ID:

dmo_1191

 Coordinate:

scaffold_6496:17679646-17679796 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.6 -40.4 -40.3

Flybase annnotation

exon [dmoj_GLEANR_3638:1]; CDS [Dmoj\Mal-A6-cds]; intron [Dmoj\Mal-A6-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCAATAGTTGGCTGGGCCAGATGCCAGCCGACCAAACGGCCAATTGGGTGGTGAGTCTCAAATGGAAGTAGGATTCAGAATTTGTTAGAGTGTGAGTGGGAGATTGCTCGACTGGGAAATACCCTGAGATCTGCGAAGAGCGACAATTTCACTCTTTGTAGGCTTCTTTTATGCGTAAATAGCTCACACACCCACACGCACGCTTGCATAGATGCTTATTGCGCAGCTTACACGCTGAGATTTTATTCAAG
**************************************************.(((((((............)))))))............(((((.(((((......((((...(((.....)))))))..((((((((((.((.....)).))))))))))(((..((........))..))).......))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
.............................GACCAAACGGCCAATTGGGT.......................................................................................................................................................................................................... 20 0 1 12.00 12 10 2 0 0
.CAATAGTTGGCTGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 28 0 1 10.00 10 9 1 0 0
.............................GACCAAACGGCCAATTGGGTGAT....................................................................................................................................................................................................... 23 1 1 7.00 7 6 1 0 0
.............................GACCAAACGGCCAATTGGGTGATGGGC................................................................................................................................................................................................... 27 3 1 7.00 7 7 0 0 0
.............................GACCAAACGGCCAATTGGGTG......................................................................................................................................................................................................... 21 0 1 5.00 5 5 0 0 0
...ATAGTTGGCTGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 26 0 1 4.00 4 4 0 0 0
..AATAGTTGGCTGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 27 0 1 4.00 4 4 0 0 0
............................CGACCAAACGGCCAATTGGGTG......................................................................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0
................................CAAACGGCCAATTGGGTGAT....................................................................................................................................................................................................... 20 1 1 3.00 3 1 2 0 0
.............................GACCAAACGGCCAATTGGGTGATGGG.................................................................................................................................................................................................... 26 2 1 3.00 3 3 0 0 0
............................CGACCAAACGGCCAATTGGGTGA........................................................................................................................................................................................................ 23 1 1 2.00 2 2 0 0 0
..AATAGTTGGCTGGGCCAGATGCCAGC............................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0
..........................GCCGACCAAACGGCCAATTGGGTGAT....................................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0
.............GGGCCAGATGCCAGCCGAC........................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0
.............................GACCAAACGGCCAATTGGGTGATG...................................................................................................................................................................................................... 24 1 1 2.00 2 1 1 0 0
.............GGGCCAGATGCCAGCCGACCAAACG..................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
.............................GACCAAACGGCCAATTGGG........................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0
.............................GACCAAACGGCCAATTGGGTGATGG..................................................................................................................................................................................................... 25 2 1 2.00 2 2 0 0 0
.............GGGCCAGATGCCAGCCGACCAAACGGCCA................................................................................................................................................................................................................. 29 0 1 2.00 2 2 0 0 0
............................CGACCAAACGGCCAATTGG............................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0
............................CGACCAAACGGCCAATTGGGT.......................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0
............................CGACCAAACGGCCAATTGGGTGATGGGC................................................................................................................................................................................................... 28 3 1 2.00 2 2 0 0 0
.................................AAACGGCCAATTGGGTGATGGGC................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0
...........................................................................................................................................GCGACAATTTCACTCTTTGTAGGC........................................................................................ 24 0 1 1.00 1 1 0 0 0
.TAATAGTTGGCTGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0
..AATAGTTGGCTGGGCCAGATGCCA................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................................TTACACGCTGAGATTTTATTCAAG 24 0 1 1.00 1 1 0 0 0
..AATAGTTGGCTGGGCCAGATGCC.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................................GCGACAATTTCACTCTTTGTAGGCTT...................................................................................... 26 0 1 1.00 1 1 0 0 0
.................................................................................................................................................ATTTCACTCTTTGTAGGCTT...................................................................................... 20 0 1 1.00 1 1 0 0 0
...............................CCAAACGGCCAATTGGGTGAT....................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
......GTTGGCTGGGCCAGATGCCA................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
...ATAGTTGGCTGGGCCAGATGC................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
............TGGGCCAGATGCCAGCCGACCAAAC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.CAATAGTTGGCGGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0
.TAATAGTTGGCTGGGCCAGATGCCAGC............................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
............TGGGCCAGATGCCAGCCGAC........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
............TGGGCCAGATGCCAGCCGACC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...............GCCAGATGCCAGCCGACCAAACG..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................AATACCCTGAGATCTGCGAAGA................................................................................................................ 22 0 1 1.00 1 1 0 0 0
.......................................................................................................................TACCCTGAGATCTGCGAAG................................................................................................................. 19 0 1 1.00 1 1 0 0 0
............................CGACCAAACGGCCAATTGGGTGATGGG.................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0
.............................GACCAAACGGCCAATTGGGTGA........................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0
...........................................................................................................................................GCGACAATTTCACTCTTTGTA........................................................................................... 21 0 1 1.00 1 1 0 0 0
.CAATAGTTGGCTGGGCCAGATG.................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
............................CGACCAAACGGCCAATCGGGTGA........................................................................................................................................................................................................ 23 2 1 1.00 1 0 1 0 0
...........................................................................................................................................GCGACAATTTCACTCTTTGTAGGCTTC..................................................................................... 27 0 1 1.00 1 1 0 0 0
...................................................................................................................GAAATACCCTGAGATCTGCGAAG................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...................................ACGGCCAATTGGGTGATGGG.................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0
...ATAGTTGGCTGGGCCAGATGCCA................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...................................................................................................................GAAATACCCTGAGATCTGCGAAGA................................................................................................................ 24 0 1 1.00 1 1 0 0 0
............................CGACCAAACGGCCAATTGGGTGATG...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
..............................................................................................AGTGGGAGAATGCTCGAC........................................................................................................................................... 18 1 1 1.00 1 0 0 1 0
.CAATAGTTGGCTGGGCCAGA...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
...............................CCAAACGGCCAATTGGGTGATGGGC................................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0 0
...ATAGTTGGCTGGGCCAGATGCCAGC............................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
................................CAAACGGCCAATTGGGTGATGGGC................................................................................................................................................................................................... 24 3 1 1.00 1 0 1 0 0
.................CAGATGCCAGCCGACCAAACGGC................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.............................GACCAAACGGCCAATTGGGTGGTGAGT................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
..................................................................................................................GGAAATACCCTGAGATCTGCGAAGA................................................................................................................ 25 0 1 1.00 1 1 0 0 0
TCAATAGTTGGCTGGGCCAGATGCCAGCC.............................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0
...........................................................................................GTGGGTGGGAGCTTGCTC.............................................................................................................................................. 18 2 5 0.60 3 3 0 0 0
........................................................................................................TGCTCGACTGGGAGATACCCTGAGA.......................................................................................................................... 25 1 9 0.11 1 1 0 0 0
............................................................................................TCAGGGGGAGAATGCTCGAC........................................................................................................................................... 20 3 19 0.05 1 0 0 0 1
.............................................................................................................................GAGATCTGCGCCGAGCG............................................................................................................. 17 2 20 0.05 1 0 0 0 1

Anti-sense strand reads

AGTTATCAACCGACCCGGTCTACGGTCGGCTGGTTTGCCGGTTAACCCACCACTCAGAGTTTACCTTCATCCTAAGTCTTAAACAATCTCACACTCACCCTCTAACGAGCTGACCCTTTATGGGACTCTAGACGCTTCTCGCTGTTAAAGTGAGAAACATCCGAAGAAAATACGCATTTATCGAGTGTGTGGGTGTGCGTGCGAACGTATCTACGAATAACGCGTCGAATGTGCGACTCTAAAATAAGTTC
**************************************************.(((((((............)))))))............(((((.(((((......((((...(((.....)))))))..((((((((((.((.....)).))))))))))(((..((........))..))).......))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M060
embryo
