ID:

dmo_1172

 Coordinate:

scaffold_6496:15445220-15445370 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.4 -16.3

Flybase annnotation

exon [dmoj_GLEANR_3748:1]; CDS [Dmoj\GI18811-cds]; intron [Dmoj\GI18811-in]

Repeatable elements

NameClassFamilyStrand
BEL2-LTR_DmojLTRPao+
mature
  1. scaffold_466:203-225 -
  2. scaffold_565:277-299 -
  3. scaffold_1670:4728-4750 -
  4. scaffold_2199:927-949 -
  5. scaffold_2577:98-120 -
  6. scaffold_3132:525-547 -
  7. scaffold_3638:1445-1467 -
  8. scaffold_3698:636-658 -
  9. scaffold_4487:1232-1254 -
  10. scaffold_4487:7454-7476 -
  11. scaffold_6466:1414-1436 -
  12. scaffold_6496:392934-392956 -
  13. scaffold_6496:399156-399178 -
  14. dmo_1172  scaffold_6496:15445255-15445277 -
  15. scaffold_6496:15451477-15451499 -
  16. scaffold_6498:204456-204478 -
  17. scaffold_6500:489-511 -
  18. scaffold_6540:9432637-9432659 -
  19. scaffold_6540:9438852-9438874 -
  20. scaffold_6680:13011064-13011086 -
  21. scaffold_129:617-639 +
  22. scaffold_282:777-799 +
  23. scaffold_283:944-966 +
  24. scaffold_467:669-691 +
  25. scaffold_481:1088-1110 +
  26. scaffold_2526:2164-2186 +
  27. scaffold_2536:791-813 +
  28. scaffold_2938:1332-1354 +
  29. scaffold_3330:1485-1507 +
  30. scaffold_3827:268-290 +
  31. scaffold_6085:989-1011 +
  32. scaffold_6262:9143-9165 +
  33. scaffold_6473:8533809-8533831 +
  34. scaffold_6496:19322712-19322734 +
  35. scaffold_6496:26678536-26678558 +
  36. scaffold_6500:11294317-11294339 +
  37. scaffold_6500:11300491-11300513 +
  38. scaffold_6500:30419973-30419995 +
  39. scaffold_6500:30426136-30426158 +
  40. scaffold_6500:32045327-32045349 +
  41. scaffold_468:652-674 -
  42. scaffold_3445:979-1001 -
  43. scaffold_3792:4818-4840 -
  44. scaffold_320:1050-1072 -
  45. scaffold_2532:1142-1164 -
  46. scaffold_3625:930-952 -
  47. scaffold_3734:1077-1099 -
  48. scaffold_4173:4649-4671 -
  49. scaffold_4435:902-924 -
  50. scaffold_6357:8085-8107 -
  51. scaffold_6369:33365-33387 -
  52. scaffold_6462:8316-8338 -
  53. scaffold_6500:12926169-12926191 -
  54. scaffold_6540:756281-756303 -
  55. scaffold_6540:762503-762525 -
  56. scaffold_6540:770522-770544 -
  57. scaffold_6680:13017288-13017310 -
  58. scaffold_6680:24342498-24342520 -
  59. scaffold_6680:24348454-24348476 -
star
  1. scaffold_334:2154-2175 -
  2. scaffold_466:288-309 -
  3. scaffold_476:682-703 -
  4. scaffold_1424:1296-1317 -
  5. scaffold_1670:4813-4834 -
  6. scaffold_1855:3314-3335 -
  7. scaffold_3050:2716-2737 -
  8. scaffold_3698:721-742 -
  9. scaffold_4487:1317-1338 -
  10. scaffold_6213:280-301 -
  11. scaffold_6466:1499-1520 -
  12. scaffold_6496:393019-393040 -
  13. dmo_1172  scaffold_6496:15445340-15445361 -
  14. scaffold_6498:204541-204562 -
  15. scaffold_6500:6492990-6493011 -
  16. scaffold_6540:778707-778728 -
  17. scaffold_6540:9432722-9432743 -
  18. scaffold_6540:31466756-31466777 -
  19. scaffold_6680:13011149-13011170 -
  20. scaffold_6680:24348532-24348553 -
  21. scaffold_158:900-921 -
  22. scaffold_563:260-281 -
  23. scaffold_2471:1319-1340 -
  24. scaffold_3708:539-560 -
  25. scaffold_4114:2625-2646 -
  26. scaffold_4136:1371-1392 -
  27. scaffold_4769:453-474 -
  28. scaffold_4769:7770-7791 -
  29. scaffold_5133:892-913 -
  30. scaffold_5958:6076-6097 -
  31. scaffold_6097:4337-4358 -
  32. scaffold_6102:51871-51892 -
  33. scaffold_6261:2330-2351 -
  34. scaffold_6474:46939-46960 -
  35. scaffold_6500:31939826-31939847 -
  36. scaffold_6540:5325371-5325392 -
  37. scaffold_6541:1380555-1380576 -
  38. scaffold_6541:1386771-1386792 -
  39. scaffold_6680:23149059-23149080 -
  40. scaffold_6680:23155281-23155302 -

