTTAATTAATCGAATA...........................................................................................................26100.1010100000000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CA............................................................................24100.1010100000000
...................................................................................ACTTCTATCTTG---ATCCGCTGC------CTGG..........................................................................25100.1010100000000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CTGGTC........................................................................28100.1010100000000
...................................................................................ACTTCTATCTTG---ATCCGCTGC------CTGGT.........................................................................26100.1010100000000
...................................................................................ACTTCTATCTTG---ATCCGCTGC------CTG...........................................................................24100.1010100000000
..........................................................................TAATCGAATACTTCTATCTTG---A............................................................................................22100.1010100000000
...............................................................................................................................TCAAAACATTTATCTGGGAACTTA........................................24110.0910100000000
.............................................................................................................................................TGGGAACTTATTTCTGGAATCG............................22110.0910100000000
..........................................................TAGGAGGAAGCTTAATTAATC................................................................................................................21110.0910100000000
.............................................................................................................................................TGGGAACTTATTTCTGGAATC.............................21110.0910100000000
..........................................................................................................................................ATCTGGGAACTTATTTCTGG.................................20110.0910100000000
..............................................................................CGAATACTTCTATCTTG---ATCC.........................................................................................21110.0910100000000
...............................................................................................................................TCAAAACATTTATCTGGGAACTTATTTC....................................28110.0910000000100
...............................................................................................................................TCAAAACATTTATCTGGGAA............................................20110.0910100000000
................................................................................AATACTTCTATCTTG---ATCCG........................................................................................20110.0910100000000
....TCAAATTAAGCGATCTAATCAAAT...................................................................................................................................................................24110.0910100000000
..............................................................................................................................TTCAAAACATTTATCTGGGAACTTA........................................25110.0910000000010
........................................................................................................................................TTATCTGGGAACTTATTTCTG..................................21110.0910000000100
.......................................................................................................................................TTTATCTGGGAACTTATTTCTGGAA...............................25110.0910000000100
.........................................................................................................................................TATCTGGGAACTTATTTCTGGAATCGC...........................27110.0910000000010
..........................................................................................................................................ATCTGGGAACTTATTTCTGGAATCGC...........................26110.0910000000010
.......................................T----TAAGGGAA--ACAATAGGAGG..............................................................................................................................20120.0810100000000
..............................................AGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................22120.0810100000000
................................................GGAA--ACAATAGGAGGAAGCT.........................................................................................................................20120.0810100000000
......................................AT----TAAGGGAA--ACAATAGGAGGAAA...........................................................................................................................24120.0810100000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGAA.........................................................................................................................27120.0810100000000
............................................TAAGGGAA--ACAATAGGAGGA.............................................................................................................................20120.0810100000000
...............................................GGGAA--ACAATAGGAGGAAGCT.........................................................................................................................21120.0810100000000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCAA........................................................................................................................28120.0810100000000
....................................ATAT----TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................28120.0810100000000
....................................ATAT----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................27120.0810000001000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAG............................................................................................................................24120.0810100000000
............................................TAAGGGAA--ACAATAGGAGGAAGCTC........................................................................................................................25120.0810000001000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAT............................................................................................................................24120.0810100000000
