ID:

dmo_106

 Coordinate:

scaffold_6359:1639462-1639508 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAAGTGACCCTGGAGCGCTCTCTATGATTTTGTCTTCTTCCGCTTGTGTGTTGCCCTGCCGCTTGCACTGGTGCAGTCCACGCGACCGGGCAACACACTTAGCTGTTGATCATATTACCGATGCCTGAGTGAAGGTCTATCCACAGA
***********************************......(((.(((((((((((...(((.((.((((...)))).)).)))...)))))))))))..))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V056
head
 V049
head
 V110
male body		 V041
embryo
..................................................TTGCCCTGCCGCTTGCACTGGTG.......................................................................... 23 0 1 1232.00 1232 1187 38 3 4 0 0
..................................................TTGCCCTGCCGCTTGCACTGG............................................................................ 21 0 1 553.00 553 543 7 1 1 0 1
..................................................TTGCCCTGCCGCTTGCACTGGT........................................................................... 22 0 1 325.00 325 312 8 2 1 2 0
.........................................................................CAGTCCACGCGACCGGGCAACA.................................................... 22 0 1 203.00 203 162 21 9 4 4 3
..................................................TTGCCCTGCCGCTTGCACTGGTGT......................................................................... 24 1 1 159.00 159 142 1 3 4 9 0
..................................................TTGCCCTGCCGCTTGCACTG............................................................................. 20 0 1 74.00 74 69 0 2 2 1 0
...................................................TGCCCTGCCGCTTGCACTGGTG.......................................................................... 22 0 1 52.00 52 52 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACT.............................................................................. 19 0 1 34.00 34 30 0 3 1 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTT.......................................................................... 23 1 1 33.00 33 32 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGA......................................................................... 24 1 1 32.00 32 32 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGC......................................................................... 24 0 1 29.00 29 28 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTC.......................................................................... 23 1 1 18.00 18 17 0 0 1 0 0
..........................................................................AGTCCACGCGACCGGGCAACA.................................................... 21 0 1 16.00 16 16 0 0 0 0 0
..................................................TTGCCCTGCCGGTTGCACTGGTG.......................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTGG............................................................................ 20 0 1 10.00 10 10 0 0 0 0 0
..................................................TTCCCCTGCCGCTTGCACTGGTG.......................................................................... 23 1 1 9.00 9 4 5 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCA........................................................................ 25 0 1 8.00 8 8 0 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGGC........................................................ 24 0 1 7.00 7 7 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTT........................................................................ 25 2 1 7.00 7 6 0 0 1 0 0
...................................................TGCCCTGCCGCTTGCACTGGTGT......................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
....................................................GCCCTGCCGCTTGCACTGGTG.......................................................................... 21 0 1 6.00 6 5 1 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGGCAACA.................................................... 28 0 1 6.00 6 6 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCAG....................................................................... 26 0 1 6.00 6 6 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTT............................................................................. 20 1 1 5.00 5 5 0 0 0 0 0
.................................................CTTGCCCTGCCGCTTGCACTGGTG.......................................................................... 24 1 1 5.00 5 5 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTGGT........................................................................... 21 0 1 5.00 5 5 0 0 0 0 0
..................................................TTGCCCTGCCGGTTGCACTGG............................................................................ 21 1 1 5.00 5 5 0 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGG......................................................... 23 0 1 5.00 5 5 0 0 0 0 0
.................................................GTTGCCCTGCCGCTTGCACTGGTG.......................................................................... 24 0 1 5.00 5 5 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCAC............................................................................... 18 0 1 5.00 5 4 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGGG.......................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGT............................................................................ 21 1 1 4.00 4 3 0 0 0 1 0
...................................................TGCCCTGCCGCTTGCACTGGTGA......................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................TGGCCCTGCCGCTTGCACTGGTG.......................................................................... 23 1 1 3.00 3 0 3 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTGGTGC......................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCAGT...................................................................... 27 0 1 3.00 3 3 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCAGTC..................................................................... 28 0 1 3.00 3 3 0 0 0 0 0
.................................................CTTGCCCTGCCGCTTGCACTGGT........................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................................ACTGGTGCAGTCCACGCGACCGGGC........................................................ 25 0 1 3.00 3 3 0 0 0 0 0
.................................................CTTGCCCTGCCGCTTGCACTGG............................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTG............................................................................. 19 0 1 3.00 3 3 0 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACCGGGC........................................................ 23 0 1 3.00 3 3 0 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACCGGGCAACA.................................................... 27 0 1 3.00 3 3 0 0 0 0 0
...........................................................................GTCCACGCGACCGGGCAACA.................................................... 20 0 1 3.00 3 3 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGAT........................................................................ 25 2 1 2.00 2 2 0 0 0 0 0
.................................................ATTGCCCTGCCGCTTGCACTGGTG.......................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTCT......................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGATTGCACTGGTG.......................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TGGCCCTGCCGCTTGCACTGGTGT......................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACC............................................................ 19 0 1 2.00 2 2 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGGGCAAC..................................................... 21 0 1 2.00 2 1 1 0 0 0 0
..........................................................................AGTCCACGCGACCGGGCAAC..................................................... 20 0 1 2.00 2 2 0 0 0 0 0