 V049
head
 V110
male body
...........................................................................................................................................................................................CGTGGGTGTGCGTGCGAACGT........................................... 21 1 1 1.00 1 0 1 0 0
.......................GGTCGGCTGGTTTGCCGGT................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
.......................GGTCGCTTGGTTTGCCGGT................................................................................................................................................................................................................. 19 2 7 0.14 1 1 0 0 0
......................GGGTCGACTGGTGTGCCGGT................................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 1 0
......................AGGTCGATTGGTTTGCCGGT................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1
......................CGGTCGCTTGGTGTGCCGGT................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:17679596-17679846 - dmo_1191 TCAATAGTTGGCTGGGCCAGATGCCAGCCGACCAAACGGCCAATTGGGTGGTGAGTCTCAAA-----TGGA------AGTAGGATTCAGAATTTGTTAGAGTGTGAGTGGGAGATTGCTCGACTGGGAAATACCCTGAGATCTGCGAAGAGCGACAATTTCACTCTTTGTAGGCTTCTTTTATGCGTAAATAGCTCACACACCCACACGCACGCTTGCATAGATGCTTATTGCGCAGCTTACACGCTGAGATTTTATTCAAG
droVir3 scaffold_12875:9424817-9424872 + TTAATAGTTGGCTAACCCAGATGCCAGCGGGCCAGACAGCAAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:2690535-2690590 + TCAATAGCTGGATGAGCCAGATGCCAGCCGGGCAGACAGCCAATTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004513:3138686-3138741 - TCAATAGTTGGTTGGGACTGATGCCATCTTATCAGACAGCCAATTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:2331837-2331929 + TCAATAGTTGGCTGGGACAAATACCCGCCGGAAAGACGGCTAACTGGGTGGTAAGTG-----CTCGAACACGCTTCAAGATCCGCAAGCTTCTGAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_2:2503567-2503659 + TCAAGAGTTGGCTGGGACAAATACCCGCCGGAAAGACGGCTAACTGGGTGGTAAGTG-----CTCGAACACGCTTCAAGATCCGCAAGCTTCTGAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:1655518-1655589 - TTAACAACTGGCTCAACTTGATGCCCGAGGGCAAGAGTGCCAACTGGGTGGTAGGTA-----TTAAATGGGGATTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396730:2643659-2643733 - TCAATAGTTGGCTAACTCAGATGCCAGCTTCCAGGACAGCTAACTGGGTGGTAAGTTTAAGG-----CCAA------ATTAT------------GTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302277:206934-206989 + TTAACAGCTGGCTGACCCAGATGCCCGCCGGCCAGACAGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453851:1985654-1985709 - TCAACAGCTGGCTGACCCAAATGCCCGCTGGTCAGACGGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491240:1181293-1181348 + TCAACAGCTGGCTGACGCAGATGCCCGCCGGACAAACGGCCAACTGGGTGGTGGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770177:485065-485120 + TCAACAGCTGGCTGACGCAGATGCCCGCTGGACAAACTGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302291:2234007-2234093 + TTAACAACTGGCTTAATCTGATGCCCGAGGGCAAGAGCGCTAACTGGGTGGTAAGTTTGGGG-----GGGG------TGAGCTATTGGCAATTAGTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415627:239804-239859 + TCAACAGCTGGTTGACCCAGATGCCCGCCGGTCAGACAGCCAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409183:11353-11418 + TCAACAGCTGGTTGAGTCAGATGCCCGCCGGACAGACAGCTAACTGGGTGGTAAGGGA-T--CTCGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:4353768-4353823 + TCAGTAGCTGGTTGAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:5167433-5167488 + TCAATAGCTGGTTAAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:1995829-1995884 + TCAGTAGCTGGTTGAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:17008799-17008854 + TCAACAGCTGGTTGAGCCAAATGCCGGCTGGACAGACAGCCAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:18289815-18289901 - TTAACAACTGGCTTAATCTGATGCCCGAGGGCAAGAGCGCCAACTGGGTGGTAAGCTTATAA-----GCAA------TTAGCAATAAGTTGATAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCAATAGTTGGCTGGGCCAGATGCCAGCCGACCAAACGGCCAATTGGGTGGTGAGTCTCAAA-----TGGA------AGTAGGATTCAGAATTTGTTAGAGTGTGAGTGGGAGATTGCTCGACTGGGAAATACCCTGAGATCTGCGAAGAGCGACAATTTCACTCTTTGTAGGCTTCTTTTATGCGTAAATAGCTCACACACCCACACGCACGCTTGCATAGATGCTTATTGCGCAGCTTACACGCTGAGATTTTATTCAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................GACCAAACGGCCAATTGGGT.....................................................................................................................................................................................................................20112.00121000002
.CAATAGTTGGCTGGGCCAGATGCCAGCC.........................................................................................................................................................................................................................................28110.0010900001
.............................GACCAAACGGCCAATTGGGTG....................................................................................................................................................................................................................2115.005500000
...ATAGTTGGCTGGGCCAGATGCCAGCC.........................................................................................................................................................................................................................................2614.004400000
..AATAGTTGGCTGGGCCAGATGCCAGCC.........................................................................................................................................................................................................................................2714.004400000
............................CGACCAAACGGCCAATTGGGTG....................................................................................................................................................................................................................2213.003300000
............................CGACCAAACGGCCAATTGGGTGA...................................................................................................................................................................................................................2312.002200000
..AATAGTTGGCTGGGCCAGATGCCAGC..........................................................................................................................................................................................................................................2612.002200000
.............GGGCCAGATGCCAGCCGAC......................................................................................................................................................................................................................................1912.002200000
.............GGGCCAGATGCCAGCCGACCAAACG................................................................................................................................................................................................................................2512.002200000
.............................GACCAAACGGCCAATTGGG......................................................................................................................................................................................................................1912.002200000
.............GGGCCAGATGCCAGCCGACCAAACGGCCA............................................................................................................................................................................................................................2912.002200000
............................CGACCAAACGGCCAATTGG.......................................................................................................................................................................................................................1912.002200000
............................CGACCAAACGGCCAATTGGGT.....................................................................................................................................................................................................................2112.002100001
......................................................................................................................................................GCGACAATTTCACTCTTTGTAGGC........................................................................................2411.001100000
..AATAGTTGGCTGGGCCAGATGCCA............................................................................................................................................................................................................................................2411.001000001
..............................................................................................................................................................................................................................................TTACACGCTGAGATTTTATTCAAG2411.001100000
..AATAGTTGGCTGGGCCAGATGCC.............................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................GCGACAATTTCACTCTTTGTAGGCTT......................................................................................2611.001100000
............................................................................................................................................................ATTTCACTCTTTGTAGGCTT......................................................................................2011.001100000
......GTTGGCTGGGCCAGATGCCA............................................................................................................................................................................................................................................2011.001100000
...ATAGTTGGCTGGGCCAGATGC..............................................................................................................................................................................................................................................2111.001100000
............TGGGCCAGATGCCAGCCGACCAAAC.................................................................................................................................................................................................................................2511.001100000
............TGGGCCAGATGCCAGCCGAC......................................................................................................................................................................................................................................2011.001100000
............TGGGCCAGATGCCAGCCGACC.....................................................................................................................................................................................................................................2111.001100000
...............GCCAGATGCCAGCCGACCAAACG................................................................................................................................................................................................................................2311.001100000
................................................................................................................................AATACCCTGAGATCTGCGAAGA................................................................................................................2211.001100000
..................................................................................................................................TACCCTGAGATCTGCGAAG.................................................................................................................1911.001100000
.............................GACCAAACGGCCAATTGGGTGA...................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................GCGACAATTTCACTCTTTGTA...........................................................................................2111.001100000
.CAATAGTTGGCTGGGCCAGATG...............................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................GCGACAATTTCACTCTTTGTAGGCTTC.....................................................................................2711.001100000
..............................................................................................................................GAAATACCCTGAGATCTGCGAAG.................................................................................................................2311.001100000
...ATAGTTGGCTGGGCCAGATGCCA............................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................GAAATACCCTGAGATCTGCGAAGA................................................................................................................2411.001100000