.......................................T----TAAGGGAA--ACAATAGGAGGAA............................................................................................................................22120.0810100000000
............................................TAAGGGAA--ACAATAGGAG...............................................................................................................................18120.0810100000000
......................................AT----TAAGGGAA--ACAATAGGAGGAAGCTT........................................................................................................................27120.0810100000000
....................................ATAT----TAAGGGAA--ACAATAGGAGG..............................................................................................................................23120.0810100000000
droPer2
TGCTTCAAATTAAGCGATCTAATCAAATTAGCTAAAATAT----TAAGGGAA--ACAATAGGAGGAAGCTTAATTAATCGAATACTTCTATCTTG---ATCCGCTGC------CTGGTCATTCAAGTTCAAAACATTTATCTGGGAACTTATTTCTGGAATCGCTAA-GCCATAAACTC------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACT..........................................28202.10428311002
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................26201.753502400011
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAA............................................26201.603201300019
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAC...........................................27201.50300300000
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................25200.80160101005
.....................................TAT----TAAGGGAA--ACAATAGGAGGAA............................................................................................................................24200.5010030007
.....................................TAT----TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................27200.408260000
.....................................TAT----TAAGGGAA--ACAATAGGAGGA.............................................................................................................................23200.306060000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGC.......................................................................................27140.213030000
......................................................................TAATTAATCGAATACTTCTATCTTG---A............................................................................................26140.213020001
......................................................................TAATTAATCGAATACTTCTATCTTG---.............................................................................................25140.213030000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGA.............................................25200.204030100
......................................................................................................................................................ATTTCTGGAATCGCTAA-GCCATAAACT.............2760.171010000
...................TAATCAAATTAGCTAAAATAT----TAAGGGA............................................................................................................................................28200.153000003
...................TAATCAAATTAGCTAAAATAT----TAAGG..............................................................................................................................................26200.153020001
.....................................TAT----TAAGGGAA--ACAATAGGAGG..............................................................................................................................22200.153030000
..........................................................................TAATCGAATACTTCTATCTTG---ATCCGCT......................................................................................28140.142010001
..........................................................TAGGAGGAAGCTTAATTAATCGAATACT.........................................................................................................28150.132200000
...........................TTAGCTAAAATAT----TAAGGGAA--ACAA.....................................................................................................................................25200.102020000
..........................................................................................................................CAAGTTCAAAACATTTATCTGGGAAC...........................................26200.102020000
............................................TAAGGGAA--ACAATAGGAGGAAG...........................................................................................................................22200.102000002
......................................AT----TAAGGGAA--ACAATAGGAGGAAGC..........................................................................................................................25200.102020000
.....................................TAT----TAAGGGAA--ACAATAGGA................................................................................................................................20200.102000002
..........................................................................TAATCGAATACTTCTATCTTG---ATC..........................................................................................24140.071010000
.......................................................................AATTAATCGAATACTTCTATCTTG---A............................................................................................25140.071010000
......................................................................TAATTAATCGAATACTTCTATCTTG---ATC..........................................................................................28140.071010000
............................................................................ATCGAATACTTCTATCTTG---ATCCGC.......................................................................................25140.071010000
..........................................................................TAATCGAATACTTCTATCTTG---ATCC.........................................................................................25140.071010000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCTG.....................................................................................26190.051010000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCT......................................................................................25190.051010000