.....................................................................GGTGCAGTCCACGCGACCGGGC........................................................ 22 0 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGCCTGCACTGG............................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................................CCACGCGACCGGGCAACACACTT............................................... 23 0 1 2.00 2 1 0 0 1 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCAGTT..................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGGGCAA...................................................... 20 0 1 2.00 2 2 0 0 0 0 0
..................................................TTCCCCTGCCGCTTGCACTGG............................................................................ 21 1 1 2.00 2 0 2 0 0 0 0
................................................TGTTGCCCTGCCGCTTGCACTGGTG.......................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTC........................................................................ 25 2 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTTT......................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TTTCCCTGCCGCTTGCACTGGTG.......................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.....................................................................GGTGCAGTCCACGCGACCG........................................................... 19 0 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGATTGCACTGG............................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGGCA....................................................... 25 0 1 2.00 2 2 0 0 0 0 0
..............................................TGTGTTGCCCTGCCGCTTGCA................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0
...........................................................................GTCCACGCGACCGGGCAAC..................................................... 19 0 1 2.00 2 2 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGA........................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.........................................................................CACTCCACGCGACCGGGCAACA.................................................... 22 1 1 2.00 2 0 2 0 0 0 0
..................................................TTGCCCTGCCACTTGCACTGG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGCAGC...................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCCGCCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCCCCTGCCGCTTGCACTG............................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCCTGCCGGTTGCACTGGTGT......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................................GGTGCAGTCCACGCGACCGG.......................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTTCCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGATTGCACTGGT........................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................................TCAGTCCACGCGACCGGGCAACA.................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGGGC........................................................ 18 0 1 1.00 1 1 0 0 0 0 0
.................................................TTTGCCCTGCCGCTTGCACTGGT........................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...............................................................TGCACTGGTGCAGTCCACGCGACCGGG......................................................... 27 0 1 1.00 1 1 0 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACCGGG......................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTGGA........................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................GTGCAGTCCACGCGACCGGG......................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTA.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................TTGTGTGTTGCCCTGCCGCTC................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCGCTGG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................CCACGCGACCGGGCAACACACT................................................ 22 0 1 1.00 1 0 0 0 0 1 0
.............................................CAGGGTTGCCCTGCCGCTTGCACT.............................................................................. 24 3 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGCGCAACA.................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTTT....................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGTACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...................................................TTCCCTGCCGCTTGCACTGGTG.......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..........................................................................AGTCCACGCGACCGAGCAACA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................CTTGCCCTGCCGCTTGCACTGGTGC......................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.....................................................................GGTGCAGTCCACGCGACC............................................................ 18 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTG........................................................................ 25 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGTCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................GCAGTCCACGCGACCGGGC........................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTTCACTGG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...........................................TTGTGTGTTGCCCTGCCGCTTGC................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
................................................TCTTGCCCTGCCGCTTGCACTGG............................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
....................................................GCCCTGCCGCTTGCACTGG............................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..................................................TGGCCCTGCCGCTTGCACTGG............................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGAGT......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
................................................GCTTGCCCTGCCGCTTGCACTGGTG.......................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..................................................TGGCCCTGCCGCTTGCACTGGT........................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCG........................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGATTGCACTGGTGA......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..............................................TGTGTTGCCCTGCCGCTTGCACT.............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCCCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGAACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGGCAA...................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................CGCTTGCACTGGTGCAGTCCACGCGAC............................................................. 27 0 1 1.00 1 1 0 0 0 0 0
........................................................................GCAGTCCACGCGACCGGGCAACC.................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...............................................CTTTTGCCCTGCCGCTTGCACTGG............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGCCCACGCGACCGGGCAACA.................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTGTCCTGCCGCTTGCACTGG............................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCCTGCCGGTTGCACT.............................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGGCT....................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACT.............................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
....................................................................TGGTGCAGTCCGCGCGACCGGGC........................................................ 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACCG........................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGATTGCACTCGTGCAGT...................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTCCCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCACTGCCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................TGGTGCAGTCCACGCGACCGGGCT....................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................TGTTTTGCCCTGCCGCTTGCACT.............................................................................. 23 1 1 1.00 1 0 1 0 0 0 0
