ID:

dmo_1211

Coordinate:

scaffold_6496:20148027-20148113 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.9 -7.8 -7.5

Flybase annnotation

CDS [Dmoj\GI18572-cds]; exon [dmoj_GLEANR_3508:3]; exon [dmoj_GLEANR_3508:2]; CDS [Dmoj\GI18572-cds]; intron [Dmoj\GI18572-in]; Antisense to intron [Dmoj\GI21036-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_6308:520791-520814 -
  2. scaffold_6309:1669-1692 -
  3. scaffold_6328:347124-347147 -
  4. scaffold_6359:3605418-3605441 -
  5. scaffold_6473:5193517-5193540 -
  6. scaffold_6473:7512758-7512781 -
  7. scaffold_6496:2574222-2574245 -
  8. scaffold_6496:4016401-4016424 -
  9. scaffold_6496:17613182-17613205 -
  10. scaffold_6500:5277183-5277206 -
  11. scaffold_6500:19374259-19374282 -
  12. scaffold_6500:25857828-25857851 -
  13. scaffold_6540:14626426-14626449 -
  14. scaffold_6540:18943320-18943343 -
  15. scaffold_6654:865519-865542 -
  16. scaffold_6680:7371641-7371664 -
  17. scaffold_6680:8327016-8327039 -
  18. scaffold_6680:9141254-9141277 -
  19. scaffold_6680:11153927-11153950 -
  20. scaffold_6680:19180991-19181014 -
  21. scaffold_6359:1200569-1200592 -
  22. scaffold_6359:3047446-3047469 -
  23. scaffold_6359:4341594-4341617 -
  24. scaffold_6473:1175704-1175727 -
  25. scaffold_6473:4254316-4254339 -
  26. scaffold_6473:6624419-6624442 -
  27. scaffold_6473:12795378-12795401 -
  28. scaffold_6496:5794952-5794975 -
  29. scaffold_6496:7181975-7181998 -
  30. scaffold_6496:7725506-7725529 -
  31. scaffold_6496:19413767-19413790 -
  32. dmo_1211  scaffold_6496:20148035-20148058 -
  33. scaffold_6496:24494239-24494262 -
  34. scaffold_6500:8595925-8595948 -
  35. scaffold_6500:27512528-27512551 -
  36. scaffold_6540:16910100-16910123 -
  37. scaffold_6540:21105689-21105712 -
  38. scaffold_6680:790129-790152 -
  39. scaffold_6680:9885041-9885064 -
  40. scaffold_6680:18954586-18954609 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------##################################################
AGGCAGCTCCACAGCGTCATCCGCAGCAGCAGTTTCCCCACTTGCATCCAGTGCAACAGCAGCTGAGACAGCCACAGCAACAGCCACAACAACAGCAGCAGCAACAACAACAACAACAACAGCAACAACAGCAACAGCTGAGACTGTTGCACGACGTGGACGACGAGCCGCCGCTCTCATTCCGTCC
**************************************************........((.((((...........((....))...........)))).))...................................**************************************************
Read size # Mismatch Hit Count Total Norm Total V110
male body
M046
female body
M060
embryo
V041
embryo
....................................................................................................................................................GCACGACGTGGACGACGAGCCGCC............... 24 0 1 1.00 1 1 0 0 0
.......TCCACAGCGTCATCCGCAGC................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................CGTGGACGACGAGCCGCCGCTCTCA........ 25 0 1 1.00 1 0 1 0 0
...................................................................................................................................CAACATCTGAGACTGAAGCA.................................... 20 3 16 0.56 9 0 9 0 0
............................GCAGTTTTTCCACTTGCACC........................................................................................................................................... 20 3 13 0.08 1 0 0 1 0
.............................................................................................................................................................GGACGACGATCCGACGATC........... 19 3 20 0.05 1 0 0 1 0
.........................................................................................................AACAACAACAACAACAGCAACAAC.......................................................... 24 0 20 0.05 1 0 0 1 0
...................................................................................CCACAACAACAGCAGCAGCA.................................................................................... 20 0 20 0.05 1 0 0 0 1

Anti-sense strand reads

TCCGTCGAGGTGTCGCAGTAGGCGTCGTCGTCAAAGGGGTGAACGTAGGTCACGTTGTCGTCGACTCTGTCGGTGTCGTTGTCGGTGTTGTTGTCGTCGTCGTTGTTGTTGTTGTTGTTGTCGTTGTTGTCGTTGTCGACTCTGACAACGTGCTGCACCTGCTGCTCGGCGGCGAGAGTAAGGCAGG
**************************************************........((.((((...........((....))...........)))).))...................................**************************************************
Read size # Mismatch Hit Count Total Norm Total V049
head
V110
male body
M060
embryo
.......................................................TGTCGGCGACTCTGTGGGTGTCG............................................................................................................. 23 2 1 1.00 1 1 0 0
TCGGTCGAAGTCTCGCAGTAG...................................................................................................................................................................... 21 3 3 0.33 1 0 1 0
.........................................................TCGGCGACTCTGTGGGTGTCC............................................................................................................. 21 3 4 0.25 1 1 0 0
.......................................................................................TTGTTGTCGTCGTCGTTGT................................................................................. 19 0 20 0.05 1 0 1 0
...........................................................................................TGTCGTCGTCGTTGTTGTTGTT.......................................................................... 22 0 20 0.05 1 0 0 1
......................................................................................GTTGTTGTCGTCGTCGTTGTTG............................................................................... 22 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:20147977-20148163 - dmo_1211 AGGCA------GCT--CCACAG-------CGTCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTTCCCCAC------------TTGCATCCAGTGCAAC------AGCAGCTGA----------------------------G---------------ACAGCC---ACAGCAACAGCCACAACAA---------CAGCAGC---AGCA-----------------------A---C------AACAA---CAA------------------------------CAA------CAACA--------GCAAC---------------AACAGCAACAGCTG--------AGAC---------------TGTTGCACGA----------CGTGGACGACGAGCCG---------------CCGCTCTCATTCCGTCC
droVir3 scaffold_12875:12885933-12886140 - AGGCG------GCA--CCACAG-------CGCCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTTCCACAT------TT---------GCAGAGCCCACA---GCAACAGAGACAACAACTG-------CAGCAGCAACAGT---------------TGCAACA---ACAACAACTGCATCTGCAA---------CAG---CCGCAGCA-----------------------A---C------AGCTG---CAG---------------------------------------CAACA---GCA--ACAGCCAC------------AACAGCAGC---TG--------CGCC---------------TGCTGCACGA----------CGTCGACGACGAGCCG---------------CCGCTCTCGTTCCGGCC
droGri2 scaffold_15245:7481616-7481832 + AAGCG------GCA--CCGCAA-------CGCCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTCCCATTTCTGCAAC---------------AGCAACCAC---AACAGCAAC----------------------------AGCAACCACAGCAGCAGCAG------------------CAACCA---------CAGCAGC---AACA-----------------------G---C------AATTG---CAACAGCATCATACACAACATACACAATATCAGCAA------CAACA--------GCAAC---------------AACAGCAACCGTTG--------CGTC---------------TGTTGCATGA----------CATTGATGACGAGCAG---------------CCGTTATCATTTCGGCC
droWil2 scf2_1100000004958:1727963-1728150 - AGGCA------ACT-------GCAA----CAGCAAC------AGCAG----CAACAATTG-----------------------------------------------------------------------CAGCAT------CA---------GCAACAGCAACAGCAGCAACAAATGCAACA-------------------GCAAC---------------AGCAGCAACAATTGCAGCAACAGCAACAG---------CAACAGC---AGCA---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------AGCCACAATGGCA---------GCAAC---------------------------------------------------------------------AGCAACA---GCAGCTGCAGCTCGAATACCG
dp5 XL_group1e:1458249-1458431 + AAGCA------GCA-------CCAG----CACCAGC------A---------------------------------------------------------------------------GCAGCACCAGAT---------------ACAGCTGC---------------A----------------------GCAGCAGCAACAACAGC---------------AGCAGCA---ACAACAACAGCAACAACAA---------CAGCAGC---AGCA-----------------------A---C------ATCAG---CTG------------------------------CAA------CAGCA--------GCAAC---------------AACAGCAACAGCAA------CA--TAAATA--------CAATGTGGGACGATCTCGGT---------CGAGGGACAG---------------TGGCTCC----CATTCC
droPer2 scaffold_18:298245-298427 + AAGCA------GCA-------CCAG----CACCAGC------A---------------------------------------------------------------------------GCAGCACCAGAT---------------ACAGCTGC---------------A----------------------GCAGCAGCAGCAACAGC---------------AGCAGCA---ACAACAACAGCAACAACAG---------CAGCAGC---AGCA-----------------------A---C------ATCAG---CTG------------------------------CAA------CAGCA--------GCAAC---------------AACAGCAACAGCAA------CA--TAAATA--------CAATGTGGGACGATCTCGGT---------CGAGGGACAG---------------TGGCTCC----CATTCC
droAna3 scaffold_13340:23111153-23111327 - TCACG------GCT--CTGCAG-------CAGCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGCAGCAGCAGCA---------GCAGCAGC---A----------------------CAG---CC---------AGGCGCA---GCAGCAA------CAGCAA---------CAGCAGC---AGCA-----------------------A---C------AACAC---CAT------------------------------CAC------CAGCA--------GCAAC---------------AGCAGCAGCA--------------CATGTACCACGCTGCAGT----------------------GGCTGCCCACCAGCAGCAGTT---------------GTTGCAACA
droBip1 scf7180000396737:1834825-1835005 + AGCCC------ACG--CAACAGCAG----CAGCAGC------AGGTG----CAGCAATT-----------------------------------------------------------GCAGCAGCAAGT---------------GCAACA---G---------TTGCAACAGCAGCAGCAACAGTTGCTG----------------C---------------AGCAACA---ACAGCAGCAGCAGCAACAA---------CAACAGC---AGCA-----------------------G---C------ATCAG---CCA------------------------------CAGCAGCAACAACAACGACCAC--CGCC------TAC---------GCATC---------------------------------------------------------------------TGCACGA---------------GCAGCAGCT
droKik1 scf7180000302220:11867-12044 + G--CAGCACCAGCA-------GAAG----CAGCACC------AG-------CAGCA---GCA--------------------------------------------------------GCACCAGCAGC------------------------------AGCAGCACCAGCAGCAGCAGC-------------------------ACC---------------ACCAGCA---GCAGCA---GCAACAACAG---------CAG---C---AGCA-----------------------GCAACAGCAGCA---G---CAG------------------------------CAC------CAACA-----------------------------GCAGCAACAGCACCAGCTGCA--------------------GCA---TCA----------CAACAACAAC-AACAG---------------CAGCAG----TCTTTCC
droFic1 scf7180000454076:102990-103179 + AGCCG------ACG--TCGCAG-------CAACAAC------AGC--AACA--------GCAGCATCAGCA-----------------------------------------------GCAACT------------------------------CC---TGCAG------CAGCAGCAGCAACT-------------------CCAGC---------------AGCA---------GCA---GCAACAACAGCAGCAGCAACTG---C---TGCA---GCAACAGCAGCAACAACA--G---C------AACTG---TTG---------------------------------------CAACAGCA-----GCAAC---------------TGCTGCAGCAG-----------------------------------------------------CAGCAAC-------------TCCAGCAGCAACCTTCGCTGCACGC
droEle1 scf7180000491194:690270-690430 + A--CAACGGCAGCC--CAGCAG-------CAGCAAC------AT---------------------------------------------------------------------------------CAGCA---------------GC------------AGCAACA-------------------------GCAGCAGCAGCAACAGC---------------AGCAGCA---GCAACAGCAGCAACAGCAG---------CAGCAGC---AACA-----------------------A---C------ATCAA---CAG------------------------------CAA------CAACA--------GCAAC---------------ATCACCAGCAGCAA-----------C----------------------------------------------------TGCAACAT--GCTGCTGCTGC-ACTGCATCC
droRho1 scf7180000760202:71810-71990 + AGCAA------ATT--CAACAACAGCAG-CAACAAC------A---------------------------------------------------------------------------------GCAGCAGCAACAACAACAGCA---------GC---AGCAAC------AACAGCAGC----------------------------AGCAACAACAGCAGCAGCAA------------------CAACAA---------CAGCAGC---AGCA-----------------------A---C------AACAG---CAGCAGCAACAACAACAGCAGCAGCAACAACAACAGCAGCAGCAAC-----------------------------AACAGCAGC---------------------------------------------------------------------AGCAACA---------------ACAGCAGCA