.............................................................................TCGAATACTTCTATCTTG---ATCCGCTGC------C.............................................................................28190.051010000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CTGG..........................................................................26200.051010000
........................................................................................TATCTTG---ATCCGCTGC------CTGGTCATT.....................................................................25200.051010000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAAAA..........................................28200.051000001
.........................................................................................................................TCAAGTTCAAAACATTTATCTGGGAACA..........................................28200.051010000
..................................................................................TACTTCTATCTTG---ATCCGCTG.....................................................................................21200.051010000
..................................AAATAT----TAAGGGAA--ACAATAGGAG...............................................................................................................................24200.051010000
...................................................................................................TCCGCTGC------CTGGTCATTCAAGTTCAA............................................................26200.051010000
...........................................................................................................................................TCTGGGAACTTATTTCTGGAAT..............................22200.051010000
..................................................................................TACTTCTATCTTG---ATCCGCTGC------CTG...........................................................................25200.051010000
.........................................................................................................................TCAAGTTCAAAACATTTATCTGG...............................................23200.051010000
............................................TAAGGGAA--ACAATAGGAGGAAGCT.........................................................................................................................24200.051010000
..........................................................................................................................CAAGTTCAAAACATTTATCTGGG..............................................23200.051010000
......................................AT----TAAGGGAA--ACAATAGGAGGA.............................................................................................................................22200.051010000
..................................................................................................................TGGTCATTCAAGTTCAAAACATTTAT...................................................26200.051010000
..........................................................................................................C------CTGGTCATTCAAGTTCAAAACATT......................................................25200.051010000
........................................................................................................TGC------CTGGTCATTCAAGTTCAAAACATT......................................................27200.051010000
..................................................................................................................TGGTCATTCAAGTTCAAAACATTTATC..................................................27200.051010000
.....................................................................................................CGCTGC------CTGGTCATTCAAGTTCAA............................................................24200.051010000
............................................................................................................................................CTGGGAACTTATTTCTGGAAT..............................21200.051010000
..............................................................................................................................................GGGAACTTATTTCTGGAATCGCTA.........................24200.051010000
........................AAATTAGCTAAAATAT----TAAGGGA............................................................................................................................................23200.051010000
........................................................................................TATCTTG---ATCCGCTGC------CTG...........................................................................19200.051010000
.................TCTAATCAAATTAGCTAAAATAT----TAAGG..............................................................................................................................................28200.051010000
......................TCAAATTAGCTAAAATAT----TAAGGGAA--A........................................................................................................................................27200.051010000
droAna3
TGTTTGTAGTTGAGCGACCGAGTTAGCGAGCAAAGGTCAT----CATTGGAA--ACTAACGGGGGGAGTCTAATTAATTGAAGTTCGCCATCTTCTTCAGGATTATTCGTTGCATTGTCAT---CCTGAAGAATATTTACGTTCCGCTCTATATTAGGCACTGCTAAAGCTCTAAATTC------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACTGC...........................27203.957915631000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCAC..............................24201.25251240000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACTG............................26201.00201190000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACTGCT..........................28200.90188100000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACT.............................25200.6513670000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGGCAC..............................26200.5010190000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCAC..............................25200.357160000
........................................................................................................................T---CCTGAAGAATATTTACGTTCCGCTC..........................................26200.357160000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGGCACTGC...........................29200.306240000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACT.............................26200.306060000
................................................................................................TCAGGATTATTCGTTGCATTGTCAT---CC.................................................................27180.285050000
......................................................................................................................CAT---CCTGAAGAATATTTACGTTCCGC............................................26200.255050000
........................................................................................................................T---CCTGAAGAATATTTACGTTCCGC............................................24200.255050000
