ID:

dmo_1042

 Coordinate:

scaffold_6496:8448645-8448795 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.1 -27.1 -27.0

Flybase annnotation

exon [dmoj_GLEANR_5115:15]; CDS [Dmoj\GI20242-cds]; intron [Dmoj\GI20242-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_6473:4964701-4964725 -
  2. scaffold_6473:7001068-7001092 +
  3. dmo_1042  scaffold_6496:8448690-8448714 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTGTTGGGAACTCATTGAGAGGCTCCGGCAAACAGCTTGGCAGGCAGTCAGGCGGCAGGCTGGCAGTGCTAGCTGAGCAGGAGGCGGCAACAACAACCGCAGCAGCAGCAACAACAACAACAACAACAACAACGACAACATACTTGAGAGTAGTGCATAATCATTTAACATAAAACGTTTTCGTGCTTTCATTTCTGCAGGCGCTCACCTACTGCGATCTGAAGTGCATACACATGGGCGGTCTGGTGGA
**************************************************........(((((((...)))))))..(((((((((((.........)))).((....))...................................((((((((...............................)))))))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V049
head
.......................................................................................................................................................................................................................................CACATGGGCCGTATGGTG.. 18 2 2 0.50 1 1 0
...............................................................................................AACCGCAGCAGCAGCAACAACAACA................................................................................................................................... 25 0 3 0.33 1 1 0
.............................................................................GCAGGAGGGGGCAAAAACAA.......................................................................................................................................................... 20 2 4 0.25 1 0 1
..................................................................................................CGCAGCAGCAGCAACAACA...................................................................................................................................... 19 0 20 0.05 1 0 1
.................................................................................................................AACAACAACAACAACAACAACGA................................................................................................................... 23 0 20 0.05 1 1 0
.....................................................................................................AGCAGCAGCAACAACAACAACA................................................................................................................................ 22 0 20 0.05 1 0 1

Anti-sense strand reads

CGACAACCCTTGAGTAACTCTCCGAGGCCGTTTGTCGAACCGTCCGTCAGTCCGCCGTCCGACCGTCACGATCGACTCGTCCTCCGCCGTTGTTGTTGGCGTCGTCGTCGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTATGAACTCTCATCACGTATTAGTAAATTGTATTTTGCAAAAGCACGAAAGTAAAGACGTCCGCGAGTGGATGACGCTAGACTTCACGTATGTGTACCCGCCAGACCACCT
**************************************************........(((((((...)))))))..(((((((((((.........)))).((....))...................................((((((((...............................)))))))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M046
female body
..............................TTTGCCGAACCGTCCGTCGGT........................................................................................................................................................................................................ 21 2 1 1.00 1 1 0
..........................................................................................................GTCGTTGTTGTTGTTGTTG.............................................................................................................................. 19 0 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6496:8448595-8448845 + dmo_1042 GCTG--TTG-----GGAAC--TCATTGAGAGGCT----------CCGGCAAACAGC--------------------TTGGC-----------------AGGCAGTCAGGCGGCAGGCTGGC----------AGTGCTAGC------------------------------------T----------------------------GAGCA--------------GG----------------------------------------------AGGCGGCAACAACAACCGCAGCAGCAGCAACAAC------AACAA---CAAC------AACAACAACGACAACA--------------------TACTTGAGAGTAGTGCATAATCATTTAACATAAAACGTTTTCGTGCTTT----CATTTCTG------------------------CAG--GCGCTC--ACCTACTGCGATCTGAAGTGCATA--CACATGGGCGG------------------------TCTGG------------------TGGA
droVir3 scaffold_12875:15353525-15353689 - GCTG--TTG-----GGAAC--TCATTGAAAGGCC----------CCT------------------------GC-------------------------AGGCAGGC---------------------------------------AG------------------GCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-------GGCAAC---A---GACTTGAGAGTAGTGCATAATCATTTAACATAAAACGTTTTCGTGTTTT----CGTTTTTG------------------------TAG--GCGCTC--ACCTACTGCGATCTGAAGTGCATA--CACATGGGTGG------------------------TCTGG------------------TGGA
droGri2 scaffold_15245:12155428-12155624 - GCTG--TTGT--CGGTGGC--TCATGGA-------------------------------GTGCCCGGCTCAGC-------------------------AGGCAGGCAT-------------------------------------------------------TCAGGC------------------------------------------------------------------------------AG----------------------------------------------------------------------------------------------GCA-------GTCAGC---G---TACTTGAGTGGAGTGCATAATCAATTAACATAAAATGTTCTCATGTTTT----TTTTTTTTTTTGGTTTTTCTTGTCAT-TTTTGTAG--GCGCTC--ACCTACTGCGATTTAAAGTGCATA--CACATGGGCGG------------------------TCTGG------------------TGGA
droWil2 scf2_1100000004511:1413472-1413626 + GAGC--T---------------CT---GTG----------AGCTCCA------------------------GCAGCGGTTC--------GCATC------------------------TTGGTCAATTGGCAGCGGCCGTTCAGCAGCA-------TCAT---CAGCAAC---A---------------------------------------------------------------------GCAG-------------------------CAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGC---------AG---------------CAACAACAGCAGCA-------ACAACAACT-CAGTGC---CGA--------------------ACAGG-----------------------------------------------------------------------------------------------------------------------------------------------------GCA
dp5 XR_group6:5608873-5609093 - GCAG--ACA--------G---------------------------A------CAGA--------------------------------CAGGCAGAC-AG---ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------GACACATT--TGCTTGCCACTTCCGAAGGATGTTGCTCCT--TGGAGCAGCAGCAGCAACACC------AACAG---CAAC------AGCAACAACAGCAAAG-----------------------------------------TATTTGCCAGGACAAGTATTTAAGTTCC------------TCTTCTGCTGCTGTTCTG-TGCTGTGGCTGCTTCC--CCCTCCTTCCTTTTGAAATGCATA--AAAATGGG------------------------------------------------------
droPer2 scaffold_5:513622-513772 - AGCG--GCG--------G---------------------------CGGCA-------------------------------------------------------------------------------------------------------------G---CAGCAG---CAGCAGCA-------------------GTT------CAGGCCCAGCAACGTCAGGCATTGCGTGTTGCACAGCAA-------------------------CAACAGCAACAACAACAGCAGCAGCAACAACAGC------AACAG---CAA---------CAACAACGGCAACA-------GAC------------------------ACATCACCATGCAACAGCAA-----------------------------------------------------------------------------------AC-------------------------------------------------------------------