.................................................CTTGCCCTGCCGCTTGCACTGGTGT......................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGTTTGCACTGGT........................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGTTTC......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
............................TTTGTCTTCTTCCGCTTGTGTG................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
...................................................TGCCCTGCCGCTTGCACTGT............................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTC............................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGGGCAACC.................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTAA......................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGC............................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................TGCACTGGTGCAGTCCACGCGACCGGGC........................................................ 28 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGGGT......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGG......................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCCCCTGCCGCTTGCACTGGTGT......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...................................................AGCCCTGCCGCTTGCACTGG............................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
......................................................CCTGCCGCTTGCACTGGTG.......................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGGTTGCACTGGTGC......................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................CTGGTGCAGTCCACGCGACCGGGA........................................................ 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGGACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................GCTTGCACTGGTGCAGTCCACGCGACC............................................................ 27 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTTTT........................................................................ 25 3 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGTCCACTCGACCGGGCAACC.................................................... 22 2 1 1.00 1 0 0 0 1 0 0
....................................................GCCCTGCCGCTTGCACTGGTGC......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
................................................................................CGCGACCGGGCAACACACTTAG............................................. 22 0 1 1.00 1 0 0 0 0 0 1
..................................................TTGCCCTGCCGCTTGCACCGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...................................................TGCCCTGCCGCTTGCACTGGTGTT........................................................................ 24 2 1 1.00 1 1 0 0 0 0 0
.......................................................................TGCAGTCCACGCGACCGGGCT....................................................... 21 1 1 1.00 1 0 0 0 1 0 0
..................................................TTCCCCTGCCGCTTGCACTGGTGA......................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTTC......................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................CACGCGACCGGGCAACACACT................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGTCCTGCCGCTTGTACTGG............................................................................ 21 2 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGC........................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..............................................TGTGTTGCCCTGCCGCTTGCAC............................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.......................................................................TGCAGTCCACGCGACCGGGC........................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGTCCTGCCGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.........................................................................CAGTCCACGCGGCCGGGCAACA.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGGTCCTGCCGCTTGCACTGGTG.......................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.........................................................................AAGTCCACGCGACCGGGCAACA.................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.....GACCCTGGAGCGCTCTCTATGATT...................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGGCGCTTGCACTGG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGTCCACGCGACCGGGCAACT.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................CACTGGTGCAGTCCACGCGACCG........................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTA........................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
........................TGATTTTGTCTTCTTCCGCT....................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
................................................ATTTGCCCTGCCGCTTGCACTGG............................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
................................................CTTTGCCCTGCCGCTTGCACTGG............................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
.................................................TTTGCCCTGCCGCTTGCACT.............................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................TGCACTGGTGCAGTCCACGCGAC............................................................. 23 0 1 1.00 1 0 1 0 0 0 0
.............................................................................CCACGCGACCGGGCAACACAC................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................GGTGCAGTCCACGCGACCGGGCAA...................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................................TGCAGTCCACGCGACCGGGCAA...................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTCGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCACTGGTGTAT....................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCTGCGGCTTGCACTGGTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................GTCCACGCGACCGGGCAACACA.................................................. 22 0 1 1.00 1 0 1 0 0 0 0
..................................................TTGCCTTGCCGCTTGCACTGG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................CCACGCGACCGGGCAACGCACTTT.............................................. 24 2 1 1.00 1 0 0 1 0 0 0
..................................................TTGCCCTGCTGCTTGCACTT............................................................................. 20 2 6 0.17 1 1 0 0 0 0 0
..................................................TTGCCCTGCCGCTTGCTTT.............................................................................. 19 2 9 0.11 1 1 0 0 0 0 0
.........................................................GCCGCTTGCACTGGTGTT........................................................................ 18 2 9 0.11 1 1 0 0 0 0 0

Anti-sense strand reads

TTTCACTGGGACCTCGCGAGAGATACTAAAACAGAAGAAGGCGAACACACAACGGGACGGCGAACGTGACCACGTCAGGTGCGCTGGCCCGTTGTGTGAATCGACAACTAGTATAATGGCTACGGACTCACTTCCAGATAGGTGTCT
***********************************......(((.(((((((((((...(((.((.((((...)))).)).)))...)))))))))))..))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total V049
head
 V110
male body		 M060
embryo
.............................................................................GGTGCGTAGGCCCGTTGTGGGA................................................ 22 3 1 1.00 1 0 1 0
...........................................................................................................CCCGTATAATGGCTACGGAAT................... 21 3 1 1.00 1 1 0 0
....................................................................ACCACGTCCGGTGCGATGG............................................................ 19 2 3 0.33 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6359:1639412-1639558 - dmo_106 AAAGTGACCCTGGAGCGCTCTCTATGATTTTGTCTTCTTCCGCTTGTGTGTTGCCCTGCCGCTTGCACT-------------GG----------TGCAGTCCACGCGACCGGGCAACACACTTAGCTGTTGATCATATTACCGATGCCTGAGTGAAGGTCTATCCACAGA