........................................................................................................................T---CCTGAAGAATATTTACGTTCCGCTCTA........................................28200.204400000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACC.............................25200.204040000
........................................................................................................................T---CCTGAAGAATATTTACGTTCCGCTCT.........................................27200.204040000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACTGC...........................28200.204040000
.........................................................................TTAATTGAAGTTCGCCATCTTCTTCA............................................................................................26200.204400000
...............................................................................................TTCAGGATTATTCGTTGCATTGTCAT---CC.................................................................28180.173120000
.....................................................................................................................................TATTTACGTTCCGCTCTATATTAGGCAC..............................28200.153120000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGGCACT.............................27200.153120000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACC.............................26200.153030000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGC................................22200.153210000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACTGCC..........................28200.153030000
.......................................T----CATTGGAA--ACTAACGGGGGGAGT..........................................................................................................................24200.102200000
......................................................................................................................CAT---CCTGAAGAATATTTACGTTCCGCTC..........................................28200.102020000
............................................................................................................................................GTTCCGCTCTATATTAGGCACTGC...........................24200.102020000
..........................................................................TAATTGAAGTTCGCCATCTTCTTCAGGAT........................................................................................29200.102200000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACTG............................27200.102110000
.....................................................................................................................................TATTTACGTTCCGCTCTATATTAGG.................................25200.102110000
.......................................T----CATTGGAA--ACTAACGGG................................................................................................................................18200.102110000
.......................................................................................................................AT---CCTGAAGAATATTTACGTTCCGCTC..........................................27200.102020000
....................................TCAT----CATTGGAA--ACTAACGGGGGGAG...........................................................................................................................26200.102200000
.............................................................................................................................................TTCCGCTCTATATTAGGCACTGCT..........................24200.102020000
................................................................................................................CATTGTCAT---CCTGAAGAATATTTACGTT................................................28200.102200000
..........................................................................................................TCGTTGCATTGTCAT---CCTGAAGAATAT.......................................................27170.061100000
.................................................................................................CAGGATTATTCGTTGCATTGTCAT---CC.................................................................26180.061010000
...............................................................................................TTCAGGATTATTCGTTGCATTGTCAT---C..................................................................27190.051010000
................................................................................................TCAGGATTATTCGTTGCATTGTCAT---C..................................................................26190.051010000
.......................TAGCGAGCAAAGGTCAT----CATTGGAA--.........................................................................................................................................25200.051100000
....................................................................TCTAATTAATTGAAGTTCGCCATCTT.................................................................................................26200.051100000
..................................................................AGTCTAATTAATTGAAGTTCGC.......................................................................................................22200.051010000
.............................................................................................................................................TTCCGCTCTATATTAGGCACTGCTAAA.......................27200.051100000
..........................................................................................................................................ACGTTCCGCTCTATATTAGGC................................21200.051010000
.............................................................................................................TTGCATTGTCAT---CCTGAAGAATATTTACG..................................................29200.051100000
...................................GTCAT----CATTGGAA--ACTAACGG.................................................................................................................................21200.051100000
..............................................................................................................TGCATTGTCAT---CCTGAAGAA..........................................................20200.051100000
...............GACCGAGTTAGCGAGCAAAGG...........................................................................................................................................................21200.051100000
..............................CAAAGGTCAT----CATTGGAA--ACTAACGGG................................................................................................................................27200.051100000
