ID:

dmo_1193

 Coordinate:

scaffold_6496:17863482-17863750 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.0 -7.2

Flybase annnotation

CDS [Dmoj\GI18685-cds]; exon [dmoj_GLEANR_3626:2]; exon [dmoj_GLEANR_3626:1]; CDS [Dmoj\GI18685-cds]; intron [Dmoj\GI18685-in]

Repeatable elements

NameClassFamilyStrand
GA-richLow_complexityLow_complexity+
TART_DVLINEJockey-
mature
  1. scaffold_6328:1743054-1743076 -
  2. dmo_1193  scaffold_6496:17863513-17863535 -
star
  1. scaffold_6308:1957056-1957084 -
  2. scaffold_6328:1496218-1496246 +
  3. scaffold_6328:2997548-2997576 +
  4. scaffold_6473:2067542-2067570 +
  5. dmo_986  scaffold_6496:5660461-5660489 +
  6. scaffold_6496:6693524-6693552 +
  7. scaffold_6496:11673479-11673507 -
  8. scaffold_6496:14106743-14106771 -
  9. dmo_1193  scaffold_6496:17863590-17863618 -
  10. scaffold_6500:9331610-9331638 -
  11. scaffold_6540:5318149-5318177 -
  12. scaffold_6540:6148436-6148464 +
  13. scaffold_6540:10145869-10145897 +
  14. scaffold_6540:17649141-17649169 +
  15. scaffold_6540:21415954-21415982 +
  16. scaffold_6540:23970305-23970333 -
  17. scaffold_6540:24483600-24483628 -
  18. scaffold_6540:30037518-30037546 +
  19. scaffold_6540:31039867-31039895 -
  20. scaffold_6680:4420289-4420317 +

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCCGAGGGCTGCGAGGACTCTGCCGGTGCCGCTGAATCCACAACTCACAGTNNNNNNNNNNNNNNNNNNNNNNNNNAACAACAACAACAACAGCAGCGTCAGCAATAATAATAATAATAACAATAACAACAACAATACCAAAATGGCAAGCATTGATATGCAGCAGCAGTAGCAATAACAACAACAGCAGCAGCAACAACAACAACAGCAACAATAACAATGCAAACAGCAGCAGCAGCTCATCATCATCCTCCTCCTCGTGCTCCTCCTCCTCGTCCAGCTCGTCGGCCAGCACTCTAACAAGCTGCACTACCGCAGCCATCGTGCCCTCGAACTGCTCCACAAATGCCAACAAGTCGCCCAGCTCG
**************************************************************************************************************************************************************************************.......................................((...(((((((.((((.......................)))).))............))).))))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M060
embryo
.........................................................................................................................................................................................................................................................................CCTCCTCCTCGTCCAGCTCGTCG................................................................................. 23 0 2 0.50 1 1 0
...............................................................................CAACAACAACCTCAGCAGCGT............................................................................................................................................................................................................................................................................. 21 2 16 0.06 1 1 0
......................................................................................................................................................................................CAACAGCAGCAGCAACAACAACAACAGCA.............................................................................................................................................................. 29 0 20 0.05 1 0 1

Anti-sense strand reads

CCGGCTCCCGACGCTCCTGAGACGGCCACGGCGACTTAGGTGTTGAGTGTCANNNNNNNNNNNNNNNNNNNNNNNNNTTGTTGTTGTTGTTGTCGTCGCAGTCGTTATTATTATTATTATTGTTATTGTTGTTGTTATGGTTTTACCGTTCGTAACTATACGTCGTCGTCATCGTTATTGTTGTTGTCGTCGTCGTTGTTGTTGTTGTCGTTGTTATTGTTACGTTTGTCGTCGTCGTCGAGTAGTAGTAGGAGGAGGAGCACGAGGAGGAGGAGCAGGTCGAGCAGCCGGTCGTGAGATTGTTCGACGTGATGGCGTCGGTAGCACGGGAGCTTGACGAGGTGTTTACGGTTGTTCAGCGGGTCGAGC
*********************************************************************************.......................................((...(((((((.((((.......................)))).))............))).))))************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 M060
embryo
 V049
head
.......................................................................................................................................................................................................................................................................................................GAGATGGTTCGACTCGATG....................................................... 19 3 20 6.05 121 47 73 0 0 1
........................................................................................................................................................................................................................................................................................................AGATTGGTCGACTTGATGG...................................................... 19 2 2 1.50 3 3 0 0 0 0
....................................................................................................................................................................................................................................................................................................CGTAAGATTGGTCGACTTGATG....................................................... 22 3 3 0.33 1 1 0 0 0 0
...........CGCTCTTGAGACGGACACGAC................................................................................................................................................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................................................................GAGGGGTTTACGGTTGTGCC........... 20 3 4 0.25 1 0 0 0 1 0
