ID:

dmo-mir-9c

 Coordinate:

scaffold_6500:7201345-7201433 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -26.0 -25.8

Flybase annnotation

intron [Dmoj\GI17268-in]; pre_miRNA [Dmoj\mir-9c-RM]; utr5 [utr5_plus_2208]; miRNA [Dmoj\miR-9c-RA]

No Repeatable elements found

Sense Strand Reads

CTCACTGTTCTATATGTTTTTTGTCTCACCCACACAATTGCCACTCTTTCATTTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTTTCACATATTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGACACCGCCCAACCGCTCGCACAATCCGCCAACATCAGTAAAACA

***********************************************...((((..((((...(((((((((...((((.(((((.((.............)).))))).))))...)))))))))...))))..))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V041

embryo

 V110

male body		 V056

head

 V049

head
..............................................................TCTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 0 1 56810.00 56810 26268 21972 4196 2198 1220 956
..............................................................TCTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 0 1 42360.00 42360 22257 5520 5226 4993 2463 1901
..............................................................TCTTTGGTATTCTAGCTGTAGAAA....................................................................................................... 24 2 1 3001.00 3001 2172 397 314 85 19 14
..............................................................TCTTTGGTATTCTAGCTGTAGAA........................................................................................................ 23 1 1 2943.00 2943 960 1895 67 11 5 5
..............................................................TCTTTGGTATTCTAGCTGTAGAT........................................................................................................ 23 0 1 2336.00 2336 1431 765 51 59 21 9
...............................................................CTTTGGTATTCTAGCTGTAGA......................................................................................................... 21 0 1 2322.00 2322 2219 98 1 3 1 0
...............................................................CTTTGGTATTCTAGCTGTAG.......................................................................................................... 20 0 1 1791.00 1791 1765 14 6 3 2 1
...........................................................................................................TAAAGCTTTTATACCAAAGCT............................................................. 21 0 1 1767.00 1767 322 1426 14 0 4 1
..............................................................TGTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 1186.00 1186 1 1183 1 0 1 0
...........................................................................................................TAAAGCTTTTATACCAAAGCTC............................................................ 22 0 1 1015.00 1015 109 904 2 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGAAAA...................................................................................................... 25 3 1 756.00 756 685 33 20 14 2 2
..............................................................TCTTTGGTATTCTAGCTGTA........................................................................................................... 20 0 1 630.00 630 304 177 19 76 37 17
..............................................................TCCTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 594.00 594 10 567 7 3 5 2
...........................................................................................................TAAAGCTTTTATACCAAAGCC............................................................. 21 1 1 407.00 407 0 407 0 0 0 0
................................................................TTTGGTATTCTAGCTGTAGA......................................................................................................... 20 0 1 320.00 320 159 117 31 7 4 2
..............................................................TGTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 314.00 314 0 313 0 1 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGATA....................................................................................................... 24 1 1 266.00 266 131 105 25 4 1 0
..............................................................TCTGTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 257.00 257 1 253 2 0 1 0
...............................................................CTTTGGTATTCTAGCTGTAGAAA....................................................................................................... 23 2 1 242.00 242 241 1 0 0 0 0
..............................................................TCTCTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 226.00 226 1 221 4 0 0 0
................................................................TTTGGTATTCTAGCTGTAGATT....................................................................................................... 22 0 1 220.00 220 32 107 55 21 3 2
..............................................................TTTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 219.00 219 3 216 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGATT....................................................................................................... 24 0 1 180.00 180 54 75 26 12 8 5
..............................................................TCTTTGGTATTCTAGCTGTAA.......................................................................................................... 21 1 1 169.00 169 115 21 12 9 6 6
..............................................................TCTTTTGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 154.00 154 12 136 1 4 1 0
...........................................................................................................TAAAGCTTTTATACCAAAGC.............................................................. 20 0 1 150.00 150 7 143 0 0 0 0
................................................................TTTGGTATTCTAGCTGTAG.......................................................................................................... 19 0 1 146.00 146 106 8 15 10 5 2
..............................................................TCTTTGGTATTGTAGCTGTAGA......................................................................................................... 22 1 1 146.00 146 141 3 0 0 1 1
..............................................................TCTTTGGTATTCTAGCTGTAGAC........................................................................................................ 23 1 1 144.00 144 30 102 3 7 0 2
..............................................................TCCTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 137.00 137 1 129 2 1 3 1
...............................................................CTTTGGTATTCTAGCTGTAGAT........................................................................................................ 22 0 1 133.00 133 128 5 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGT............................................................................................................ 19 0 1 132.00 132 78 30 4 3 12 5
..............................................................TCTTTGGTATTCTAGCTGTAGT......................................................................................................... 22 1 1 130.00 130 31 49 30 9 4 7
..............................................................TCTTTGGTATTGTAGCTGTAG.......................................................................................................... 21 1 1 129.00 129 128 0 0 0 1 0
.........................................................................................................TCTAAAGCTTTTATACCAAAGCT............................................................. 23 0 1 128.00 128 18 109 1 0 0 0
..............................................................TCTTTGGAATTCTAGCTGTAGA......................................................................................................... 22 1 1 127.00 127 14 106 2 1 3 1
..............................................................TCTTTGGTATTCTAGCTGTAT.......................................................................................................... 21 1 1 126.00 126 20 19 8 5 25 49
..............................................................TCTTTGGTATTCTAGCTGTAGC......................................................................................................... 22 1 1 121.00 121 21 55 20 5 7 13
..............................................................TCTATGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 119.00 119 0 117 0 0 2 0
.............................................................CTCTTTGGTATTCTAGCTGTAGA......................................................................................................... 23 1 1 107.00 107 17 82 6 0 1 1
..............................................................TCTTTGGTATTATAGCTGTAGA......................................................................................................... 22 1 1 107.00 107 68 33 3 1 1 1
..............................................................TCTTTGGCATTCTAGCTGTAGA......................................................................................................... 22 1 1 106.00 106 15 72 11 1 7 0
..............................................................TCTTTGGTATTCTAGCTGTAGATAAA..................................................................................................... 26 3 1 104.00 104 87 8 3 4 1 1
..............................................................TGTTTGGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 94.00 94 0 94 0 0 0 0
..............................................................TCTTTGGGATTCTAGCTGTAG.......................................................................................................... 21 1 1 89.00 89 21 13 19 4 21 11
..............................................................TCTTTGGTATTCTAGCTGTCG.......................................................................................................... 21 1 1 88.00 88 1 1 33 1 8 44
...............................................................CTTTGGTATTCTAGCTGTAGAA........................................................................................................ 22 1 1 85.00 85 78 7 0 0 0 0
..........................................................................................................CTAAAGCTTTTATACCAAAGCT............................................................. 22 0 1 84.00 84 11 72 1 0 0 0
..............................................................TCTTTGTTATTCTAGCTGTAGA......................................................................................................... 22 1 1 83.00 83 9 72 0 2 0 0
..............................................................TCTTTGGGATTCTAGCTGTAGA......................................................................................................... 22 1 1 82.00 82 12 24 17 9 7 13
..............................................................TCTTTGGTATTCTAGCTGTAGATAA...................................................................................................... 25 2 1 82.00 82 56 12 13 0 1 0
....................................................................................TTGTTTTCACATATTGTATCATC.................................................................................. 23 0 1 80.00 80 3 71 6 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTATA......................................................................................................... 22 1 1 79.00 79 3 29 7 0 11 29
................................................................TTTGGTATTCTAGCTGTAGAT........................................................................................................ 21 0 1 77.00 77 24 36 9 3 2 3
..............................................................TCTTTGGTATTCTATCTGTAG.......................................................................................................... 21 1 1 76.00 76 8 7 20 5 5 31
..............................................................TCTTTGGTATTCTAGCTGTAAA......................................................................................................... 22 1 1 72.00 72 50 13 5 2 0 2
.................................................................TTGGTATTCTAGCTGTAGA......................................................................................................... 19 0 1 70.00 70 33 30 1 5 1 0
..............................................................TCTTTGGTATTCTAGCTGTAGATC....................................................................................................... 24 1 1 70.00 70 18 13 0 32 3 4
..............................................................TCTTTGGTATTCTAGCTTTAG.......................................................................................................... 21 1 1 67.00 67 4 12 10 4 12 25
..............................................................TCTTTGGTATTCTAGCTG............................................................................................................. 18 0 1 67.00 67 2 63 0 0 1 1
..............................................................GCTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 66.00 66 5 59 1 1 0 0
..............................................................CCTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 63.00 63 6 50 3 0 3 1
...........................................................................................................TGAAGCTTTTATACCAAAGCT............................................................. 21 1 1 63.00 63 0 63 0 0 0 0
..............................................................TCTGTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 62.00 62 0 55 2 0 3 2
..............................................................TCTTTTGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 61.00 61 14 36 2 6 0 3
..............................................................TTTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 60.00 60 0 53 3 3 1 0
.........................................................................................................TCTAAAGCTTTTATACCAAAGC.............................................................. 22 0 1 59.00 59 0 59 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGG......................................................................................................... 22 1 1 58.00 58 19 15 15 2 3 4
..............................................................TCTCTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 56.00 56 4 48 2 1 1 0
..............................................................TCTTTGGTATTCTAGCTTTAGA......................................................................................................... 22 1 1 56.00 56 7 26 4 5 5 9
..............................................................TCTTTGGTATTCTATCTGTAGA......................................................................................................... 22 1 1 54.00 54 6 6 13 1 8 20
..............................................................TCTTTGGCATTCTAGCTGTAG.......................................................................................................... 21 1 1 52.00 52 14 17 9 5 6 1
..............................................................TCTTTGGTATTCTAGTTGTAGA......................................................................................................... 22 1 1 51.00 51 6 41 1 1 1 1
..............................................................TCTTTGGTATTCTAGCTGTAGAAT....................................................................................................... 24 1 1 49.00 49 16 28 5 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAC.......................................................................................................... 21 1 1 49.00 49 4 41 1 2 1 0
..............................................................TCCTTGGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 49.00 49 0 49 0 0 0 0
.............................................................CTCTTTGGTATTCTAGCTGTAG.......................................................................................................... 22 1 1 47.00 47 19 12 12 1 1 2
..............................................................TCTTTGGTATTTTAGCTGTAGA......................................................................................................... 22 1 1 46.00 46 24 16 2 1 2 1
..............................................................TCTTTGGAATTCTAGCTGTAG.......................................................................................................... 21 1 1 46.00 46 13 25 1 2 5 0
..............................................................TCTTTGGTATTATAGCTGTAG.......................................................................................................... 21 1 2 44.00 88 62 10 7 6 2 1
..............................................................CCTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 43.00 43 4 20 9 1 6 3
..............................................................TCTTTGGTATTCTCGCTGTAG.......................................................................................................... 21 1 1 42.00 42 0 0 12 3 7 20
..............................................................TCTTTGTTATTCTAGCTGTAG.......................................................................................................... 21 1 1 41.00 41 7 26 2 4 0 2
..............................................................TCTTTGGTATTCTAGATGTAG.......................................................................................................... 21 1 1 40.00 40 8 0 14 6 5 7
..............................................................TCTTTGGTATTCTAGCTGGAG.......................................................................................................... 21 1 1 39.00 39 2 1 22 0 3 11
..............................................................ACTTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 39.00 39 7 31 1 0 0 0
..............................................................TCTTCGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 38.00 38 11 17 5 1 1 3
...........................................................................................................TAATGCTTTTATACCAAAGCT............................................................. 21 1 1 37.00 37 0 37 0 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGAAAA...................................................................................................... 24 3 2 36.00 72 72 0 0 0 0 0
..............................................................TGTTTGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 36.00 36 0 36 0 0 0 0
..............................................................TATTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 35.00 35 1 1 21 2 7 3
..............................................................TCTATGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 35.00 35 2 31 1 0 1 0
..............................................................TCTTTGGTATTCTAGCTGCAG.......................................................................................................... 21 1 1 34.00 34 2 4 14 3 7 4
..............................................................TCTTTGGTATTCTAGCTGTTG.......................................................................................................... 21 1 1 34.00 34 2 11 10 3 3 5
..............................................................TCTTTCGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 34.00 34 5 28 0 0 1 0
..............................................................TCTTTGGTATTCTAGCTGTCGA......................................................................................................... 22 1 1 34.00 34 1 0 19 0 2 12
..............................................................TCTTTGGTATTCTAGCTGTTGA......................................................................................................... 22 1 1 32.00 32 2 26 2 0 2 0
..............................................................TCTTTAGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 32.00 32 2 21 5 3 1 0
.................................................................TTGGTATTCTAGCTGTAG.......................................................................................................... 18 0 1 31.00 31 18 6 3 3 0 1
