ID:

dmo_1081

 Coordinate:

scaffold_6496:10570629-10570901 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-91.7 -91.7 -91.5

Flybase annnotation

CDS [Dmoj\GI20410-cds]; CDS [Dmoj\GI20410-cds]; exon [dmoj_GLEANR_5269:1]; exon [dmoj_GLEANR_5269:2]; intron [Dmoj\GI20410-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGCGGCGGCTGCGAATGCCGAACGGGATTTCAATGTGAATGACTCACAGGTGAGGCGGGCGGCGGGGAGAGCAAACAAAGAATGCGTTGCATTGTTGCTGCTGCAGAAGCCAATGCAACAGCAACAGCAACAACTGCAGCAGCAACAAGCAACAGCAACAAGCAACAGCAACTGTAACTGCGGCCTGTCATTTGTCTGTTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAAATGCCGACAATGACTGGCTGCTTCTCTCACTCCACCGGCAGCCAGTGGTTAAACTCTTGAACTCTTTTGCGGTCTCTTTTGTAGGTGCCGGTCATAGAGCCGAAAGAGGCGCCCGCCTACAAGCAGGAGCCCTA
**************************************************..(((((..((((.((((((((...........((((((((.(((((((((((((((..((...(((....)))...)).....)))))))))))))))))))).)))...((..((((...))))..))((((((.((((((.(((.((...((((((.(((.((((.......))))))).))))))..)).))))))))).))))))..........((((.((...)).)))).....))))....)))).)))).))))).********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V041
embryo
 V110
male body		 V049
head
 V056
head
..................................................GTGAGGCGGGCGGCGGGGA................................................................................................................................................................................................................................................................................................................ 19 0 1 5.00 5 1 3 0 1 0 0
.....................................................................................................................................................................................................................................................................................................TCTTGAACTCTTTTGCGGTCTCT......................................................... 23 0 1 1.00 1 0 1 0 0 0 0
..................................................GTGAGGCGGGCGGCGGGGC................................................................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
...................CGAACGGGATTTCAATGTGAAT............................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................................TGGATTGATGATGCCTGACA.................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................TGGATTGATGATGCCTGACACAT................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGTGATAATTTTGATTGATGAT............................................................................................................................................................ 22 2 2 1.00 2 0 0 2 0 0 0
..................................................GTGAGGCGGGCTGCGGGGA................................................................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 1 0
.............................................................................................................................................................................................................TGGACTGATGATGCCTGACAC................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGAGATAATTTTGATTGATGAT............................................................................................................................................................ 22 3 5 0.60 3 0 0 3 0 0 0
...................................................................................................................................................................................................TGTGATAATTTTGTTTGATGAT............................................................................................................................................................ 22 3 9 0.56 5 0 0 5 0 0 0
...................................................................................................................................................................................................TGTGATAGTTTTGATTGATGAT............................................................................................................................................................ 22 3 6 0.17 1 0 0 0 0 0 1
.....................................................................................................................AACAGCAACAGCAACAACTGCAGC........................................................................................................................................................................................................................................ 24 0 6 0.17 1 0 1 0 0 0 0
.........................................................................................................................GCAACAGCAACAACTGCAGC........................................................................................................................................................................................................................................ 20 0 14 0.07 1 1 0 0 0 0 0
...........................................................................................................................AACAGCAACAACTGCAGCAGCA.................................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGTGATAATTTTCATTGATGA............................................................................................................................................................. 21 3 15 0.07 1 0 0 0 0 0 1
........................................................................................................................AGCAACAGCAACAACTGCA.......................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................AACAGCAACAGCAACAACTG............................................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ACCGCCGCCGACGCTTACGGCTTGCCCTAAAGTTACACTTACTGAGTGTCCACTCCGCCCGCCGCCCCTCTCGTTTGTTTCTTACGCAACGTAACAACGACGACGTCTTCGGTTACGTTGTCGTTGTCGTTGTTGACGTCGTCGTTGTTCGTTGTCGTTGTTCGTTGTCGTTGACATTGACGCCGGACAGTAAACAGACAATTAAAACTAACTACTACGGACTGTGTAAAGTGAACTTTTACGGCTGTTACTGACCGACGAAGAGAGTGAGGTGGCCGTCGGTCACCAATTTGAGAACTTGAGAAAACGCCAGAGAAAACATCCACGGCCAGTATCTCGGCTTTCTCCGCGGGCGGATGTTCGTCCTCGGGAT
*********************************************************..(((((..((((.((((((((...........((((((((.(((((((((((((((..((...(((....)))...)).....)))))))))))))))))))).)))...((..((((...))))..))((((((.((((((.(((.((...((((((.(((.((((.......))))))).))))))..)).))))))))).))))))..........((((.((...)).)))).....))))....)))).)))).))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M060
embryo
 M046
female body
....................................................................................................................................................TCGTTGTCGTTGTTCGTTG.............................................................................................................................................................................................................. 19 0 8 0.13 1 1 0 0