droBia1 scf7180000302113:1788162-1788337 - AGGCA------ATT-------ACAG----CTGCGAC------AA------------------------------------------------------------------------CGGCAGCAACATGC---AAT---------GCC---------------ACA------GCA----------------GCAGCAACAACATCCTC---------------GGCAGCA---GCAGCAACAGCCACATCAG---------CAGCAGC---AGCA-----------------------A---C------ACCAA---CAA------------------------------CAT------CCACA-----A--ACAAC---------------GACAACAACAGCGA------TA--ACTTTG--------CAAT----------------------GGACGCC----AGTGA------------AATC----GCCACTTTC
droTak1 scf7180000415872:839408-839596 - GAGCA------GCA-------GCAG----CAGCGCC------AG------------------------------------------------------------------------CAGCAGCAGCAACT---------------GCAGCA------------------GCACCGCGAGCAGCA-------------------GCACC---------------ACCAGCA---GCAGCAG---------------------CAG---C---GCGA------GCAACAGC------AGC--AGC------ACCGCGAGCAG------------------------------CAG------CAACA--------GCAAC---------------ACCAGCAGCAGTCC--------------AG----CGAGAAGAGTCCGCCCACCTCGTC---CGCCGC-----AGCC---------------GCCGCCGCCTCTTCCTCC
droEug1 scf7180000409061:49475-49648 - CGGCG------GCATACACCAG-------CAGCATC------AGC--AACA--------GCA--------------------------------------------------------GCACCAGCA------GCA---A---CA---------AC---AGCAA------CAACATCAGCAACA-------------------ACAGC---------------ATCA---------GCA---GCAACAACACCACCAGCAGCAG---C------AACACCACCAACAGC------AGC--AAC------ACCAC---CAA------------------------------CAG------CAACAAC--------ATCTAC------------AACAGCAGC---------------------------------------------------------------------AGCAGCA---------------ACACCAGCA
dm3 chr3R:13838981-13839154 + G--CA------GCA-------CCACCACACAGCA-GCGCAGCACTAC----CACCACAG-----------------------------------------------------------CCACCAGACAGC---------------GCACCA---C---------CAGCAGCAGCAACAGCAGCA----------------------CC---------------ACCAGCA---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--AGGCACAGCAGCAGCA--------------------------CCTGAG--------C----------------------CACCACCACC----ACCACCATCA---------------TCACCATCA
droSim2 x:9134110-9134307 + CATCT------GCA-------CATG----CAGCATGCGCAACATCAT----CTGCACTTG-----------------------------------------------------------------------TCCCAT------CA---------GCAGGCGCAACA---GCAGCACATGCAACACTTGACA-------CA---GCAAC---------------AGCAGCA---GCAGCA---GCAACAACAA---------CAG---C---AGCA-----------------------GCAGC------AACAG------------------------------------CAGCAGCAGCAACA---ACAAC--AGCCGCAACAGCAGCAACA-----------------------------------------------TGA----------CTTCCTCAGC--------------------GCCGCCACCCTGCTGTCC
droSec2 scaffold_34:313212-313383 - G--CAGCA---GCA-------GCAG----CATCAGC------A---------------------------------------------------------------------------GCAACTGCAGTT---------------GCAACA---ACAGCAGCAGCAGCAGCAACAGTTGC-------------------------------------------AGCTGCA---ACACCAACAGCATCAACAG---------CAGCAGC---AGCA-----------------------T---C------AACAG---CAA------------------------------CAT------CAACA--------GCAGC---------------A---GCAACAACATCAGGCGCT--------------------GCAG--------CTGTCGAC--GGATG-------------------------GCGG----GCAGGCG
droYak3 X:18184533-18184733 + CATCT------GCA-------CATG----CAGCAGGCGCAACATCAT----TTGCACTTG-----------------------------------------------------------------------TCGCAT------CA---------GCAGGCGCAACA---GCAGCACATGCAACACTTGACC----------------C---------------AGCAGCA---ACAGCAACAGCAACAACAG---------CAGCAGC---AGCA-----------------------A---C------AACAG---CAA------------------------------CAGCAGCAACAACAGCAACAAC--AGCCGCAACAGCAGCAACA-----------------------------------------------TGA----------CTTCCTCAGC--------------------GCCGCCGCCCTGCTGTCC
droEre2 scaffold_4690:7483664-7483842 + AACCC------------CATGT-------GGCCATGCGCGACCTCAA---------------------GCAGCGCCTCTTCGATCTGCTGCGCTCCGGCGGCAACAGTAATGGCAACAGCAGCAACAT---------------CA---------------------------GCA-------------------------------GC---------------AGCAACA---ACAACAACAACAGCAACAA---------CAGCGGC---AGCA-----------------------A---C------GGCAG---CAG------------------------------CAG------CAACA--------CGAAC---------------AACAGCCACAATTC----------------------------GCA---TCA----------CAT--------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGGCA------GCT--CCACAG-------CGTCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTTCCCCAC------------TTGCATCCAGTGCAAC------AGCAGCTGA----------------------------G---------------ACAGCC---ACAGCAACAGCCACAACAA---------CAGCAGC---AGCA-----------------------A---C------AACAA---CAA------------------------------CAA------CAACA--------GCAAC---------------AACAGCAACAGCTG--------AGAC---------------TGTTGCACGA----------CGTGGACGACGAGCCG---------------CCGCTCTCATTCCGTCCSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGA----------CGTGGACGACGAGCCG---------------CC...............2411.001000001
.............T--CCACAG-------CGTCATC------C---------------------------------------------------------------------------GCAGC..........................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGACGACGAGCCG---------------CCGCTCTCA........2511.001100000
.....................................................................................................................................................................................................................................................................................................................AACAA---CAA------------------------------CAA------CAACA--------GCAAC---------------AAC..........................................................................................................24200.051000010
...................................................................................................................................................................................................................................................CCACAACAA---------CAGCAGC---AGCA-----------------------...........................................................................................................................................................................................................20200.051010000
droVir3
AGGCG------GCA--CCACAG-------CGCCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTTCCACAT------TT---------GCAGAGCCCACA---GCAACAGAGACAACAACTG-------CAGCAGCAACAGT---------------TGCAACA---ACAACAACTGCATCTGCAA---------CAG---CCGCAGCA-----------------------A---C------AGCTG---CAG---------------------------------------CAACA---GCA--ACAGCCAC------------AACAGCAGC---TG--------CGCC---------------TGCTGCACGA----------CGTCGACGACGAGCCG---------------CCGCTCTCGTTCCGGCCSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..................................................................................................................................TCCACAT------TT---------GCAGAGCCCACA---............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................GTTTCCACAT------TT---------GCAGAGCCCAC................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................TTCCACAT------TT---------GCAGAGCCCAC................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................AGAGCCCACA---GCAACAGAGACAACA.............................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................ACAACTGCATCTGCAA---------CAG---CC........................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AACA---GCA--ACAGCCAC------------AACAGCA......................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................T---------GCAGAGCCCACA---GCAACAGAG...................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................................................................A---GCA--ACAGCCAC------------AACAGCAGC---.................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGA----------CGTCGACGACGAGC..................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGC---TG--------CGCC---------------TGCTGCACGA----------CGTC............................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................AACTGCATCTGCAA---------CAG---CC........................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AACTGCATCTGCAA---------CAG---CCGC......................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................CAGCAGTTTCCACAT------TT---------GCAGAGCC...................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................CA---GCAACAGAGACAACAAC...........................................................................................................................................................................................................................................................................................................................1930.331001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACAACTG-------CAGCAGCAACA.......................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
droGri2
AAGCG------GCA--CCGCAA-------CGCCATC------C---------------------------------------------------------------------------GCAGCAGCAGTTCCCATTTCTGCAAC---------------AGCAACCAC---AACAGCAAC----------------------------AGCAACCACAGCAGCAGCAG------------------CAACCA---------CAGCAGC---AACA-----------------------G---C------AATTG---CAACAGCATCATACACAACATACACAATATCAGCAA------CAACA--------GCAAC---------------AACAGCAACCGTTG--------CGTC---------------TGTTGCATGA----------CATTGATGACGAGCAG---------------CCGTTATCATTTCGGCCSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...........................................................................................................................................GCAAC---------------AGCAACCAC---AACAGCA...................................................................................................................................................................................................................................................................................................................................2160.17110
..............................................................................................................................................AC---------------AGCAACCAC---AACAGCAAC----------------------------A....................................................................................................................................................................................................................................................................................................21110.09110
..............................................................................................................................................AC---------------AGCAACCAC---AACAGCA...................................................................................................................................................................................................................................................................................................................................18200.05110
......................................................................................................................................................................AC---AACAGCAAC----------------------------AGCAACCA.............................................................................................................................................................................................................................................................................................19200.05110
droWil2
AGGCA------ACT-------GCAA----CAGCAAC------AGCAG----CAACAATTG-----------------------------------------------------------------------CAGCAT------CA---------GCAACAGCAACAGCAGCAACAAATGCAACA-------------------GCAAC---------------AGCAGCAACAATTGCAGCAACAGCAACAG---------CAACAGC---AGCA---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------AGCCACAATGGCA---------GCAAC---------------------------------------------------------------------AGCAACA---GCAGCTGCAGCTCGAATACCGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
..........................................................TG-----------------------------------------------------------------------CAGCAT------CA---------GCAACAGCAACAGCAG...........................................................................................................................................................................................................................................................................................................................................2640.25100010