.CAATAGTTGGCTGGGCCAGA.................................................................................................................................................................................................................................................2011.001000001
...ATAGTTGGCTGGGCCAGATGCCAGC..........................................................................................................................................................................................................................................2511.001100000
.................CAGATGCCAGCCGACCAAACGGC..............................................................................................................................................................................................................................2311.001100000
.............................GACCAAACGGCCAATTGGGTGGTGAGT..............................................................................................................................................................................................................2711.001100000
.............................................................................................................................GGAAATACCCTGAGATCTGCGAAGA................................................................................................................2511.001100000
TCAATAGTTGGCTGGGCCAGATGCCAGCC.........................................................................................................................................................................................................................................2911.001100000
droVir3
TTAATAGTTGGCTAACCCAGATGCCAGCGGGCCAGACAGCAAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............TAACCCAGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................25129.00290013000000000003310100080000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................26121.00210010000000000002201100040000000000000000000000000000000000000010
...........CTAACCCAGATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................27115.0015008000000000001201000010000000000000000000000000000000000000020
...........CTAACCCAGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................26114.0014009000000000002011100000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................27110.0010002000000000002101110020000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGGGCC.....................................................................................................................................................................................................................................2219.009004000000000000100000200000000000000000000000000000000000000020
...........CTAACCCAGATGCCAGCGGGC......................................................................................................................................................................................................................................2118.008003000000000000201000000000000000000000000000000000000000000020
............TAACCCAGATGCCAGCGGGCC.....................................................................................................................................................................................................................................2117.007001000000000000212000100000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................1917.007007000000000000000000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCA....................................................................................................................................................................................................................................2216.006003000000000002010000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGA..................................................................................................................................................................................................................................2416.006000000000000002010100200000000000000000000000000000000000000000
.............AACCCAGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................2415.005001000000000001001000200000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGC......................................................................................................................................................................................................................................2015.005000000000000000100220000000000000000000000000000000000000000000
..AATAGTTGGCTAACCCAGA.................................................................................................................................................................................................................................................1915.005001000000000001101000010000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................2015.005002000000000000101000010000000000000000000000000000000000000000
..........GCTAACCCAGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................2714.004003000000000000000000010000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGGGCCA....................................................................................................................................................................................................................................2314.004000000000000001000010200000000000000000000000000000000000000000
......................GCCAGCGGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2714.004003000000000000000100000000000000000000000000000000000000000000
.......................CCAGCGGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2614.004001000000000001000010000000000000000000000000000000000000000010
.........GGCTAACCCAGATGCCAGCGGGC......................................................................................................................................................................................................................................2314.004004000000000000000000000000000000000000000000000000000000000000
.............AACCCAGATGCCAGCGGGCCAGA..................................................................................................................................................................................................................................2314.004000000000000002001000000000000000000000000000000000000000000010
......GTTGGCTAACCCAGATGCCA............................................................................................................................................................................................................................................2013.003002000000000000001000000000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................2813.003000000000000000010000110000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGGGCCAGA..................................................................................................................................................................................................................................2513.003002000000000001000000000000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGGGCCAG...................................................................................................................................................................................................................................2413.003002000000000000100000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGG.......................................................................................................................................................................................................................................1913.003003000000000000000000000000000000000000000000000000000000000000
......................GCCAGCGGGCCAGACAGCAAACTGG.......................................................................................................................................................................................................................2513.003001000000000000000000000000000000000000000000000000000000000020
.................CAGATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................2213.003000000000000000001000010000000000000000000000000000000000000010
................CCAGATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................2313.003002000000000000000000100000000000000000000000000000000000000000
........................CAGCGGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2512.002001000000000000000000000000000000000000000000000000000000000010
.TAATAGTTGGCTAACCCAG..................................................................................................................................................................................................................................................1912.002000000000000000000000200000000000000000000000000000000000000000
.TAATAGTTGGCTAACCCAGATGCCA............................................................................................................................................................................................................................................2512.002000000000000000101000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGACAGC..............................................................................................................................................................................................................................2812.002000000000000001100000000000000000000000000000000000000000000000
.....................TGCCAGCGGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2812.002000000000000000001000010000000000000000000000000000000000000000
..AATAGTTGGCTAACCCAGAT................................................................................................................................................................................................................................................2012.002000000000000002000000000000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGACAGC..............................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.TAATAGTTGGCTAACCCAGAT................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.......................CCAGCGGGCCAGACAGCAAACTGGG......................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
.TAATAGTTGGCTAACCCAGA.................................................................................................................................................................................................................................................2012.002000000000000000001000100000000000000000000000000000000000000000
.............AACCCAGATGCCAGCGGGCCAGACAG...............................................................................................................................................................................................................................2612.002001000000000001000000000000000000000000000000000000000000000000
.........GGCTAACCCAGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
...ATAGTTGGCTAACCCAGAT................................................................................................................................................................................................................................................1912.002000000000000001100000000000000000000000000000000000000000000000
.........GGCTAACCCAGATGCCAGCGGGCC.....................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
.....................TGCCAGCGGGCCAGACAGCA.............................................................................................................................................................................................................................2012.002001000000000000010000000000000000000000000000000000000000000000
.....AGTTGGCTAACCCAGATGCCAGCG.........................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
.........GGCTAACCCAGATGCCAGCGGG.......................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................GGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................CAGACAGCAAACTGGGTG....................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
......GTTGGCTAACCCAGATGCC.............................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......GTTGGCTAACCCAGATGCCAGCG.........................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