............................................................................................................AAAGCTTTTATACCAAAGCT............................................................. 20 0 1 31.00 31 25 6 0 0 0 0
..............................................................TATTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 30.00 30 0 5 12 4 3 6
..............................................................TCTTTGGTATTCTAGCTGCAGA......................................................................................................... 22 1 1 30.00 30 8 10 6 0 6 0
..............................................................TCTTTGGTATTCTAGCTGTAGAG........................................................................................................ 23 1 1 29.00 29 20 2 3 0 2 2
.........................................................................................................TCTAAAGCTTTTATACCAAAGCC............................................................. 23 1 1 28.00 28 0 28 0 0 0 0
..............................................................TCTTTGGTATTCTAGTTGTAG.......................................................................................................... 21 1 1 27.00 27 1 17 3 3 2 1
..............................................................TCTTTGGTATTCTGGCTGTAGA......................................................................................................... 22 1 1 26.00 26 7 8 7 2 1 1
..................................................................TGGTATTCTAGCTGTAGA......................................................................................................... 18 0 1 26.00 26 15 11 0 0 0 0
...........................................................................................................TGAAGCTTTTATACCAAAGCTC............................................................ 22 1 1 26.00 26 0 26 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTCTAG.......................................................................................................... 21 1 1 25.00 25 2 2 8 5 5 3
..............................................................TCTTTGGTTATCTAGCTGTAGA......................................................................................................... 22 2 2 25.00 50 2 42 5 0 0 1
..............................................................TCTTTGGTATTCTAGCTGTGGA......................................................................................................... 22 1 1 25.00 25 5 11 4 1 2 2
..............................................................TCTTTGGTATTCTAGCTGGAGA......................................................................................................... 22 1 1 25.00 25 3 6 11 0 1 4
..............................................................TCTTTGGTATTCTAGCTGTGG.......................................................................................................... 21 1 1 25.00 25 8 3 5 3 5 1
..............................................................TCTTTGGTATTCTAGCTGTAGAAC....................................................................................................... 24 2 1 24.00 24 2 18 3 0 1 0
...........................................................................................................TAAAGCTTTTATACCAAAGCTT............................................................ 22 1 1 24.00 24 10 14 0 0 0 0
..............................................................TCTTTGGTGTTCTAGCTGTAG.......................................................................................................... 21 1 1 23.00 23 3 2 4 2 6 6
...........................................................................................................TAATGCTTTTATACCAAAGCTC............................................................ 22 1 1 23.00 23 0 23 0 0 0 0
..............................................................TCTTTGGTACTCTAGCTGTAG.......................................................................................................... 21 1 1 23.00 23 6 3 3 2 3 6
..............................................................TCTTTGGTACTCTAGCTGTAGA......................................................................................................... 22 1 1 23.00 23 6 9 4 1 2 1
..............................................................TCCTTGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 22.00 22 1 21 0 0 0 0
..............................................................TCGTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 22.00 22 4 0 9 0 8 1
..............................................................TCTTTGGTATTCTAGCCGTAG.......................................................................................................... 21 1 1 22.00 22 4 2 8 5 2 1
..............................................................TGTTTGGTATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 22.00 22 0 22 0 0 0 0
..............................................................TCTTTGGTATCCTAGCTGTAGA......................................................................................................... 22 1 1 22.00 22 3 7 5 2 3 2
..............................................................TCTTTGGTATTTTAGCTGTAG.......................................................................................................... 21 1 1 21.00 21 16 3 2 0 0 0
..............................................................TCTTTGGTATTCTAGATGTAGA......................................................................................................... 22 1 1 21.00 21 5 1 7 0 3 5
..............................................................TCTGTGGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 21.00 21 0 21 0 0 0 0
...............................................................TCTTGGTATTCTAGCTGTAGA......................................................................................................... 21 2 1 21.00 21 3 12 0 6 0 0
..............................................................TCTTTGGTGTTCTAGCTGTAGA......................................................................................................... 22 1 1 20.00 20 1 5 3 1 4 6
..............................................................GCTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 19.00 19 2 14 1 0 1 1
..............................................................TCTTTGGTATTCTAGCTGTAAAA........................................................................................................ 23 2 1 19.00 19 15 3 0 1 0 0
..............................................................TCTCTGGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 19.00 19 0 19 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGAAG....................................................................................................... 24 2 1 19.00 19 11 7 1 0 0 0
..............................................................TCTTTGGTATTCCAGCTGTAG.......................................................................................................... 21 1 1 18.00 18 8 2 2 2 3 1
..............................................................TCTTTGGTATTCTAACTGTAG.......................................................................................................... 21 1 1 18.00 18 4 4 3 3 1 3
................................................................TTTGGTATTCTAGCTGTAGATA....................................................................................................... 22 1 1 18.00 18 5 5 8 0 0 0
...............................................................CTTTGGTATTCTAGCTGTA........................................................................................................... 19 0 1 18.00 18 18 0 0 0 0 0
..........................................................................................................CTAAAGCTTTTATACCAAAGCTC............................................................ 23 0 1 17.00 17 2 15 0 0 0 0
............................................................................................................AAAGCTTTTATACCAAAGCTC............................................................ 21 0 1 17.00 17 12 5 0 0 0 0
..............................................................TCTTTAGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 17.00 17 2 0 8 3 0 4
..........................................................................................................CTAAAGCTTTTATACCAAAGCC............................................................. 22 1 1 17.00 17 0 17 0 0 0 0
..............................................................TCTTTGGTATTCTGGCTGTAG.......................................................................................................... 21 1 1 17.00 17 5 0 6 0 4 2
..............................................................TCTTTGGTATTCTACCTGTAGA......................................................................................................... 22 1 1 17.00 17 2 11 2 0 1 1
.............................................................CGCTTTGGTATTCTAGCTGTAGA......................................................................................................... 23 2 1 17.00 17 0 17 0 0 0 0
..............................................................TCTTTGGTATTCTAGCCGTAGA......................................................................................................... 22 1 1 17.00 17 6 6 4 1 0 0
..............................................................TCTTTGATATTCTAGCTGTAGA......................................................................................................... 22 1 1 17.00 17 5 7 2 1 1 1
..............................................................TCTTTGGTATCCTAGCTGTAG.......................................................................................................... 21 1 1 16.00 16 5 1 3 2 2 3
..........................................................................................................CTAAAGCTTTTATACCAAAGC.............................................................. 21 0 1 16.00 16 1 14 0 1 0 0
..............................................................TCTTTGGTATTCTAGCGGTAGA......................................................................................................... 22 1 1 16.00 16 0 11 3 1 1 0
..............................................................TCTTTGGTATTCCAGCTGTAGA......................................................................................................... 22 1 1 16.00 16 4 6 3 1 2 0
..............................................................TCTTTGGTATTCTAGCTATAGA......................................................................................................... 22 1 1 16.00 16 4 7 4 0 1 0
................................................................TGTGGTATTCTAGCTGTAGA......................................................................................................... 20 1 1 16.00 16 0 16 0 0 0 0
.............................................................TTCTTTGGTATTCTAGCTGTAGA......................................................................................................... 23 0 1 16.00 16 16 0 0 0 0 0
..............................................................TCTTTGGTATTCTACCTGTAG.......................................................................................................... 21 1 1 16.00 16 3 8 0 2 1 2
................................................................TTTGGTATTCTAGCTGTAGAA........................................................................................................ 21 1 1 15.00 15 7 7 1 0 0 0
...........................................................................................................TAATGCTTTTATACCAAAGCC............................................................. 21 2 1 15.00 15 0 15 0 0 0 0
..........................................................GATCTCTTTGGTATTCTAGCTGTAGA......................................................................................................... 26 3 1 15.00 15 0 15 0 0 0 0
...........................................................................................................TAAAGCTTTTCTACCAAAGCT............................................................. 21 1 1 15.00 15 0 15 0 0 0 0
..............................................................TTTTTGGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 15.00 15 1 14 0 0 0 0
................................................................TTTGGTATTCTAGCTGTAGAAA....................................................................................................... 22 2 2 14.50 29 24 4 1 0 0 0
..............................................................TCTTTGGTATTCTCGCTGTAGA......................................................................................................... 22 1 1 14.00 14 1 3 5 0 2 3
..............................................................TCTTCGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 14.00 14 3 4 2 1 4 0
...............................................................CGTTGGTATTCTAGCTGTAGA......................................................................................................... 21 1 1 14.00 14 0 14 0 0 0 0
...............................................................CTTTGGTATTCGAGCTGTAGA......................................................................................................... 21 1 1 14.00 14 14 0 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAAAAA....................................................................................................... 24 3 1 14.00 14 9 3 0 2 0 0
...............................................................CTTTGGTATTCTAGCTGTAGATA....................................................................................................... 23 1 1 13.00 13 13 0 0 0 0 0
....................................................................................TGGTTTTCACATATTGTATCATC.................................................................................. 23 1 1 13.00 13 0 13 0 0 0 0
..............................................................TCTTTGGTATTCTTGCTGTAG.......................................................................................................... 21 1 1 13.00 13 1 0 6 2 1 3
.............................................................GTCTTTGGTATTCTAGCTGTAG.......................................................................................................... 22 1 1 13.00 13 13 0 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCAAAG............................................................... 19 0 1 13.00 13 11 2 0 0 0 0
................................................................TGTGGTATTCTAGCTGTAGATT....................................................................................................... 22 1 1 12.00 12 0 12 0 0 0 0
..............................................................TCTTTGGTATTCTAACTGTAGA......................................................................................................... 22 1 1 12.00 12 1 4 4 0 1 2
.............................................................ATCTTTGGTATTCTAGCTGTAGA......................................................................................................... 23 1 1 12.00 12 12 0 0 0 0 0
..............................................................ACTTTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 12.00 12 1 6 2 0 3 0
..............................................................TCTTTGCTATTCTAGCTGTAG.......................................................................................................... 21 1 1 12.00 12 3 3 2 1 2 1
..............................................................TCTTTGGTATTCTAGCTCTAGA......................................................................................................... 22 1 1 12.00 12 4 3 5 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTT........................................................................................................... 20 1 1 12.00 12 7 3 0 1 0 1
..............................................................TGTTTTGTATTCTAGCTGTAGA......................................................................................................... 22 2 1 11.00 11 0 11 0 0 0 0
..............................................................TCCTTGGTATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 11.00 11 0 11 0 0 0 0
...........................................................................................................TTAAGCTTTTATACCAAAGCT............................................................. 21 1 1 11.00 11 0 11 0 0 0 0
..............................................................TCTTTGGTTTTCTAGCTGTAG.......................................................................................................... 21 1 1 11.00 11 2 1 4 0 2 2
..............................................................TCTTTGGTCTTCTAGCTGTAG.......................................................................................................... 21 1 1 11.00 11 0 3 4 0 1 3
..............................................................TCGTTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 11.00 11 0 3 3 0 1 4
..............................................................TCTTTGGTATTCTCGCTGTCG.......................................................................................................... 21 2 1 10.00 10 0 0 3 0 1 6
...........................................................................................................TAAAGCTTTTATACCAAAGCTA............................................................ 22 1 1 10.00 10 5 5 0 0 0 0
.............................................................GTCTTTGGTATTCTAGCTGTAGA......................................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
.............................................................TTCTTTGGTATTCTAGCTGTAG.......................................................................................................... 22 0 1 10.00 10 10 0 0 0 0 0
..............................................................TCCTTGGAATTCTAGCTGTAGA......................................................................................................... 22 2 1 10.00 10 0 10 0 0 0 0
..............................................................TCTTTGCTATTCTAGCTGTAGA......................................................................................................... 22 1 1 10.00 10 4 5 1 0 0 0
.............................................................ATCTTTGGTATTCTAGCTGTAG.......................................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCAAACCTC............................................................ 22 1 1 10.00 10 0 10 0 0 0 0
..............................................................TCTTTCGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 10.00 10 3 5 0 1 0 1
..............................................................TCTTTGGTCTTCTAGCTGTAGA......................................................................................................... 22 1 1 10.00 10 1 5 3 0 0 1
..............................................................TCTTTGGTATTCTAGCTAGA........................................................................................................... 20 2 1 10.00 10 0 9 0 1 0 0
..............................................................TCTTTGATATTCTAGCTGTAG.......................................................................................................... 21 1 1 10.00 10 1 3 2 1 2 1
..............................................................TCTCTGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 10.00 10 0 10 0 0 0 0
..............................................................TCTTTGGTATTCTTGCTGTAGA......................................................................................................... 22 1 1 10.00 10 2 5 3 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTATG......................................................................................................... 22 2 2 9.50 19 0 16 3 0 0 0
.............................................................CTCTTTGGTATTCTAGCTGTAGAA........................................................................................................ 24 2 1 9.00 9 0 9 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGTT........................................................................................................ 23 1 1 9.00 9 3 5 0 1 0 0