.............................................................................................................................................................................................................................................................................................CCAATCTGACATCTTGAGA..................................................................... 19 3 13 0.08 1 0 1 0
...........................................................CGCCGCCCCCCTAGCTTG........................................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:10570579-10570951 + dmo_1081 TGGCGGCGGCTGC---GAATGCCGAACGGGATTTCAATGTGAATGACTCACAGGT-------------------------------------GAGGCGGGCG----------------------------------GCGGGGA--GA---------------GCAAACAAAGAATGCGTTGC-AT------TGTTGCTGCTGCA--------------GAAG---------------------C---C------------A---ATGCA------ACAGCAACAGCA------ACAACTGCAGCAGC------------AACAAGCAACAGC---------------AACA--A----------G--------------------------------------------------------------------------------------------------------CAACAGCAACTGTAACTGCGGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAATGACTGGCTG---------C--------------------TTCTCTCACTCCACCGGCAGCCAGTGGTTAAACTCTTGAACTCTTTTGCGG----------------------TCTCTTTTGTAGGTGCCGGTCATAGAGCCGAAAGAGGCGCCCGCCTACAAGCAGGAGCCCT-A-------
droVir3 scaffold_12875:17437848-17438156 - dvi_7503 TGACGGCGGCGGCGACAAACGCTGAGCGGGATTTCAATGTGAACGACTCTCAGGT-------------------------------------AAG-CGGGCG------GAAGGCAGAAGGGGCAG------------ATGCCACA--------------------------GAATGCGCTGC-TT------TGTTGC--------------------------------------------------------------------------------------------------------AACTTCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGACTGCGGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAAT---TGACTG--------------------------CAACTGCTGCAACTCAA--------CAATTGTTAACTCTTTGAACTCTTGTGCGGT----------------------TTTCTTTGTAGGTGCCCGTCATAGAGCCGAAAGATGCGCCCGCCTACCAGCAAGATCCAT-A-------
droGri2 scaffold_15245:16949310-16949657 - TGGCGGCAAATGC---------CGAGCGGGATTTCAATGTGAACGACTCTCAGGT-------------------------------------GAG-------TGGCGG------------GGGAGACGCATAAAAGCCTGCCGCA--------------------------GAATGCGTCGC-TT------TGTTGTTGTTGCC--------------ACA---------------------------------------GT---AGC------A-CAGCAGCAG------------CAGTA---------A------CC------AA------------------------------------C--------------CAGC------------------------------------------------------------------------------------------------T-----GCTTGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAATGA-TGGCTGAGTGGTCCG--GCGATTAGATTGTGGCCACTG------------------------TTTCAACTCTTGAACTCTTGCGTTGTTCTGCAT----------CGTTTTCTCTTTGTAGGTGCCCGTCATCGAGCCGAAAGATGCGCCCGCATACACGCAGGATCCAT-A-------
droWil2 scf2_1100000004909:3798022-3798180 - TGGCGGTGGCGGC---------AAAG-----------------------------G----------------------------------------------TGGCGG------------CGGAGTTGTCCAAGTGGGTGGACCACAATCTGGCGGTGTATTGG-----TTA----------TGGAGTC---------ATTGCA---ATC--------G---------TTA---------------CA------------G---CA---GC------AACAG---------------TTGCAACAACAGCATCAGC----------AGC---AGCAGCAG---CAGCAGCAACAAC---------------------------------------------------------------------------------------------------------------------------AACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------GC--------
dp5 3:16409741-16409967 - CTGTGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGC-------------CTGTCCCTTG-----TCTGCCTAACTTTGATGGATGATGCGTGACGCTTTTCATTTGAATTATGCAGTCGGCGACT-----------CCGATTCGATTAGATTGTCGTCGCCA--------CGA--------TAATGGCTTGAGCAATAAACCACAGAGCTGTTTGTCATGGTCGTCCCCCCTTTCCGTATTGTAGGTGCCTGTCATTGAGCCAAAGGATGTGCCCGCCTACAAGCAGGATCCCT-A-------
droPer2 scaffold_4:352368-352594 + CTGTGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGC-------------CTGTCCCTTG-----TCTGGCTAACTTTGATGGATGATGCGTGACGATTTTCATTTGAATTATGCAGTCGGCGACT-----------CCGATTCGATTAGATTGTCGTCGCCA--------CGA--------TAATGGCTTGAGCAATAAACCACAGAGCTGTTTGTCATGGTCGTCCCCCCTTTCCGTATTGTAGGTGCCTGTCATTGAGCCAAAGGATGTGCCCGCCTACAAGCAGGATCCCT-A-------
droAna3 scaffold_13340:5071919-5072107 + CACCAATGCG----------------------------------------------AATGCGAATGCGATTCCGACTTGCGATCCCCCAACCAA--------------------------CGTA-----------------------------------------------------GCTGCCCTTACCAA-----CAAC---CACACCACCA-----------AT---------T-------C---CAATATCACCACAGC---AGC------AGCAGCAGCAGCA------GCAACTGCAACTGCA---ACAGCCGCTGC----------CGCTGCCATTGCAGCAACAAC--------------------------TGGCA-------------------------------------------------------------------------------------CCACAACAAATGCAAAT-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------AC--------
droBip1 scf7180000396642:126488-126659 + CAGCAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------ACA---ACAGCAGCAGCAGCA-ACAACAAC---------------AACA------GAGAACTATGACCTCGCCTAGCGGTCAG-------TCGCCATTCGCCAGTGTTAGTTCCACTAGCGGTGGTGCTGCCACAAATAACGGTAATCCCAACAATAATGCCAACGATCTCGGCCACTCGATCA-------------------------------------------------------------------------------------------------------------------------------------------------GTA------------------------------------------------------------------------------------------------------------------ATC-------
droKik1 scf7180000302610:1225572-1225715 - TGACGGGGGCCAC---------CATGCTGCCCACCAGTGGG------------------------------------------CTCTCATCGTCCG-------------TGA------AT---------------------------------------------------------------------AG-----CAAC---AACAATGCTGGCGGC-----AGT---------------------------------GGCAGCA---ATAGCAGCAGCA------------AC---------AATGCCAACAGCAGCAGC-------------AGCAG---CAGCAACAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCAGC-A-------
droFic1 scf7180000453927:1460192-1460348 - TTGCGATCGGAGC---CGA---TGCGCGGCATCTCCATAAT----------------------------------------------------------------------------------------------------------------------------------CATTGAGTCGCCAGGATTGG-----CAAC---AGCAATA--------G---------CCA---------------------------CGGC---AGC------AGCAGAAGCAGAAGCAACTGC------AATT---GCAGCAGCAGCAGCA-GCAGCAGC---------------AACAGCA----------G--------------------------------------------------------------------------------------------------------CAACAGCAACTCAAGAA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GCCT------
droEle1 scf7180000491258:298693-298850 - GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---AGCA-----------G---------CAG---------------------------CAGC---AACA------ACATTAACAGCA------ACAACTGCAGCAGCAGCAGCAG----------TAACAAC---AACAG---CAGCAGAAACCGC---------------------------------------------------------------------------------------------------------------------------AGCAACGTCGACTGCGCTGCCACATGGGCAACTCAAA---------------------------------------------------------ACTGACTG--TG---------C--------------------TTTACTCTTTGCCTCAGCA--CAGTGGTTA-------------------------------------------------------------------------------------------------------A-A-------