droVir3 scaffold_13042:1711838-1711933 - ACA-----------------------AGTTTGTCTTCTTCTGCCTGTGTGTTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGGCGAGTAGGCAACGCATTTCGCCGTCGATTATATTCCG----------------------------
droWil2 scf2_1100000004590:3603423-3603425 - GAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:130480-130588 + GGC--ATCCTTGGAGTGCTCTTTCAGTT---------------------CTGGCCCACTGGCTCACAGCTGCAACTGCAACTGGGAAAACCTTTTGTGGTCCAGGCCAACAGACAACACACTTGACTGATGA--------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAAGTGACCCTGGAGCGCTCTCTATGATTTTGTCTTCTTCCGCTTGTGTGTTGCCCTGCCGCTTGCACT-------------GG----------TGCAGTCCACGCGACCGGGCAACACACTTAGCTGTTGATCATATTACCGATGCCTGAGTGAAGGTCTATCCACAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TG..........................................................................2311232.0012321187043380
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------............................................................................211553.0055354311170
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------T...........................................................................221325.0032531201282
................................................................................................CAGTCCACGCGACCGGGCAACA....................................................221203.00203162349214
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGT.........................................................................241159.0015914204319
..................................................TTGCCCTGCCGCTTGCACT-------------G.......................................................................................20174.00746902201
...................................................TGCCCTGCCGCTTGCACT-------------GG----------TG..........................................................................22152.00525200000
..................................................TTGCCCTGCCGCTTGCACT-------------........................................................................................19134.00343001300
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TT..........................................................................23133.00333200010
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGA.........................................................................24132.00323200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGC.........................................................................24129.00292800010
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TC..........................................................................23118.00181701000
.................................................................................................AGTCCACGCGACCGGGCAACA....................................................21116.00161600000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------............................................................................20110.00101000000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCA........................................................................2518.008800000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGGC........................................................2417.007700000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGTT........................................................................2517.007601000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------TGT.........................................................................2316.006600000
....................................................GCCCTGCCGCTTGCACT-------------GG----------TG..........................................................................2116.006500010
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGGCAACA....................................................2816.006600000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCAG.......................................................................2616.006600000
..................................................TTGCCCTGCCGCTTGCACT-------------T.......................................................................................2015.005500000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------T...........................................................................2115.005500000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGG.........................................................2315.005500000
.................................................GTTGCCCTGCCGCTTGCACT-------------GG----------TG..........................................................................2415.005500000
..................................................TTGCCCTGCCGCTTGCAC......................................................................................................1815.005400010
..................................................TTGCCCTGCCGCTTGCACT-------------GT----------............................................................................2114.004300001
...................................................TGCCCTGCCGCTTGCACT-------------GG----------TGA.........................................................................2313.003300000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------TGC.........................................................................2313.003300000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCAGT......................................................................2713.003300000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCAGTC.....................................................................2813.003300000
..................................................................ACT-------------GG----------TGCAGTCCACGCGACCGGGC........................................................2513.003300000
...................................................TGCCCTGCCGCTTGCACT-------------G.......................................................................................1913.003300000
....................................................................T-------------GG----------TGCAGTCCACGCGACCGGGC........................................................2313.003300000
....................................................................T-------------GG----------TGCAGTCCACGCGACCGGGCAACA....................................................2713.003300000
..................................................................................................GTCCACGCGACCGGGCAACA....................................................2013.003300000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGAT........................................................................2512.002200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TCT.........................................................................2412.002200000
....................................................................T-------------GG----------TGCAGTCCACGCGACC............................................................1912.002200000
................................................................................................CAGTCCACGCGACCGGGCAAC.....................................................2112.002100010
.................................................................................................AGTCCACGCGACCGGGCAAC.....................................................2012.002200000
..................................................................................GG----------TGCAGTCCACGCGACCGGGC........................................................2212.002200000
....................................................................................................CCACGCGACCGGGCAACACACTT...............................................2312.002101000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCAGTT.....................................................................2812.002200000
................................................................................................CAGTCCACGCGACCGGGCAA......................................................2012.002200000