droAna3 scaffold_13337:20142424-20142566 - GTTG--GCA--------GC--TCAAATAAGGGC--------------------------------------------------------ATGTCTGGCCAGTGGCC-------------------------ATCGGCAGCGAAACGGCG-------ACAA---CAGCAAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCAGCAACA------GCAGCAGCAGCAGCAACTGCAACTG---CAAC------GGCAACAACCAGGACA-------------------------------------------------------TGCTTG-------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396589:2063640-2063777 - GAAG--C--------------CCATTGAGAAGCA--GA--G------------------GAACCAGAAGCAGCAGGC---TG-----CCGCGC--------------------------------------A-----------ACAGCA-------ACAAATTCAGCAGC---A---------------------------------------------------------------------GCAACAGATA-------------------CAGCAACAACAACAACAGCAGCAGCAGCAACTGC------AACAG---CAGC------AACAACAACTGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302619:325976-326112 - GCTG--GGA-------AATCCTCC---ATA----------TATACCGGCA---------GCATC-------------------------AGATTCGGCCAACAACTATGCGGGATCTCAG-------------------------------CAGCAGC----------------------------------------------TCCTC---------------------------------GG----------------------------CAATAGCAACAACAATGGCAGCGGCAATAACAAC------AATAA---TAAC------AACAACAACAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454077:1863971-1864140 + CAGA--CA----------------------------------------------------------------------------------CGC--------------------------------------ATCGCCAGC----------------------------------------------------------------------------------------------------ACAGCAG-------------------------CAACAGCAACAACAGCAGCAGCAACAGCAACAGC------AGCAA---CACG------AACAGCAGCAACAGCTTTCCTTT--T--A----------GCTCGTGCAATTTACAACTATTTACTTTTACACATTTGTTTATTTG----TTTATTTA------------------------TGG--GCTTTT--TGTTATTGCTATTT--------------------------------------------------------------------------
droEle1 scf7180000491249:4493650-4493835 - GTCAAGTTG-----CCGAC--TAACC--------------------------------------------------------------------------------------------AG----------CAACTGCCAACTGGCAGCA-------ACAA---CAACAAC---A---------------------------------------------------------------------GCAA-------------------------CAGCAGCAACAACAACAACAACAACAGTAACAAC---------AA---------------CATCAACCGCAGCC-------GACAAC--------------------------AGCAATTGCTATAAAACATTCAAATGGGCCGCCGACTTCTTT------------------------CAG--ACCCTCGAAAATACCGCGATCCGAGGCAC-------------------------------------------------------------------
droRho1 scf7180000758191:285-436 - AGGC--TGC--------------------------AA-GCAGA---------C-------------------------------------------------------------------------------------------------------ACAA---CAACAGC---A---------------------------------------------------------------------GAAA-------------------------CAACTACAACAACAACGGCAGCAGCAACAACTAC------AACAA---CAAC------GGCAGCAGCAACAACA-------ATT-------TA--------------------------------------------AAAATT------------GTTTATGCGTCTGCGCAGCCGCAAAAGTCGCCTTC--GCCTTTTGCCTTCTG-----C-------------------------------------------------------------------
droBia1 scf7180000302297:352850-352963 + GCCC--CAG-----CA----------------------------------ATCATCTCAACAGC-------------------------AG---------------ATCCAGCAGCCT-----------------------------C-AGCAT---------CAACCC------------------------------------------------------------------------------CAGCAT-------------------CAACCGCAACAGCAACCGCAACAGCAACAACAAC------AACAG---CAAC------AACAGCAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415345:374447-374591 - GTTT--TTGAGCCGGAAAT--CTATT---------------------------------CGCTTAGCGACAACAGCTTGTC--------ACGT-------TTAATGATGCGGCAGCCTAG-------------------------------CAGCAGT------------------G----------------------------GAGGA--------------GGA---------------GC----------------------------CACCACCTCCACCAGCAACAACAACAACAATAAC------AACAC---CAAC------AACAACACCAACAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409182:208998-209155 - TCAT--CAA-------------------TT----------AGATCCA------------------------GCAAAC---TGCACAGGCATGCTTGGATA-T---------------------------------------------A-AATAT---------TGGCTAC---A---------------------------------------------------------------------GGAA-------------------------CAAACGCAACAACAAGGACGACAACAACAACAAC------AACAGCAGCAGC------AACAACAACAACAACT-----------------TA----TGGAGAGGTGTGTGTATGCTTTCGTCACAAG-----------------------------------------------------------------------------------AC-------------------------------------------------------------------
dm3 chr3L:14020847-14020996 - GAAG--C--------------CCATTGAAAAGCA--GC--G------------------AACACAAAAGCAGCAGGC---TA--------CGC--------------------------------------AG-----------CAGCA-------ACAAATTCAGCAG---CAGCAGCA-------------------ATTGCAGCAC--------CAACACCAG----------------------------------------------ATGCAGCAACAACAGCAGCAGCAGCAGCAGCAGC------AACAA---CAAC------AACAACAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:2052779-2052909 - TTGT--G---------AAC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GCAA---CAGCAGCAGCAGCAACAGGCTGCTGCAGTGGCCGCAGTAGCTGCTCA---------------------------------G----------------------------GCACAGCAACACCAGTT---GCAGCAGCAGCAGC------AACAG---CAAC------AACAACAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_15:1216134-1216358 - GCAA--CGG-----GC-----TGC-----------------------------------------------------------------------------------------------------------AG-----------CAGCG-------GCAGCTGTAGTTG---CAGCAGCA-------------------GTTAGTGCGC--------T--------------------GCACAACGG-------------------------CAACAAGCAGCAGCACTA---CAACAACAATAAT------AACAA------CAACACTAACGGTAACACCAAGT-----------------C------------------------------------ACGTGATCGCGCCGA---------------------------------------------TC--ATCATCTGCAGTCGCAGCAGCAGGAGCACGACGATGATGAGGATGACGACGAGGAGGATGGCGAGGAGGAAGAGGATGAGGATGACGA
droYak3 2L:18645181-18645325 + GCTT--CTT-----GCCAT--TCACCGCGAAACGCAG-GCACA---------C-----------AAAAG-AAC---GTGCA-----------------AAACAGCTGGGACTCGGACTGAGAGT-------------AAC------------------------------------G----------------------------GAACG--------------TC----------------------------------------------GAGCAACAAGTGCAGCAGCAGCAGTAGCAGTAGC------AACAA---CAAC------AACAACATCAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droEre2 scaffold_4690:7498809-7498982 + TCGT--TGT-----GAAGC--TCGATGC------------------------------------------AGCAG-------CGCGGCCACGCCCCCGCG---ACTGTCCGTT---------------------GGTCAGCCAGCAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGC------AACAG---CAAC------AGCAGCAGCAACGGCA-------GACAAAATT-TCGCGCTTCAAAGTATCGCAAATGCAGTTA------------------------------------------------------------------------------------------AC-------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCTG--TTG-----GGAAC--TCATTGAGAGGCT----------CCGGCAAACAGC--------------------TTGGC-----------------AGGCAGTCAGGCGGCAGGCTGGC----------AGTGCTAGC------------------------------------T----------------------------GAGCA--------------GG----------------------------------------------AGGCGGCAACAACAACCGCAGCAGCAGCAACAAC------AACAA---CAAC------AACAACAACGACAACA--------------------TACTTGAGAGTAGTGCATAATCATTTAACATAAAACGTTTTCGTGCTTT----CATTTCTG------------------------CAG--GCGCTC--ACCTACTGCGATCTGAAGTGCATA--CACATGGGCGG------------------------TCTGG------------------TGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................AACCGCAGCAGCAGCAACAAC------AACA............................................................................................................................................................................................................................................2530.331100000
................................................................................................................................................................................................................................................................................................CGCAGCAGCAGCAACAAC------A...............................................................................................................................................................................................................................................19200.051001000
...............................................................................................................................................................................................................................................................................................................AAC------AACAA---CAAC------AACAACAACGA...................................................................................................................................................................................................................23200.051100000