droRho1 scf7180000776532:141495-141667 - AGCAACA-AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------CCTTGACTTTGACGTTGACA------------G---CG---GC------AACAG---CAGCAACAGC------AGTA---ACAGCAACAGCAACA-GCAACAGC---------------AACA------TGTAGCAGCAAC----------ATGCAG-------CATGCAGCATCTGTAGCCTGTTTTGCCTGTTTTGTTGCTGCTGCAGAC------------------------------------------------------------------------------------------------------------------------GAAG-ACGACGACGATTA----------------------------------------------------------------TTA------------------------------------------------------AAT----------------------------------------------GC--------
droBia1 scf7180000302126:1332534-1332728 - TGGAGCG-GGTGCTGCGGACG--GCCCAGCATCCCAACGAGAAG-----------G----------------------------------------------TGACGG------------CCCAGATGATCCAGCAGCAGCAGCAGAACATGCTGAGGT--TGC-----AGA----------CAGAGGC------GCAGCCGCG--------------ACAGCAGA---------------------------------TGCAACAACA---------GCAG------CAGCAGC------AGCA---GCAGCAGCAGCAGCA-GCAGCAGC---------------AACAGTT----------G--------------------------------------------------------------------------------------------------------CAGCAGCAATTGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------
droTak1 scf7180000415168:96684-96801 - GAACAACGAG----------------------------------------------TAAATG------------------------------------------------------------------------------------A---------------GC-----TGT----------CAAAGTTTTTAAT-----------------------G---------CAG---------------------------CAGC---CGCA------ACTGCAGCAGCA------ACAACTGCAGCAGCAACATCAG----------TAGC---AGCAGCAT---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------ATCAACA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------AC--------
droEug1 scf7180000409061:307533-307662 - GGCAGTTGAG----------------------------------------------CGAGCG----------------------------------------------A---------ACCGCA------------GCTGCAA--CT---------------GC-----AGT----------AACTGTC------GCTGCTGCA--------------ACAG---------------------C---A------------A---CATCAGC------AGCAG---------------TAGCAACAGCAGCAACAG---CAACA-GCAACAGC---------------AACA-------------G--------------------------------------------------------------------------------------------------------CAACAGCAACATCAACA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------
dm3 chrX:13793899-13794076 - GAGTGCA-TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-CGA-----CAAC---AACA-----------A---------CAA---------------------------CTGC---AGCA------ACAGCAACAGCA------ACAACTGCAGCAACAGCAACAAC----------TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACAACAACTTCGTGCTCACGTCTGTCAATTGAAATTCCTG-TTAAATTAAGCGGAAAATATTT---------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------AC--------
droSim2 x:8497810-8497933 - CAGGCG----------------------------------------------------AAGG----------------------------------------------A---------GGAGCA------------GCAGCAA--CA---------------GC-----AGC----------CAGAGTT------GCAGCAACA--------------TCAG---------------------C---A------------G---CAGCA------ACAGCAG---C---------------AACGACAGCAGCAGCAGCAACA-TCAACAGC---------------AACA-------------G--------------------------------------------------------------------------------------------------------CATCAGCAACTGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------
droSec2 scaffold_1:12950767-12950948 + TGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---A-----------------------------------------------------------------GCAGCAGCAGCAGCAACA---GCAACAGCAGCAGCAACAGCAACAG----------CAACAGC---AGCAG---CAGCAGCATCCACA-GTA---C--------------CGGCCACTTTAAAAATCCATTTGCAACTTTTAT---------------TGATGCCCAACATAGATTTAATTATGCCCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCAGCGGCCGCAAACGGTT------------TTTTCTG-------------------------------------------------------------------------------AGATCTC-T-------
droYak3 X:8102744-8102892 - GC--TGCTGCTGC---TGCTGCCAAAAGG--------TGTGGAGACCACGCAGCA-------------------------------------ACAG-------------CAA------AC---------------------------------------------------------------------AG-----CAAC---AGCAGCATCAGCAAC-----AATTGCTG---------------CA------------G---TT---------GCAGCAGCAGC---------------AACAACAGCAACAGCAACAAC-------------AGCAA---CAACAACAGCAAC------------------------------------------------------------------------------------------------------------------AACAAC------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA--------------------------------------------------------------------------------------------------------------------A-------
droEre2 scaffold_4820:1182673-1182814 - ACAAATTCAG--------------------------------------------------------------------------------------CCGGCA----------------------------------ACGGCAA--CT---------------GCACAGTAGTAACACATCGC-CG------CACTGCAGC-----------------------------------------------------------AGCAACA---------GCAGCAGCAGCA------ACAACAGCA---------ACAGCAACAGTA-GCAACAGC---------------AACAGCA----------G--------------------------------------------------------------------------------------------------------CAACAGCAACGGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------TCA------------------------------------------------------------------------------------------------------------------ACCTGCCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGGCGGCGGCTGC---GAATGCCGAACGGGATTTCAATGTGAATGACTCACAGGT-------------------------------------GAGGCGGGCG----------------------------------GCGGGGA--GA---------------GCAAACAAAGAATGCGTTGC-AT------TGTTGCTGCTGCA--------------GAAG---------------------C---C------------A---ATGCA------ACAGCAACAGCA------ACAACTGCAGCAGC------------AACAAGCAACAGC---------------AACA--A----------G--------------------------------------------------------------------------------------------------------CAACAGCAACTGTAACTGCGGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAATGACTGGCTG---------C--------------------TTCTCTCACTCCACCGGCAGCCAGTGGTTAAACTCTTGAACTCTTTTGCGG----------------------TCTCTTTTGTAGGTGCCGGTCATAGAGCCGAAAGAGGCGCCCGCCTACAAGCAGGAGCCCT-A-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................GT-------------------------------------GAGGCGGGCG----------------------------------GCGGGGA--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005300011
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGAACTCTTTTGCGG----------------------TCTCT.................................................................2311.001100000
.....................................................GT-------------------------------------GAGGCGGGCG----------------------------------GCGGGGC--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
......................CGAACGGGATTTCAATGTGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................................................................................................................................................A------ACAGCAACAGCA------ACAACTGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171100000
......................................................................................................................................................................................................................................................................................GCAACAGCA------ACAACTGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071000010