..............................................................TCTTTGGTATTGTAGCTGTAGAT........................................................................................................ 23 1 1 9.00 9 9 0 0 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGATAAA..................................................................................................... 25 3 1 9.00 9 9 0 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCAAATCTC............................................................ 22 1 1 9.00 9 1 8 0 0 0 0
..............................................................TCTTTGTTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 9.00 9 0 9 0 0 0 0
.......................................................................................................GATCTAAAGCTTTTATACCAAAGCT............................................................. 25 1 1 9.00 9 0 9 0 0 0 0
...........................................................................................................TAAAGCTTTTATCCCAAAGCT............................................................. 21 1 1 9.00 9 0 9 0 0 0 0
..............................................................TCATTGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 9.00 9 8 0 0 0 0 1
...........................................................................................................TGAAGCTTTTATACCAAAGCC............................................................. 21 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGGTATTCTAGCTGTAGATC....................................................................................................... 22 1 1 9.00 9 1 7 0 0 0 1
................................................................TCTTGTATTCTAGCTGTAGA......................................................................................................... 20 2 2 9.00 18 2 16 0 0 0 0
..............................................................TCTTTGGAATTCTAGCTGTAGAA........................................................................................................ 23 2 1 9.00 9 0 9 0 0 0 0
..............................................................TGCTTGGTATTCTAGCTGTAGA......................................................................................................... 22 2 1 9.00 9 0 9 0 0 0 0
...............................................................CTTTGGTATTCGAGCTGTAG.......................................................................................................... 20 1 1 8.00 8 8 0 0 0 0 0
..............................................................TCTTTTGTATTCTAGCTGTAGAA........................................................................................................ 23 2 1 8.00 8 0 8 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGAAGA......................................................................................................... 22 1 1 8.00 8 1 7 0 0 0 0
..............................................................TCTTTGGCATTCTAGCTGTAGAA........................................................................................................ 23 2 1 8.00 8 0 7 1 0 0 0
..........................................................................................................CGAAAGCTTTTATACCAAAGCT............................................................. 22 1 1 8.00 8 0 8 0 0 0 0
..............................................................TCTTTGGTATTCTAGCGGTAG.......................................................................................................... 21 1 1 8.00 8 0 2 2 0 2 2
..............................................................TGTTTGGTATTCTAGCTGTAGATA....................................................................................................... 24 2 1 8.00 8 0 8 0 0 0 0
..............................................................TCTGTGTTATTCTAGCTGTAGA......................................................................................................... 22 2 1 8.00 8 0 8 0 0 0 0
..............................................................TCTTAGGTATTCTAGCTGTAG.......................................................................................................... 21 1 1 8.00 8 2 3 2 0 1 0
..............................................................TCTTTGGTATTCTAGCTGTAGACA....................................................................................................... 24 2 1 8.00 8 1 5 2 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGT......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
.............................................................CTATTTGGTATTCTAGCTGTAGA......................................................................................................... 23 2 1 7.00 7 0 7 0 0 0 0
..............................................................TCTTTGGTATTCTAGGTGTAG.......................................................................................................... 21 1 1 7.00 7 6 0 0 0 1 0
................................................................TTTGGTATTCTAGCTGTAGAC........................................................................................................ 21 1 1 7.00 7 0 7 0 0 0 0
...........................................................................................................TAAAGCTTTTATACAAAAGCT............................................................. 21 1 1 7.00 7 0 7 0 0 0 0
............................................................TCTCTTTGGTATTCTAGCTGTAGA......................................................................................................... 24 1 1 7.00 7 0 7 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTACA......................................................................................................... 22 1 1 7.00 7 2 4 1 0 0 0
..............................................................TCTTTGGTATTCTAGCAGTAGA......................................................................................................... 22 1 1 7.00 7 1 4 0 0 2 0
..............................................................TCTTTGGTATTGTAGCTGTAGAAA....................................................................................................... 24 3 1 7.00 7 7 0 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGAAAC...................................................................................................... 25 3 1 7.00 7 2 4 1 0 0 0
.................................................................TTGGTATTCTAGCTGTAGAA........................................................................................................ 20 1 1 7.00 7 3 4 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGTA........................................................................................................ 23 2 1 7.00 7 1 3 2 1 0 0
..............................................................TCTTGGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 7.00 7 1 4 1 0 0 1
..............................................................TCTGTGGTATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 7.00 7 0 7 0 0 0 0
.........................................................................................................TGTAAAGCTTTTATACCAAAGCT............................................................. 23 1 1 7.00 7 0 7 0 0 0 0
..............................................................TCTTTGGGATTCTAGCTGTAT.......................................................................................................... 21 2 1 7.00 7 0 0 1 0 3 3
................................................................TGTGGTATTCTAGCTGTAGAT........................................................................................................ 21 1 1 7.00 7 0 7 0 0 0 0
..............................................................TCTGTGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 7.00 7 0 7 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGTAA....................................................................................................... 24 3 1 7.00 7 4 0 2 1 0 0
..............................................................TCCTTGGTATTCTAGCTGTAGATA....................................................................................................... 24 2 1 7.00 7 0 7 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCAAAGCTCC........................................................... 23 0 1 6.00 6 0 6 0 0 0 0
...........................................................................................................AAAAGCTTTTATACCAAAGCT............................................................. 21 1 1 6.00 6 0 6 0 0 0 0
.................................................................TTGGTATTCTAGCTGTAGAT........................................................................................................ 20 0 1 6.00 6 6 0 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTATC......................................................................................................... 22 2 2 6.00 12 1 5 3 1 1 1
..............................................................TCTTTGGTATTCTAGCTGTAGGAA....................................................................................................... 24 3 1 6.00 6 2 0 3 1 0 0
..............................................................TGTTTGGAATTCTAGCTGTAGA......................................................................................................... 22 2 1 6.00 6 0 6 0 0 0 0
.TCACTGTTCTATATGGATT......................................................................................................................................................................... 19 2 3 6.00 18 18 0 0 0 0 0
..............................................................TCGTTGGTATTCTAGCTGGAG.......................................................................................................... 21 2 1 6.00 6 0 0 3 0 2 1
..............................................................TCTTTGGGATTCTAGCTGGAGA......................................................................................................... 22 2 1 6.00 6 0 0 1 0 2 3
.................................................................TGGGTATTCTAGCTGTAGA......................................................................................................... 19 1 1 6.00 6 0 6 0 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGAG........................................................................................................ 22 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCAAAGCTCT........................................................... 23 1 1 6.00 6 0 6 0 0 0 0
..............................................................TCTTTGGCATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 6.00 6 4 2 0 0 0 0
..............................................................TCTTTGGTATTCGAGCTGTAG.......................................................................................................... 21 1 1 6.00 6 1 0 2 0 2 1
..............................................................TCTTTGGTATTCTAGCTATAG.......................................................................................................... 21 1 1 6.00 6 1 2 0 0 1 2
...............................................................CTTTGGTATTCTAGCTGTAA.......................................................................................................... 20 1 1 6.00 6 6 0 0 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGATAA...................................................................................................... 24 2 1 6.00 6 6 0 0 0 0 0
..............................................................TCTTTGGTATTCAAGCTGTAGA......................................................................................................... 22 1 1 6.00 6 2 2 2 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAGATT....................................................................................................... 23 0 1 6.00 6 5 1 0 0 0 0
...........................................................................................................TTAAGCTTTTATACCAAAGCTC............................................................ 22 1 1 6.00 6 0 6 0 0 0 0
..............................................................TCATTGGTATTCTAGCTGTAGA......................................................................................................... 22 1 1 6.00 6 3 2 1 0 0 0
..............................................................TCTTTGGTATTGTAGCTGTAGAA........................................................................................................ 23 2 1 6.00 6 6 0 0 0 0 0
..............................................................TCTCTGGTATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 5.00 5 0 2 2 1 0 0
..............................................................TCTTTGGTATGCTAGCTGTAG.......................................................................................................... 21 1 2 5.00 10 3 0 2 0 2 3
..............................................................TCTTTGGTATTCTATCTTTAG.......................................................................................................... 21 2 1 5.00 5 0 0 1 0 0 4
..................................................................TGGTATTCTAGCTGTAGAT........................................................................................................ 19 0 1 5.00 5 5 0 0 0 0 0
................................................................TTTGGTATTCTAGCTGTAGATTAAA.................................................................................................... 25 3 1 5.00 5 5 0 0 0 0 0
...........................................................................................................TAAAGCCTTTATACCAAAGCTC............................................................ 22 1 1 5.00 5 0 5 0 0 0 0
..............................................................TCTTTGGGATTCTAGCTGGAG.......................................................................................................... 21 2 1 5.00 5 0 0 2 0 1 2
..............................................................TCTTTGGTATTCTAGCTGTAGAGA....................................................................................................... 24 2 1 5.00 5 2 2 1 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGCT........................................................................................................ 23 1 1 5.00 5 1 0 1 1 0 2
..............................................................TCTTTGGGATTCTAGCTGTA........................................................................................................... 20 1 1 5.00 5 1 1 1 2 0 0
...........................................................................................................TAAAGCTTTTATACCAAAGCTCA........................................................... 23 1 1 5.00 5 2 3 0 0 0 0
.................................................................TTGGTATTCTAGCTGTAGATT....................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0
..............................................................TCTTTGGTATTATAGCTGTAGAT........................................................................................................ 23 1 1 5.00 5 5 0 0 0 0 0
..............................................................TCTTTGGTATTCTATCTGTAGC......................................................................................................... 22 2 1 5.00 5 0 0 3 0 1 1
..............................................................TCTTTGGAATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 5.00 5 1 4 0 0 0 0
..............................................................TCTTTGGTTTTCTAGCTGTAGG......................................................................................................... 22 2 2 5.00 10 0 0 10 0 0 0
..............................................................TGTTTGTTATTCTAGCTGTAGA......................................................................................................... 22 2 1 5.00 5 0 5 0 0 0 0
.........................................................................................................TGTAAAGCTTTTATACCAAAGC.............................................................. 22 1 1 5.00 5 0 5 0 0 0 0
..............................................................TGTTTGGTATTCTAGCTGTAGC......................................................................................................... 22 2 1 5.00 5 0 5 0 0 0 0
..............................................................TCTATGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 5.00 5 0 5 0 0 0 0
..............................................................CCTTTGGTATTCTAGCTGTAGAT........................................................................................................ 23 1 1 5.00 5 2 3 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTTTAT.......................................................................................................... 21 2 2 5.00 10 0 0 3 0 1 6
..............................................................TGTTTGGTATTCTAGTTGTAGA......................................................................................................... 22 2 1 5.00 5 0 5 0 0 0 0
...........................................................................................................TAAAGCTTTTATACCTAAGCT............................................................. 21 1 1 5.00 5 0 5 0 0 0 0
..............................................................TCTTTGGCATTCTAGCTGTAGAT........................................................................................................ 23 1 1 5.00 5 1 4 0 0 0 0
..............................................................TCTTTGGTATACTAGCTGTAGA......................................................................................................... 22 1 1 5.00 5 0 5 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTATT......................................................................................................... 22 2 1 5.00 5 3 1 0 0 0 1
..............................................................TCTTTGGTATTCTAGCTGTAGAAAT...................................................................................................... 25 3 1 4.00 4 3 1 0 0 0 0
..............................................................TCTTTGGTTTTCTAGCTGTAGA......................................................................................................... 22 1 1 4.00 4 0 0 4 0 0 0
...........................................................................................................TAAAGCTTTTCTACCAAAGCTC............................................................ 22 1 1 4.00 4 0 4 0 0 0 0
.........................................................................................................TCTAAAGCTTTTATACCAAAGCTC............................................................ 24 0 1 4.00 4 0 4 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTGGT......................................................................................................... 22 2 1 4.00 4 0 0 4 0 0 0
..............................................................TCTTTTGTATTCTAGCTGTAGAAA....................................................................................................... 24 3 1 4.00 4 2 2 0 0 0 0
...........................................................................................................AAAAGCTTTTATACCAAAGCTC............................................................ 22 1 1 4.00 4 0 4 0 0 0 0
...............................................................CTTTGGTATTCTAGCTGTAAA......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..............................................................TGTTTGGTATTCTAGCTGTAGAAT....................................................................................................... 24 2 1 4.00 4 0 4 0 0 0 0
..............................................................TCTTTGGTATTCTAGCTGTAGTC........................................................................................................ 23 2 1 4.00 4 3 0 0 1 0 0