..................AGATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................CCAGCGGGCCAGACAGCAAACTGGGTG....................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........GCTAACCCAGATGCCAGCGGGCCA....................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCG.........................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
...............CCCAGATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGACAGCAAACT.........................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGACAGCA.............................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................CAGCGGGCCAGACAGCAAA...........................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.........GGCTAACCCAGATGCCAGCGG........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....AGTTGGCTAACCCAGATGCCA............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................CAGCGGGCCAGACAGCAAACTGGG......................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.......................CCAGCGGGCCAGACAGCAAACTG........................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................AGATGCCAGCGGGCCAGA..................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
TTAATAGTTGGCTAACCCAGA.................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....AGTTGGCTAACCCAGATGCCAGCGGGCCA....................................................................................................................................................................................................................................2911.001000000000000000000100000000000000000000000000000000000000000000
.....AGTTGGCTAACCCAGATGC..............................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
TTAATAGTTGGCTAACCCAGATG...............................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................AGACAGCAAACTGGGTGA...................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
..AATAGTTGGCTAACCCAGATG...............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...ATAGTTGGCTAACCCAGATGCCA............................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
..........GCTAACCCAGATGCCAGCGGGCC.....................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
.TAATAGTTGGCTAACCCAGATG...............................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
...................................ACAGCAAACTGGGTGGTAAG...............................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........GCTAACCCAGATGCCAGCG.........................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........TGGCTAACCCAGATGCCAGCGGGCC.....................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............AACCCAGATGCCAGCGGGCCAGACA................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................ATGCCAGCGGGCCAGACAGC..............................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGACAGCA.............................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
..............................GCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....AGTTGGCTAACCCAGATGCC.............................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
....................ATGCCAGCGGGCCAGACAGCA.............................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....................TGCCAGCGGGCCAGACAGCAAAC..........................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAG...................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
...................GATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............AACCCAGATGCCAGCGGG.......................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
............TAACCCAGATGCCAGCGGGCCAGAT.................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
...ATAGTTGGCTAACCCAGATG...............................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
....................ATGCCAGCGGGCCAGACAGCAAACT.........................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........CTAACCCAGATGCCAGCGG........................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..............ACCCAGATGCCAGCGGGCCAGA..................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..................AGATGCCAGCGGGCCAGAC.................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
......................GCCAGCGGGCCAGACAGCA.............................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........GCTAACCCAGATGCCAGCGGGC......................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
droGri2
TCAATAGCTGGATGAGCCAGATGCCAGCCGGGCAGACAGCCAATTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......CTGGATGAGCCAGATGCCA............................................................................................................................................................................................................................................1911.00110
...................GATGCCAGCCGGGCAGACAG...............................................................................................................................................................................................................................2011.00110
.........GGATGAGCCAGATGCCAGCCGG.......................................................................................................................................................................................................................................2211.00110
......GCTGGATGAGCCAGATGCCAGCCGGGCA....................................................................................................................................................................................................................................2811.00110
droWil2
TCAATAGTTGGTTGGGACTGATGCCATCTTATCAGACAGCCAATTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..AATAGTTGGTTGGGACTGA.................................................................................................................................................................................................................................................19120.0020011900
..AATAGTTGGTTGGGACTGATGCCAT...........................................................................................................................................................................................................................................2516.00600600
..AATAGTTGGTTGGGACTGAT................................................................................................................................................................................................................................................2015.00501400
.....................TGCCATCTTATCAGACAGCCAATTGGGT.....................................................................................................................................................................................................................2815.00503101
......GTTGGTTGGGACTGATGCC.............................................................................................................................................................................................................................................1914.00400400
.CAATAGTTGGTTGGGACTGA.................................................................................................................................................................................................................................................2014.00400400
..AATAGTTGGTTGGGACTGATGC..............................................................................................................................................................................................................................................2214.00400400
TCAATAGTTGGTTGGGACT...................................................................................................................................................................................................................................................1913.00300300
...................GATGCCATCTTATCAGACAGCC.............................................................................................................................................................................................................................2213.00303000
.CAATAGTTGGTTGGGACTG..................................................................................................................................................................................................................................................1913.00301200
..............................ATCAGACAGCCAATTGGGT.....................................................................................................................................................................................................................1913.00301020
...................GATGCCATCTTATCAGACAGCCA............................................................................................................................................................................................................................2313.00301110
......................GCCATCTTATCAGACAGCCAATTGGGT.....................................................................................................................................................................................................................2713.00301110
.........GGTTGGGACTGATGCCATCTTATC.....................................................................................................................................................................................................................................2412.00201100
..AATAGTTGGTTGGGACTGATGCC.............................................................................................................................................................................................................................................2312.00200200
.CAATAGTTGGTTGGGACTGATGC..............................................................................................................................................................................................................................................2312.00200200
.CAATAGTTGGTTGGGACTGAT................................................................................................................................................................................................................................................2112.00220000
.....................TGCCATCTTATCAGACAGCC.............................................................................................................................................................................................................................2012.00202000
...................GATGCCATCTTATCAGAC.................................................................................................................................................................................................................................1812.00220000
...ATAGTTGGTTGGGACTGATGCCATCT.........................................................................................................................................................................................................................................2612.00220000
..AATAGTTGGTTGGGACTGATGCCATC..........................................................................................................................................................................................................................................2612.00210010
....................ATGCCATCTTATCAGACA................................................................................................................................................................................................................................1812.00201010
...................GATGCCATCTTATCAGACA................................................................................................................................................................................................................................1912.00201010
.CAATAGTTGGTTGGGACTGATGCCAT...........................................................................................................................................................................................................................................2611.00100100