.............................................................................................................................................TTCCGCTCTATATTAGGCACTGCTAA........................26200.051010000
..........................................................................................................................................ACGTTCCGCTCTATATTAGGCACTGCT..........................27200.051100000
........................................................................................................................T---CCTGAAGAATATTTACGTTCCGCT...........................................25200.051010000
...............................AAAGGTCAT----CATTGGAA--ACTAACGGGG...............................................................................................................................27200.051010000
......................................AT----CATTGGAA--ACTAACGGGGGG.............................................................................................................................22200.051010000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGGC................................24200.051010000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACTGG...........................28200.051010000
................................................................................................TCAGGATTATTCGTTGCATTGTCAT---...................................................................25200.051100000
....................................TCAT----CATTGGAA--ACTAACGGGGGGAGTC.........................................................................................................................28200.051100000
..............................................................................................................TGCATTGTCAT---CCTGAAGA...........................................................19200.051100000
...............................................................GGGAGTCTAATTAATTGAAGTTCGCC......................................................................................................26200.051010000
......................................................................................................TTATTCGTTGCATTGTCAT---CC.................................................................21200.051100000
.............................................................................................................................................TTCCGCTCTATATTAGGCACTGC...........................23200.051010000
.....................................................................................................................TCAT---CCTGAAGAATATTTACGTTCCGC............................................27200.051100000
........................................................................................................................................TTACGTTCCGCTCTATATTAGGCACTGCT..........................29200.051010000
......................................................................................................................................ATTTACGTTCCGCTCTATATTAGGCAC..............................27200.051010000
................................................................................................................................................CGCTCTATATTAGGCACTGCTAA........................23200.051100000
...............................................................................................TTCAGGATTATTCGTTGCATTGTC........................................................................24200.051001000
.....................................CAT----CATTGGAA--ACTAACGGGGGGAGTC.........................................................................................................................27200.051000010
......................................................ACTAACGGGGGGAGTCTAA......................................................................................................................19200.051100000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGGCACTG............................28200.051010000
...............................AAAGGTCAT----CATTGGAA--ACTAACGG.................................................................................................................................25200.051100000
......................................................................TAATTAATTGAAGTTCGCCATCTTCT...............................................................................................26200.051100000
.......................................T----CATTGGAA--ACTAACGGGGGGAGTCT........................................................................................................................26200.051100000
....................................................................................................................................ATATTTACGTTCCGCTCTATATTAGG.................................26200.051010000
.........................................................................................................................................TACGTTCCGCTCTATATTAGGCACTGCTA.........................29200.051100000
.......................................................................................................................................TTTACGTTCCGCTCTATATTAGG.................................23200.051100000
..............................CAAAGGTCAT----CATTGGAA--ACTAACGG.................................................................................................................................26200.051100000
...............................................TGGAA--ACTAACGGGGGGAGTCTA.......................................................................................................................23200.051100000
...................................GTCAT----CATTGGAA--ACTAACGGGGG..............................................................................................................................24200.051100000
....................................................................TCTAATTAATTGAAGTTCGCC......................................................................................................21200.051010000
.......................................T----CATTGGAA--ACTAACGGGGGGAGTCTAA......................................................................................................................28200.051100000
..............................................................................................................................................TCCGCTCTATATTAGGCACTGCT..........................23200.051100000
..........................................................................TAATTGAAGTTCGCCATCTTCTTCAG...........................................................................................26200.051100000