..........................................................TG-----------------------------------------------------------------------CAGCAT------CA---------GCAACAGCAACAG..............................................................................................................................................................................................................................................................................................................................................2340.25101000
.......................................................................................................................................................................................................................................................AACAG---------CAACAGC---AGCA---------ACA......................................................................................................................................................................................................................19200.15300030
..................................................................................................................................................................................................................................................................................A---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAAC..........................................................................................................................................24200.15303000
...........................................................................................................................................................................AACAAATGCAACA-------------------GCAAC---------------AGC...................................................................................................................................................................................................................................................................................2190.11101000
.........................................................................................................................................................................................................................................................................................................................................................................................CACAATGGCA---------GCAAC---------------------------------------------------------------------AGCAACA---GCAGT................2790.11100010
.......................................................................................................................................................................................................................................................................................................T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------A..............................................................................................................................22200.10202000
........................................................................................................................................T------CA---------GCAACAGCAACAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................24100.10100010
.............................................................................................................................................................................................................................................................................................................................CAA------------------------------------CAACAACAGC--------AGCCACAATG.....................................................................................................................23140.07101000
..........................................................................................................................................................................................................................................................AG---------CAACAGC---AGCA---------ACAAA------T--G---C------AACTG---C.......................................................................................................................................................................................27150.07101000
....................................................................................................................................AGCAT------CA---------GCAACAGCAACAGCAG...........................................................................................................................................................................................................................................................................................................................................23170.06101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GCAGCTGCAGCTCGAATACCG26170.06101000
.......................................................................................................................................AT------CA---------GCAACAGCAACAGCAGCAAC.......................................................................................................................................................................................................................................................................................................................................24190.05101000
...........................................................................................................................................................CAACAGCAACAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................20200.05100010
.......................................................................................................................................................................................A-------------------GCAAC---------------AGCAGCAACAATTG........................................................................................................................................................................................................................................................................20200.05101000
................................................................................................................................................A---------GCAACAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................19200.05101000
................................................................................................................................................................................................................................................CAACAGCAACAG---------CAACAGC---AG....................................................................................................................................................................................................................................21200.05101000
..................................................................................................................................................................................................................................................................................A---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAA...........................................................................................................................................23200.05101000
..................................................................................................................................................................................................................................................................................A---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------...............................................................................................................................27200.05101000
.......................................................................................................................................................................................................................................................................................................T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------AGC............................................................................................................................24200.05101000
..................................................................................................................................................................................................................................................................................A---------ACAAA------T--G---C------AACTG---CAA------------------------------------CAACAACAGC--------A..............................................................................................................................28200.05101000
dp5
AAGCA------GCA-------CCAG----CACCAGC------A---------------------------------------------------------------------------GCAGCACCAGAT---------------ACAGCTGC---------------A----------------------GCAGCAGCAACAACAGC---------------AGCAGCA---ACAACAACAGCAACAACAA---------CAGCAGC---AGCA-----------------------A---C------ATCAG---CTG------------------------------CAA------CAGCA--------GCAAC---------------AACAGCAACAGCAA------CA--TAAATA--------CAATGTGGGACGATCTCGGT---------CGAGGGACAG---------------TGGCTCC----CATTCCSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................................................................................................................................................................................................AGCAGCAACAACAGC---------------AGCA..................................................................................................................................................................................................................................................................................19200.1530300000000
.................................................................................................................................................................................................................................CAGCA---ACAACAACAGCAACAAC...........................................................................................................................................................................................................................................................22200.1020101000000
...............................................................................................................................................................................................................................AGCAGCA---ACAACAACAGCAAC..............................................................................................................................................................................................................................................................21200.1020110000000
.....................................................................................................................................................................................................................................................ACAACAA---------CAGCAGC---AGCA-----------------------A---C------................................................................................................................................................................................................20200.1020010100000
...................................................................................................................................................................................................................................................CAACAACAA---------CAGCAGC---AGCA-----------------------A---C------A...............................................................................................................................................................................................23200.1020100100000