Anti-sense strand reads

GAGTGACAAGATATACAAAAAACAGAGTGGGTGTGTTAACGGTGAGAAAGTAAAAACGACAAAGAAACCATAAGATCGACATCTAACAAAAGTGTATAACATAGTAGATTTCGAAAATATGGTTTCGAGGTCGAATTTAACGAACTGTGGCGGGTTGGCGAGCGTGTTAGGCGGTTGTAGTCATTTTGT

**********************************************...((((..((((...(((((((((...((((.(((((.((.............)).))))).))))...)))))))))...))))..))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V049

head

 V056

head

 V110

male body
.AGTGACAAGATATACCTAA......................................................................................................................................................................... 19 2 3 0.67 2 2 0 0 0 0
.AGTGACAAGATATACCTA.......................................................................................................................................................................... 18 2 6 0.67 4 2 0 2 0 0
..GTGACAAGATATACCTAAG........................................................................................................................................................................ 19 3 20 0.65 13 13 0 0 0 0
..............................................................CGAAACCATTAGATCGAAATCTA........................................................................................................ 23 3 2 0.50 1 0 1 0 0 0
............................................................AAAGAAACCATTAGATCGAAAT........................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
.............................................................AAGAAACAATAAGATCGAAAT........................................................................................................... 21 2 3 0.33 1 0 0 0 1 0
..GTGACAAGATATACCTAAA........................................................................................................................................................................ 19 2 3 0.33 1 1 0 0 0 0
.AGTGACAAGATATACCTAAG........................................................................................................................................................................ 20 3 15 0.13 2 0 0 0 0 2
.................................................................................................ACCATAGTTGATTTCAAAAA........................................................................ 20 3 20 0.10 2 0 2 0 0 0
............................................................AAAAAAACCATTAGATCGAAAT........................................................................................................... 22 3 17 0.06 1 1 0 0 0 0
...................................................................................................................AATATTGTTTGGAAGTCGAA...................................................... 20 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:7201295-7201483 + dmo-mir-9c Known_mirbase CTCACT------GTTCT------------------------ATATGTT---TT------------TTG---------------TC-T------------------------CACC---------------------------CACACAATTGCCAC-TC---TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-T------CACATATTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGA-CACCGCCC-AAC-CGC-----------------------TCGCACAATCCGCCA------------AC----ATCAGTA--AAACA
droVir3 scaffold_12963:12863809-12863995 - dvi-mir-9c Known_mirbase CTCACA------ATT------------------------------------CC------------ATG-----------------------------------TTTTGTCTCACCCACACA-------CACACACACACACACAC--------ACA--AT--TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-T------TACAGTTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CACCGCCCGCAC------------------------------------CCGCCA------------AC----ATCAGCA-TCAACA
droGri2 scaffold_14978:830139-830355 + dgr-mir-9c Known_mirbase CTCACC------ATGCTA-------------TGTTT---CACCATGTT---TT------------TTG---------------TC-T------------------------TAACTATATAGTTAGTAC-----------CACACACAATTGCAAT--TTC-TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-C------TATATCTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CACCGCCTGCAC-C----------------------------------CCGCCACCAACAGCAACAGCAACAA--AAA---CAACA
droWil2 scf2_1100000004945:875181-875384 - dwi-mir-9c-2 Known_mirbase CAAC--------TTTTTTTATATTTTTTCCACA--------TTTT-CT---TCCTCCCCTCTTCA--CC-----------ATC--------TTTTCCTCTCCC--------------------------------------------------TCC--A-T-CATCATTTTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CAACGCACCCCA--AA----------------------------------AACA------------AA----ATAAAAT-GCAACA
dp5 4_group3:8443141-8443341 + dps-mir-9c Known_mirbase ATCTCT------CTCCC---------------A--------TTCG-CT---GTCTGTCGACTTCCATGC-----------ACT--------------------TTTTGT--------------------------------------------TCT-CC---TTTAAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAA----------------------------------CAACAACAGTAACTACAGTAATCAGA---AAACG
droPer2 scaffold_1:9894263-9894460 + dpe-mir-9c Known_mirbase ATCTCT------CTCCC---------------A--------TTCG-CT---GTCTGCCGCCTTCCATGC-----------ACT--------------------TTTTGT--------------------------------------------TCT-CC---TTTAAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAACAACAGTAACT-------------------------------------ACAGTAATCAGA---AAACG
droAna3 scaffold_12916:15865425-15865605 - dan-mir-9c Known_mirbase T---------------T------------------------TTTGGTTAACCT-----------------------TCTCTCCTC-ACGC---------------------------------------------------------------ACTCCCTTTCATTAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAACAACAACAACA-------------------------------------ACAGGAATG------ATACA
droBip1 scf7180000396717:104159-104353 - TT---------------------------------------TTTGGT------------------------TCACTCTTCTCCTCACCGCACCTCCTTCT-----------------------------------------------------ACTTTTTT-CATTAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTTTCA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCACCAAACAACAACAACAACA-------------------------------------ACAAATATATAT---ATATG
droKik1 scf7180000302382:528723-528868 + TTTTC-----------------------------------------------C------------T----------CCTCTCG-C-TCGC---------------------------------------------------------------ACTCTCTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CAC-ACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAAACAACGCACCAGC-------------------------------------------------------------------------A
droFic1 scf7180000454078:623484-623630 + ---------------------------------------------GTT---CT------------ATG--CTCGCATTTCTCCTC-TCGC---------------------------------------------------------------ACT--TCT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTACAGCTTAAATTGCTTAA-CAACGCACCAG---------------------------------------------------------------------------
droEle1 scf7180000490579:646078-646216 - C----------------------------------------------------------------------TCACGTTTTTCCTC-TCGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAG---------------------------------------------------------------------------
droRho1 scf7180000768553:8826-8981 + TTCTCT-------TTTT------------------------TTCGGTT---TA------------ATG--CTCACATTTCTCCTC-TCGC---------------------------------------------------------------ACT--TTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGC--------------------------------------------------------------------------------
droBia1 scf7180000301468:857432-857612 + ATTTC----------TT------------------------TTCGGTT---CC------------ATG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ACT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CACGACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAGC-T------------------------------------ACCA------------AC----CTCAGACAG--CCA
droTak1 scf7180000415914:422121-422268 + ---------------------------------------------GTT---CT------------ATG--CTCACATTTCTCCTC-CTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACAAGC--------------------------------------------------------------------------
droEug1 scf7180000408961:271785-271949 + CAGCCC------ATTTT------------------------TTCGGTT---TT------------ATGCGCTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATAGCTTAAGCAACGCACCAG---------------------------------------------------------------------------
dm3 chr2L:16697874-16698049 + dme-mir-9c Known_mirbase CATT--------TTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CATGATA----------------------TTTCACCCGCTTGCCAAA-------------------------------------TC
droSim2 2l:16264658-16264834 + dsi_273 confident TGTACTCGCCCA-------------------CATTTTTTTTTTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-----------------------------------------------------------------------CCA
droSec2 scaffold_7:344901-345020 + dse-mir-9c Known_mirbase T---------------------------------------------------------------------------------------------------------------------------------------------------------------T-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-----------------------------------------------------------------------CCA
droYak3 2R:4405046-4405221 - dya-mir-9c Known_mirbase TCGCCC-----ACTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CG---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAGCGCACCAAC----------------------------------------CA------------A--------AAACAG--CCA
droEre2 scaffold_4845:19767483-19767647 + der-mir-9c Known_mirbase TCGCCC------TTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTA-TTGC---------------------------------------------------------------ACC--TTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CG---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC------------------------------------------------------------------------CA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTCACT------GTTCT------------------------ATATGTT---TT------------TTG---------------TC-T------------------------CACC---------------------------CACACAATTGCCAC-TC---TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-T------CACATATTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGA-CACCGCCC-AAC-CGC-----------------------TCGCACAATCCGCCA------------AC----ATCAGTA--AAACASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22156810.00568102626841969561220219722198
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21142360.00423602225752261901246355204993
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2413001.0030012172314141939785
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2312943.0029439606755189511
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2312336.00233614315192176559
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2112322.0023222219101983
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2011791.0017911765612143
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................2111767.001767322141414260
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................2211015.0010151092009040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251756.0075668520223314
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201630.0063030419173717776
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCC.........................................................................................................211407.0040700004070
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................201320.0032015931241177
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................241266.0026613125011054
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................231242.0024224100010
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................221220.0022032552310721
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................241180.001805426587512
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................211169.001691151266219
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................201150.0015070001430
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191146.001461061525810
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................231144.00144303201027
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................221133.0013312800050
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................191132.00132784512303
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221130.00130313074499
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................231128.00128181001090
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211126.001262084925195
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................221121.001212120137555
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................261104.001048731184
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22185.00857800070
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................22184.008411100720
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25182.0082561301120
.........................................................................................................................................................................................................TTGTTT-T------CACATATTGTATCATC..............................................................................................................................23180.00803600710
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21177.007724932363
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19170.007033101305
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................24170.0070180431332
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18167.00672011630
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGC..........................................................................................................22159.00590000590
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................22158.0058191543152
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................21149.00494101412
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24236.00727200000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................18131.00311831063
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................20131.00312500060
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23129.00292032220
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCC.........................................................................................................23128.00280000280
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................18126.002615000110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24124.00242301180
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTT........................................................................................................22124.002410000140
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................24119.00191110070
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................22118.0018580050
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................19118.00181800000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCTC........................................................................................................23117.00172000150
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................21117.00171200050
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCC.........................................................................................................22117.00170000170
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGC..........................................................................................................21116.00161000141
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23116.00161600000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................21115.0015710070
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................22214.50292410040
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................23113.00131300000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................19113.00131100020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................20112.0012701031
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................22110.0010500050
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................22110.00101000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................2229.50190300160
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2519.009900000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2219.009101070
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2418.008120050
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2117.007700000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................2117.007000070
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................2517.007210040
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2017.007300040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................2317.007120031
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTAA..........................................................................................................................................................2417.007420001
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCC.......................................................................................................2316.006000060
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2016.006600000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATC............................................................................................................................................................2226.0012131151
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAA..........................................................................................................................................................2416.006230001
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................2216.006600000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCT.......................................................................................................2316.006000060
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2016.006600000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2416.006600000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2316.006500010
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGAT...........................................................................................................................................................1915.005500000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTAAA.......................................................................................................................................................2515.005500000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2415.005210020
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCA.......................................................................................................2315.005200030
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2115.005500000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATT............................................................................................................................................................2215.005301010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................2514.004300010
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCTC........................................................................................................2414.004000040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTC...........................................................................................................................................................2314.004300001
droVir3
CTCACA------ATT------------------------------------CC------------ATG-----------------------------------TTTTGTCTCACCCACACA-------CACACACACACACACAC--------ACA--AT--TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-T------TACAGTTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CACCGCCCGCAC------------------------------------CCGCCA------------AC----ATCAGCA-TCAACASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2211494838.001494838254632501493120891178414002037059798921645331542914572265431266982731551042176116323188278913712813509157344811335216563996473113186337112824511797457642440217510380345285529474398750431755438270297249179129272651159478615552555158761424524310133500206753198382144174137447192050157603280389314134253021930390
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................211527669.0052766934717652105095356979219917063701415627501495760527633127694602175772871226131160631139894824355164255442705660132914899837843899372246454772367774117241142829262232152946245224132891716264621792787365705832882289893119420495345323529325616218502993229111175278985111992322822559
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................241115534.00115534121386914146829976201731258785649959742211133171009135573321201127484812662199321448448140062064350840122424181814761499732300117248812014959151695716006873721592546146015431607155860272793322086928701
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................23160413.0060413919540353565113115554110699711020111058012166231163342782416911293651391496191762424328443629751741171681001112881060178130107441101344481851200712708901665108320992602313669816524
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18133224.0033224339662448110822101100110070286441884722132529146151403265533985447742384127131240690000102843064236176679842784602441328092628598367349
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................23132449.0032449343540579279313101010122411023401891117042318352230213425455155884612516631147227125201198464113839106181014538710716207200193339249925762632217223881739153520951799182363383422112032
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................25120087.002008700305158241544142191853670000017002054421636702743711561163689701472434102641532011111100000001201005282533034264910771031347382778677641051812751368