................................................TGTTGCCCTGCCGCTTGCACT-------------GG----------TG..........................................................................2512.002200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGTC........................................................................2512.002200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TTT.........................................................................2412.002200000
..................................................................................GG----------TGCAGTCCACGCGACCG...........................................................1912.002200000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGGCA.......................................................2512.002200000
..............................................TGTGTTGCCCTGCCGCTTGCA.......................................................................................................2112.002200000
..................................................................................................GTCCACGCGACCGGGCAAC.....................................................1912.002200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------A...........................................................................2212.002200000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGCAGC......................................................................2711.001100000
..................................................................................GG----------TGCAGTCCACGCGACCGG..........................................................2011.001100000
................................................................................................CAGTCCACGCGACCGGGC........................................................1811.001100000
...............................................................TGCACT-------------GG----------TGCAGTCCACGCGACCGGG.........................................................2711.001100000
....................................................................T-------------GG----------TGCAGTCCACGCGACCGGG.........................................................2211.001100000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------A...........................................................................2111.001100000
...................................................................................G----------TGCAGTCCACGCGACCGGG.........................................................2011.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TA..........................................................................2311.001100000
...........................................TTGTGTGTTGCCCTGCCGCTC..........................................................................................................2111.001100000
....................................................................................................CCACGCGACCGGGCAACACACT................................................2211.001000001
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGTTT.......................................................................2611.001100000
..................................................................................GG----------TGCAGTCCACGCGACC............................................................1811.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGTG........................................................................2511.001100000
...............................................................................................GCAGTCCACGCGACCGGGC........................................................1911.001100000
...........................................TTGTGTGTTGCCCTGCCGCTTGC........................................................................................................2311.001100000
....................................................GCCCTGCCGCTTGCACT-------------GG----------............................................................................1911.001100000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCG...........................................................2111.001100000
..............................................TGTGTTGCCCTGCCGCTTGCACT-------------........................................................................................2311.001100000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGGCAA......................................................2611.001100000
...........................................................CGCTTGCACT-------------GG----------TGCAGTCCACGCGAC.............................................................2711.001100000
...............................................................................................GCAGTCCACGCGACCGGGCAACC....................................................2311.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGGCT.......................................................................2611.001100000
...................................................TGCCCTGCCGCTTGCACT-------------........................................................................................1811.001100000
....................................................................T-------------GG----------TGCAGTCCACGCGACCG...........................................................2011.001100000
....................................................................T-------------GG----------TGCAGTCCACGCGACCGGGCT.......................................................2411.001100000
............................TTTGTCTTCTTCCGCTTGTGTG........................................................................................................................2211.001000100
...................................................TGCCCTGCCGCTTGCACT-------------GT----------............................................................................2011.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------C.......................................................................................2011.001100000
................................................................................................CAGTCCACGCGACCGGGCAACC....................................................2211.001001000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TAA.........................................................................2411.001000010
..................................................TTGCCCTGCCGCTTGCACT-------------GC----------............................................................................2111.001000010
...............................................................TGCACT-------------GG----------TGCAGTCCACGCGACCGGGC........................................................2811.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TGG.........................................................................2411.001100000
......................................................CCTGCCGCTTGCACT-------------GG----------TG..........................................................................1911.001100000
...................................................................CT-------------GG----------TGCAGTCCACGCGACCGGGA........................................................2411.001100000
............................................................GCTTGCACT-------------GG----------TGCAGTCCACGCGACC............................................................2711.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------TTTT........................................................................2511.001100000
....................................................GCCCTGCCGCTTGCACT-------------GG----------TGC.........................................................................2211.001100000
.......................................................................................................CGCGACCGGGCAACACACTTAG.............................................2211.001010000
...................................................TGCCCTGCCGCTTGCACT-------------GG----------TGTT........................................................................2411.001100000