............................................................................................................................................................................................................................................ACAACAGCAACAACAA---------CAGCAGC---......................................................................................................................................................................................................................................23140.0710100000000
.......................................................................................................................................................GC---------------A----------------------GCAGCAGCAACAACAGC---------------AGC...................................................................................................................................................................................................................................................................................23200.0510100000000
......................................................................................................................................................................................................CAACAACAGC---------------AGCAGCA---ACAACAAC....................................................................................................................................................................................................................................................................25200.0510010000000
......................................................................................................................................................................................................CAACAACAGC---------------AGCAGCA---AC..........................................................................................................................................................................................................................................................................19200.0510010000000
..........................................................................................................................................................................................................................................CAACAACAGCAACAACAA---------CAGC............................................................................................................................................................................................................................................22200.0510010000000
.....................................................................................................................................................................................................GCAACAACAGC---------------AGCAGCA---ACAA........................................................................................................................................................................................................................................................................22200.0510000100000
........................................................................................................................................................................A----------------------GCAGCAGCAACAACAGC---------------AGCAGC................................................................................................................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................C---------------A----------------------GCAGCAGCAACAACAGC---------------AGC...................................................................................................................................................................................................................................................................................22200.0510010000000
..........................................................................................................................................................................................................AACAGC---------------AGCAGCA---ACAACAAC....................................................................................................................................................................................................................................................................21200.0510010000000
.........................................................................................................................................................................................................CAACAGC---------------AGCAGCA---ACAACA......................................................................................................................................................................................................................................................................20200.0510000100000
...........................................................................................................................................................................................................ACAGC---------------AGCAGCA---ACAACAACA...................................................................................................................................................................................................................................................................21200.0510000001000
...........................................................................................................................................................................................................................................................................................................................................................................A--------GCAAC---------------AACAGCAACAGCA................................................................................................19200.0510100000000
..................................................................................................................................................................................................................................................GCAACAACAA---------CAGCAGC---AGC...................................................................................................................................................................................................................................20200.0510000100000
.................................................................................................................................................................................................................................................AGCAACAACAA---------CAGCAGC---A.....................................................................................................................................................................................................................................19200.0510100000000
........................................................................................................................................................C---------------A----------------------GCAGCAGCAACAACAGC---------------AGCAG.................................................................................................................................................................................................................................................................................24200.0510100000000
................................................................................................................................................................................................................................................CAGCAACAACAA---------CAGCAGC---AG....................................................................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................................................................................................AACAGCAACAACAA---------CAGCAGC---AGC...................................................................................................................................................................................................................................24200.0510100000000
............................................................................................................................................................................................................CAGC---------------AGCAGCA---ACAACAACA...................................................................................................................................................................................................................................................................20200.0510010000000
..........................................................................................................................................................................................................................................CAACAACAGCAACAACAA---------CA..............................................................................................................................................................................................................................................20200.0510000001000
.................................................................................................................................................................................................................................CAGCA---ACAACAACAGCAACA.............................................................................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................AACAGC---------------AGCAGCA---ACAACAACAG..................................................................................................................................................................................................................................................................23200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................CAA------CAGCA--------GCAAC---------------AACAGCAAC....................................................................................................22200.0510000100000
..................................................................................................................................................................................................................................................GCAACAACAA---------CAGCAGC---A.....................................................................................................................................................................................................................................18200.0510000100000
........................................................................................................................................................................................................................................................................................................................................................................AGCA--------GCAAC---------------AACAGCAACAG..................................................................................................20200.0510100000000
...........................................................................................................................................................................................................ACAGC---------------AGCAGCA---ACAACAAC....................................................................................................................................................................................................................................................................20200.0510001000000
........................G----CACCAGC------A---------------------------------------------------------------------------GCAGCACCA......................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