.......................................................................................................................................................................................................................................................................GAGGGGGTGGAGCAGGTCGAG..................................................................................... 21 2 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................AGATTGGTCGACTTGATGGT..................................................... 20 3 9 0.11 1 0 1 0 0 0
.......................................................................................................................TTGTTATTTATGTTGTTATCGTTTT................................................................................................................................................................................................................................. 25 3 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................................................................................................................................CAGGTCGCGCAGACGGTC............................................................................ 18 2 10 0.10 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................CGGCCGTGAGATTGGTTGA.............................................................. 19 3 13 0.08 1 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................AGATTGGTCGACTTGATG....................................................... 18 2 17 0.06 1 1 0 0 0 0
...............................................................................................................................................................................................GTCGTTGTTGTTGTTGTCGTTG............................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................GAGAAGGAGCAGGTAGGGC.................................................................................... 19 3 20 0.05 1 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................ACGGGGGCTTGAAGAG............................ 16 2 20 0.05 1 0 0 1 0 0
.................................................................................................................................................................................................................................................GTAGTAGTAGGAGGAGTA.............................................................................................................. 18 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:17863432-17863800 - dmo_1193 GGCCGAGGGCTGCGAGGACTCTGCCGGTGCCGCTGAATCCACAACTCACAGTNNNNNNNNNNNNNNNNNNNNNNNNNAACAACAACAACAACAGCAGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATAATAATAAT------A---ATAACAATAACAACAACAATACCAAAATGGCAAGCATTGATATGCAGCAGCAGTAGCA---A---------------------------------------------TAACAACAACAGCAGCAGCAACAACA---------ACAACAGCAACAAT---AAC------AATGCAAACA---GCAGCAGCAG-----CTCATCATCATCCTCCTCC---------TCGTGCTCC------TCCTCCTCGTCCAGCTCG------------TCGGCCAGCACTCTAACAAGCTGCA---CTACCGCAGCCATCGTGCCCTCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------AGCTCG
droVir3 scaffold_12875:9270697-9270973 + C----------------------------------------------------------------------------AACAA---CAACAACAGCGCCGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAATAAC------A---ACAACAACAACAACAACAATACCAAAATG-CAAGCATTGATATGCAGCAGCAGCAGCA---A---------------------------------------------CAATAATAACAGTAGCAACAATAACA---------ACAACA------GC---AAT---------GCCAACA---GCAGCAGCAG-----CTC---------ATCATCATCCTCCTCCTCATGCTCATCTAG------CTCGTCCAGCTCG------------TCGGCCAGCACTTTGACCAGCTGCA---CCACCGCGGCCGTAGTGCCCTCCAATTGCTCCACAAATGCCAACAAGTCGCC---C------GGTTCG
droGri2 scaffold_15245:2575852-2576191 + C----------------------------------------------------------------------------AACAA---CAACAATAGCACGACC---------------------------------------------------------------------------------------------------------------------------------------------AGCA------------ACAAT---AATAACAACAAC------A---GCAACAACAATAACATCAATACCAAAATG-CAAGCATTGATCTGCACCGGCAGCAACA---GTAACAACAGCAACAACAACAACAATAATTCCAGCAACAGCAGTAACAACAACAACAACAACAACAACAACAGCAGCA---------------GC---AGCAACAACAATGCCAACA---GCAGCAGCAG-----CTCATCATCCTCATCCTCG---------TCATGCTCATCCACC------TCGTCCAGTTCG------------TCGGCGAGCACTTTAACCAGCTGCA---CCACAGCGGCCATAGTGCCCTCGAATAGCTCCACAAATGCCAACAAGTCACC---C------GATTCG
droWil2 scf2_1100000004514:661518-661886 + AA-----------------------------------------------------------------------------CAGTAATACCAATACCAATTCCAACAACAATAACAATAATAACAACAACAACAACAATAACTCCGCTGCAGCGGACAATAGCATTGTGAAGCGTGAGTTTTGCGATGGAAGTATATTGCCAGGTGTTGGGGCAG---------------------GCGCTAC---------------------C---AACAATAATAAT------A---GCAACAACAACAACAACAATCCAAAAATG-CAGACCA------ACAACAAGA---------------------------------------------------------------------------------CAAGTA---------------GC---GGC---------AGTGGCAATAGTAGCAGCAGC--TCCTCATCATCATCATCATCG---------TCTTGTTCCTCAA---CATCATCGTCCAGCTCA------------TCGACCAGCACCTTAACCAGTTGCA---CCACCGCAGCCATAGTGCCCTCCCAATGCTCCACAAATGCCAACAAATCGCC---C------GGTTCA