........................................................................................................................................................................................................................................................................................AACAGCA------ACAACTGCAGCAGC------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071000010
.....................................................................................................................................................................................................................................................................................AGCAACAGCA------ACAACTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
............................................................................................................................................................................................................................................................................A------ACAGCAACAGCA------ACAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droVir3
TGACGGCGGCGGCGACAAACGCTGAGCGGGATTTCAATGTGAACGACTCTCAGGT-------------------------------------AAG-CGGGCG------GAAGGCAGAAGGGGCAG------------ATGCCACA--------------------------GAATGCGCTGC-TT------TGTTGC--------------------------------------------------------------------------------------------------------AACTTCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGACTGCGGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAAT---TGACTG--------------------------CAACTGCTGCAACTCAA--------CAATTGTTAACTCTTTGAACTCTTGTGCGGT----------------------TTTCTTTGTAGGTGCCCGTCATAGAGCCGAAAGATGCGCCCGCCTACCAGCAAGATCCAT-A-------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACAC...............................................................................................................................................................................................................21181.008141811001003000000000000000103101020000000000000010440621510390000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACACAT.............................................................................................................................................................................................................23119.0019000100000000000000000000000000000000000000001101212321200020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACACA..............................................................................................................................................................................................................2218.008000100000000000000000000000000000000000000000001001011000030000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACA................................................................................................................................................................................................................2016.006220100000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACACAA.............................................................................................................................................................................................................2312.002020000000000000000000000000000000000000000000000000000000000000
TGACGGCGGCGGCGACAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................GAGCGGGATTTCAATGTGAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTGATGATGCCTGACACA..............................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGAC.................................................................................................................................................................................................................1911.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACACATTT...........................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGATTGATGATGCCTGACACA..............................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000010000000000000
....................................................................................................................................................................................................................................................................................................................GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGACTGCGGC-------------CTGC..........................................................................................................................................................................................................................................................1820.501000000000000000000000000000000000000000000000000000000000001000
droGri2
TGGCGGCAAATGC---------CGAGCGGGATTTCAATGTGAACGACTCTCAGGT-------------------------------------GAG-------TGGCGG------------GGGAGACGCATAAAAGCCTGCCGCA--------------------------GAATGCGTCGC-TT------TGTTGTTGTTGCC--------------ACA---------------------------------------GT---AGC------A-CAGCAGCAG------------CAGTA---------A------CC------AA------------------------------------C--------------CAGC------------------------------------------------------------------------------------------------T-----GCTTGC-------------CTGTCATTTG-----TCTG-TTAATTTTGATTGATGATGCCTGACACATTTCACTTGAAA-ATGCCGACAATGA-TGGCTGAGTGGTCCG--GCGATTAGATTGTGGCCACTG------------------------TTTCAACTCTTGAACTCTTGCGTTGTTCTGCAT----------CGTTTTCTCTTTGTAGGTGCCCGTCATCGAGCCGAAAGATGCGCCCGCATACACGCAGGATCCAT-A-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGATGATGCCTGACA................................................................................................................................................................................................................2012.00220
droWil2
TGGCGGTGGCGGC---------AAAG-----------------------------G----------------------------------------------TGGCGG------------CGGAGTTGTCCAAGTGGGTGGACCACAATCTGGCGGTGTATTGG-----TTA----------TGGAGTC---------ATTGCA---ATC--------G---------TTA---------------CA------------G---CA---GC------AACAG---------------TTGCAACAACAGCATCAGC----------AGC---AGCAGCAG---CAGCAGCAACAAC---------------------------------------------------------------------------------------------------------------------------AACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------GC--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................GTATTGG-----TTA----------TGGAGTC---------ATTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................................................GGAGTC---------ATTGCA---ATC--------G---------TTA---------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