...................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAAC------AACAA---CA......................................................................................................................................................................................................................................22200.051001000
droVir3
GCTG--TTG-----GGAAC--TCATTGAAAGGCC----------CCT------------------------GC-------------------------AGGCAGGC---------------------------------------AG------------------GCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-------GGCAAC---A---GACTTGAGAGTAGTGCATAATCATTTAACATAAAACGTTTTCGTGTTTT----CGTTTTTG------------------------TAG--GCGCTC--ACCTACTGCGATCTGAAGTGCATA--CACATGGGTGG------------------------TCTGG------------------TGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
GCTG--TTGT--CGGTGGC--TCATGGA-------------------------------GTGCCCGGCTCAGC-------------------------AGGCAGGCAT-------------------------------------------------------TCAGGC------------------------------------------------------------------------------AG----------------------------------------------------------------------------------------------GCA-------GTCAGC---G---TACTTGAGTGGAGTGCATAATCAATTAACATAAAATGTTCTCATGTTTT----TTTTTTTTTTTGGTTTTTCTTGTCAT-TTTTGTAG--GCGCTC--ACCTACTGCGATTTAAAGTGCATA--CACATGGGCGG------------------------TCTGG------------------TGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GAGC--T---------------CT---GTG----------AGCTCCA------------------------GCAGCGGTTC--------GCATC------------------------TTGGTCAATTGGCAGCGGCCGTTCAGCAGCA-------TCAT---CAGCAAC---A---------------------------------------------------------------------GCAG-------------------------CAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGC---------AG---------------CAACAACAGCAGCA-------ACAACAACT-CAGTGC---CGA--------------------ACAGG-----------------------------------------------------------------------------------------------------------------------------------------------------GCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................A-------TCAT---CAGCAAC---A---------------------------------------------------------------------GCAG-------------------------CAGCA...................................................................................................................................................................................................................................................................................22200.10200020
................................................................................................................................................................................................................................................................................................................GC---------AG---------------CAACAACAGCAGCA-------AC.....................................................................................................................................................................................................20200.05100010
...................................................................................................................................................................CAGCAAC---A---------------------------------------------------------------------GCAG-------------------------CAGCAGCAGCAG............................................................................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................................................................GCAG-------------------------CAGCAGCAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................................................AT---CAGCAAC---A---------------------------------------------------------------------GCAG-------------------------CAGCAG..................................................................................................................................................................................................................................................................................20200.05101000
............................................................................................................................................................................................................................................................................................................AACAGC---------AG---------------CAACAACAGCAGCA-------.......................................................................................................................................................................................................22200.05100010
.......................................................................................................................................................................AAC---A---------------------------------------------------------------------GCAG-------------------------CAGCAGCAGCA.............................................................................................................................................................................................................................................................................19200.05101000
......................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAG................................................................................................................................................................................................................................................................18200.05100010
............................................................................................................................................................................................................................................................................................................AACAGC---------AG---------------CAACAACAGCA.................................................................................................................................................................................................................19200.05100010
dp5
GCAG--ACA--------G---------------------------A------CAGA--------------------------------CAGGCAGAC-AG---ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------GACACATT--TGCTTGCCACTTCCGAAGGATGTTGCTCCT--TGGAGCAGCAGCAGCAACACC------AACAG---CAAC------AGCAACAACAGCAAAG-----------------------------------------TATTTGCCAGGACAAGTATTTAAGTTCC------------TCTTCTGCTGCTGTTCTG-TGCTGTGGCTGCTTCC--CCCTCCTTCCTTTTGAAATGCATA--AAAATGGG------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................AC-AG---ACAGACAGAC---------------------GGACAGA----------------------------...............................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000200
...................................................................................................G---ACAGACAGAC---------------------GGACAGA----------------------------...............................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000002
................................................................................................C-AG---ACAGACAGAC---------------------GGACAGA----------------------------...............................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