dp5 3:2216827-2217133 + C----------------------------------------------------------------------------AAC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAACAACAACAACAACAGC------A---ACAATAACAACAACAACAATACCAAAATT-CAGTCACTGATTTGCACTGGAAGCAACA---A---------------------------------------------CAACAACAACAATAGCAGTAGCAATA---------GCAATAGCAATAGC---AAA---------AAGAACA---ACAGCAGCAG-----CTCATCCTCGTCATCGTCG---------TCGTGCTCCTCGAGCTCATCCTCCTCCAGCTCTGCCTCCGCCTCTGCCGCCAGCACCCACACCAGCTGCACAACCACCGCCGCCGTAGTGCCATCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------GGATCG
droPer2 scaffold_2:2388244-2388552 + AA-----------------------------------------------------------------------------CAA---CAACAATAGTACTACC---------------------------------------------------------------------------------------------------------------------------------------------AACA------------ACAACAACAACAACAACAGC------A---ACAATAACAACAACAACAATACCAAAATT-CAGTCACTGATTTGCACTGGAAGCAACA---A---------------------------------------------CAAAAACAACAATAGCAGTAGCAATA---------GCAATA------GC---AAA---------AAGAACA---ACAGCAGCAG-----CTCATCCTCGTCATCGTCG---------TCGTGCTCCTCGAGCTCATCCTCCTCCAGCTCTGCCTCCGCCTCTGCCGCCAGCACCCACACCAGCTGCACAACCACCGCCGCCGTAGTGCCATCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------GGATCG
droAna3 scaffold_13266:1760029-1760305 - C----------------------------------------------------------------------------AAC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAACAACAAC---AACAATAGTAGT------A---GCAATAACAACAACAATAATGCCAAATTG-CAGGCACTGATTTGCAAAAGCA---ACA---C---------------------------------------------TGCCAACAACAAT------------AGCAACA---------------GC---AAC---------AATAACAATAGTAGCAGCAG-----CTCATCGTCCTCATCGTCG---------TCCTGCTCCTCATCCTCCTCGTCATCCAGCTCA------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCTGCCGTCGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---CGGCTCCGTATCA
droBip1 scf7180000396730:2752001-2752298 - C----------------------------------------------------------------------------ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAACAA---CAACAACAACAATAGCAGTAGCAAT------A---ACAACAACAACAATAATAATACCAAATTG-CAGGCATTGATTTGCAAAAGCA---ACACTGC---------------------------------------------CAACAACAACAATAGCAACAGTAACA---------GCAACAGCAACAAT---AAC------------AACAACAGCAGCAGCAG-----CTCATCGTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCCTCGTCATCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTCGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---CGGCTCCGTATCG
droKik1 scf7180000302277:87416-87685 + AA-----------------------------------------------------------------------------TGC------------------------------------------------------------------------------------------------------------------------------------------------------CAATGCCACCAACAATAA---CA------AC---AATAATAATAAC------A---ATAGCAGCAACAACAACAATACCAAATTG-CAGGCGATGATCTGCAACAAGA---------------------------------------------------------------------------------GCAACAATAGCA---------GCAACACA------------AACA---ACAGCAGCAG-----CTCATCCTCTTCATCATCA---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCA------------GCGACCAGCACTTTGACCAGCTGCA---CCACCGCCGCCGTTGTGCCCTCCAATTGCTCCACAAATGCCAACAAATCACCGCCAGGATCGGTATCA
droFic1 scf7180000453851:2101887-2102138 - AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAACAACAGCAGCAGCAACAACAACAACAACAATAATATCAACAATACCAAAATG-CAGGCAATGATATGCAACAAGG---------------------------------------------------------------------------------GCAGCA---------------GT---GCG------------AACA---ACAGCAGCAG-----CTCCTCGTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCCTCCTCCTCGAGCTCG------------GCGACCAGCACATTGACCAGCTGCA---CCACGGCCGCCGTGGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---G------GTGTCG
droEle1 scf7180000491240:1058737-1059004 + C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAATAACAACAGTAGTAGC------A---ACAACAACAACAACAACAATACCAAAATG-CAGGCTATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCACCAGCAACATCAACAGC---ACC---------AACAACA---ACAGCAGCAG-----CTCCTCGTCCTCATCGTCG---------TCGTGCTCGTCATCCTCATCATCCTCCAGTTCG------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAATTGCTCCACCAATGCCAACAAATCGCC---G------GTTTCG
droRho1 scf7180000770177:353430-353679 + C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAACAACAATAACTACAACAACAGTAGT---------A---GCAACAACAATAACAACAATACCAAAATG-CAGGCATTGATATGCAACAAAG---------------------------------------------------------------------------------GGGGCA---------------GC---ACC------------AACA---ACAGCAGCAG-----CTCCTCGTCCTCATCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACTCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACCAATGCCAACAAATCGCC---G------GTTTCG
droBia1 scf7180000302291:2103466-2103744 + AA-----------------------------------------------------------------------------CAA---TAATAATGCCAGCGCC------------------------------------------------------------------------------------------------------------------------------------------ACCAACAATAA---CAATAACAACAACAACAGCAGT---------------AGCAACAACAATAACAATACCAAAATG-CAGGCAATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCGGCAGCAC------GGGC---AAC---------AACAACA---ACAGCAGCAGC--TCCTCCTCCTCCTCGTCGTCG---------TCCTGCTCCTCGTCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACCCTGACGAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAATCGCC---G------GTCTCC