Sense Strand Reads

------------------################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATTGCATACTAACTACAATGTACGCGAGCCGGCGGATTAAGCTGAGCCGGTGCGTGGGTGAAAGAGACAACGCAAAAGGGAGAGCGTGATCTCCGTTACAAATTCTCTTACATGATAACATATTCTATGAACTGCCGCTCTTAATTACAATGAAGCGATGATTGCTGAGCCCAACAGTAGTCTTTGGCCAAAATTGTGATGTAACCCCTAAATATATTGACCGAAGTTACTCTAGCCTCTAACTTTGGTA
***********************************************************...((((((........((.(((((......))))).))......)))))).(((((........)).)))......(((((...........)).)))........************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
...............................................................................................................................................AATTACAATGAAGCGATGATTGC..................................................................................... 23 0 20 3.05 61 49 12 0
.....................................................................................................................................................................................................................TATATTGACCGAAGTTACTCTAGCC............. 25 0 1 1.00 1 0 1 0
.....................................................................................................................................................................................................................TATATTGACCGAAGTTACTCTAGCCTC........... 27 0 1 1.00 1 1 0 0
..........................................................................................................................................................................................................................TGATCGAAGTTACTCTAGCCTCTAAC....... 26 1 1 1.00 1 0 1 0
...........................................................TGAAAGAGACAACGCAAAAGGG.......................................................................................................................................................................... 22 0 20 0.60 12 12 0 0
............................................................GAAAGAGACAACGCAAAAGGGAGAGCG.................................................................................................................................................................... 27 0 20 0.20 4 4 0 0
..................................................................................................................................................TACAATGAAGCGATGATTGCTGAGCC............................................................................... 26 0 20 0.20 4 4 0 0
...............................................................................................................................................AATTACAATGAAGCGATGATTGCTGAGCC............................................................................... 29 0 20 0.20 4 4 0 0
...TGCATACTAACTACAATGTACGCGAGC............................................................................................................................................................................................................................. 27 0 20 0.15 3 3 0 0
.............................................................................................................TACATGATAACATATTCTATGAACTGCC.................................................................................................................. 28 0 20 0.15 3 3 0 0
...TGCATACTAACTACAATGTACGCG................................................................................................................................................................................................................................ 24 0 20 0.10 2 2 0 0
...............................................................................................GTTACAAATTCTCTTACATGATA..................................................................................................................................... 23 0 20 0.10 2 0 2 0
............................................................................................TCCGTTACAAATTCTCTTACATGATAACA.................................................................................................................................. 29 0 20 0.10 2 0 2 0
.......................................................................................................................CATATTCTATGAACTGCCGCTC.............................................................................................................. 22 0 20 0.05 1 1 0 0
..........................................................................................................................ATTCTATGAACTGCCGCTCTTC........................................................................................................... 22 1 20 0.05 1 1 0 0
..............TGCAATGTACGCGAGCCTGCGGATT.................................................................................................................................................................................................................... 25 2 20 0.05 1 0 1 0
.............................................................................................................TACATGATAACATATTCTAT.......................................................................................................................... 20 0 20 0.05 1 1 0 0
.....................................................................................................................................................AATGAAGCGATGATTGCTGAGCC............................................................................... 23 0 20 0.05 1 0 1 0
..............................................................................................................................................TGATTACAATGAAGCGATGATTGC..................................................................................... 24 1 20 0.05 1 0 1 0
....................................................................................GCGTGATCTCCGTTACAAATTCTCTTACA.......................................................................................................................................... 29 0 20 0.05 1 1 0 0
.................AATGTACGCGAGCCGGCGGATTAAGC................................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0
...........................................................TGAAAGAGACAACGCAAAAGGGAGAAA..................................................................................................................................................................... 27 2 20 0.05 1 1 0 0
......................................................................................................................ACATATTCTATGAACTGCCGCTCTT............................................................................................................ 25 0 20 0.05 1 0 1 0
.............................................................AAAGAGACAACGCAAAAGGGAGA....................................................................................................................................................................... 23 0 20 0.05 1 1 0 0
.........................................................................................................................TATTCTATGAACTGCCGCTCTTCA.......................................................................................................... 24 1 20 0.05 1 1 0 0
.............................................................................................................TTCATGATAACATATTCTATGAACTGCC.................................................................................................................. 28 1 20 0.05 1 0 1 0
.........................................................................................................................TATTCTATGAACTGCCGCTCTTAA.......................................................................................................... 24 0 20 0.05 1 1 0 0
..........CAACTACAATGTACGCGAGCCGGCG........................................................................................................................................................................................................................ 25 1 20 0.05 1 0 1 0
.......................................................TTGGTGAAAGAGACAACGCAAAAGGG.......................................................................................................................................................................... 26 1 20 0.05 1 0 1 0
...............................................................................................................................................AATTACAATGCAGCGATGATTGC..................................................................................... 23 1 20 0.05 1 0 1 0
...............................................................................................................................................GATTACAATGAAGCGATGTTT....................................................................................... 21 2 20 0.05 1 0 1 0
...........................................................TGAAAGAGACAACGCAAAAGGGAGAGA..................................................................................................................................................................... 27 1 20 0.05 1 1 0 0
................................................................................................................................................ATTACAATGAAGCGATGATTGCTG................................................................................... 24 0 20 0.05 1 0 0 1
..........TAACTACAATGTACGCGAGCCGGC......................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0
.............CTACAATGTACGCGAGCCGGCGGAC..................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0
.............................................................AAAGAGACAACGCAAAAGGGAGAG...................................................................................................................................................................... 24 0 20 0.05 1 1 0 0