AAGCA------GCA-------CCAG----CACCAGC------A---------------------------------------------------------------------------GCAGCACCAGAT---------------ACAGCTGC---------------A----------------------GCAGCAGCAGCAACAGC---------------AGCAGCA---ACAACAACAGCAACAACAG---------CAGCAGC---AGCA-----------------------A---C------ATCAG---CTG------------------------------CAA------CAGCA--------GCAAC---------------AACAGCAACAGCAA------CA--TAAATA--------CAATGTGGGACGATCTCGGT---------CGAGGGACAG---------------TGGCTCC----CATTCCSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
........................................................................................................................................................C---------------A----------------------GCAGCAGCAGCAACAGC---------------AGCA..................................................................................................................................................................................................................................................................................23200.102011000
........................................................................................................................................................................................................GCAACAGC---------------AGCAGCA---ACAACAACAGC.................................................................................................................................................................................................................................................................26110.091010000
.........................................................................................................................................................................................................................................ACAACAACAGCAACAACAG---------CAGC............................................................................................................................................................................................................................................23110.091001000
.........................................................................................................................................................................................................................................................................................................................................................................GCA--------GCAAC---------------AACAGCAACAGC.................................................................................................20200.051010000
...................................................................................................................................................................................................................................................CAACAACAG---------CAGCAGC---AGCA-----------------------A---.......................................................................................................................................................................................................21200.051001000
...............................................................................................................................................................................................................................AGCAGCA---ACAACAACAGCAA...............................................................................................................................................................................................................................................................20200.051010000
...........................................................................................................................................................................................................................................AACAACAGCAACAACAG---------CAGC............................................................................................................................................................................................................................................21200.051010000
...........................................................................................................................................................................................................ACAGC---------------AGCAGCA---ACAACA......................................................................................................................................................................................................................................................................18200.051010000
................................................................................................................................................................................................CAGCAGCAGCAACAGC---------------AGCA..................................................................................................................................................................................................................................................................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................GCA--------GCAAC---------------AACAGCAACAGCA................................................................................................21200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................A--------GCAAC---------------AACAGCAACAGCA................................................................................................19200.051001000
.................................................................................................................................................................................................................................................AGCAACAACAG---------CAGCAGC---AGC...................................................................................................................................................................................................................................21200.051000010
........................................................................................................................................................................A----------------------GCAGCAGCAGCAACAGC---------------AGCAG.................................................................................................................................................................................................................................................................................23200.051010000
........................................................................................................................................................................................................................................................................................................................................................................AGCA--------GCAAC---------------AACAGCAACA...................................................................................................19200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................AAC---------------AACAGCAACAGCAA------CA--.....................................................................................19200.051010000
droAna3
TCACG------GCT--CTGCAG-------CAGCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGCAGCAGCAGCA---------GCAGCAGC---A----------------------CAG---CC---------AGGCGCA---GCAGCAA------CAGCAA---------CAGCAGC---AGCA-----------------------A---C------AACAC---CAT------------------------------CAC------CAGCA--------GCAAC---------------AGCAGCAGCA--------------CATGTACCACGCTGCAGT----------------------GGCTGCCCACCAGCAGCAGTT---------------GTTGCAACASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACGCTGCAGT----------------------GGCTGCCCACCAGC...............................2712.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA--------------CATGTACCACGCTGCAGT----------------------GGCT.........................................2911.001010000
............................................................................................................................................................................GCAGCAGC---A----------------------CAG---CC---------AGGCGCA---............................................................................................................................................................................................................................................................................2111.001001000
......................................................................................................................................................................................................................................................................AGCAGC---AGCA-----------------------A---C------AACAC---CAT------------------------------CAC------CA............................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................A---------CAGCAGC---AGCA-----------------------A---C------AACAC---CAT------------------------------.......................................................................................................................................................2220.501010000
......................................................................................................................................................................................................................................................CAGCAA---------CAGCAGC---AGCA-----------------------A---C------AACA............................................................................................................................................................................................23200.102000002
.....................................................................................................................................................................................................................................................................CAGCAGC---AGCA-----------------------A---C------AACAC---C.......................................................................................................................................................................................19110.091010000
..................................GC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................29170.061010000
.................................................................................................................................................ACAACAGCAGCAGCAGCA---------GCA......................................................................................................................................................................................................................................................................................................................................21200.051000001
................................CAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAAC...............................................................................................................................................................................................................................................................................................................................................................19200.051010000
...........................................GC------------------------------------------------------------------------------AGCAACA---------------ACAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................23200.051010000
............................................................................................................................GCAACA---------------ACAACAGCAGCAGCAGCA---------.........................................................................................................................................................................................................................................................................................................................................24200.051000001