..............................................................................................TGCAGTCCACGCGACCGGGCT.......................................................2111.001001000
.....................................................................................................CACGCGACCGGGCAACACACT................................................2111.001100000
..................................................TTGCCCTGCCGCTTGCACT-------------GG----------C...........................................................................2211.001000010
..............................................TGTGTTGCCCTGCCGCTTGCAC......................................................................................................2211.001000010
..............................................................................................TGCAGTCCACGCGACCGGGC........................................................2011.001100000
.....GACCCTGGAGCGCTCTCTATGATT.............................................................................................................................................2411.001100000
................................................................................................CAGTCCACGCGACCGGGCAACT....................................................2211.001100000
.................................................................CACT-------------GG----------TGCAGTCCACGCGACCG...........................................................2311.001100000
........................TGATTTTGTCTTCTTCCGCT..............................................................................................................................2011.001100000
...............................................................TGCACT-------------GG----------TGCAGTCCACGCGAC.............................................................2311.001000010
....................................................................................................CCACGCGACCGGGCAACACAC.................................................2111.001100000
..................................................................................GG----------TGCAGTCCACGCGACCGGGCAA......................................................2411.001100000
..............................................................................................TGCAGTCCACGCGACCGGGCAA......................................................2211.001100000
..................................................................................................GTCCACGCGACCGGGCAACACA..................................................2211.001000010
.........................................................GCCGCTTGCACT-------------GG----------TGTT........................................................................1890.111100000
droVir3
ACA-----------------------AGTTTGTCTTCTTCTGCCTGTGTGTTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGGCGAGTAGGCAACGCATTTCGCCGTCGATTATATTCCG----------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TG..........................................................................23194.00943101700001000000330412326000001411190300000100000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCA........................................................................25194.009423390000001000031131111500110106490000000000000000000000000000010
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------............................................................................21186.008678410000000000000000010600000117130000000000000000000000000000010
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGC.........................................................................24179.00790649000000000000001120140000042330000000000000000000000000000012
..................................................TTGCCCTCTCGCTCGCACT-------------G.......................................................................................20175.007561421010000000006114011301000041220200001100000000000000000000110
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TG..........................................................................22175.007566300000000000001011001000111107450000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGT.........................................................................23171.00711140002001000021130232100020713770400000000000000000000000000160
...................................................TGCCCTCTCGCTCGCACT-------------GG----------............................................................................20167.00674435000010000000000005000000083240000000000000000000000000000100
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------T...........................................................................22167.00673211000010000001205202250000086480200000200000000000000000000010
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGT......................................................................27165.00650070000000000112010004500200285190100000000000000000000000000124
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAG.......................................................................26159.0059311300000000000110210002000008141110000000000000000000000000000100
...................................................TGCCCTCTCGCTCGCACT-------------GG----------T...........................................................................21157.005730110000000000051020012101121511280000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGT.........................................................................24148.0048014000000000001324102320000044250200000000000000000000000000350
................................................................................................CAGTGCCGGCGAGTAGGCAAC.....................................................21142.0042622021000000000110103113100522060100001000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------........................................................................................19140.0040262003000000002300003210000046130100000000000000000000000000010
...................................................TGCCCTCTCGCTCGCACT-------------G.......................................................................................19135.0035329000000000002100210110001041150000000000000000000001000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCG..................................................................31133.00330000000000000000000000000000000000000000000000000000000000000033
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTG.....................................................................28129.0029107000000000000011010110010112060000000000000000000000000000005
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGG.................................................................32124.00240000000000000000000000000000000000000000000000000000000000000024
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGC....................................................................29116.00160013000000000000000000000000000000000000000000000000000000000003
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGC.........................................................................23115.00151010000000000000000010100000010010000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGGC................................................................33114.00140000000000000000000000000000000000000000000000000000000000000014
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCA........................................................................2419.009002000000000000100010000000020120000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGT....................................................................2918.008000000000000000001000000000003120000000000000000000000000000010
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGT.................................................................3218.008000000000000000000000000000000000000000000000000000000000000008
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCC...................................................................3017.007000000000000000000000000000000000000000000000000000000000000007