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................24112426.0012426315318502444935118491060100103001750366160551065044804755281414143035000120001223000305816371630120028434920518928620359857272318051659
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2215431.00543127814185475338127223500003010119181240515269154161214111720031412001231320004151401216254214313718672301394569492198108113257272
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2413726.003726964231243344209747153102306143619183426181251924416321626561401212112403311200111147112152983033512232352091592191621897786268261
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................2213168.00316800806261170511010411916251315028381219197298252482994483253123603610500000001000000000000004433635900084718400000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2613104.00310400223701017024164000000000204831923400019936111417173880000000000000000000020003922578505220163541161408992237224
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................2012855.0028553101034175616384931603120110005027242233155381051930914111510200001020001020039450133911499139309258179215224164905567138135
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2512820.00282000151171380604278000000201204345935913021572951822261269810000000000011000000300130173203031971310610281179781171177
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................2012554.0025541037141985171123225465133102813715153414918239253839737936642337232312185791101010112024100024223139044110496676566403070465233367677
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................2212224.0022241551021916307291170210112103401331734112213202122594011002010116010000008820002712822381711710171017638197
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................2112080.00208011456467247511200051261346231224148121207016916366472358621819287312711000000000001000001024071664510649373571001
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2211883.001883226122925670213531226026111505341377162227113158715852121000021111110101001261770713151158102996978559484644241125121
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2411749.00174951348116000101200000020015401101034399158292360001000100000100000101011215226149444735404748986086158197
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................2311687.00168753822192229190664012200010750119991419745035984392997205100011101302101001047122126645754929365761281003313275447
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................2211672.001672419415140283371143201000000010026732102313424722137000000101000001101152601211987849875578985510122530
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2111662.001662138713533142313230001171081392746994819281291094000000002100000100232202178310912914111265869679904946122118
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2111616.00161621126739070131401110000030010101329237636501114812110000100010000000000122032253231416132017011710
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................2411452.001452006601208010020000000003714801201006101581700000000000000000001300045251233139382216132230875671169174
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................1911406.0014069312941114815220519811062175648103911181491581098118211311020223223111210233233011364230150191118791077531771916
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2011090.00109033910042800301630010004004633259712217109535000000000000000000015300010065327303253
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2411054.001054460207131570041201000000440031222392413353240010651011001110101000000200424440372357776759117852114172625
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................221982.0098201101001435164000000000321650000204134100010000000000000000000034737010152804247592869524210496
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211980.00980056111650713146110783256113444240434531641218955521828000000000000000000096265012212620022220161028
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................211953.0095332264122200724191320530251125251115113327103233112027493617120000000000000000020889045587244912133923214293954
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................241934.0093400164013030201300000000073144100120552230300000010000100000004000501621351033833192119215533267283
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................231812.0081201142120161134421071001004002211810145527183151321122220000000000000100000101013108097331419131622173027206749
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191476.0047600632823201004313401010051024732101070154875174919000000000000000000046701121811181017341314926129
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCAA..........................................................................................................................................................241449.00449000071180104000000000100231000000011225342830000000000000000000001000001007959000000330000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................191422.0042211412192440110200230000000045135863230337513740000000000000000000100011171014269116815515111511
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................241315.003150040200020114200000010010241100210264211000000000000000000002000315147227166266161092631
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACC..........................................................................................................................................................241309.0030916034110000001000000030010000321200000022001111000230002015100101051725247526363055431
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................241300.003000040206020001400000010033044130060556141000000010000000000041000926342314348164149162721
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................251290.0029000231020001020000000000221200000101300900000000000010000001000010526514391634912132638
...................................................................................................................................................................................TCTTTGGTATTCTAGC..................................................................................................................................................................161264.00264000000000000000000000000000000000000000012111615101715112014341391555792600000000000000000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................221226.002260011120401406123000000000611531000503107250100000000000000000010001251620143230389105912
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................211226.00226001000100000030000000000111200001002101000000000100000000000000122122151921641314131162220
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCA...........................................................................................................................................................231226.00226000000100000000000000001000000000111738000000000000000000000100000667736000010130000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................211213.0021315421542100000033021100320010104111130611111800000000000000000004131011103601000071201
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAACA.........................................................................................................................................................251180.00180002000200000000000000003000000000042827111600000000000000000000000000141393516211014513
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................231171.001710096010203000100000000002425200006021113711000000000000000000010000010110000101141
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................181170.001700017062190200122000000100132363300352134674000000000000000000002102835630142152044
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................251166.00166001000001010100100001001219200003049647000000000000000000000000422725104400345311010
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................181160.0016000180901600010020100002001883571300234712010000000000000000000001002036000300170176
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAT.........................................................................................................................................................251156.0015600000031101010000000000112330010804235701000000000100000000000037152315030002548157
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................241122.0012200000000000010000000000012510000100234500000000000000000000000001171790020006681714
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACAA.........................................................................................................................................................251109.00109002030000000000000000006101000003017649000000000000000000001000201715410000043568
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................221109.00109400040301110100000005005011025020101002300000000000000000000000043279821105120111
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTAAA.......................................................................................................................................................251107.00107000000000011100000000000108200003021823000000000000000000001000031616600010093487
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................221106.001060029000000000000000000000119010010028210100000000000000000000000193000000100000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................231103.0010300100010202012000000000010200000200311000000000000000000000200002741143237884559
...................................................................................................................................................................................TCTTTGGTATTCTAGCT.................................................................................................................................................................17193.00930000000000000000000000000000000000000000100000000000100000000003311111600000013111517
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................23192.0092001010200000010000000002212000004013337000000000000000000000000229810000000434116
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................21185.008500840000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTAAA.......................................................................................................................................................27179.0079003000000000000000000000001300003034300000000000000000000000000012071000011042247
.........................................................................................................................................................................................................TTGTTT-T------TACAGTTTGTATCATC..............................................................................................................................23178.007800210000000000001000001045785302201320200000000000000000000000019600002020000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTAA........................................................................................................................................................26174.00740011000000000000000000010403010040586430000000000000000000000000283510000031352
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTAA........................................................................................................................................................24171.00710000000000001000000000011221000030243520000000000000000000010000088502000033167
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTT.........................................................................................................................................................25171.00710020200000001000000001010420022400303221000000002110000000000110674430000020133
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................23168.006800108000000100011000001102137110210232110000000000000000000000006510122000100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................22265.0013000000030100011200000000132243303100510010000000000000000000011002312019000000180001
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22163.006300260001000000000000000000352010002010110000000000000000000000000032470001200010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCT.........................................................................................................................................................25160.00601002020000000000000000000000131201000002000000000000000000000000034533403642251
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................25159.005900000000000020000001000010221001100201000000000000000000000100011105401052114135
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAG........................................................................................................................................................26159.0059000000000000000000000000001000000010112000000000000000000000000001610501010028235
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCA.........................................................................................................................................................25156.00561010100000000000000000020100220101282421000000000000000000000000032600141223010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAA..........................................................................................................................................................24155.005500000020300001000000000100000000100210600000000000000000000000040031100000024914
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCA.......................................................................................................23154.005400200000000000000000001030411000105211100000000000000000000000022900000000000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................21154.00540051001010000100000000022120000020252120000000000000000000000004143400000040004
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................20153.005300162000000000021010002111152310220122000000000000000000000000000102200000000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22152.005200421000000000000000000000001000010000100000000000000000000000000001100000101020
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................22150.00500061100000000010000000107276100010102110000000000000000000000002400002003000000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23145.004500140000000000000000000000001000000000000020030514020101000000000221020010000021
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................23145.00450110000000000000000000010000110100001110000000000000000000010000036400200112295
........................................................................................................................................................................................GGTATTCTAGCTGTAGA............................................................................................................................................................17144.00440000000000000000000000000000000000000000000000000000000000000001568900000070233
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................20138.003800341000000000000000000001001000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................19337.67113001030140924032100001320931364502334112113000000000000000000000200300200000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGA...........................................................................................................................................................23134.00340000001000000000000000000100001000110000000000000000000000010000012100000015468
droGri2
CTCACC------ATGCTA-------------TGTTT---CACCATGTT---TT------------TTG---------------TC-T------------------------TAACTATATAGTTAGTAC-----------CACACACAATTGCAAT--TTC-TTTCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-C------TATATCTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CACCGCCTGCAC-C----------------------------------CCGCCACCAACAGCAACAGCAACAA--AAA---CAACASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21111451.001145147226729
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2213941.00394121911750
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................201399.003993918
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201195.0019513164
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................211188.001881862
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................231109.001097930
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211102.001021020
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................22162.0062611
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................19148.00483513
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................22145.00452124
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................23138.00382612
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................19136.0036279
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................20133.00332310
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................24111.001147
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21111.001138
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................21110.001046
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................2019.00990
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2219.00936
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................2219.00981
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2218.00880
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................1818.00871
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2217.00770
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2117.00743
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................2316.00642
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................2116.00624
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................2215.00532
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................1815.00550
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2315.00550
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................1915.00550
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2214.00440
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................2314.00440
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................1913.00303
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................2113.00330
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2113.00330
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2313.00330
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................1913.00330
.........................................................................................................................................................................................................................................AAGCTTTTATACCAAAGCTC........................................................................................................2012.00220
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2012.00211
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................2012.00220
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAT.............................................................................................................................................................2012.00220
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................1812.00220
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2412.00211
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................2511.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................2411.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGA...........................................................................................................................................................2311.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCGA..........................................................................................................................................................2411.00110
............................................................................................................................................................................................................................CTTGTATCATCTAAAGCTT......................................................................................................................1911.00110
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGT...............................................................................................................................................................2011.00110
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGC............................................................................................................................................................2111.00110
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCT.......................................................................................................2311.00110
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................2211.00110