droTak1 scf7180000415627:109557-109925 + AG-----------------------------------------------------------------------------CAGCAACAGCAGCAGCAACATCGGCGGCAATACCGGCAGCAACAACGGCAGCAAC---------------------------ATTGTGAAGCGCGAGTTTTGCGATGGTAGCCTGATGCCTGGTGCCGGGGCAAGTGTTAACAATAATAATGCCAGCGCCACCAACAATAATAACAAC---------AACAATAACAAC------A---GTAGTAGCAACAATAACAATACCAAAATG-CAGGCAATGATATGCAACAAGA---------------------------------------------------------------------------------GCAG---------------------------------------CA---ACAGCACCAG-----CTCCTCCTCCTCATCGTCG---------TCCTGCTCCTCCTCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAATTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCC
droEug1 scf7180000407691:102162-102426 + C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAACAGCAGTAGCAACAAC------A---ACAACAACAACAATAATAATACCAAAATG-CAGGCAATGATCTGCAACAAAA---------------------------------------------------------------------------------GCAGCAACAGCAA------CAGC---ACC---------AACAACAACAACAGCAGCAG-----CTCATCCTCCTCATCATCA---------TCCTGCTCCTCATCATCATCATCCTCCAGTTCG------------GCCACCAGCACCTTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCAAATTGCTCCACGAATGCCAATAAATCGCC---A------GTATCG
dm3 chr2R:4235332-4235574 + AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCAGCAGCAAC------A---ATAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCATCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCTTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCG
droSim2 2r:5053882-5054124 + AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCAGCAGCAAC------A---ACAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---GCG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCG
droSec2 scaffold_1:1881397-1881672 + AG-----------------------------------------------------------------------------TGT---------------------------------------------------------------------------------------------------------------------------------------CAACAATAACAATGCCAACGCCACCAACAACAA---CAATAACAACAGCAGCAGCGGCAAC------A---ACAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GT---GCG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTATCG
droYak3 2L:16890871-16891122 + AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCACCAGCAGCAACAACAATAATAATAACAACAACAACAATACCAAAATG-CAGACCATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---GCC------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCG
droEre2 scaffold_4929:18397501-18397753 - C----------------------------------------------------------------------------AACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACGGCAGCAGCAGCAGCAACAACA---ATAACAACAACAACAACAATACCAAAATA-CAGGCCATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG---------AACAACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCCTCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACCAATGCCAACAAGTCGCC---G------GTCTCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGCCGAGGGCTGCGAGGACTCTGCCGGTGCCGCTGAATCCACAACTCACAGTNNNNNNNNNNNNNNNNNNNNNNNNNAACAACAACAACAACAGCAGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATAATAATAAT------A---ATAACAATAACAACAACAATACCAAAATGGCAAGCATTGATATGCAGCAGCAGTAGCA---A---------------------------------------------TAACAACAACAGCAGCAGCAACAACA---------ACAACAGCAACAAT---AAC------AATGCAAACA---GCAGCAGCAG-----CTCATCATCATCCTCCTCC---------TCGTGCTCC------TCCTCCTCGTCCAGCTCG------------TCGGCCAGCACTCTAACAAGCTGCA---CTACCGCAGCCATCGTGCCCTCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------AGCTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------TCCTCCTCGTCCAGCTCG------------TCG.............................................................................................2320.501000100
.................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAACA---------ACAACAGCA......................................................................................................................................................................................................................29200.051000010
droVir3
C----------------------------------------------------------------------------AACAA---CAACAACAGCGCCGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAATAAC------A---ACAACAACAACAACAACAATACCAAAATG-CAAGCATTGATATGCAGCAGCAGCAGCA---A---------------------------------------------CAATAATAACAGTAGCAACAATAACA---------ACAACA------GC---AAT---------GCCAACA---GCAGCAGCAG-----CTC---------ATCATCATCCTCCTCCTCATGCTCATCTAG------CTCGTCCAGCTCG------------TCGGCCAGCACTTTGACCAGCTGCA---CCACCGCGGCCGTAGTGCCCTCCAATTGCTCCACAAATGCCAACAAGTCGCC---C------GGTTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCAGCTCG------------TCGGCCAGC.......................................................................................2120.501000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................CAATAAC------A---ACAACAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CAATAAC------A---ACAACAACAACAACAA.............................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATAAC------A---ACAACAACAACAACAACA...........................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