..................................................................................................................................................AATCTGGCGGTGTATTGG-----TTA----------TGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........................................................................................................................GGAGTTGTCCAAGTGGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..........................................................................................................GG------------CGGAGTTGTCCAAGTGGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......................................................................................................................................................................................................ATTGCA---ATC--------G---------TTA---------------CA------------G---CA---GC------AACAG---------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................................................................................................................................................ATCTGGCGGTGTATTGG-----TTA----------TGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...............................................................................................................................................................................................................ATC--------G---------TTA---------------CA------------G---CA---GC------AACAG---------------TTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...........................................................................................................G------------CGGAGTTGTCCAAGTGGGTGGACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.........................................................................................................................................................................TTA----------TGGAGTC---------ATTGCA---ATC--------G---------TTA---------------CA------------G---CA---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.........................................................................................................................GGAGTTGTCCAAGTGGGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................................AACAACAGCATCAGC----------AGC---AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100100
.............................................................................................................................................................................................................................................................................................................AACAACAGCATCAGC----------AGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2150.40200020
......................................................................................................................................TGGGTGGACCACAATCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33110000
................................................................................................................................................................................................................................................................................................................AACAGCATCAGC----------AGC---AGCAGCAG---CA.............................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100010
..............................................................................................................................................................................................................................................................................................................ACAACAGCATCAGC----------AGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17100010
................................................................................................................................................................................................................................................................................................................AACAGCATCAGC----------AGC---AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................21100.10100100
.............................................................................................................................................................................................................................................................................................................AACAACAGCATCAGC----------AGC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................18160.06100010
................................................................................................................................................................................................................................................................................................................AACAGCATCAGC----------AGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
......................................................................................................................................................................................................................................................................................................................ATCAGC----------AGC---AGCAGCAG---CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
dp5
CTGTGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGC-------------CTGTCCCTTG-----TCTGCCTAACTTTGATGGATGATGCGTGACGCTTTTCATTTGAATTATGCAGTCGGCGACT-----------CCGATTCGATTAGATTGTCGTCGCCA--------CGA--------TAATGGCTTGAGCAATAAACCACAGAGCTGTTTGTCATGGTCGTCCCCCCTTTCCGTATTGTAGGTGCCTGTCATTGAGCCAAAGGATGTGCCCGCCTACAAGCAGGATCCCT-A-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAGCCAAAGGATGT................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACCACAGAGCTGTTTGTC......................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTAGATTGTCGTCGCC..............................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCTTTCCGTATTGTAG..........................................................2011.0010100000000
droPer2
CTGTGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGC-------------CTGTCCCTTG-----TCTGGCTAACTTTGATGGATGATGCGTGACGATTTTCATTTGAATTATGCAGTCGGCGACT-----------CCGATTCGATTAGATTGTCGTCGCCA--------CGA--------TAATGGCTTGAGCAATAAACCACAGAGCTGTTTGTCATGGTCGTCCCCCCTTTCCGTATTGTAGGTGCCTGTCATTGAGCCAAAGGATGTGCCCGCCTACAAGCAGGATCCCT-A-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCAGTCGGCGACT-----------CCGATTCG...............................................................................................................................................................2611.001100000
droAna3
CACCAATGCG----------------------------------------------AATGCGAATGCGATTCCGACTTGCGATCCCCCAACCAA--------------------------CGTA-----------------------------------------------------GCTGCCCTTACCAA-----CAAC---CACACCACCA-----------AT---------T-------C---CAATATCACCACAGC---AGC------AGCAGCAGCAGCA------GCAACTGCAACTGCA---ACAGCCGCTGC----------CGCTGCCATTGCAGCAACAAC--------------------------TGGCA-------------------------------------------------------------------------------------CCACAACAAATGCAAAT-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------AC--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................TGCAACTGCA---ACAGCCGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