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGGG...........................................................................................................................................................2211.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2511.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGG...........................................................................................................................................................2311.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2411.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTG..............................................................................................................................................................2011.00101
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTT........................................................................................................2211.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2411.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGCG..........................................................................................................................................................2411.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAT.........................................................................................................................................................2511.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTTT.............................................................................................................................................................2111.00101
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTGA.............................................................................................................................................................2111.00101
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTA..............................................................................................................................................................1811.00110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................2311.00110
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGCGA..........................................................................................................................................................2320.50110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTTAG..............................................................................................................................................................20130.23303
droWil2
CAAC--------TTTTTTTATATTTTTTCCACA--------TTTT-CT---TCCTCCCCTCTTCA--CC-----------ATC--------TTTTCCTCTCCC--------------------------------------------------TCC--A-T-CATCATTTTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTGC-CAACGCACCCCA--AA----------------------------------AACA------------AA----ATAAAAT-GCAACASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21248832.5097665432451171127132745612540
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22233818.00676361234518245993339122141
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2423126.50625367125011491015
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................1821843.50368736832020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................232871.0017423557291360540
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................212802.5016053154324611
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................232775.50155156803667511
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................222652.5013051246163346
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................202541.50108312101552724
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................252296.50593225113381
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................222279.005587415740557
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................202226.00452152132259647
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................242220.00440611413181
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................212174.003482190014214
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................202138.5027713142210416
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................192106.5021316626579
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................242105.00210544179018
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................212100.5020117733144
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................222100.50201152193198
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................21277.50155214744241
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................19276.0015266264434
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25266.501330350980
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................22259.5011901010135
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23251.50103098050
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26246.50930390540
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21240.508110193436
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22239.00781650120
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................21235.507141014511
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22234.0068065030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23233.50674161451
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................24222.0044080360
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23220.50411550210
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19220.5041028292
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22218.50371240183
.........................................................................................................................................................................................................TTGTTT-TT---TGCACATTGTATATCATC..............................................................................................................................26218.5037040330
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24218.5037520300
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................22215.0030120261
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................19315.00450203211
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................22213.50270110160
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................18213.5027316053
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................24213.0026119141
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24212.5025022030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................24211.5023330170
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGG...............................................................................................................................................................19211.5023230000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................23210.0020015050
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2429.0018110160
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................1828.5017016010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................2428.0016040120
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2128.001608080
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2327.5015015000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................2327.001406071
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................2027.001407070
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................2236.6720100190
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................2326.5013000130
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................2026.0012012000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................1925.5011010010
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1925.001002071
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................1935.0015150000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................2525.001005050
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................2525.001003070
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................2224.00803050
....................................................................................................................................................................................CTTTGGTATTCTAGCTGT...............................................................................................................................................................1823.50707000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2223.50707000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2423.50704030
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2523.00603030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCAA..........................................................................................................................................................2423.00600060
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................2123.00606000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2022.50521200
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGA...........................................................................................................................................................2322.50510040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTG..............................................................................................................................................................2022.50530101
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................2222.50505000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAT.........................................................................................................................................................2522.50500041
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2322.00402020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAA..........................................................................................................................................................2422.00400040
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTAA........................................................................................................................................................2422.00400040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................2522.00401030
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2122.00400040
...................................................................................................................................................................................TCTTTGGTATTCTAGCTA................................................................................................................................................................1831.67541000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAG...........................................................................................................2121.50301002
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2421.50300030
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAA............................................................................................................1821.50300030
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGG............................................................................................................................................................2021.50330000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTAA........................................................................................................................................................2621.50300030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAC........................................................................................................................................................2621.50300030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTGA.............................................................................................................................................................2121.50301020
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2021.50301020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGAG..............................................................................................................................................................2021.50330000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGAT...........................................................................................................................................................1921.00201001
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGATT..........................................................................................................................................................2021.00200002
dp5
ATCTCT------CTCCC---------------A--------TTCG-CT---GTCTGTCGACTTCCATGC-----------ACT--------------------TTTTGT--------------------------------------------TCT-CC---TTTAAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAA----------------------------------CAACAACAGTAACTACAGTAATCAGA---AAACGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................211233608.00233608638141937177018067099696993440501223018132
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................221163371.001633714215932121641252969355117828582567462582
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................20112259.001225911210120617732840
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2115487.00548715264306015915138
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2314219.004219714789046381511172981139
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................2013457.0034571320628714472996574378157
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2412880.00288012177581102284513644
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2312540.002540214291103587371471143
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................2011876.0018760413701209346751014
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2111252.001252198921129217119712
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................2111012.00101206352904311502620
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191899.008991707209126882342
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221682.006824424171138922112369
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251593.00593047390120386100
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................221514.005140234166940083135
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................191451.0045143111578182421430
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................191429.00429087003008320236
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................241386.0038601071105271137764
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................221353.0035302665040163131
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................241253.002530102130210097812
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................221246.00246228606231003366
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................181216.0021601571020040511
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................231196.00196019410000100
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................211183.0018304420401551364
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................191182.00182018200000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................221153.00153015300000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................221130.001301280102211508
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................221118.00118011110000321
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18197.00976212110110325
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................21195.00950265032619151
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCC.........................................................................................................21191.009101819000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAA.............................................................................................................................................................20180.008008000000000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................22177.0077037301200700
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26174.0074058100001500
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25162.0062040304011400
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................18162.0062028000008521
.........................................................................................................................................................................................................TTGTTT-TT---TGCACATTGTATATCATC..............................................................................................................................26159.005902510501000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23153.0053020201010911
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................21153.005318320803100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22152.0052019112523217
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGT............................................................................................................................................................21145.004504100000310
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24144.004404400000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................20143.004303301104220
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................20143.0043015243000010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAG..........................................................................................................................................................24242.008400000008400
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................20142.004204020000000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23141.004103500000105
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................23132.003202400200600
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................23129.0029016120100000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................25128.002802210000500
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23127.002701300301901
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................24126.002602200000220
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................24124.002401500200502
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAT...........................................................................................................................................................20123.002309100001111
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTAA..........................................................................................................................................................24123.002307101001400
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................24121.002102000100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................24120.002001000001630
....................................................................................................................................................................................CTTTGGTATTCTAGCTGT...............................................................................................................................................................18119.001901900000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................22119.001901500000301
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................21118.001801800000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTA..............................................................................................................................................................18118.001801600001010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCTG........................................................................................................................................................26115.001500000001500
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................22115.00150720100410
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................23114.00140400100810
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTG.........................................................................................................................................................25114.00140800000420
...................................................................................................................................................................................TCTTTGGTATTCTAGCT.................................................................................................................................................................17114.00140000000716
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................21113.00130600000511
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................21111.00110700000400
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCC.........................................................................................................................................................25110.001000000000100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCT.........................................................................................................................................................25110.00100100000540