...................................................................................................G---ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------GA...................................................................................................................................................................................................................................................................................................................22200.0510100000000
...........................................................................................................................................................................................................................................................................................................................AG---CAAC------AGCAACAACAGCA.................................................................................................................................................................................................................19200.0510000100000
................................................................................................C-AG---ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................22200.0510000000100
..................................................................................................AG---ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................21200.0510000000100
..............................................................................................GAC-AG---ACAGACAGAC---------------------GGACAGA----------------------------C---...........................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.......................................................................................................ACAGACAGAC---------------------GGACAGA----------------------------C---A---------------------------------------------------------------------G....................................................................................................................................................................................................................................................................................................................20200.0510000000100
.............................................................................................AGAC-AG---ACAGACAGAC---------------------GGA...............................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
AGCG--GCG--------G---------------------------CGGCA-------------------------------------------------------------------------------------------------------------G---CAGCAG---CAGCAGCA-------------------GTT------CAGGCCCAGCAACGTCAGGCATTGCGTGTTGCACAGCAA-------------------------CAACAGCAACAACAACAGCAGCAGCAACAACAGC------AACAG---CAA---------CAACAACGGCAACA-------GAC------------------------ACATCACCATGCAACAGCAA-----------------------------------------------------------------------------------AC-------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAGCAACAA..........................................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGCAGCA..............................................................................................................................................................................................................................................................22200.051001000
droAna3
GTTG--GCA--------GC--TCAAATAAGGGC--------------------------------------------------------ATGTCTGGCCAGTGGCC-------------------------ATCGGCAGCGAAACGGCG-------ACAA---CAGCAAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCAGCAACA------GCAGCAGCAGCAGCAACTGCAACTG---CAAC------GGCAACAACCAGGACA-------------------------------------------------------TGCTTG-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................GCAAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGC.................................................................................................................................................................................................................................................................................23200.204040000
........................................................................................................................................................................AC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCA................................................................................................................................................................................................................................................................................21200.204000004
...................................................................................................................................................CG-------ACAA---CAGCAAC---A---------------------------------------------------------------------GCAACAGC.............................................................................................................................................................................................................................................................................................................2250.201010000
.............................................................................................................................................................................A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCAGCAACA------GC..................................................................................................................................................................................................................................................................27140.071100000
.............................................................................................................................................................................................................................................................................................A------GCAGCAGCAGCAGCAACTGC................................................................................................................................................................................................................................................21170.061010000
..............................................................................................................................................................AA---CAGCAAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGC.................................................................................................................................................................................................................................................................................27200.051010000
....................................................................................................................................................................................................................................................................................AGCAGCAACA------GCAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................25200.051000001
......................................................................................................................................................................CAAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCA...................................................................................................................................................................................................................................................................................20200.051100000