.....................................................................................................................................................................................................................................................................C---AGC------AGCAGCAGCAGCA------GCAACTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.171100000
..................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA------GCAACTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.061010000
...............................................................................................................................................................................................................................................................CCACAGC---AGC------AGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
................................................................................................................................................................................................................................................................CACAGC---AGC------AGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
....................................................................................................................................................................................................................................................................GC---AGC------AGCAGCAGCAGCA------GCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
...........................................................................................................................................................................................................................................................................C------AGCAGCAGCAGCA------GCAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
CAGCAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------ACA---ACAGCAGCAGCAGCA-ACAACAAC---------------AACA------GAGAACTATGACCTCGCCTAGCGGTCAG-------TCGCCATTCGCCAGTGTTAGTTCCACTAGCGGTGGTGCTGCCACAAATAACGGTAATCCCAACAATAATGCCAACGATCTCGGCCACTCGATCA-------------------------------------------------------------------------------------------------------------------------------------------------GTA------------------------------------------------------------------------------------------------------------------ATC-------SizeHit CountTotal NormTotal
No Reads
droKik1
TGACGGGGGCCAC---------CATGCTGCCCACCAGTGGG------------------------------------------CTCTCATCGTCCG-------------TGA------AT---------------------------------------------------------------------AG-----CAAC---AACAATGCTGGCGGC-----AGT---------------------------------GGCAGCA---ATAGCAGCAGCA------------AC---------AATGCCAACAGCAGCAGC-------------AGCAG---CAGCAACAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCAGC-A-------SizeHit CountTotal NormTotal
No Reads
droFic1
TTGCGATCGGAGC---CGA---TGCGCGGCATCTCCATAAT----------------------------------------------------------------------------------------------------------------------------------CATTGAGTCGCCAGGATTGG-----CAAC---AGCAATA--------G---------CCA---------------------------CGGC---AGC------AGCAGAAGCAGAAGCAACTGC------AATT---GCAGCAGCAGCAGCA-GCAGCAGC---------------AACAGCA----------G--------------------------------------------------------------------------------------------------------CAACAGCAACTCAAGAA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GCCT------SizeHit CountTotal NormTotal
No Reads
droEle1
GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---AGCA-----------G---------CAG---------------------------CAGC---AACA------ACATTAACAGCA------ACAACTGCAGCAGCAGCAGCAG----------TAACAAC---AACAG---CAGCAGAAACCGC---------------------------------------------------------------------------------------------------------------------------AGCAACGTCGACTGCGCTGCCACATGGGCAACTCAAA---------------------------------------------------------ACTGACTG--TG---------C--------------------TTTACTCTTTGCCTCAGCA--CAGTGGTTA-------------------------------------------------------------------------------------------------------A-A-------SizeHit CountTotal NormTotal
No Reads
droRho1
AGCAACA-AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------CCTTGACTTTGACGTTGACA------------G---CG---GC------AACAG---CAGCAACAGC------AGTA---ACAGCAACAGCAACA-GCAACAGC---------------AACA------TGTAGCAGCAAC----------ATGCAG-------CATGCAGCATCTGTAGCCTGTTTTGCCTGTTTTGTTGCTGCTGCAGAC------------------------------------------------------------------------------------------------------------------------GAAG-ACGACGACGATTA----------------------------------------------------------------TTA------------------------------------------------------AAT----------------------------------------------GC--------SizeHit CountTotal NormTotal
No Reads
droBia1
TGGAGCG-GGTGCTGCGGACG--GCCCAGCATCCCAACGAGAAG-----------G----------------------------------------------TGACGG------------CCCAGATGATCCAGCAGCAGCAGCAGAACATGCTGAGGT--TGC-----AGA----------CAGAGGC------GCAGCCGCG--------------ACAGCAGA---------------------------------TGCAACAACA---------GCAG------CAGCAGC------AGCA---GCAGCAGCAGCAGCA-GCAGCAGC---------------AACAGTT----------G--------------------------------------------------------------------------------------------------------CAGCAGCAATTGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------SizeHit CountTotal NormTotal
No Reads
droTak1
GAACAACGAG----------------------------------------------TAAATG------------------------------------------------------------------------------------A---------------GC-----TGT----------CAAAGTTTTTAAT-----------------------G---------CAG---------------------------CAGC---CGCA------ACTGCAGCAGCA------ACAACTGCAGCAGCAACATCAG----------TAGC---AGCAGCAT---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------ATCAACA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------AC--------SizeHit CountTotal NormTotal
No Reads
droEug1
GGCAGTTGAG----------------------------------------------CGAGCG----------------------------------------------A---------ACCGCA------------GCTGCAA--CT---------------GC-----AGT----------AACTGTC------GCTGCTGCA--------------ACAG---------------------C---A------------A---CATCAGC------AGCAG---------------TAGCAACAGCAGCAACAG---CAACA-GCAACAGC---------------AACA-------------G--------------------------------------------------------------------------------------------------------CAACAGCAACATCAACA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------SizeHit CountTotal NormTotal
No Reads
dm3