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................19110.00100200100322
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCC.......................................................................................................23110.00100341000020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24110.00100420100300
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................23110.00100800001100
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCA.......................................................................................................2319.0090400000500
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................2219.0090810000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTG...........................................................................................................................................................2319.0090000000810
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................1918.0080062000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2118.0080500000003
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGG............................................................................................................................................................2118.0080800000000
..........................................................................................................................................................................................TATTCTAGCTGTAGA............................................................................................................................................................1518.0080000000215
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGAT...........................................................................................................................................................1918.0080300000302
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATACC........................................................................................................................................................2618.0080000000350
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................1928.00160800003311
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2418.0080600100100
.......................................................................................................................................................................................TGGTATTCTAGCTGTAG.............................................................................................................................................................1717.0070000000601
...................................................................................................................................................................................TCTTTGGTATTCTAGC..................................................................................................................................................................1617.0070000000502
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTA..............................................................................................................................................................2117.0070300000400
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATCCC........................................................................................................................................................2617.0070000000070
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTT........................................................................................................2217.0070310000300
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2017.0070310000201
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................2216.0060210100200
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGC..........................................................................................................2116.0060420000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTT.........................................................................................................................................................2516.0060300000030
........................................................................................................................................................................................GGTATTCTAGCTGTAGA............................................................................................................................................................1716.0060000000015
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGC..........................................................................................................2216.0060320100000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCC.........................................................................................................2216.0060060000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTC.........................................................................................................................................................2516.0060100000140
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCC.........................................................................................................2316.0060060000000
.........................................................................................................................................................................................GTATTCTAGCTGTAGA............................................................................................................................................................1616.0060000000204
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2416.0060600000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................2225.50110010900100
.........................................................................................................................................................................................................................................AAGCTTTTATACCAAAGCTC........................................................................................................2015.0050300000200
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCA...........................................................................................................................................................2315.0050100100300
droPer2
ATCTCT------CTCCC---------------A--------TTCG-CT---GTCTGCCGCCTTCCATGC-----------ACT--------------------TTTTGT--------------------------------------------TCT-CC---TTTAAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-TT---TGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAACAACAGTAACT-------------------------------------ACAGTAATCAGA---AAACGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21176087.0076087270992946035032005344610574
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22122292.00222928941894310435246902151
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2012514.00251413247633019
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................1812194.002194218730130
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................2211167.0011671114438020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2411069.001069631329941410
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201810.0081058393304160228
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................211762.0076227562002
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................231556.005561682932081849
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................231482.0048216825441658
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221322.003221021137253441
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................211284.00284162151521224
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211226.0022602203210
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................191191.001919554711159
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191160.00160612110887
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251131.0013158619003
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................211103.001038462182
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................21188.0088214764712
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................22169.00691680000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................20163.00632493324
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................24139.003918413211
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................24137.003712214000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22134.00341330000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23134.00340340000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................24132.00323200000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22129.00291280000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................19128.00280280000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22128.00283931111
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................18127.00272221020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23122.00221551010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24121.00212001000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAA.............................................................................................................................................................20121.00210210000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26119.00192161000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22119.0019640027
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................22119.00190190000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25117.00170125000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................24113.00131012000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19113.0013191002
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21113.0013070015
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24113.00130130000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................1919.009900000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................2018.008080000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2317.007070000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTCT.............................................................................................................................................................2117.007002050
.........................................................................................................................................................................................................TTGTTT-TT---TGCACATTGTATATCATC..............................................................................................................................2617.007070000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2016.006030030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................2316.006060000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2416.006501000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2216.006411000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1916.006024000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2416.006200004
...................................................................................................................................................................................TCTTTGGTATTCTAGCTA................................................................................................................................................................1816.006600000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGG...............................................................................................................................................................1935.67171600010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTTAG..............................................................................................................................................................2055.40270270000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2115.005140000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAAC............................................................................................................................................................2214.004400000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................1814.004040000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................2014.004040000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTG..............................................................................................................................................................2014.004200020
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2113.003030000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGA...........................................................................................................................................................2313.003120000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................2513.003210000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................2213.003030000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCA...........................................................................................................................................................2313.003012000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................1962.50150150000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTT.........................................................................................................................................................2512.002020000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGG..........................................................................................................................................................2412.002200000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTACT............................................................................................................................................................2212.002000020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACAA.........................................................................................................................................................2512.002110000
droAna3
T---------------T------------------------TTTGGTTAACCT-----------------------TCTCTCCTC-ACGC---------------------------------------------------------------ACTCCCTTTCATTAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-AACAACAACAACAACA-------------------------------------ACAGGAATG------ATACASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22122707.002270765261066028757181161767
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21121059.0021059571337192620170032034104
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2312580.0025801812208173846
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2412257.0022572271252766624
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211688.0068823635102117
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................231620.0062021532233211514
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................211600.00600572261001
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................201519.00519497105142
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201412.004121355410399183
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211266.00266415111195166
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251240.002406011960100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................241205.002052113251001
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................221200.00200101891000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................201178.0017811752000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCC.........................................................................................................211176.0017601760000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221121.00121242524231510
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................241120.0012035455111212
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................211112.0011221241262623
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................201101.00101532821143
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................19198.00983022522109
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................21180.0080042681212
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23175.00751704000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22166.0066231191220
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................19161.00613666337
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................22161.0061251014741
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24142.00420348000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18138.00381321400
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25137.00372278000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22137.003741131612
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19136.003612211011
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22129.00292090000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................23127.00271250001
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................22127.00270270000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26126.00264148000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23124.00245105013
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................24123.00232174000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22121.00211740000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................24119.00191117000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23118.00181530000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGC..........................................................................................................22117.00170160010
.........................................................................................................................................................................................................TTGTTT-CA---CGCACATTGTATATCATC..............................................................................................................................26116.0016790000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................19111.00111100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................25110.0010091000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................21110.0010361000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCC.........................................................................................................23110.00100100000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................1819.009342000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2019.009500031
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................1917.007300022
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCA...........................................................................................................................................................2317.007015100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTCT.............................................................................................................................................................2117.007003400
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCC.........................................................................................................2217.007070000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................1917.007070000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................1817.007320011
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2417.007043000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2216.006123000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCAA..........................................................................................................................................................2425.5011029000
.........................................................................................................................................................................................................TTGTTT-CA---CGCACATTGTATATC.................................................................................................................................2315.005140000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2415.005131000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2015.005140000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1915.005011012
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATC............................................................................................................................................................2215.005102200
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATT............................................................................................................................................................2215.005201101