TCAATAGTTGGTTGGGACTGA.................................................................................................................................................................................................................................................2111.00100100
......................GCCATCTTATCAGACAGCC.............................................................................................................................................................................................................................1911.00101000
..........GTTGGGACTGATGCCATCT.........................................................................................................................................................................................................................................1911.00101000
....................ATGCCATCTTATCAGACAGCC.............................................................................................................................................................................................................................2111.00101000
.....................TGCCATCTTATCAGACAGCCA............................................................................................................................................................................................................................2111.00100100
...ATAGTTGGTTGGGACTGATGC..............................................................................................................................................................................................................................................2111.00100100
....TAGTTGGTTGGGACTGATGCCATC..........................................................................................................................................................................................................................................2411.00100100
.....AGTTGGTTGGGACTGATGCCAT...........................................................................................................................................................................................................................................2211.00100100
....TAGTTGGTTGGGACTGATGCCAT...........................................................................................................................................................................................................................................2311.00100100
............TGGGACTGATGCCATCTTATC.....................................................................................................................................................................................................................................2111.00100010
......................GCCATCTTATCAGACAGCCA............................................................................................................................................................................................................................2011.00100100
.CAATAGTTGGTTGGGACT...................................................................................................................................................................................................................................................1811.00100010
.....AGTTGGTTGGGACTGATGC..............................................................................................................................................................................................................................................1911.00100100
.......TTGGTTGGGACTGATGCC.............................................................................................................................................................................................................................................1811.00110000
.....AGTTGGTTGGGACTGATGCC.............................................................................................................................................................................................................................................2011.00100100
.CAATAGTTGGTTGGGACTGATGCCATCT.........................................................................................................................................................................................................................................2811.00100100
......GTTGGTTGGGACTGATGCCAT...........................................................................................................................................................................................................................................2111.00100100
..AATAGTTGGTTGGGACTG..................................................................................................................................................................................................................................................1811.00101000
dp5
TCAATAGTTGGCTGGGACAAATACCCGCCGGAAAGACGGCTAACTGGGTGGTAAGTG-----CTCGAACACGCTTCAAGATCCGCAAGCTTCTGAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................CGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................21118.001801710000000
..............................GAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................19112.00120900003000
.............................GGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................20112.001201110000000
............................CGGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................1918.0080800000000
.........................CGCCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2417.0070300004000
............................CGGAAAGACGGCTAACTGGGTG....................................................................................................................................................................................................................2214.0040400000000
...................AATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2014.0040400000000
....................ATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................1914.0040400000000
.................CAAATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2214.0040400000000
........................CCGCCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2513.0030100002000
...............GACAAATACCCGCCGGAAA....................................................................................................................................................................................................................................1913.0030300000000
..................AAATACCCGCCGGAAAGACG................................................................................................................................................................................................................................2013.0030300000000
..AATAGTTGGCTGGGACAA..................................................................................................................................................................................................................................................1813.0030300000000
...........................CCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2213.0030300000000
...............GACAAATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2413.0030300000000
..................AAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................1913.0030300000000
..................AAATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2113.0030200010000
....................ATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2012.0020200000000
..........................GCCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2312.0020200000000
.............................GGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................1812.0020200000000
...ATAGTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2512.0020200000000
...................AATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2112.0020110000000
.....AGTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2312.0020200000000
...............GACAAATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2512.0020200000000
..AATAGTTGGCTGGGACAAATACCC............................................................................................................................................................................................................................................2412.0020200000000
.........................CGCCGGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................2212.0020200000000
................ACAAATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2412.0020200000000
........TGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2012.0020200000000
.................CAAATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2312.0020100001000
...............................AAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................1812.0020200000000
.................CAAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................2012.0020200000000
...............GACAAATACCCGCCGGAAAGA..................................................................................................................................................................................................................................2112.0020200000000
.CAATAGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2412.0020200000000
................ACAAATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2312.0020000002000
..AATAGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2312.0020200000000
.CAATAGTTGGCTGGGACAAATACCCGCC.........................................................................................................................................................................................................................................2811.0010100000000
.CAATAGTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2711.0010100000000
.CAATAGTTGGCTGGGACAAATA...............................................................................................................................................................................................................................................2211.0010100000000
.....................TACCCGCCGGAAAGACGGCTAAC..........................................................................................................................................................................................................................2311.0010100000000
.....AGTTGGCTGGGACAAATACCC............................................................................................................................................................................................................................................2111.0010100000000
............................CGGAAAGACGGCTAACTGGGTAA...................................................................................................................................................................................................................2311.0010100000000
...............GACAAATACCCGCCGGAA.....................................................................................................................................................................................................................................1811.0010100000000
...............GACAAATACCCGCCGGAAAGACG................................................................................................................................................................................................................................2311.0010100000000
.................CAAATACCCGCCGGAAAGACGGCTAAC..........................................................................................................................................................................................................................2711.0010100000000
....................ATACCCGCCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2911.0010000001000
.......................CCCGCCGGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2611.0010000000001
...ATAGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2211.0010100000000
..AATAGTTGGCTGGGACAAAT................................................................................................................................................................................................................................................2011.0010100000000
TCAATAGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2511.0010100000000
..............GGACAAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................2311.0010000001000
.....AGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2011.0010100000000
................ACAAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................2111.0010100000000
..................AAATACCCGCCGGAAAGACGGC..............................................................................................................................................................................................................................2211.0010100000000
......GTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2211.0010100000000
.............................GGAAAGACGGCTAACTGGGTG....................................................................................................................................................................................................................2111.0010100000000
...................AATACCCGCCGGAAAGACGGCTAACTG........................................................................................................................................................................................................................2711.0010100000000
.....................TACCCGCCGGAAAGACGGCTAACTG........................................................................................................................................................................................................................2511.0010100000000
..............GGACAAATACCCGCCGGAA.....................................................................................................................................................................................................................................1911.0010100000000
..............GGACAAATACCCGCCGGAAAGACGG...............................................................................................................................................................................................................................2511.0010100000000
................ACAAATACCCGCCGGAAA....................................................................................................................................................................................................................................1811.0010100000000
.............GGGACAAATACCCGCCGGAAAGACG................................................................................................................................................................................................................................2511.0010100000000
.....AGTTGGCTGGGACAAATACCCGCCGGA......................................................................................................................................................................................................................................2711.0010100000000
.........................CGCCGGAAAGACGGCTAACTGGGTGA...................................................................................................................................................................................................................2611.0010100000000
...................AATACCCGCCGGAAAGACGGCTA............................................................................................................................................................................................................................2311.0010100000000
..............................GAAAGACGGCTAACTGGGTG....................................................................................................................................................................................................................2011.0010100000000
.............GGGACAAATACCCGCCGGAAA....................................................................................................................................................................................................................................2111.0010100000000
.............................GGAAAGACGGCTAACTGGG......................................................................................................................................................................................................................1911.0010100000000
.CAATAGTTGGCTGGGACA...................................................................................................................................................................................................................................................1811.0010100000000
TCAATAGTTGGCTGGGAC....................................................................................................................................................................................................................................................1811.0010100000000
..........................GCCGGAAAGACGGCTAACTGGG......................................................................................................................................................................................................................2211.0010100000000
............................CGGAAAGACGGCTAACTGGG......................................................................................................................................................................................................................2011.0010100000000
............TGGGACAAATACCCGCCGGA......................................................................................................................................................................................................................................2011.0010100000000
.........................CGCCGGAAAGACGGCTAACTGGGTG....................................................................................................................................................................................................................2511.0010100000000
......GTTGGCTGGGACAAATACCC............................................................................................................................................................................................................................................2011.0010100000000
....................ATACCCGCCGGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................2711.0010100000000
................................AAGACGGCTAACTGGGTG....................................................................................................................................................................................................................1811.0010100000000
droPer2
TCAAGAGTTGGCTGGGACAAATACCCGCCGGAAAGACGGCTAACTGGGTGGTAAGTG-----CTCGAACACGCTTCAAGATCCGCAAGCTTCTGAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......GTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................1918.008710000
......GTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2215.005302000
.......TTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2115.005500000
..............................GAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................1914.004001003
..AAGAGTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2614.004400000
..................AAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................1913.003300000
..AAGAGTTGGCTGGGACAAATAC..............................................................................................................................................................................................................................................2213.003300000
...AGAGTTGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2513.003300000
...................AATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................1813.003300000
..........GCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................1812.002200000
................ACAAATACCCGCCGGAAAGA..................................................................................................................................................................................................................................2012.002200000
TCAAGAGTTGGCTGGGAC....................................................................................................................................................................................................................................................1812.002200000
.CAAGAGTTGGCTGGGACAAATACC.............................................................................................................................................................................................................................................2412.002200000
................ACAAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................2112.002200000
.....................TACCCGCCGGAAAGACGGCTAACTGGG......................................................................................................................................................................................................................2711.001010000
..AAGAGTTGGCTGGGACAAATACCCGCC.........................................................................................................................................................................................................................................2711.001000001
.........GGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................1911.001100000
.CAAGAGTTGGCTGGGACA...................................................................................................................................................................................................................................................1811.001100000
...............GACAAATACCCGCCGGAAAGAC.................................................................................................................................................................................................................................2211.001100000
............................CGGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................1911.001010000
.............GGGACAAATACCCGCCGGAAA....................................................................................................................................................................................................................................2111.001010000
.CAAGAGTTGGCTGGGACAAA.................................................................................................................................................................................................................................................2011.001000001
........TGGCTGGGACAAATACCCGC..........................................................................................................................................................................................................................................2011.001010000
.............................GGAAAGACGGCTAACTGG.......................................................................................................................................................................................................................1811.001010000
.............................GGAAAGACGGCTAACTGGGT.....................................................................................................................................................................................................................2011.001010000
droAna3
TTAACAACTGGCTCAACTTGATGCCCGAGGGCAAGAGTGCCAACTGGGTGGTAGGTA-----TTAAATGGGGATTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
TTAACAACTGGCTCAACTTGATG...............................................................................................................................................................................................................................................2312.002020000
.................TTGATGCCCGAGGGCAAGAGTGCCA............................................................................................................................................................................................................................2511.001000010
.........GGCTCAACTTGATGCCCGAGGGC......................................................................................................................................................................................................................................2311.001010000