..........................................................................................................................................ACGTTCCGCTCTATATTAGGCACTGCC..........................27200.051010000
..................................................................................GTTCGCCATCTTCTTCAGGAT........................................................................................21200.051100000
...................................................................................................................................................TCTATATTAGGCACTGCTAAAGCTC...................25200.051010000
......................................................................TAATTAATTGAAGTTCGCCATCTTC................................................................................................25200.051100000
droBip1
TGCTTGTAGTTGAGGGACCGAGTTAGCGAACAAAGGTCAT----CATTGGAA--ACTAACGGGGGGTGTCTAATTAATTGAAGTTCGCCATCTTCTTCAGGGTAATTTATCGCGTTCTCAT---CCTGAAGAATATTTACGTCCCGCTCTATATTTGGTACTGCCAAAGATCTAAACTC------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCTTTGCGTTAAGCGACCTGGACAG-CGAGCAAGGTTAT----CATCAGAA--ACTAACGGGGGAAGTCTAATTAGTTGAAGTTCGCCATCTTC---TGTGTTATTTACAGCATTGTCATCTTGG---AGTATATTAACGTTTTGTCCGACGTTTGGTACCGCCAAGGCCCTAAATTC------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGTTTTAAATTGAGCGACCGGGTAAGCGAGCAAAGATTTT----CTTCTGAA--ACCAACGGCGGAAGTCTAATAAGTTGAAGCTCACCCTCTTC---AACG---TTAGCAGCATCATCGT---CCTCAAACATATTTATGTTTTGGCCAACGTTTGGCACTGCCAAAGCTCTGAACTC------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTAATTTAT---------------------------------------------------------------------------------------AAAGGTGTACTTTTATTAATTTTTTATTTGATCGGTACACTTTAATTTGCATTAATTTC-------------------AAGTA------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCTTTAAATTAAGAGACCTAACTAAGGTGGCTAAATTTT----CAGGGGAA--ATAATTGGCGGAAGCTTTATTATGCGGATATTGCTATCCGG---ATCTACTTCCTGAACACGGTCGTCTAAGTTTAAAACATTTATTTGAGAAGATATTTCTGGAAAAGCTAAGGCCCTAAACTC------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGCTTTAAGTTGAGAGATCTAACTAAAGTTGGTAAGTTTT----TAGGGAAAATATAACTGGCGGGAGCTTTATTATCCGGATATTGGTACATGG---ATCAACTTCTTAAACATCGTTGCTTAACTTCAAAACATTTATTTGAGAATTTATTTCCGGAAAAGCTAAGGCCTTAAACTC------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGCTTTAAATTAAGAGATCTAACTAAGGTGGCTAAACTTT----CAGGGGAA--ATAATTGACGGGAGCTTTATTATGCGGATATTGCTATCCGG---ATCTACTTCCTGAACACGGTCGTCTAAGTTTAAAACATTGATTTGAGAAGATATTTCTGGAAAAGCTAAGACCCTAAACTC------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGCCTTAAATTAAGGGATCTAACTAAGGTTGCTAAGTTTT----CAGGTGAA--ATAATTGGCGGGAGCTTTATAACTCGGATATTGTTATCCGG---TTCTACATCTGAAACATTGTTGTTTAAGTTTAAGACATTAATTTGAGAAGATATTTCTGGAAACGCTAAGGCCCTAAACTC------------SizeHit CountTotal NormTotal
No Reads
dm3
TGCTCCAAATTTATAGATCTAACTAAATCTGCTAAGTTTAAATAAAGGGGAT--ACAATTAGCGGAAGCTTTATTACCCGGATATTGTTATC------------------------------------------------------------------------TAATACCCTAAACTCCTCATTAAGTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................C------------------------------------------------------------------------TAATACCCTAAACTCCTCA........2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TAATACCCTAAACTCCTCATTAAGTT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGCTCCAAATTTAAAGATCTAACTAAATTTGCTAAGTTTAAATAAAGGGGAT--ATAATTGGTGGAAGCTTTATTACCCGGATATTGCTATCTGG---ATCAACATCTAACACATTGTTGTTGAAGTTTAAAACCTTAATTTGAGAAGATATTTCAGGAATTGCTAATGCCCTAAACTC------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TGCTCCAAATTTAAAGATCTAACTAAATTTGCTAAGTTTAAATAAAGGGGAT--ATAATTGGTGGAAGCTTTATTACCCGGATATTGCTATCTGG---ATCAACATGTAACGCATTGTTGTTGAAGTTTAAAACCTTAATTTGAGAAGATATTTCAGGAATTGCTAATGCCCTAAACTC------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGCTCCAAATTTAGAGATCTAACTAAATTGGCTAAGTTTA----AAGGGGAT--ATAAGTGGGGGAAGCTTTATTACCCGGATATTGCT-TCCGG---ATCAACATCCAACAAATTGTTGTTCAAGTTTAAAACATTAATTTGAGAAGATATTTCAGGTAAAGCTAATGCCCTAAACTC------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................GAAGCTTTATTACCCGGATATTGC.......................................................................................................24201.8036053010000000
...TCCAAATTTAGAGATCTAACTAAATT..................................................................................................................................................................26201.50300121800000000
TGCTCCAAATTTAGAGATCTAACTAAAT...................................................................................................................................................................28200.8517041300000000
TGCTCCAAATTTAGAGATCTAACTAAA....................................................................................................................................................................27200.501009100000000
...........TAGAGATCTAACTAAATTGGCTAAGTT.........................................................................................................................................................27200.45900600030000
...................TAACTAAATTGGCTAAGTTTA----AAGGGGA............................................................................................................................................28200.35700000010006
..CTCCAAATTTAGAGATCTAACTAAATT..................................................................................................................................................................27200.30601500000000
....CCAAATTTAGAGATCTAACTAAATT..................................................................................................................................................................25200.25504100000000
................................TAAGTTTA----AAGGGGAT--ATAAGTGG.................................................................................................................................24200.20403000010000
...TCCAAATTTAGAGATCTAACTAAAT...................................................................................................................................................................25200.20401300000000
................................................................................................................................TAAAACATTAATTTGAGAAGATATT......................................25200.15300300000000
...............................................................GGAAGCTTTATTACCCGGATATTGC.......................................................................................................25200.15301200000000
.....................................TTA----AAGGGGAT--ATAAGTGG.................................................................................................................................19200.15303000000000