Anti-sense strand reads

TTAACGTATGATTGATGTTACATGCGCTCGGCCGCCTAATTCGACTCGGCCACGCACCCACTTTCTCTGTTGCGTTTTCCCTCTCGCACTAGAGGCAATGTTTAAGAGAATGTACTATTGTATAAGATACTTGACGGCGAGAATTAATGTTACTTCGCTACTAACGACTCGGGTTGTCATCAGAAACCGGTTTTAACACTACATTGGGGATTTATATAACTGGCTTCAATGAGATCGGAGATTGAAACCAT
*************************************************************************************...((((((........((.(((((......))))).))......)))))).(((((........)).)))......(((((...........)).)))........*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V056
head
 V041
embryo
..............................................CGGCCACGCACCCACTTTCTCTGT..................................................................................................................................................................................... 24 0 20 4.05 81 81 0 0 0 0
..............................................................................................................................ATACTTGACGGCGAGAATTAATGTTAC.................................................................................................. 27 0 20 1.30 26 0 26 0 0 0
...............................................GGCCACGCACCCACTTTCTCTGT..................................................................................................................................................................................... 23 0 20 1.15 23 0 23 0 0 0
..............................................CGGCCACGCACCCACTTTCTCTGTT.................................................................................................................................................................................... 25 0 20 0.95 19 0 19 0 0 0
.........................................CGACTCGGCCACGCACCCACTTTCTCTGT..................................................................................................................................................................................... 29 0 20 0.75 15 15 0 0 0 0
.............................................................................................................................GATACTTGACGGCGAGAATTAATGTTAC.................................................................................................. 28 0 20 0.60 12 0 0 12 0 0
..............................................................................CCCTCTCGCACTAGAGGCAATGTT..................................................................................................................................................... 24 0 20 0.60 12 12 0 0 0 0
............................................CTCGGCCACGCACCCACTTTCTCTGT..................................................................................................................................................................................... 26 0 20 0.30 6 0 6 0 0 0
...................................................................................................................................TGACGGCGAGAATTAATGTTAC.................................................................................................. 22 0 20 0.30 6 6 0 0 0 0
..................................................................................CTCGCACTAGAGGCAATGTTTAAG................................................................................................................................................. 24 0 20 0.20 4 0 2 2 0 0
.......................................................................GCGTTTTCCCTCTCGCACTAGAGGCAAT........................................................................................................................................................ 28 0 20 0.20 4 0 4 0 0 0
.................................................................................TCTCGCACTAGAGGCAATGTT..................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0
.........................................................................................................................................................................................................................................ATGGGAGATTGAAATCAT 18 2 9 0.11 1 0 0 1 0 0
...................................................................................................................................................................................................................................CATGAGCTTGGAGATTGAAA.... 20 3 9 0.11 1 0 0 0 1 0
.........................................CGACTCGGCCACGCACCCACT............................................................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0
........................................................................................................AGAGAATGTACTATTGTATAAGAT........................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
................................................................................................................................ACTTGACGGCGAGAATTAATGTT.................................................................................................... 23 0 20 0.10 2 0 2 0 0 0
.............................................................................................................................GATACTTGACGGCGAGAATTAATGTT.................................................................................................... 26 0 20 0.10 2 0 0 2 0 0
.............................................TCGGCCACGCACCCACTTTCTCCGT..................................................................................................................................................................................... 25 1 20 0.10 2 2 0 0 0 0
.............................................TCGGCCACGCACCCACTTTCTCTGTT.................................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0
..............................................................................................................TGTACTATTGTATAAGATACTTGAC.................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
...........................................ACTCGGCCACGCACCCACTTTCTCTGT..................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
.........................................CGACTCGGCCACGCACCCACTT............................................................................................................................................................................................ 22 0 20 0.10 2 0 2 0 0 0
..................................................................................CTCGCACTAGAGGCAATGTTTAAGAGAAT............................................................................................................................................ 29 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................TACTTGACGGCGAGAATTAATGTTACT................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
...................................................................................................GTTTAAGAGAATGTACTAT..................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