..........................................................................................................................................................................................................................................................................................AACA------GCAGCAGCAGCAGCAA....................................................................................................................................................................................................................................................20200.051010000
.....................................................................................................................................................................................................................................................AACAGCAG-------------------CAGCAGCAGCAA............................................................................................................................................................................................................................................................................20200.051010000
.......................................................................................................................................................................AAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCAGC..............................................................................................................................................................................................................................................................................24200.051100000
.....................................................................................................................................................................................................................................................................................GCAGCAACA------GCAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................24200.051010000
..........................................................................................................................................................................................................................................................CAG-------------------CAGCAGCAGCAACA------GCAGCA..............................................................................................................................................................................................................................................................23200.051000001
.......................................................................................................................................................................AAC---A---------------------------------------------------------------------GCAACAGCAG-------------------CAGCAGCAGCAAC...........................................................................................................................................................................................................................................................................27200.051000001
droBip1
GAAG--C--------------CCATTGAGAAGCA--GA--G------------------GAACCAGAAGCAGCAGGC---TG-----CCGCGC--------------------------------------A-----------ACAGCA-------ACAAATTCAGCAGC---A---------------------------------------------------------------------GCAACAGATA-------------------CAGCAACAACAACAACAGCAGCAGCAGCAACTGC------AACAG---CAGC------AACAACAACTGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCTG--GGA-------AATCCTCC---ATA----------TATACCGGCA---------GCATC-------------------------AGATTCGGCCAACAACTATGCGGGATCTCAG-------------------------------CAGCAGC----------------------------------------------TCCTC---------------------------------GG----------------------------CAATAGCAACAACAATGGCAGCGGCAATAACAAC------AATAA---TAAC------AACAACAACAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAGA--CA----------------------------------------------------------------------------------CGC--------------------------------------ATCGCCAGC----------------------------------------------------------------------------------------------------ACAGCAG-------------------------CAACAGCAACAACAGCAGCAGCAACAGCAACAGC------AGCAA---CACG------AACAGCAGCAACAGCTTTCCTTT--T--A----------GCTCGTGCAATTTACAACTATTTACTTTTACACATTTGTTTATTTG----TTTATTTA------------------------TGG--GCTTTT--TGTTATTGCTATTT--------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTCAAGTTG-----CCGAC--TAACC--------------------------------------------------------------------------------------------AG----------CAACTGCCAACTGGCAGCA-------ACAA---CAACAAC---A---------------------------------------------------------------------GCAA-------------------------CAGCAGCAACAACAACAACAACAACAGTAACAAC---------AA---------------CATCAACCGCAGCC-------GACAAC--------------------------AGCAATTGCTATAAAACATTCAAATGGGCCGCCGACTTCTTT------------------------CAG--ACCCTCGAAAATACCGCGATCCGAGGCAC-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGGC--TGC--------------------------AA-GCAGA---------C-------------------------------------------------------------------------------------------------------ACAA---CAACAGC---A---------------------------------------------------------------------GAAA-------------------------CAACTACAACAACAACGGCAGCAGCAACAACTAC------AACAA---CAAC------GGCAGCAGCAACAACA-------ATT-------TA--------------------------------------------AAAATT------------GTTTATGCGTCTGCGCAGCCGCAAAAGTCGCCTTC--GCCTTTTGCCTTCTG-----C-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCCC--CAG-----CA----------------------------------ATCATCTCAACAGC-------------------------AG---------------ATCCAGCAGCCT-----------------------------C-AGCAT---------CAACCC------------------------------------------------------------------------------CAGCAT-------------------CAACCGCAACAGCAACCGCAACAGCAACAACAAC------AACAG---CAAC------AACAGCAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTTT--TTGAGCCGGAAAT--CTATT---------------------------------CGCTTAGCGACAACAGCTTGTC--------ACGT-------TTAATGATGCGGCAGCCTAG-------------------------------CAGCAGT------------------G----------------------------GAGGA--------------GGA---------------GC----------------------------CACCACCTCCACCAGCAACAACAACAACAATAAC------AACAC---CAAC------AACAACACCAACAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCAT--CAA-------------------TT----------AGATCCA------------------------GCAAAC---TGCACAGGCATGCTTGGATA-T---------------------------------------------A-AATAT---------TGGCTAC---A---------------------------------------------------------------------GGAA-------------------------CAAACGCAACAACAAGGACGACAACAACAACAAC------AACAGCAGCAGC------AACAACAACAACAACT-----------------TA----TGGAGAGGTGTGTGTATGCTTTCGTCACAAG-----------------------------------------------------------------------------------AC-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GAAG--C--------------CCATTGAAAAGCA--GC--G------------------AACACAAAAGCAGCAGGC---TA--------CGC--------------------------------------AG-----------CAGCA-------ACAAATTCAGCAG---CAGCAGCA-------------------ATTGCAGCAC--------CAACACCAG----------------------------------------------ATGCAGCAACAACAGCAGCAGCAGCAGCAGCAGC------AACAA---CAAC------AACAACAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................AG----------------------------------------------ATGCAGCAACAACAGCAGCAG...................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCATTGAAAAGCA--GC--G------------------AAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CAG----------------------------------------------ATGCAGCAACAACAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-------ACAAATTCAGCAG---CAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AACACCAG----------------------------------------------ATGCAGCAACAACAGCAGCA....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................C--------CAACACCAG----------------------------------------------ATGCAGCAACA.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGCAGCAC--------CAACACCAG----------------------------------------------A.......................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CCAG----------------------------------------------ATGCAGCAACAACAGCAGCAG...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CACCAG----------------------------------------------ATGCAGCAACAACAGCAGC.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTGAAAAGCA--GC--G------------------AACACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