..............................AGCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGC............................................................................................................................................................................................................................................................................................................................................................24200.051010000
............................................C------------------------------------------------------------------------------AGCAACA---------------ACAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................22200.051100000
.....................G-------CAGCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGC............................................................................................................................................................................................................................................................................................................................................................26200.051100000
...............................GCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................24200.051010000
.................................AGC------AGC------------------------------------------------------------------------------AGCAACA---------------ACAAC...............................................................................................................................................................................................................................................................................................................................................................18200.051010000
............................................................................................................................GCAACA---------------ACAACAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................23200.051010000
..................GCAG-------CAGCAGC------AGC------------------------------------------------------------------------------AGCAACA---------------....................................................................................................................................................................................................................................................................................................................................................................21200.051000010
droBip1
AGCCC------ACG--CAACAGCAG----CAGCAGC------AGGTG----CAGCAATT-----------------------------------------------------------GCAGCAGCAAGT---------------GCAACA---G---------TTGCAACAGCAGCAGCAACAGTTGCTG----------------C---------------AGCAACA---ACAGCAGCAGCAGCAACAA---------CAACAGC---AGCA-----------------------G---C------ATCAG---CCA------------------------------CAGCAGCAACAACAACGACCAC--CGCC------TAC---------GCATC---------------------------------------------------------------------TGCACGA---------------GCAGCAGCTSizeHit CountTotal NormTotal
No Reads
droKik1
G--CAGCACCAGCA-------GAAG----CAGCACC------AG-------CAGCA---GCA--------------------------------------------------------GCACCAGCAGC------------------------------AGCAGCACCAGCAGCAGCAGC-------------------------ACC---------------ACCAGCA---GCAGCA---GCAACAACAG---------CAG---C---AGCA-----------------------GCAACAGCAGCA---G---CAG------------------------------CAC------CAACA-----------------------------GCAGCAACAGCACCAGCTGCA--------------------GCA---TCA----------CAACAACAAC-AACAG---------------CAGCAG----TCTTTCCSizeHit CountTotal NormTotal
No Reads
droFic1
AGCCG------ACG--TCGCAG-------CAACAAC------AGC--AACA--------GCAGCATCAGCA-----------------------------------------------GCAACT------------------------------CC---TGCAG------CAGCAGCAGCAACT-------------------CCAGC---------------AGCA---------GCA---GCAACAACAGCAGCAGCAACTG---C---TGCA---GCAACAGCAGCAACAACA--G---C------AACTG---TTG---------------------------------------CAACAGCA-----GCAAC---------------TGCTGCAGCAG-----------------------------------------------------CAGCAAC-------------TCCAGCAGCAACCTTCGCTGCACGCSizeHit CountTotal NormTotal
No Reads
droEle1
A--CAACGGCAGCC--CAGCAG-------CAGCAAC------AT---------------------------------------------------------------------------------CAGCA---------------GC------------AGCAACA-------------------------GCAGCAGCAGCAACAGC---------------AGCAGCA---GCAACAGCAGCAACAGCAG---------CAGCAGC---AACA-----------------------A---C------ATCAA---CAG------------------------------CAA------CAACA--------GCAAC---------------ATCACCAGCAGCAA-----------C----------------------------------------------------TGCAACAT--GCTGCTGCTGC-ACTGCATCCSizeHit CountTotal NormTotal
No Reads
droRho1
AGCAA------ATT--CAACAACAGCAG-CAACAAC------A---------------------------------------------------------------------------------GCAGCAGCAACAACAACAGCA---------GC---AGCAAC------AACAGCAGC----------------------------AGCAACAACAGCAGCAGCAA------------------CAACAA---------CAGCAGC---AGCA-----------------------A---C------AACAG---CAGCAGCAACAACAACAGCAGCAGCAACAACAACAGCAGCAGCAAC-----------------------------AACAGCAGC---------------------------------------------------------------------AGCAACA---------------ACAGCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGGCA------ATT-------ACAG----CTGCGAC------AA------------------------------------------------------------------------CGGCAGCAACATGC---AAT---------GCC---------------ACA------GCA----------------GCAGCAACAACATCCTC---------------GGCAGCA---GCAGCAACAGCCACATCAG---------CAGCAGC---AGCA-----------------------A---C------ACCAA---CAA------------------------------CAT------CCACA-----A--ACAAC---------------GACAACAACAGCGA------TA--ACTTTG--------CAAT----------------------GGACGCC----AGTGA------------AATC----GCCACTTTCSizeHit CountTotal NormTotal
No Reads
droTak1
GAGCA------GCA-------GCAG----CAGCGCC------AG------------------------------------------------------------------------CAGCAGCAGCAACT---------------GCAGCA------------------GCACCGCGAGCAGCA-------------------GCACC---------------ACCAGCA---GCAGCAG---------------------CAG---C---GCGA------GCAACAGC------AGC--AGC------ACCGCGAGCAG------------------------------CAG------CAACA--------GCAAC---------------ACCAGCAGCAGTCC--------------AG----CGAGAAGAGTCCGCCCACCTCGTC---CGCCGC-----AGCC---------------GCCGCCGCCTCTTCCTCCSizeHit CountTotal NormTotal
No Reads
droEug1
CGGCG------GCATACACCAG-------CAGCATC------AGC--AACA--------GCA--------------------------------------------------------GCACCAGCA------GCA---A---CA---------AC---AGCAA------CAACATCAGCAACA-------------------ACAGC---------------ATCA---------GCA---GCAACAACACCACCAGCAGCAG---C------AACACCACCAACAGC------AGC--AAC------ACCAC---CAA------------------------------CAG------CAACAAC--------ATCTAC------------AACAGCAGC---------------------------------------------------------------------AGCAGCA---------------ACACCAGCASizeHit CountTotal NormTotal
No Reads
dm3
G--CA------GCA-------CCACCACACAGCA-GCGCAGCACTAC----CACCACAG-----------------------------------------------------------CCACCAGACAGC---------------GCACCA---C---------CAGCAGCAGCAACAGCAGCA----------------------CC---------------ACCAGCA---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--AGGCACAGCAGCAGCA--------------------------CCTGAG--------C----------------------CACCACCACC----ACCACCATCA---------------TCACCATCASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.............................................AC----CACCACAG-----------------------------------------------------------CCACCAGACAGC---------------....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGC--AGGCACAG.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA--------------------------CCTGAG--------C----------------------CA..............................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GACAGC---------------GCACCA---C---------CAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CA-GCGCAGCACTAC----CACCACAG-----------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CAG-----------------------------------------------------------CCACCAGACAGC---------------GCAC................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CA---C---------CAGCAGCAGCAACAGCAGCA----------------------CC---------------......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACCACACAGCA-GCGCAGCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................ACAG-----------------------------------------------------------CCACCAGACAGC---------------GCACC...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CACAGCAGCAGCA--------------------------CCTGAG--------C----------------------C...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................CACACAGCA-GCGCAGCACTAC----CACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................CCA---C---------CAGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................2070.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GCA---GCAACAA------CAGCAA---------CAGCAGC---A.....................................................................................................................................................................................................................................24180.3970000000000000000000000000000000000000000000000000000000000000000000000000000000010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................C---------------ACCAGCA---GCAACAA------CAGCAA---------CAGC............................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAAC....................................................................................................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCAGCA----------------------CC---------------ACCAGCA---GCAA........................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAA.....................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................A---GCAACAA------CAGCAA---------CAGCAGC---......................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
..............................................................................................................................................................................................................CC---------------ACCAGCA---GCAACAA------CAGCC..........................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCAGCA----------------------CC---------------ACCAGCA---GCA.........................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGCAGCAGCAACAGCAGCA----------------------CC---------------......................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AGCA---GCAACAA------CAGCAA---------CA..............................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CA............................................................................................................................................25180.1730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACA...................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A---GCAACAA------CAGCAA---------CAGCAGC---A.....................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................C---------------ACCAGCA---GCAACAA------CAG............................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................A---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--A..............................................................................................................................24190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------C.............................................................................................................................................23190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................................................A------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAAC..........................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................C---------CAGCAGCAGCAACAGCAGC..............................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------..............................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................................................A------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACA.........................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------C.............................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