..................................................................CTGTTGCGTTTTCCCTCTCGCACTAG............................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
...........................................................................................................GAATGTACTATTGTATAAGAT........................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
.....................................................................TTGCGTTTTCCCTCTCGCACT................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
.....................................................................................GCACTAGAGGCAATGTTTAAG................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0
.............GATGTTACATGCGCTCGGCCGCCTAAT................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.............................GGCCGCCTAATTCGACTCG........................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.....................ATGCGCTCGGCCGCCTAATTCGACT............................................................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
...................................................ACGCACCCACTTTCTCTGTTGCGTTT.............................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
.............................................................................TCCCTCTCGCACTAGAGGCAATGTTGC................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0
.........................................CGACTCGGCCACGCACCCACTTTCTCTTT..................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0
..............................................CGGCCACGCACCCACTTTCTC........................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
..........................................................................................AGAGGCAATGTTTAAGAGAAT............................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
................................................................................................................................ACTTGACGGCCAGAATTAATGTTAC.................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................TACTTGACGGCGAGAATTAATGTTACTT................................................................................................ 28 0 20 0.05 1 0 1 0 0 0
................................................................................................................................ACTTGACGGCGAGAATTAG........................................................................................................ 19 1 20 0.05 1 0 1 0 0 0
............................................................................................................AATGTACTATTGTATAAGATACTTGA..................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................CGGCGAGAATTAATGTTACT................................................................................................. 20 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................GGACGGCGAGAATTAATGTTACTT................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
..............................................CGGCCACGCACCCACTTTCTCTGTC.................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
..................................................CACGCACCCACCTTCTCCGT..................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
.......................................................................................................AAGAGAATGTACTATTGTAT................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0
.............................................................................TCCCTCTCGCACTAGAGGCAATGTTCA................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
....................CATGCGCTCGGCCGCCTAATTCGA............................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 1 0
.................................................................................................................................CTTGACGGCGAGAATTAATGTTACGT................................................................................................ 26 1 20 0.05 1 1 0 0 0 0
................................................................................CTCTCGCACTAGAGGCAATT....................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
................................................GCCACGCACCCACTTTCTCTGTT.................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 1
..............................................................CTCTCTGTTGCGTTTTCCCTCTCGCACTA................................................................................................................................................................ 29 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................TTCGCTACTAACGACTCGGGC............................................................................. 21 1 20 0.05 1 0 1 0 0 0
...............................................................................CCTCTCGCACTAGAGGCAATGTTT.................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
........................................TCGACTCGGCCACGCACCCACTTTCT......................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
....................CATGCGCTCGGCCGCCTAATTCGACT............................................................................................................................................................................................................. 26 0 20 0.05 1 0 0 1 0 0
...............................................................TCTCTGTTGCGTTTTCCCTCT....................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
..............................................CGGCCACGCACCCACTTTCTCCGTT.................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
............................CGGCCGCCTAATTCGACTCG........................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................TTGACGGCGAGAATTAATGT..................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
...................................................................................................................TATTGTATAAGATACTTGACGGCGAGAAT........................................................................................................... 29 0 20 0.05 1 0 0 1 0 0
..........................................................................................................AGAATGTACTATTGTATAAGATACT........................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
....................................................................................CGCACTAGAGGCAATGTTTAAGAGA.............................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
..............................................CGGCCACGCACCCACTTTCTTTTT..................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0