............TCAACTTGATGCCCGAGGGCAAGAGTGC..............................................................................................................................................................................................................................2811.001010000
.....AACTGGCTCAACTTGATGCCCGAGGGCA.....................................................................................................................................................................................................................................2811.001010000
.....AACTGGCTCAACTTGATGCCCG...........................................................................................................................................................................................................................................2211.001010000
droBip1
TCAATAGTTGGCTAACTCAGATGCCAGCTTCCAGGACAGCTAACTGGGTGGTAAGTTTAAGG-----CCAA------ATTAT------------GTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTAACAGCTGGCTGACCCAGATGCCCGCCGGCCAGACAGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAACAGCTGGCTGACCCAAATGCCCGCTGGTCAGACGGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCAACAGCTGGCTGACGCAGATGCCCGCCGGACAAACGGCCAACTGGGTGGTGGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAACAGCTGGCTGACGCAGATGCCCGCTGGACAAACTGCCAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTAACAACTGGCTTAATCTGATGCCCGAGGGCAAGAGCGCTAACTGGGTGGTAAGTTTGGGG-----GGGG------TGAGCTATTGGCAATTAGTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCAACAGCTGGTTGACCCAGATGCCCGCCGGTCAGACAGCCAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCAACAGCTGGTTGAGTCAGATGCCCGCCGGACAGACAGCTAACTGGGTGGTAAGGGA-T--CTCGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCAGTAGCTGGTTGAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....AGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000300000000
.................CAAATGCCGGCTGGCCAGACA................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000010000000
.....AGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110000000
..................AAATGCCGGCTGGCCAGACA................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000
.CAGTAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGTAGCTGGTTGAGCCAAA.................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000
.......CTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
.CAGTAGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000
.................CAAATGCCGGCTGGCCAGA..................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTAGCTGGTTGAGCCAAATGCCGG...........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..AGTAGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........GTTGAGCCAAATGCCGGCTGGCCC....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGTTGAGCCAAATGCCGGCTGGCC.....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCGGCTGGCCAGACAGCA.............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAAATGCCGGCTGGCCAGAC.................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCAGTAGCTGGTTGAGCCAAA.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........GGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TAGCTGGTTGAGCCAAATGCCGG...........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
TCAGTAGCTGGTTGAGCCA...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..AGTAGCTGGTTGAGCCA...................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAAATGCCGGCTGGCCAGACT................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGACAGCAAACTGGGTGA...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........GTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTAGCTGGTTGAGCCAAATG...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................GGCCAGACAGCAAACTGGGTGG...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGCCGGCTGGCCAGACAGCA.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGTTGAGCCAAATGCCGG...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............GAGCCAAATGCCGGCTGGCCAG...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................GGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTAGCTGGTTGAGCCATC.................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGTTGAGCCAAATAA..............................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
droSim2
TCAATAGCTGGTTAAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........GTTAAGCCAAATGCCGGCTGGCCAGA..................................................................................................................................................................................................................................2614.00400040000000000000
.................CAAATGCCGGCTGGCCAGAC.................................................................................................................................................................................................................................2013.00301020000000000000
..................AAATGCCGGCTGGCCAGACAGCA.............................................................................................................................................................................................................................2312.00200020000000000000
.................CAAATGCCGGCTGGCCAGACAGCAAA...........................................................................................................................................................................................................................2611.00100010000000000000
..................AAATGCCGGCTGGCCAGA..................................................................................................................................................................................................................................1811.00100010000000000000
.................CAAATGCCGGCTGGCCAGACAGCAA............................................................................................................................................................................................................................2511.00100010000000000000
..........GTTAAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................1911.00100010000000000000
..........GTTAAGCCAAATGCCGGCTGGCCA....................................................................................................................................................................................................................................2411.00100010000000000000
.............................GGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2011.00100010000000000000
......................GCCGGCTGGCCAGACAGCAAACTG........................................................................................................................................................................................................................2411.00100010000000000000
.................CAAATGCCGGCTGGCCAGACAGCA.............................................................................................................................................................................................................................2411.00100010000000000000
.........................GGCTGGCCAGACAGCAAACTGGG......................................................................................................................................................................................................................2311.00100010000000000000
..................AAATGCCGGCTGGCCAGACAGCAAACTG........................................................................................................................................................................................................................2811.00100010000000000000
.....................TGCCGGCTGGCCAGACAGCAAACTGGGT.....................................................................................................................................................................................................................2811.00101000000000000000
..................AAATGCCGGCTGGCCAGACAGCAAACT.........................................................................................................................................................................................................................2711.00101000000000000000
..........GTTAAGCCAAATGCCGGCTGGCCAGAC.................................................................................................................................................................................................................................2711.00100010000000000000
.................CAAATGCCGGCTGGCCAGACA................................................................................................................................................................................................................................2111.00100010000000000000
..................AAATGCCGGCTGGCCAGAC.................................................................................................................................................................................................................................1911.00101000000000000000
................CCAAATGCCGGCTGGCCAGAC.................................................................................................................................................................................................................................2111.00101000000000000000
........TGGTTAAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
TCAGTAGCTGGTTGAGCCAAATGCCGGCTGGCCAGACAGCAAACTGGGTGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.CAGTAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2411.0010100
....................ATGCCGGCTGGCCAGACAGC..............................................................................................................................................................................................................................2011.0011000
droYak3
TCAACAGCTGGTTGAGCCAAATGCCGGCTGGACAGACAGCCAACTGGGTGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.CAACAGCTGGTTGAGCCAAA.................................................................................................................................................................................................................................................2017.00700000070000
....CAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2116.00620000040000
.CAACAGCTGGTTGAGCCAAAT................................................................................................................................................................................................................................................2116.00600000060000
......GCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................1916.00604000020000
......GCTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2215.00500100040000
.CAACAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2415.00501000040000
.CAACAGCTGGTTGAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................2815.00505000000000
.............................GGACAGACAGCCAACTGGG......................................................................................................................................................................................................................1914.00404000000000
.CAACAGCTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2714.00401000030000
.....AGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2014.00400000040000
...ACAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2214.00400000040000
.............................GGACAGACAGCCAACTGGGT.....................................................................................................................................................................................................................2013.00303000000000
..AACAGCTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................2313.00300000030000
.............GAGCCAAATGCCGGCTGGACAGACAGC..............................................................................................................................................................................................................................2713.00302000010000
..........GTTGAGCCAAATGCCGGCTGGAC.....................................................................................................................................................................................................................................2313.00302000010000