C----------------------------------------------------------------------------AACAA---CAACAATAGCACGACC---------------------------------------------------------------------------------------------------------------------------------------------AGCA------------ACAAT---AATAACAACAAC------A---GCAACAACAATAACATCAATACCAAAATG-CAAGCATTGATCTGCACCGGCAGCAACA---GTAACAACAGCAACAACAACAACAATAATTCCAGCAACAGCAGTAACAACAACAACAACAACAACAACAACAGCAGCA---------------GC---AGCAACAACAATGCCAACA---GCAGCAGCAG-----CTCATCATCCTCATCCTCG---------TCATGCTCATCCACC------TCGTCCAGTTCG------------TCGGCGAGCACTTTAACCAGCTGCA---CCACAGCGGCCATAGTGCCCTCGAATAGCTCCACAAATGCCAACAAGTCACC---C------GATTCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCA---------------GC---AGCA..........................................................................................................................................................................................................20200.15330
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCA---------------GC---AGCAACAACA....................................................................................................................................................................................................24200.10220
.............................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAACAACA........................................................................................................................................................................................................................................24200.10220
....................................................................................................................................................................................................................................................................................................................................................................................................GCAGTAACAACAACAACAACAACA.................................................................................................................................................................................................................................................24170.06110
..............................................................................................................................................................................................................................................................................ACAACAAC------A---GCAACAACAAT..................................................................................................................................................................................................................................................................................................................................................................20200.05101
.......................................................................................................................................................................................................................................................................................................................................................ACA---GTAACAACAGCAACAACA..............................................................................................................................................................................................................................................................................................21200.05110
droWil2
AA-----------------------------------------------------------------------------CAGTAATACCAATACCAATTCCAACAACAATAACAATAATAACAACAACAACAACAATAACTCCGCTGCAGCGGACAATAGCATTGTGAAGCGTGAGTTTTGCGATGGAAGTATATTGCCAGGTGTTGGGGCAG---------------------GCGCTAC---------------------C---AACAATAATAAT------A---GCAACAACAACAACAACAATCCAAAAATG-CAGACCA------ACAACAAGA---------------------------------------------------------------------------------CAAGTA---------------GC---GGC---------AGTGGCAATAGTAGCAGCAGC--TCCTCATCATCATCATCATCG---------TCTTGTTCCTCAA---CATCATCGTCCAGCTCA------------TCGACCAGCACCTTAACCAGTTGCA---CCACCGCAGCCATAGTGCCCTCCCAATGCTCCACAAATGCCAACAAATCGCC---C------GGTTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
C----------------------------------------------------------------------------AAC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAACAACAACAACAACAGC------A---ACAATAACAACAACAACAATACCAAAATT-CAGTCACTGATTTGCACTGGAAGCAACA---A---------------------------------------------CAACAACAACAATAGCAGTAGCAATA---------GCAATAGCAATAGC---AAA---------AAGAACA---ACAGCAGCAG-----CTCATCCTCGTCATCGTCG---------TCGTGCTCCTCGAGCTCATCCTCCTCCAGCTCTGCCTCCGCCTCTGCCGCCAGCACCCACACCAGCTGCACAACCACCGCCGCCGTAGTGCCATCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------GGATCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................ATAACAACAACAACAACAACAGC------.................................................................................................................................................................................................................................................................................................................................................................................2380.1310010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCATCGTCG---------TCG..........................................................................................................................................1690.1110000000001