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGC....................................................................2817.007002000000000000000000000000000000000000000000000000000000000005
..................................................TTGCCCTCTCGCTCGCACT-------------GT----------............................................................................2117.007002000200000000000000000000000000100000000000000000000000000020
....................................................GCCCTCTCGCTCGCACT-------------GG----------............................................................................1915.005005000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTG.....................................................................2715.005000000000000000000000000000001110000000000000000000000000000002
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAG.......................................................................2515.005005000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGT......................................................................2615.005001000000000000000010100000001010000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------........................................................................................1815.005101000000000000000000000000001000000000000000000001000000010000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TC..........................................................................2315.005103000000000000000000000000010000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAA......................................................2015.005000001000100000001000010000000010000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAT.......................................................................2615.005002000000000001000000010000010000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAACG....................................................2215.005000000000010000000000110010100000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCAC......................................................................................................1824.509150000000000000000100000000010000000000100000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------T.......................................................................................2024.509101000000000002000010000000001020100000000000000000000000000000
..............................................................................................TGCAGTGCCGGCGAGTAGGCAA......................................................2214.004000000001010000000000000000100010000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCG..................................................................3014.004000000000000000000000000000000000000000000000000000000000000004
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTT.....................................................................2814.004002000000000000000000010000000010000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TC..........................................................................2214.004300000000000000000000000000010000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TT..........................................................................2214.004100000000000002000000100000000000000000000000000000000000000000
..............................................................................................TGCAGTGCCGGCGAGTAGG.........................................................1914.004001000200000000000000000000000000000000000000000000000000000010
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGT.................................................................3114.004000000000000000000000000000000000000000000000000000000000000004
...............................................................................................GCAGTGCCGGCGAGTAGGCAA......................................................2114.004000000002100000000000000000000000000000100000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAACC....................................................2214.004200000000000000000000000000001010000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGG.................................................................3114.004000000000000000000000000000000000000000000000000000000000000004
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGTT........................................................................2513.003010000000000001000000000000000010000000000000000000000000000000
....................................................................T-------------GG----------TGCAGTGCCGGCGAGTAGG.........................................................2213.003000000002000000000000000000000000000000000000000000000000001000
..................................................................................GG----------TGCAGTGCCGGCGAGTAGGCAAC.....................................................2513.003001000010000000000000010000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCT..................................................................3113.003000000000000000000000000000000000000000000000000000000000100011
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGTT........................................................................2413.003001000000000000000001010000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TT..........................................................................2313.003001000000000000000000100010000000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGT........................................................1813.003000000000000000000010001000010000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCT........................................................................2512.002010000000000000000000000000000100000000000000000000000000000000
....................................................................T-------------GG----------TGCAGTGCCGGCGAGTAGGCAA......................................................2512.002000000001000000000000000000000000000000000000000000000000001000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGA.................................................................3212.002000000000000000000000000000000000000000000000000000000000000002
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCC...................................................................2912.002002000000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TTT.........................................................................2412.002001000000000000000000000000000000000000000000000000000000000100
....................................................GCCCTCTCGCTCGCACT-------------GG----------TGCA........................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTCA....................................................................2812.002000000000000000000000000000000000000000000000000000000000000002
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAA.......................................................................2612.002001000000000000000000000000000010000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCC........................................................................2512.002011000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTC.....................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAACT....................................................2211.001000000000000001000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------G.......................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TCT.........................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................TGCAGTGCCGGCGAGTAGGCA.......................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCA.......................................................1911.001100000000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTC.....................................................................2811.001000000000000000000000100000000000000000000000000000000000000000
..................................................................................................GTGCCGGCGAGTAGGCAACGTCC.................................................2311.001000000000000000000000000000000010000000000000000000000000000000