GAAG--C--------------CCATTGAAAAGCA--GC--G------------------AACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..AG--C--------------CCATTGAAAAGCA--GC--G------------------AAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................A--GC--G------------------AACACAAAAGCAGCAGGC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATTGCAGCAC--------CAACACCAG----------------------------------------------ATGCA...................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAAAGCA--GC--G------------------AACACAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................CAC--------CAACACCAG----------------------------------------------ATGCAGCAC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................C--------------------------------------AG-----------CAGCA-------ACAAATTCAGCAG---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AA---CAAC------AACAACAACAACAAC...............................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAAATTCAGCAG---CAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AACAA---CAAC------AACAACAACAAC..................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCAGCA........................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGC...............................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAGCAGCAGC------AACAA---CAAC------AACA..........................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000010000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCAGCAGCAGCAGC------A...............................................................................................................................................................................................................................................3370.1410000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCAGCAGC............................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAGCAGCA........................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGC------AACA............................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................C------AACAA---CAAC------AACAACAACAACAAC...............................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAGCAGC------AACAA---CAAC------AACAACAACA....................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GCAGCAGC------AACAA---CAAC------AACAACAACAA...................................................................................................................................................................................................................28100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCAG................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAGCAGC------AACAA---CAAC------AACAAC........................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAGCAGCAGC------AACAA---CAAC------AACAACA.......................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCAGCAGCAGCA........................................................................................................................................................................................................................................................30140.0710000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGCAGCAGC.........................................................................................................................................................................................................................................................27180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CAGC------AACAA---CAAC------AACAACAACAACAA................................................................................................................................................................................................................27190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCAGC.........................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGC------AACAA---CAAC------..............................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGC------AACA............................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGC............................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGCAGCAGCAG.......................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAG................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCAGCAG.............................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGC..................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCAGCAG.......................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGC------AACA............................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A---CAAC------AACAACAACAACA.................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A---CAAC------AACAACAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAGCAGCAGC------AACAA---CAAC------AAC...........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GCAGCAGC------AACAA---CAAC------AACAA.........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCA.................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGCAG.............................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCAGCAGC------AACAA---CAAC------AACA..........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCAGCAGC------A...............................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAA---CAAC------AACAACAACAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GCAGCAGC------AACAA---CAAC------AACAACAA......................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAGCAGCAGC------A...............................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAGCAGCAGC------AACAA---CAAC------A.............................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGC------AA..............................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAA---CAAC------AACAACAACAACA.................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AA---CAAC------AACAACAACAACAA................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGC------AACAA---CAA.....................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC------A...............................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAGCAGCAGC------AACAA---CAAC------AACAA.........................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGC------AACAA---CAAC------AACAACAACAAC..................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTGT--G---------AAC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GCAA---CAGCAGCAGCAGCAACAGGCTGCTGCAGTGGCCGCAGTAGCTGCTCA---------------------------------G----------------------------GCACAGCAACACCAGTT---GCAGCAGCAGCAGC------AACAG---CAAC------AACAACAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
TTGT--G---------AAC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GC..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..................C--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GCAA---CAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.................AC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