........................................................................................................................................................................................................................................................................................................................................................CA---A---------------------------------------------CAACAACAACAATAGC..................................................................................................................................................................................................................................................19200.0510100000000
..............................................................................................................................................................................................................................................................AATAACAACAACAACAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droPer2
AA-----------------------------------------------------------------------------CAA---CAACAATAGTACTACC---------------------------------------------------------------------------------------------------------------------------------------------AACA------------ACAACAACAACAACAACAGC------A---ACAATAACAACAACAACAATACCAAAATT-CAGTCACTGATTTGCACTGGAAGCAACA---A---------------------------------------------CAAAAACAACAATAGCAGTAGCAATA---------GCAATA------GC---AAA---------AAGAACA---ACAGCAGCAG-----CTCATCCTCGTCATCGTCG---------TCGTGCTCCTCGAGCTCATCCTCCTCCAGCTCTGCCTCCGCCTCTGCCGCCAGCACCCACACCAGCTGCACAACCACCGCCGCCGTAGTGCCATCGAACTGCTCCACAAATGCCAACAAGTCGCC---C------GGATCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................AACA------------ACAACAACAACAACAACAGC------.................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droAna3
C----------------------------------------------------------------------------AAC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAACAACAAC---AACAATAGTAGT------A---GCAATAACAACAACAATAATGCCAAATTG-CAGGCACTGATTTGCAAAAGCA---ACA---C---------------------------------------------TGCCAACAACAAT------------AGCAACA---------------GC---AAC---------AATAACAATAGTAGCAGCAG-----CTCATCGTCCTCATCGTCG---------TCCTGCTCCTCATCCTCCTCGTCATCCAGCTCA------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCTGCCGTCGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---CGGCTCCGTATCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGTCATCCAGCTCA------------GCCACC..........................................................................................2311.001000001
..............................................................................AC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAACAACAAC---AACA...............................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
....................................................................................................................................................................................................................................................CAACAA---CAACAACAAC---AACAATA............................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
droBip1
C----------------------------------------------------------------------------ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAACAA---CAACAACAACAATAGCAGTAGCAAT------A---ACAACAACAACAATAATAATACCAAATTG-CAGGCATTGATTTGCAAAAGCA---ACACTGC---------------------------------------------CAACAACAACAATAGCAACAGTAACA---------GCAACAGCAACAAT---AAC------------AACAACAGCAGCAGCAG-----CTCATCGTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCCTCGTCATCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTCGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---CGGCTCCGTATCGSizeHit CountTotal NormTotal
No Reads
droKik1
AA-----------------------------------------------------------------------------TGC------------------------------------------------------------------------------------------------------------------------------------------------------CAATGCCACCAACAATAA---CA------AC---AATAATAATAAC------A---ATAGCAGCAACAACAACAATACCAAATTG-CAGGCGATGATCTGCAACAAGA---------------------------------------------------------------------------------GCAACAATAGCA---------GCAACACA------------AACA---ACAGCAGCAG-----CTCATCCTCTTCATCATCA---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCA------------GCGACCAGCACTTTGACCAGCTGCA---CCACCGCCGCCGTTGTGCCCTCCAATTGCTCCACAAATGCCAACAAATCACCGCCAGGATCGGTATCASizeHit CountTotal NormTotal
No Reads
droFic1
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAACAACAGCAGCAGCAACAACAACAACAACAATAATATCAACAATACCAAAATG-CAGGCAATGATATGCAACAAGG---------------------------------------------------------------------------------GCAGCA---------------GT---GCG------------AACA---ACAGCAGCAG-----CTCCTCGTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCCTCCTCCTCGAGCTCG------------GCGACCAGCACATTGACCAGCTGCA---CCACGGCCGCCGTGGTGCCCTCCAACTGCTCCACGAGTGCCAACAAGTCGCC---G------GTGTCGSizeHit CountTotal NormTotal
No Reads
droEle1
C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAATAACAACAGTAGTAGC------A---ACAACAACAACAACAACAATACCAAAATG-CAGGCTATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCACCAGCAACATCAACAGC---ACC---------AACAACA---ACAGCAGCAG-----CTCCTCGTCCTCATCGTCG---------TCGTGCTCGTCATCCTCATCATCCTCCAGTTCG------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAATTGCTCCACCAATGCCAACAAATCGCC---G------GTTTCGSizeHit CountTotal NormTotal
No Reads
droRho1