......................................................................................................................................................................................................................................................CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACA.........................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GCAACAA------CAGCAA---------CAGCAGC---......................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................CACCA---C---------CAGCAGCAGCAACA...................................................................................................................................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................ACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAAC..........................................................................................................................................23130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GCA---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CA............................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................AGC---------------GCACCA---C---------CAGCAGGG.........................................................................................................................................................................................................................................................................................................................................18130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................ACCAGCA---GCAACAA------CAGC...........................................................................................................................................................................................................................................................18160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CA---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------C.............................................................................................................................................25160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................CA---GCAACAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------..............................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--...............................................................................................................................24190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--A..............................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--AG.............................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGC.......................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACA...................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................C---------CAGCAGCAGCAACAGCAGCA----------------------.......................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CAGCA---GCAACAA------CAGCAA---------CAGCAG..........................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AGCA---GCAACAA------CAGCAA---------CAGC............................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCA......................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACCACC----ACCACCATC.........................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAAC..........................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GCA---GCAACAA------CAGCAA---------CA..............................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------..............................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACA.........................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................CA---GCAACAA------CAGCAA---------CAGCAGC---......................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAAC..........................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CA---C---------CAGCAGCAGCAACAGCA................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAA...........................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--...............................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................A---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--...............................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................C---------CAGCAGCAGCAACAGCA................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAAC....................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AGC---AG--------------------------------------------------------------------------------------CAACAGCAACAGC--A..............................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CAGCA---GCAACAA------CAGCAA---------CAGCA...........................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAAC..........................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CAGCA---GCAACAA------CAGCAA---------CA..............................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GCA---GCAACAA------CAGCAA---------CAG.............................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAA.....................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAACAG..................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................A------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CA............................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AA------CAGCAA---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACA.........................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................A---------CAGCAGC---AG--------------------------------------------------------------------------------------CAACAGCAA.....................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CATCT------GCA-------CATG----CAGCATGCGCAACATCAT----CTGCACTTG-----------------------------------------------------------------------TCCCAT------CA---------GCAGGCGCAACA---GCAGCACATGCAACACTTGACA-------CA---GCAAC---------------AGCAGCA---GCAGCA---GCAACAACAA---------CAG---C---AGCA-----------------------GCAGC------AACAG------------------------------------CAGCAGCAGCAACA---ACAAC--AGCCGCAACAGCAGCAACA-----------------------------------------------TGA----------CTTCCTCAGC--------------------GCCGCCACCCTGCTGTCCSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................AGC------AACAG------------------------------------CAGCAGCAGCA............................................................................................................................................19200.05100000000000100000
.................................................................................................................................................................................................................................................................................CA-----------------------GCAGC------AACAG------------------------------------CAGCAGC................................................................................................................................................19200.05100000000001000000
...............................................................................................................................................................................................................................................................................AGCA-----------------------GCAGC------AACAG------------------------------------CAGCAGC................................................................................................................................................21200.05100000000000100000
..............................................................................................................................................................................................................................................A---GCAACAACAA---------CAG---C---AGCA-----------------------GCAGC------................................................................................................................................................................................................24200.05100000000000100000
.........................................................................................................................................................................................................................................................................................................................G------------------------------------CAGCAGCAGCAACA---ACAAC--A..............................................................................................................................21200.05100000000000100000
..........................................................................................................................................................................................................................................................AA---------CAG---C---AGCA-----------------------GCAGC------AACAG------------------------------------C......................................................................................................................................................21200.05100000000000100000
droSec2
G--CAGCA---GCA-------GCAG----CATCAGC------A---------------------------------------------------------------------------GCAACTGCAGTT---------------GCAACA---ACAGCAGCAGCAGCAGCAACAGTTGC-------------------------------------------AGCTGCA---ACACCAACAGCATCAACAG---------CAGCAGC---AGCA-----------------------T---C------AACAG---CAA------------------------------CAT------CAACA--------GCAGC---------------A---GCAACAACATCAGGCGCT--------------------GCAG--------CTGTCGAC--GGATG-------------------------GCGG----GCAGGCGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.....................................................................................................................................................................................................................................................................................................................AACAG---CAA------------------------------CAT------CAACA--------GC...............................................................................................................................1830.3310010
...............................................................................................................................GTT---------------GCAACA---ACAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................2130.3310010
......................................................................................................................................................................................................................................................................................................................ACAG---CAA------------------------------CAT------CAACA--------GCAGC---------------.............................................................................................................2030.3310010
....................................................................................................................................................................................................................................................ATCAACAG---------CAGCAGC---AGCA-----------------------T---C------A...............................................................................................................................................................................................2260.1710010