...............................................................................................................................................................................CAACAGGCTGCTGCAGTGGCCGCAGT...............................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.TGT--G---------AAC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GCAA---C....................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
......................................................................................................................................................................................................AGTAGCTGCTCA---------------------------------G----------------------------GCACAG..................................................................................................................................................................................................................................................................................1911.00100010000000000000
.TGT--G---------AAC--TCATG-----GTC----------CCA------------------------GC------------------------------------------------------------------------AGCA-------GC..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..............................................A------------------------GC------------------------------------------------------------------------AGCA-------GCAA---CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................18200.05100100000000000000
........................................................................................................................................................................................................................................................................................................CAGCAGCAGC------AACAG---CAAC------AAC...........................................................................................................................................................................................................................22200.05100000000000100000
droSec2
GCAA--CGG-----GC-----TGC-----------------------------------------------------------------------------------------------------------AG-----------CAGCG-------GCAGCTGTAGTTG---CAGCAGCA-------------------GTTAGTGCGC--------T--------------------GCACAACGG-------------------------CAACAAGCAGCAGCACTA---CAACAACAATAAT------AACAA------CAACACTAACGGTAACACCAAGT-----------------C------------------------------------ACGTGATCGCGCCGA---------------------------------------------TC--ATCATCTGCAGTCGCAGCAGCAGGAGCACGACGATGATGAGGATGACGACGAGGAGGATGGCGAGGAGGAAGAGGATGAGGATGACGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GCTT--CTT-----GCCAT--TCACCGCGAAACGCAG-GCACA---------C-----------AAAAG-AAC---GTGCA-----------------AAACAGCTGGGACTCGGACTGAGAGT-------------AAC------------------------------------G----------------------------GAACG--------------TC----------------------------------------------GAGCAACAAGTGCAGCAGCAGCAGTAGCAGTAGC------AACAA---CAAC------AACAACATCAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................AGT-------------AAC------------------------------------G----------------------------GAACG--------------TC----------------------------------------------GAGCAACAAGTGCAGC........................................................................................................................................................................................................................................................................3014.00400000000004
.......................................................................................................GCTGGGACTCGGACTGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
................................................................................A-----------------AAACAGCTGGGACTCGGACTGAGAGT-------------...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
................................................................................A-----------------AAACAGCTGGGACTCGGACTGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
................................................................................................................................................................................G----------------------------GAACG--------------TC----------------------------------------------GAGCAACAAGTG............................................................................................................................................................................................................................................................................2011.00101000000000
......................................................................................................................................................................................................................................................................................................AGTAGCAGTAGC------AACAA---CAAC------AACAAC........................................................................................................................................................................................................................2711.00101000000000
....................................................................................................................CTGAGAGT-------------AAC------------------------------------G----------------------------GAACG--------------TC----------------------------------------------GAGCAACA................................................................................................................................................................................................................................................................................2711.00100000010000
......................................................................................................AGCTGGGACTCGGACTGAGAGT-------------...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000
...................................................................................................AACAGCTGGGACTCGGACTGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................ACTCGGACTGAGAGT-------------AAC------------------------------------G----------------------------GAAC.......................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...................................................................................................................................................................................................................................................................................................AGCAGTAGCAGTAGC------AACAA---CAAC------AACA..........................................................................................................................................................................................................................2811.00101000000000
....................................................................................................................................................................................................................................................................................................GCAGTAGCAGTAGC------AACAA---CAAC------AACA..........................................................................................................................................................................................................................2711.00101000000000