GAGTGCA-TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-CGA-----CAAC---AACA-----------A---------CAA---------------------------CTGC---AGCA------ACAGCAACAGCA------ACAACTGCAGCAACAGCAACAAC----------TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACAACAACTTCGTGCTCACGTCTGTCAATTGAAATTCCTG-TTAAATTAAGCGGAAAATATTT---------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------AC--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................CCCAGA-CGA-----CAAC---AACA-----------A---------CAA---------------------------CTGC---A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-CGA-----CAAC---A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
GAGTGCA-TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTCGTGCTCACGTCTGTCAAT......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAC----------TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AAC....................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTGAAATTCCTG-TTAAATTAAGCG..............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATTGAAATTCCTG-TTAAATTAAGCGG.............................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TTAAATTAAGCGGAAAATATT.....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TCATGCGTTGCCCAGA-CGA-----CAAC---AACA-----------A---------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTG-TTAAATTAAGCGGAAAATATT.....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGTCTGTCAATTGAAATTCCTG-T.........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGCA-TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-CGA-----C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AACAGCA------ACAACTGCAGCAACAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TGCGTTGCCCAGA-CGA-----CAAC---AACA-----------A---------CAA---------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TCATGCGTTGCCCAGA-CGA-----CAAC---AACA-----------A---------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------------------------------------------------------------------------AACAACAACAACTTCGTGCTCACGTC.............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ACTGCAGCAACAGCAACAAC----------TGC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGTCTGTCAATTGAAATTCCTG-TT........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCGTTGCCCAGA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................A------ACAGCAACAGCA------ACAACTGCAGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAAATTCCTG-TTAAATTAAGCGGA............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTCGTGCTCACGTCTGT..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................A-----------A---------CAA---------------------------CTGC---AGCA------ACAGCAACAGCA------AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGTGCTCACGTCTGTCAATTGAAA.................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTGAAATTCCTG-TTAAATTAAGCGGA............................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AC----------TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AAC....................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGCTCACGTCTGTCAATTGAAA.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAC----------TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AACA-----------A---------CAA---------------------------CTGC---AGCA------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.4040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AACAGCAACAAC----------TGC---AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACA................................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGC---AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................2490.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AACAAC----------TGC---AGCAGCAA---CA.............................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................A---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACA................................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGCAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACA...................................................................................................................................................................................................................................................................................25180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................C---AGCA------ACAGCAACAGCA------ACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACAAC..............................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACAACA.............................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGCAGCAA---CAGCAACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGC---AGCAGCAA---CAGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................C---AGCA------ACAGCAACAGCA------AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGC---AGCAGCAA---CAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACA...................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAGCAA---CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------------------AA.....................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACAGCAGC---------------------------------------------------------------------------------------------------------------------------AACAACAACAAG...........................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
CAGGCG----------------------------------------------------AAGG----------------------------------------------A---------GGAGCA------------GCAGCAA--CA---------------GC-----AGC----------CAGAGTT------GCAGCAACA--------------TCAG---------------------C---A------------G---CAGCA------ACAGCAG---C---------------AACGACAGCAGCAGCAGCAACA-TCAACAGC---------------AACA-------------G--------------------------------------------------------------------------------------------------------CATCAGCAACTGCAGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------------------------------------------------------------------------------------------------GC--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................GGAGCA------------GCAGCAA--CA---------------GC-----AGC----------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200002000000000000
............................................................................................................................................................................................................................AG---------------------C---A------------G---CAGCA------ACAGCAG---C---------------AACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.75300000300000000000
......................................................................................................................................................................................................GCAACA--------------TCAG---------------------C---A------------G---CAGCA------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
droSec2
TGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---A-----------------------------------------------------------------GCAGCAGCAGCAGCAACA---GCAACAGCAGCAGCAACAGCAACAG----------CAACAGC---AGCAG---CAGCAGCATCCACA-GTA---C--------------CGGCCACTTTAAAAATCCATTTGCAACTTTTAT---------------TGATGCCCAACATAGATTTAATTATGCCCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCAGCGGCCGCAAACGGTT------------TTTTCTG-------------------------------------------------------------------------------AGATCTC-T-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................A---GCAACAGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550041