.....................................................CCCTCTCGCTCGCACT-------------GG----------TGCAG.......................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................TTTGTCTTCTTCTGCCTGTGTGTTG.....................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................GG----------TGCAGTGCCGGCGAGTAGGC........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAC.......................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------GG----------TGCAG.......................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAAA.....................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.............................TTGTCTTCTTCTGCCTGTGTGTT......................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
....................................................................T-------------GG----------TGCAGTGCCGGCGAGTAGGC........................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCATC.................................................................3211.001000000000000000000000000000000000000000000000000000000000000001
..........................................................TCGCTCGCACT-------------GG----------TGCAGTGC....................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGTTA.......................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAGTT.....................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
............................................TGTGTGTTGCCCTCTCGCTCGC........................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TTA.........................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCA..................................................................3111.001000000000000000000000000000000000000000000000000000000000000001
................................................................................................CAGTGCCGGCGAGTAGGCATT.....................................................2111.001000000000000000000000001000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGA.........................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCGTA................................................................3311.001000000000000000000000000000000000000000000000000000000000000001
.....................................TTCTGCCTGTGTGTTGCCCTCTC..............................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------GG----------TGCAGTGC....................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGG.........................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGCAGTGCCGGCGAGTAGGCAACG....................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.....................................................CCCTCTCGCTCGCACT-------------GG----------T...........................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCC..................................................................3111.001000000000000000000000000000000000000000000000000000000000000001
...................................................................CT-------------GG----------TGCAGTGCCGGCGAGTAGGCAAC.....................................................2711.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................TGCAGTGCCGGCGAGTAGGCT.......................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................TCTTCTGCCTGTGTGTTGCCCTCTCGCT...........................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------GG----------TGT.........................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAACGC...................................................2311.001000000000000000000000000000000000000001000000000000000000000000
..................................................................ACT-------------GG----------TGCAGTGCCGGCG...............................................................1811.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................GCAGTGCCGGCGAGTAGG.........................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCG........................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GT----------............................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------G...........................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................ACT-------------GG----------TGCAGTGCCGGCGAA.............................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------GG----------TG..........................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................TTGTCTTCTTCTGCCTGTGTGTTG.....................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................CAGTGCCGGCGAGTAGGCAACA....................................................2211.001000000000000000010000000000000000000000000000000000000000000000
.........................................................CTCGCTCGCACT-------------GG----------TGCAGT......................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.....................................TTCTGCCTGTGTGTTGCCCTCTCGCT...........................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
.CA-----------------------AGTTTGTCTTCTTCTGCCTGTGTG........................................................................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
..................................................................................................GTGCCGGCGAGTAGGCAA......................................................1811.001000000000010000000000000000000000000000000000000000000000000000
..................................................................................GG----------TGCAGTGCCGGCGAGTAGG.........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................TTGTCTTCTTCTGCCTGTGTGTTGCCC..................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................TGCAGTGCCGGCGAGTAGGC........................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................ACT-------------GG----------TGCAGTGCCGGCGAGTAGG.........................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................T-------------GG----------TGCAGTGCCGGCGAG.............................................................1811.001000010000000000000000000000000000000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACT-------------GG----------TGCAGTGCCTC.................................................................3211.001000000000000000000000000000000000000000000000000000000000000001
..........................................................TCGCTCGCACT-------------GG----------TGCAGT......................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TGCAA.......................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------GG----------TTT.........................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
....................................................GCCCTCTCGCTCGCACT-------------........................................................................................1720.501000000000000000000000000000000000000000000000000000000000010000
...................................................TGCCCTCTCGCTCGCACT-------------T.......................................................................................1950.402001000000000000000000000000000010000000000000000000000000000000
..................................................TTGCCCTCTCGCTCGCACC-------------........................................................................................1940.251010000000000000000000000000000000000000000000000000000000000000
...................................................TGCCCTCTCGCTCGCACT-------------TT----------............................................................................20100.101000000000000000000000000000001000000000000000000000000000000000
droWil2
GAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droEle1
GGC--ATCCTTGGAGTGCTCTTTCAGTT---------------------CTGGCCCACTGGCTCACAGCTGCAACTGCAACTGGGAAAACCTTTTGTGGTCCAGGCCAACAGACAACACACTTGACTGATGA--------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:28 PM