.........................................................................................................................................CGAGAATTAATGTTACTTCGCTACT......................................................................................... 25 0 20 0.05 1 0 0 0 0 1
...................................................................................................................................TGACGGCGAGAATTAATGTTACTT................................................................................................ 24 0 20 0.05 1 0 0 1 0 0
........TGATTGATGTTACATGCGCTC.............................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
............................................................................................AGGCAATGTTTAAGAGAA............................................................................................................................................. 18 0 20 0.05 1 0 0 0 1 0
...............................................................................................CAATGTTTAAGAGAATGTAC........................................................................................................................................ 20 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................TAAGATACTTGACGGCGAGAA............................................................................................................ 21 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:15445170-15445420 - dmo_1172 AATTGCATACTAACTACAATGTACGCGAGCCGGCGGATTAAGCTGAGCCGGTGCGTGGGTGAAAGAGACAACGCAAAAGGGAGAGCGTGATCTCCGTTACAAATTCTCTTACATGATAACATATTCTATGAACTGCCGCTCTTAATTACAATGAAGCGATGATTGCTGAGCCCAACAGTAGTCTTTGGCCAAAATTGTGATGTAACCCCTAAATATATTGACCGA----------AGTTACTCTAGCCTCTAACTTTGGTA
droVir3 scaffold_13224:1743-1802 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAAAAAACGTAATGTAACCCCTTGCCATTTTGGCCGA----------TATGGGTCAAA-------ATTTAGA-
droAna3 scaffold_12916:7049411-7049467 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TGTGATGTAACCCCTTGTAAA---ATCCGGTATCCCCAAATAT------AGCCCCAAACAATAAC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AATTGCATACTAACTACAATGTACGCGAGCCGGCGGATTAAGCTGAGCCGGTGCGTGGGTGAAAGAGACAACGCAAAAGGGAGAGCGTGATCTCCGTTACAAATTCTCTTACATGATAACATATTCTATGAACTGCCGCTCTTAATTACAATGAAGCGATGATTGCTGAGCCCAACAGTAGTCTTTGGCCAAAATTGTGATGTAACCCCTAAATATATTGACCGA----------AGTTACTCTAGCCTCTAACTTTGGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................AATTACAATGAAGCGATGATTGC...............................................................................................23203.056149000120
.....................................................................................................................................................................................................................TATATTGACCGA----------AGTTACTCTAGCC.............2511.001000010
.....................................................................................................................................................................................................................TATATTGACCGA----------AGTTACTCTAGCCTC...........2711.001100000
...........................................................TGAAAGAGACAACGCAAAAGGG....................................................................................................................................................................................22200.60121200000
............................................................GAAAGAGACAACGCAAAAGGGAGAGCG..............................................................................................................................................................................27200.204400000
..................................................................................................................................................TACAATGAAGCGATGATTGCTGAGCC.........................................................................................26200.204400000
...............................................................................................................................................AATTACAATGAAGCGATGATTGCTGAGCC.........................................................................................29200.204400000
...TGCATACTAACTACAATGTACGCGAGC.......................................................................................................................................................................................................................................27200.153300000
.............................................................................................................TACATGATAACATATTCTATGAACTGCC............................................................................................................................28200.153300000
...TGCATACTAACTACAATGTACGCG..........................................................................................................................................................................................................................................24200.102200000
...............................................................................................GTTACAAATTCTCTTACATGATA...............................................................................................................................................23200.102000020
............................................................................................TCCGTTACAAATTCTCTTACATGATAACA............................................................................................................................................29200.102000020
.......................................................................................................................CATATTCTATGAACTGCCGCTC........................................................................................................................22200.051100000
..........................................................................................................................ATTCTATGAACTGCCGCTCTTC.....................................................................................................................22200.051100000
.............................................................................................................TACATGATAACATATTCTAT....................................................................................................................................20200.051100000
.....................................................................................................................................................AATGAAGCGATGATTGCTGAGCC.........................................................................................23200.051000010
....................................................................................GCGTGATCTCCGTTACAAATTCTCTTACA....................................................................................................................................................29200.051100000