..............................................................................................................................................................................................................................................................................................A---GCAACAGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2550050
........................................................................................................................................................................................................................................................................................AGCAACA---GCAACAGCAGCAGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.1711000
.....................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAGCAACAG----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810010
................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACA---GCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
..................................................................................................................................................................................................................................................................................................................CAGCAACAG----------CAACAGC---AGCAG---...............................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
....................................................................................................................................................................................................................................................................................................................GCAACAG----------CAACAGC---AGCAG---CAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510001
...............................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACA---GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001
...........................................................................................................................................................................................................................................................................................AACA---GCAACAGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
.....................................................................................................................................................................................................................................................................................................................CAACAG----------CAACAGC---AGCAG---C..............................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
......................................................................................................................................................................................................................................................................................................................AACAG----------CAACAGC---AGCAG---CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
droYak3
GC--TGCTGCTGC---TGCTGCCAAAAGG--------TGTGGAGACCACGCAGCA-------------------------------------ACAG-------------CAA------AC---------------------------------------------------------------------AG-----CAAC---AGCAGCATCAGCAAC-----AATTGCTG---------------CA------------G---TT---------GCAGCAGCAGC---------------AACAACAGCAACAGCAACAAC-------------AGCAA---CAACAACAGCAAC------------------------------------------------------------------------------------------------------------------AACAAC------AGCA-------------------------------------------------------------------------------------------------------------------------------------------------GCA--------------------------------------------------------------------------------------------------------------------A-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................AC-------------AGCAA---CAACAACAGCAAC------------------------------------------------------------------------------------------------------------------AACA............................................................................................................................................................................................................................................................................................2480.13101000000000
...........................................................................................................................................................................................................................................................................................AGC---------------AACAACAGCAACAGCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.09101000000000
.............................................................................................................................................................................................................................................................................................C---------------AACAACAGCAACAGCAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...................................................................................................................................................................................................................................................................................GCAGCAGCAGC---------------AACAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
..............................................................................................................................................................................................G-----CAAC---AGCAGCATCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
droEre2
ACAAATTCAG--------------------------------------------------------------------------------------CCGGCA----------------------------------ACGGCAA--CT---------------GCACAGTAGTAACACATCGC-CG------CACTGCAGC-----------------------------------------------------------AGCAACA---------GCAGCAGCAGCA------ACAACAGCA---------ACAGCAACAGTA-GCAACAGC---------------AACAGCA----------G--------------------------------------------------------------------------------------------------------CAACAGCAACGGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------TCA------------------------------------------------------------------------------------------------------------------ACCTGCCATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................TGCAGC-----------------------------------------------------------AGCAACA---------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000

Generated: 05/17/2015 at 11:40 PM