C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAACAACAATAACTACAACAACAGTAGT---------A---GCAACAACAATAACAACAATACCAAAATG-CAGGCATTGATATGCAACAAAG---------------------------------------------------------------------------------GGGGCA---------------GC---ACC------------AACA---ACAGCAGCAG-----CTCCTCGTCCTCATCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACTCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACCAATGCCAACAAATCGCC---G------GTTTCGSizeHit CountTotal NormTotal
No Reads
droBia1
AA-----------------------------------------------------------------------------CAA---TAATAATGCCAGCGCC------------------------------------------------------------------------------------------------------------------------------------------ACCAACAATAA---CAATAACAACAACAACAGCAGT---------------AGCAACAACAATAACAATACCAAAATG-CAGGCAATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCGGCAGCAC------GGGC---AAC---------AACAACA---ACAGCAGCAGC--TCCTCCTCCTCCTCGTCGTCG---------TCCTGCTCCTCGTCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACCCTGACGAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAATCGCC---G------GTCTCCSizeHit CountTotal NormTotal
No Reads
droTak1
AG-----------------------------------------------------------------------------CAGCAACAGCAGCAGCAACATCGGCGGCAATACCGGCAGCAACAACGGCAGCAAC---------------------------ATTGTGAAGCGCGAGTTTTGCGATGGTAGCCTGATGCCTGGTGCCGGGGCAAGTGTTAACAATAATAATGCCAGCGCCACCAACAATAATAACAAC---------AACAATAACAAC------A---GTAGTAGCAACAATAACAATACCAAAATG-CAGGCAATGATATGCAACAAGA---------------------------------------------------------------------------------GCAG---------------------------------------CA---ACAGCACCAG-----CTCCTCCTCCTCATCGTCG---------TCCTGCTCCTCCTCCTCGTCATCCTCCAGCTCG------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAATTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCCSizeHit CountTotal NormTotal
No Reads
droEug1
C----------------------------------------------------------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAA---CAATAACAACAGCAGTAGCAACAAC------A---ACAACAACAACAATAATAATACCAAAATG-CAGGCAATGATCTGCAACAAAA---------------------------------------------------------------------------------GCAGCAACAGCAA------CAGC---ACC---------AACAACAACAACAGCAGCAG-----CTCATCCTCCTCATCATCA---------TCCTGCTCCTCATCATCATCATCCTCCAGTTCG------------GCCACCAGCACCTTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCAAATTGCTCCACGAATGCCAATAAATCGCC---A------GTATCGSizeHit CountTotal NormTotal
No Reads
dm3
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCAGCAGCAAC------A---ATAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCATCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCTTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTGACCAGCTGCA---CCA.................................................................1912.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------A..............................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................GATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------AA.............................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGACCAGCTGCA---CCACC...............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGAATGCCAACAAGTCGCC---G------GTCTC.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCACGAATGCCAACAAGTCGCC---G------......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGGTGCCCTCCAACTGCTCCACGAA...............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGC...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................TGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------...............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TCCTCCTCGTCATCG---------TCCTG........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------...................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAATGCCAACAAGTCGCC---.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCTCCAGCTCC------------GCCACC..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------A..............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACAATAACAACAATACCA.....................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG------------AACA---ACAGCAGCAGCAG--C---TCCTCC...............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TAACAATAACAACAATACCAAA...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------GC---ACG------------AACA---ACAGCAGCAGCAG--C---TCC..................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------AACA---ACAGC...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................GCAGCAGCAAC------A---ATAATAACC....................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CAATAACAACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------------AACA---ACAGCAGCAGCAG--.........................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATAACAACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAAC------A---.............................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG------------AACA---G.......................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAAC------A---.............................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAAC------A---.............................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAAC------.................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................19110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................A---ATAATAACAATAACAACA...........................................