................................TAAGTTTA----AAGGGGAT--ATAAGTG..................................................................................................................................23200.10201100000000
...........TAGAGATCTAACTAAATTGGCTAAGT..........................................................................................................................................................26200.10201100000000
.................................................................AAGCTTTATTACCCGGATATTGCT-.....................................................................................................24200.10202000000000
..CTCCAAATTTAGAGATCTAACTAAA....................................................................................................................................................................25200.10201100000000
...........TAGAGATCTAACTAAATTGGCTAAGTC.........................................................................................................................................................27200.10200200000000
...................TAACTAAATTGGCTAAGTTTA----AAGGGG.............................................................................................................................................27200.10202000000000
...............................................................................................................................TTAAAACATTAATTTGAGAAGATAT.......................................25200.10202000000000
...........................TTGGCTAAGTTTA----AAGGGGAT--ATAAGT...................................................................................................................................27200.10202000000000
......................................................................................................................................ATTAATTTGAGAAGATATT......................................19200.05101000000000
...........................TTGGCTAAGTTTA----AAGGGGAT--ATAAG....................................................................................................................................26200.05101000000000
TGCTCCAAATTTAGAGATCTAACTAA.....................................................................................................................................................................26200.05101000000000
...TCCAAATTTAGAGATCTAAC........................................................................................................................................................................20200.05101000000000
................................................................................................................................TAAAACATTAATTTGAGAAGATATTTCAG..................................29200.05100100000000
...................TAACTAAATTGGCTAAGTTTA----AAGG...............................................................................................................................................25200.05101000000000
.......................TAAATTGGCTAAGTTTA----AAGGGGAT--.........................................................................................................................................25200.05101000000000
...TCCAAATTTAGAGATCTAACTAAATC..................................................................................................................................................................26200.05100100000000
TGCTCCAAATTTAGAGATCTAACTAAATT..................................................................................................................................................................29200.05101000000000
.......................TAAATTGGCTAAGTTTA----AAGGGG.............................................................................................................................................23200.05100100000000
..................................................................AGCTTTATTACCCGGATATTGC.......................................................................................................22200.05100100000000
..CTCCAAATTTAGAGATCTAACTAAATC..................................................................................................................................................................27200.05100100000000
.................TCTAACTAAATTGGCTAAGTTTA----AAGG...............................................................................................................................................27200.05101000000000
....................................................................CTTTATTACCCGGATATTGC.......................................................................................................20200.05100100000000
TGCTCCAAATTTAGAGATCTAACT.......................................................................................................................................................................24200.05100100000000
..........TTAGAGATCTAACTAAATTGGCTAAGT..........................................................................................................................................................27200.05100100000000
.GCTCCAAATTTAGAGATCTAACTAAAT...................................................................................................................................................................27200.05100100000000
...TCCAAATTTAGAGATCTAACTAAA....................................................................................................................................................................24200.05100100000000
............................TGGCTAAGTTTA----AAGGGGAT--ATAAG....................................................................................................................................25200.05101000000000
.......................TAAATTGGCTAAGTTTA----AAGGGGA............................................................................................................................................24200.05101000000000
......................................TA----AAGGGGAT--ATAAGTGG.................................................................................................................................18200.05101000000000
...........................TTGGCTAAGTTTA----AAGGG..............................................................................................................................................18200.05101000000000
.......................TAAATTGGCTAAGTTTA----AAGGGGAT--A........................................................................................................................................26200.05101000000000
droEre2
TCTTCGAAGTTTATAGTTATGACAAAATTTCTTTTGCTCT----TAGTGGAT--ATA-TAGGGGGGAATATTATTATCCCGATATTTCTATCCAG---ATAAAAATTTCGCACATTGTTGTTTATGCTTAAAACATAAATTTCAGTCGATATTTCGGGAATTGATAACGCCCTAAATTC------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 02:32 PM