..................AAATGCCGGCTGGACAGACA................................................................................................................................................................................................................................2013.00312000000000
..AACAGCTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2613.00300000120000
.CAACAGCTGGTTGAGCCAAATGCCG............................................................................................................................................................................................................................................2513.00300000030000
..............................GACAGACAGCCAACTGGGT.....................................................................................................................................................................................................................1912.00202000000000
..AACAGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................2212.00200000020000
......GCTGGTTGAGCCAAATGCCGG...........................................................................................................................................................................................................................................2112.00200000020000
.............GAGCCAAATGCCGGCTGGACAGACA................................................................................................................................................................................................................................2512.00200000020000
............................TGGACAGACAGCCAACTGGGT.....................................................................................................................................................................................................................2112.00202000000000
.................CAAATGCCGGCTGGACAGAC.................................................................................................................................................................................................................................2012.00201000010000
.....AGCTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2312.00200000020000
......GCTGGTTGAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................2311.00101000000000
.........................GGCTGGACAGACAGCCAACTGGG......................................................................................................................................................................................................................2311.00101000000000
...........................CTGGACAGACAGCCAACTGGGTGA...................................................................................................................................................................................................................2411.00100000010000
.......CTGGTTGAGCCAAATGCC.............................................................................................................................................................................................................................................1811.00100000100000
..........GTTGAGCCAAATGCCGGCTGGA......................................................................................................................................................................................................................................2211.00100000010000
........................CGGCTGGACAGACAGCCAACTGGGT.....................................................................................................................................................................................................................2511.00100000010000
..........GTTGAGCCAAATGCCGGCTGGACAGA..................................................................................................................................................................................................................................2611.00101000000000
.......CTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2111.00100000010000
.................CAAATGCCGGCTGGACAGACAGCCAACT.........................................................................................................................................................................................................................2811.00101000000000
.............GAGCCAAATGCCGGCTGGACAGA..................................................................................................................................................................................................................................2311.00101000000000
......GCTGGTTGAGCCAAATGCCGGCTGGACAG...................................................................................................................................................................................................................................2911.00100000010000
TCAACAGCTGGTTGAGCCAAATGCCG............................................................................................................................................................................................................................................2611.00100000010000
TCAACAGCTGGTTGAGCCAA..................................................................................................................................................................................................................................................2011.00100000010000
..................AAATGCCGGCTGGACAGA..................................................................................................................................................................................................................................1811.00101000000000
............TGAGCCAAATGCCGGCTGGACAGA..................................................................................................................................................................................................................................2411.00101000000000
.................CAAATGCCGGCTGGACAGACA................................................................................................................................................................................................................................2111.00100000010000
...........................CTGGACAGACAGCCAACTGGGT.....................................................................................................................................................................................................................2211.00100000010000
..............................GACAGACAGCCAACTGGG......................................................................................................................................................................................................................1811.00101000000000
..............AGCCAAATGCCGGCTGGACAGACAG...............................................................................................................................................................................................................................2511.00100000010000
............................TGGACAGACAGCCAACTGGGTGA...................................................................................................................................................................................................................2311.00100000010000
.............GAGCCAAATGCCGGCTGGACAGACAG...............................................................................................................................................................................................................................2611.00101000000000
............TGAGCCAAATGCCGGCTGGACAGACAGCC.............................................................................................................................................................................................................................2911.00100000010000
............................TGGACAGACAGCCAACTGGGC.....................................................................................................................................................................................................................2111.00100100000000
.............................GGACAGACAGCCAACTGGGTGA...................................................................................................................................................................................................................2211.00101000000000
...............GCCAAATGCCGGCTGGACAGAC.................................................................................................................................................................................................................................2211.00101000000000
.........GGTTGAGCCAAATGCCGGCTGGAC.....................................................................................................................................................................................................................................2411.00101000000000
....CAGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................2011.00100000010000
..AACAGCTGGTTGAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................2711.00101000000000
................CCAAATGCCGGCTGGACAGAC.................................................................................................................................................................................................................................2111.00100000010000
....CAGCTGGTTGAGCCAAATGCCGGC..........................................................................................................................................................................................................................................2411.00100000010000
.......CTGGTTGAGCCAAATGCCGGCT.........................................................................................................................................................................................................................................2211.00100000010000
.......CTGGTTGAGCCAAATGCCGGCTG........................................................................................................................................................................................................................................2311.00101000000000
.................CAAATGCCGGCTGGACAGA..................................................................................................................................................................................................................................1911.00100000010000
..................AAATGCCGGCTGGACAGACAGCCAACT.........................................................................................................................................................................................................................2711.00101000000000
.CAACAGCTGGTTGAGCCAAATGC..............................................................................................................................................................................................................................................2311.00100000010000
droEre2
TTAACAACTGGCTTAATCTGATGCCCGAGGGCAAGAGCGCCAACTGGGTGGTAAGCTTATAA-----GCAA------TTAGCAATAAGTTGATAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................GGGCAAGAGCGCCAACTGGGT.....................................................................................................................................................................................................................2111.0011000000
...................GATGCCCGAGGGCAAGAGCGCC.............................................................................................................................................................................................................................2211.0010000100
.................CTGATGCCCGAGGGCAAGAGCGC..............................................................................................................................................................................................................................2311.0011000000
..........................GAGGGCAAGAGCGCCAACTGGGT.....................................................................................................................................................................................................................2311.0010000100

Generated: 05/17/2015 at 11:51 PM