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTCC------------GCCACCAGGC......................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAAC------.................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAAC------A---.............................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC------A---A............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC------.................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAGCAGCAG--C---TCG..................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---AG............................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCAGCAGCAAC------A---ACAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---GCG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC------A---AC...........................................................................................................................................................................................................................................................................................................................................................................22204.0581000008100000000000
....................................................................................................................................................................................................................................................................................................TAACAATAACAACAATACC......................................................................................................................................................................................................................................................................................................................................................1912.00200002000000000000
droSec2
AG-----------------------------------------------------------------------------TGT---------------------------------------------------------------------------------------------------------------------------------------CAACAATAACAATGCCAACGCCACCAACAACAA---CAATAACAACAGCAGCAGCGGCAAC------A---ACAATAACAATAACAACAATACCAAAATG-CAGGCCATGATATGCAACAAGA---------------------------------------------------------------------------------GCAGCA---------------GT---GCG------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTATCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGCACCAGCAGCAACAACAATAATAATAACAACAACAACAATACCAAAATG-CAGACCATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---GCC------------AACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCATCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACGAATGCCAACAAGTCGCC---G------GTCTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAGCAGCAGCAG--C---TCCT.................................................................................................................................................................2011.00101000000000
AA-----------------------------------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACAGCAGCAGCAG--C---T....................................................................................................................................................................1990.11100010000000
..................................................................................................................................................................................................................................................................................................AATAACAACAACAACAAT.........................................................................................................................................................................................................................................................................................................................................................18190.05101000000000
droEre2
C----------------------------------------------------------------------------AACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATAACAACGGCAGCAGCAGCAGCAACAACA---ATAACAACAACAACAACAATACCAAAATA-CAGGCCATGATATGCAGCAAGA---------------------------------------------------------------------------------GCAGCA---------------GC---ACG---------AACAACA---ACAGCAGCAGCAG--C---TCCTCCTCGTCGTCG---------TCCTGCTCCTCATCCTCGTCCTCCTCCAGCTCC------------GCCACCAGCACCCTGACCAGCTGCA---CCACCGCCGCCGTGGTGCCCTCCAACTGCTCCACCAATGCCAACAAGTCGCC---G------GTCTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................GCAGCAGCAACAACA---ATAAC........................................................................................................................................................................................................................................................................................................................................................................2050.2010100000
....................................................................................................................................................................................................................................................................AACGGCAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000

Generated: 05/17/2015 at 11:55 PM