....................................................................................................................CTGAGAGT-------------AAC------------------------------------G----------------------------GAACG--------------TC----------------------------------------------GAGC....................................................................................................................................................................................................................................................................................2311.00100000010000
...........................................................................................................GGACTCGGACTGAGAGT-------------AAC------------------------------------G----------------------------GAAC.......................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
droEre2
TCGT--TGT-----GAAGC--TCGATGC------------------------------------------AGCAG-------CGCGGCCACGCCCCCGCG---ACTGTCCGTT---------------------GGTCAGCCAGCAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGC------AACAG---CAAC------AGCAGCAGCAACGGCA-------GACAAAATT-TCGCGCTTCAAAGTATCGCAAATGCAGTTA------------------------------------------------------------------------------------------AC-------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................AAC------AGCAGCAGCAACGGC...............................................................................................................................................................................................................1860.3320000020
.................................................................................................................................................................................................................................................................................................................................AAC------AGCAGCAGCAACGGCA-------.......................................................................................................................................................................................................1930.3310001000
...............................................................................................................................................GCAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGC.................................................................................................................................................................................................................................................................................20200.1022000000
............................................................................................................................................................................................................................................................................................................AACAGC------AACAG---CAAC------AGCAGCAGCA....................................................................................................................................................................................................................25190.0511000000
.............................................................................................................................................................................A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................25200.0511000000
...............................................................................................................................................GCAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGC..............................................................................................................................................................................................................................................................................23200.0510100000
...........................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................18200.0511000000
...............................................................................................................................................GCAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAG..................................................................................................................................................................................................................................................................................19200.0511000000
.................................................................................................................................................................................................................................................................................................................C------AACAG---CAAC------AGCAGCAGC.....................................................................................................................................................................................................................19200.0511000000
...................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGC------AACA............................................................................................................................................................................................................................................19200.0511000000
.............................................................................................................................................................................................................................................................................................................ACAGC------AACAG---CAAC------AGCAGCAGC.....................................................................................................................................................................................................................23200.0510100000
....................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGC------AACAG---C.......................................................................................................................................................................................................................................20200.0510100000
.......................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAGCAGC............................................................................................................................................................................................................................................................21200.0510001000
..................................................................................................................................................GCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGCA.............................................................................................................................................................................................................................................................................21200.0510000100
............................................................................................................................................................GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................21200.0510000010
................................................................................................................................................CAGCA-------GC---------------A---------------------------------------------------------------------TCAG-------------------------CAGCAGCAGC..............................................................................................................................................................................................................................................................................22200.0510000010

Generated: 05/17/2015 at 11:36 PM