........................................................................................................................................................................................................................................................................................................................AG---CAA------------------------------CAT------CAACA--------GCAGC---------------A---G........................................................................................................20130.0810010
.......................................................................................................................................................................................................................................................................................................................................................................CAACA--------GCAGC---------------A---GCAACAAC.................................................................................................19200.0510010
...................................................................................................................................................................................................................................................CATCAACAG---------CAGCAGC---AGC...................................................................................................................................................................................................................................19200.0510010
droYak3
CATCT------GCA-------CATG----CAGCAGGCGCAACATCAT----TTGCACTTG-----------------------------------------------------------------------TCGCAT------CA---------GCAGGCGCAACA---GCAGCACATGCAACACTTGACC----------------C---------------AGCAGCA---ACAGCAACAGCAACAACAG---------CAGCAGC---AGCA-----------------------A---C------AACAG---CAA------------------------------CAGCAGCAACAACAGCAACAAC--AGCCGCAACAGCAGCAACA-----------------------------------------------TGA----------CTTCCTCAGC--------------------GCCGCCGCCCTGCTGTCCSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................................................................................................................................................................................GCA---ACAGCAACAGCAACAACAG---------CAGCA...........................................................................................................................................................................................................................................2740.25101000000000
................................................................................................................................................................................................................................GCAGCA---ACAGCAACAGCAACA.............................................................................................................................................................................................................................................................21200.10201100000000
..............................................................................................................................................................................................................................................AACAGCAACAACAG---------CAGCAGC---AGC...................................................................................................................................................................................................................................24190.05100010000000
..............................................................................................................................................................................................................................................AACAGCAACAACAG---------CAGCAGC---......................................................................................................................................................................................................................................21200.05101000000000
................................................................................................................................................................................................................................................CAGCAACAACAG---------CAGCAGC---A.....................................................................................................................................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................CA-----------------------A---C------AACAG---CAA------------------------------CAGC...................................................................................................................................................16200.05100000000001
.............................................................................................................................................................................................................................................CAACAGCAACAACAG---------CAGCA...........................................................................................................................................................................................................................................20200.05101000000000
................................................................................................................................................................................................................................................................................GCA-----------------------A---C------AACAG---CAA------------------------------CAGCAGC................................................................................................................................................20200.05101000000000
..........................................................................................................................................................................................................................................................................................................A---C------AACAG---CAA------------------------------CAGCAGCAAC.............................................................................................................................................20200.05100000100000
.....................................................................................................................................................................................................................................................ACAACAG---------CAGCAGC---AGCA-----------------------A---C------................................................................................................................................................................................................20200.05101000000000
.....................................................................................................................................................................................................................................................ACAACAG---------CAGCAGC---AGCA-----------------------A---C------AAC.............................................................................................................................................................................................23200.05100100000000
droEre2
AACCC------------CATGT-------GGCCATGCGCGACCTCAA---------------------GCAGCGCCTCTTCGATCTGCTGCGCTCCGGCGGCAACAGTAATGGCAACAGCAGCAACAT---------------CA---------------------------GCA-------------------------------GC---------------AGCAACA---ACAACAACAACAGCAACAA---------CAGCGGC---AGCA-----------------------A---C------GGCAG---CAG------------------------------CAG------CAACA--------CGAAC---------------AACAGCCACAATTC----------------------------GCA---TCA----------CAT--------------------------------------------CSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.........................................................................................................................................................................................................................................ACAACAACAACAGCAACAA---------CAGC............................................................................................................................................................................................................................................2370.1410100000
............................................................................................................................................................................GCA-------------------------------GC---------------AGCAACA---ACAACAACAACAGC..............................................................................................................................................................................................................................................................2670.1411000000
..............................................................................................................................................................................A-------------------------------GC---------------AGCAACA---ACAACAACAACAGC..............................................................................................................................................................................................................................................................2490.1110001000
.............................................................................................................................CAT---------------CA---------------------------GCA-------------------------------GC---------------AGCAACA---ACA.........................................................................................................................................................................................................................................................................20100.1010000010
............................................................................................................................ACAT---------------CA---------------------------GCA-------------------------------GC---------------AGCAACA---A...........................................................................................................................................................................................................................................................................19120.0811000000
..............................................................................................................................................................................A-------------------------------GC---------------AGCAACA---ACAACAACAAC.................................................................................................................................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................AACA---ACAACAACAACAGCAAC...........................................................................................................................................................................................................................................................21200.0510100000
.............................................................................................................................................................................................................................................CAACAACAGCAACAA---------CAGC............................................................................................................................................................................................................................................19200.0510100000
...............................................................................................................................................CA---------------------------GCA-------------------------------GC---------------AGCAACA---ACAACA......................................................................................................................................................................................................................................................................20200.0510000010

Generated: 05/17/2015 at 11:55 PM