.................AATGTACGCGAGCCGGCGGATTAAGC..........................................................................................................................................................................................................................26200.051000010
...........................................................TGAAAGAGACAACGCAAAAGGGAGAAA...............................................................................................................................................................................27200.051100000
......................................................................................................................ACATATTCTATGAACTGCCGCTCTT......................................................................................................................25200.051000010
.............................................................AAAGAGACAACGCAAAAGGGAGA.................................................................................................................................................................................23200.051100000
.........................................................................................................................TATTCTATGAACTGCCGCTCTTAA....................................................................................................................24200.051100000
...........................................................TGAAAGAGACAACGCAAAAGGGAGAGA...............................................................................................................................................................................27200.051100000
................................................................................................................................................ATTACAATGAAGCGATGATTGCTG.............................................................................................24200.051010000
..........TAACTACAATGTACGCGAGCCGGC...................................................................................................................................................................................................................................24200.051100000
.............CTACAATGTACGCGAGCCGGCGGAC...............................................................................................................................................................................................................................25200.051000010
.............................................................AAAGAGACAACGCAAAAGGGAGAG................................................................................................................................................................................24200.051100000
droVir3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAAAAAACGTAATGTAACCCCTTGCCATTTTGGCCGA----------TATGGGTCAAA-------ATTTAGA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................TAAAAAACGTAATGTAACCCCTTGC................................................25200.153000000000000100000000000110000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGATAAAAAACGTAATGTAACCC.....................................................25200.102001000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................TTTGATAAAAAACGTAATGTAACCCCT...................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ACGTAATGTAACCCCTTGCCATTTTGG........................................27200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAAAAAACGTAATGTAACCCCTTGCC...............................................26200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................TTGATAAAAAACGTAATGTAACCCC....................................................25200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................TGCCATTTTGGCCGA----------TATGGGTC..................23200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................ATGTAACCCCTTGCCATTTTGGCCGT----------C.........................27200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................AACGTAATGTAACCCCTTGCC...............................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AACGTAATGTAACCCCTTGCCA..............................................22200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AAAAAACGTAATGTAACCCCTTGC................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AAAAACGTAATGTAACCCCTTGCCATT............................................27200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CGTAATGTAACCCCTTGCCAT.............................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CCCCTTGCCATTTTGGCCGA----------T.........................21200.051000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................ACCCCTTGCCATTTTGGCCGT----------..........................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ATAAAAAACGTAATGTAACCCCTTGC................................................26200.051000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................TTTGATAAAAAACGTAATGTAACCCC....................................................26200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................TAACCCCTTGCCATTTTGGCCGA----------A.........................24200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTTGCCATTTTGGCCGA----------TA........................19200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGATAAAAAACGTAATGTAACCCCTTGC................................................28200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................TGCCATTTTGGCCGA----------TATGGGTCA.................24200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................TGTAACCCCTTGCCATTTTGGCC......................................23200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................TTGATAAAAAACGTAATGTAACCCCT...................................................26200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAAAAAACGTAATGTAACCCCTTGCCA..............................................27200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................GTAACCCCTTGCCATTTTGGCCG.....................................23200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AAACGTAATGTAACCCCTTGCC...............................................22200.051100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGATAAAAAACGTAATGTAACCCCT...................................................25200.051000000000000000000000000000000000010000000000000000000000000000
droAna3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TGTGATGTAACCCCTTGTAAA---ATCCGGTATCCCCAAATAT------AGCCCCAAACAATAAC-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
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Generated: 05/17/2015 at 11:52 PM