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2315.005410000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTAA..........................................................................................................................................................2415.005005000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGC..........................................................................................................2115.005050000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................2414.004400000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2314.004400000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2114.004130000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTGA.............................................................................................................................................................2113.003200001
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................2313.003201000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCTC........................................................................................................2313.003030000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTTT.............................................................................................................................................................2113.003111000
droBip1
TT---------------------------------------TTTGGT------------------------TCACTCTTCTCCTCACCGCACCTCCTTCT-----------------------------------------------------ACTTTTTT-CATTAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTTTCA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCACCAAACAACAACAACAACA-------------------------------------ACAAATATATAT---ATATGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTC-----------------------------------------------C------------T----------CCTCTCG-C-TCGC---------------------------------------------------------------ACTCTCTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CAC-ACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAAACAACGCACCAGC-------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------GTT---CT------------ATG--CTCGCATTTCTCCTC-TCGC---------------------------------------------------------------ACT--TCT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTACAGCTTAAATTGCTTAA-CAACGCACCAG---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C----------------------------------------------------------------------TCACGTTTTTCCTC-TCGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAG---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTCTCT-------TTTT------------------------TTCGGTT---TA------------ATG--CTCACATTTCTCCTC-TCGC---------------------------------------------------------------ACT--TTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGC--------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATTTC----------TT------------------------TTCGGTT---CC------------ATG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ACT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CACGACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAGC-T------------------------------------ACCA------------AC----CTCAGACAG--CCASizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------GTT---CT------------ATG--CTCACATTTCTCCTC-CTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACAAGC--------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAGCCC------ATTTT------------------------TTCGGTT---TT------------ATGCGCTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATAGCTTAAGCAACGCACCAG---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CATT--------TTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CATGATA----------------------TTTCACCCGCTTGCCAAA-------------------------------------TCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2213805244.00380524400302454771296025391564010510160400014202521494667122221954119762674102560245784823711135244222177812667184955646157189777248935415702153212124896113605522420973690000000000000000083208438664567562518333821183120919131384185815135967378227103413021435551714112311623693379318002103230646350850297061785292884421311417206414110215819173179128160134144164420612806279930812402140127211373815501974799462713019609221091807726161381817754254461107588442078347920873326061837386065443764966490455251128649290295106401898776040362768213912191116891325719589333927176125815903154743901375734561788471229804222167422341360427791461313032601825183208816022970247298666518083652613428281566773242401435270556280033402194983932359139652886270431247531162817464395988127852923643270627016662909185577591152261807011672575487451614615064981127181517569941809425952219431954646242174601472462124050592281072600101971339146789111181427328156801496843721609185018813161205124335168821202185524663334208881381514793713313056740187875735915490639614247358581772313313471173382131732581909700124159167031127715827476148642124897856937
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2112962311.0029623110000672415572017114581442553000806182737013213251146311653452545857112814812248131636761833197976634042760311992141421580417146404564356543391088588401030285000000000000000002196217517661794724732283574425622241149461632391721174537648826569625830190171129315360110726137017922123860105520133908676107571215833225345392525915613424347652738693510241731056190821633772915143745173026159623519716181644365723641313570911707717115021685698904842821011182509312961504821173538654651077161514222992297633742040109152427151116176668733180910726473354340125198195026225990561193964266202236532795205138555909239050943940925022280002617650667433443382653198313073662133594100203519013411315126657723514267194175563538619863427784942278623231357246373919516098323786038638885233854637969287729666140983771027203102873212673346489226056844277163609270860714893214913733574394424364516622383418436053266118917606252824912840975791456605134951118811175292721252885485475103637711561483654684119537156178113924317847957355463373826427330519790691807118135142021315335458116913796736037
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................241112058.0011205800000386100000000000391122800340000000572414552811612835196432276250883522561043718155000000000000000000000001816141201485526551500201030675140010601052827111122136401000020401032026612912835552534881727173417291064414324576152254194382592511723100070000076020037120105000000512793379551671136769427511543131056409644175003613183971890839713708381423138637645062600262200784217103104341058871477131429112540135743395517121243061317531471007732371437810083807719812628425836121644119483706180934661851111851764432304762142225711278713051133916115251398426963171914936395
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................23184249.00842490000323642353900110039781052500300027900208418212249844536851791381861771943053486242036900010450000000000000000067263549454811062396547973851223759629133291187631841302833631802934274326436631630101000513101218215976751201142232242371291402687515535915077520433958826829910518734610045441392333127043009112802312332823543601954334421795135202031361832615345671001310017110644114994210075294615871434199723552136164960046610632641180080602246534951411441696244628138235316439592381772783133465631451827927320281867262790327041037426610003841124133253202261161315141333791213328154628741120200030958204443437219818372061549262463266331198624132330375401346195826913410533466453113159193
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................22172194.007219400006320281034125110002002150000900062000077117109141475184121230222090001100000000000000000016038159991254711373228001111632914321895904017111472618257159543620052124811768504130332534264654013622612138546010000000010242000032029032172174213921332810146130000030929040131060400420070601000303100801510000012800000113300000010004716611231185284238354227410400000740208222201321020012211322115117151133341497372510276010327012080003111312401001318394122210102112000100024173317
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................23129933.0029933000001820510210000000718420160000000552429583634611073221649184766807841120000000000000000000000019720516716911644781491355202482413465602810121915183123713163353600600101000604404781218871120156396452465148161147278173154130176010014558623013600345162001700017050605002410212442342613551821132206594171005100863261142221312796861260137016131217572412810166201790035151130618311421318171763125327945820577112653840451917725876120169518482020475313252938216712517145372547512855307544981513112156816752211248125412791481210613312156021687945423192455884
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................20123576.00235760000400110100100000016287160971283119342214781714181815138614013112324336310314329154500300000000000000000003347333511842226548421332128211500151821471320526110224326281505017140108491516447459812181617381879884826838280827227556913146546131750133721731963022161473932198177190125598427213810541602401190246202001268518011100375427222112575542450720125939136325682610915600002024811148775131254172272131532481233471138514440971557316510122137082638372268282057372080352316664884355851421201445122844026146948189901238710262635655378702495673127397824633522388796781981021101522765635648
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................24122521.00225210000000000000000000000000000000000000001020000001010000000000000000000000000100000000010000000000000000000000000000000000000000000020000010000010000000002000000000000000000000000000000000100000000000000010000003005100333643270000156476758000000000000000000000000201100021000143639250000200000000005102010000202000100000000000010003010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22117508.001750800000000001000000000450111040000000331791571028335698164394202182411420000000000000000000000001312580100103220111141500000100270100010021218902000008020140061378101038163430616121496119482684814811691511002133483070000000010014300311419000012400010729000000304155310238971611111100001020055196498114843642930361115726661669264950410747937251203171167711210477719911051445719358423604696493762275359179943733275211452391196775112389131241353047121281911436370970
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22110466.0010466000000000000020000003500022600000001912164551538150168111815511980900000000000000000000069460001202002010102200000001521100100000000000200020000000104051326664476232421724423651211235131070800010400050101000010802211415000113390002213700400021141014270101714974582492751371073512700300000332701725122201821201153273181534918129057213958133913533828546654455105793993646134961687401236774120308154356477105321721652441931971313011216056209154107185201110617385326142132275661370
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2219739.00973900000000000011100000020522400000000271826341431411263036662581316281473100000000000000000000000242911301152129981150072415500679431211143502000606200000315014500311311322017101844837335383489287634867171301107021017180160035130501501143192324328500103930000023720001004101119716485322535691311354001010018902844553461921810135151138567661626952999788178611261634810813685610441985116264716103721417111210233410149161054260452603124222785106175691634171997013631117142910301625523797280
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................2519593.00959300000013000000000000926200000000000182546013114251123754032276293000000000000000000000002223045984320001000007000002000031500030021010000000000000001103110054242266127679628119194551112181700000000000200200010100000000000191148790006104290000016759801000010021271543055205912313370000000009415000000003100200000201114244111392114622680732312354717651030000028500051108244117206020111372564440120001103012036861461000110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2418669.0086690000001000010000000013700000000000213152191652514103322271717111580000000000000000000000023370141412413010100000600000000123502030040020002010000010431014119110267568984829553825301192421191210000004022020003000000000000022012400103124813226132941000100100146425188629237030111995524181280100239200011081215100040110121003172060104331612473411861258331591103001101100001831664373020001114727791025061330000934312436234410
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................2118302.0083020000000000000110000042813003002270920072734352446143553241939133734664951150000000000000000000000029530325020103061385510112141000147015262849693231360300000000111770021001013276454691136785050462912111718000002815543721272409103098277213040208136062421120003133300000851000000114410116141424205786783081154628000174000012161513611213601465561060131725121413210529803720171260383391384531138155116111478141619320309368362211100174781323512251543071002302661310715200
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................2017755.00775500000000000000000000614201090100000626215210161021242211503034252325651200000000000000000000000161610140000414300000000000000001220000000000000000000001000012971208506758511297309939928828129142283911417096101301000648100000013041153192101121000201338000000212432133963671155106524614972080000167152219189213819361266161064715323804417414213105228139171324473255344116291192037752310212544517539138227161759151381169265913025376666278012244540211549218919311
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................2117334.007334000011000100010000003485601084000000001726124610191234191534342811192824510000000000000000000000065412031112055104002422001000003710100001040000100013128160040011210761531442736106121103106101511616163512442151430511221022062026050123022610307215181881800307200000055228003011311236314136171311717221301001950451874612845202712716107274226228431945311403592713573321485851002026717766203591931401712813537921538992476633710872192735241411153142614365117325798161019811130301350
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2115332.005332000066151000010010000271100000000003419834157121217761260000000000000000000000000621212262900001802131100051101353234002042000111010020010012433623334026151028572101520600100400200419070022020305014020810251814400911280000092900110061136133448119205410139139000101005506302233204611271302638722713167361015755913845114054465228115562316261521751364195992761181302318161649211442011214213432284189291413522116142671260
.........................................................................................................................................................................................................TTGTTT-CA---CGCACATTGTATATCATC..............................................................................................................................2615260.005260000000000000000000000010000010000001302003172202224121600000000000000000000000815680200112001000102000220040500001300200000010000100419300112023022024122732789000000000000010000000011008020000010200400000000113100000000011400864643201336520290405143113616314000000020152201306004514002122020450010000010000021000064000072005050030031901000001200001000413100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2415077.00507700000100000100000000322000300023000242315712708511661413100031200000000000000000151771700000214010002117000000165102020004000000101102101154014100214328111741213020512133712132604200854250100140203075000120467195411000152781321002232500000017307141651138943811148051194400611800122207111274316632321703781315353192517131310521576921256267582171925191424535590201438315551100147511285118128651048025452937178012264631029129282215471311327360
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................2215064.0050640000011001001000100031000010000000169342120932733422864191388000000000000000000000003424040416420310030630059001558043510100100000000001100664665190216162082120672106181412000011104306010210011200120053262550040030000019530001000313921311613281085613223000098020081522149305105299176547131323369172337136411635911126791517100407610143182230353221286727152218815686261115914570247016121740191448522682413142211551530
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2114924.00492400000001000000000000082000410000000317242121483813620162476000020000000000000000001025814010505251040111410081003427031100180010001010100002027101813101425222012135233383453116381842100304004211000116110205000430315111000122100000015220000009183117321366239191207287242010000003100033220102663630643131191811561011212112525482638238059340524271222177111115819433117117005231816315040125613101435161744154111211815241317412
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2013672.003672000000000002000000000502001200000016431033210521576320000000000000000000000044330402312302012112300134040010000100001000000000000000305305031381511106751154324101115002110815046401335031000401106179520030215000001600100076355166748177847446790000000010110140120211112303105257218371041110544274315654263822232301159543992114415582280291762317113131491047851731175782498826211214447406
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................1913578.003578000000000000000001008134000421891010014313561251443048533150000000000000000000000005262010020010000001100020100010020110000000000000000001200000411420435316328101983132211510240110115301100540141114130100509144951450080224000000100030003826641291242483724183050060000540030241123573344574113891314061718193170488412681822528182619412899101324864184951164081357318655796618611463051219567518918252014297921150
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................1913471.00347100000000000000000000440111040323700710421156250442653000020000000000000000000172519130005001410120015200401203462000101004401012105124151416622200003212570215697973464502017182310512320420272336212302010115328119500707220002117002100911418111531255731351722197210278000083343421617206383532144591260144168215318619421712363145314480319831172611281251076122131820152453253523137374533587161327331931125259221519327252652
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................2113018.0030180000000000000200000000000000000000010041120010323221110100000000000000000000000100100000000010000100002000100000000101000000001000001000301031489678175642794180000060100001305000201001000500031296000201500000270000004000013272422224219264410000000100001061002201063021033583191358009550810729151275398341583296331135211343013527160561627101112421813887144751197303214796931721140
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................2312687.00268700000000000000000000240000000000001576211655517011124960000000000000000000000009105901402100001000010001100103002000001000000000000000010322220014191032178722138181130000200132100100010000010010301015270002110111039121000000002921135944303556873310131111836700200120340000230013050085591189147830341954218536208341570831410107301105581344926121483846408156131724170013594652228100
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2112384.0023840000000000000000000002210060000000131104118200573474300000000000000000000000887300000003000001021000020001002000000010000001000010000012140133694195108358632888131004000100002102000200202041411000001100000660000001511480445233094814531122800222004311014320030201411431615502671813454231552913919135352039582151231156221922039226921141420305132179431111827181133211133431621359130
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATATC........................................................................................................................................................2612159.00215900000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532626000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................1912091.00209100000000000000000000116000010000000011032122102225513100000000000000000000000895800000012000000000000000001300100000000000000010100013302271011616661317141105161214500000000110200000510000000100320010002012401000120000001311317610461350140010000001000000000011001112003207014264930794793317525205262221483030001410140178110321511316442465391116311600010631417620
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2511524.0015240000001210000000000025000000000000112451000141005110230000000000000000000000000010410748000000000400000000110000010020000000000000001000501202323061293130300300000000000000000000000000000100115013000110200000254300000000012124121105254229920000100020000001000000000001002010010010004316526714321014580011000101810004163318410000005235541200200111001074412000010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2611192.001192000000010000000000000340000000000002272001121205200000000000000000000000000000000530040000000001000007000001000100900000000000000000020000041420254531012013200000000000000000000000000000000001201300003060001017420000000005010265114316117570000000000000000000000000000010001000000004110817653816942100010000030000492716360000104522601000001000000031428000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................2311136.001136000000000000000000002010000000000003124612012644422330000000000000000000000036220300100000000100000000000000010000401000000100001208732244046921626415091350010000010010000000000104000010016490000004100208160020000001612111631912243174600000000100110210000001100010130352441331016501129136312640411400001111112946172807122265047734320942241060314854115640
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................241950.00950000000000000000000001110000000000000031011200204120010000000000000000000000000000023000000000000000000000000000000000000000000000000000021001284312020111120000000000000000000000000000000001030000000000001900000000001103292110403924560000000001011100000000000000001000100211002115511691714143800000000014000052715371701000021514101100210100003632000200
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTT........................................................................................................221900.0090000000020010100000000000000000000000010000000000000000000000000000000000000002372311921650200012320020000000000162590102000100000000000000000000000011000000000000000000000100010000030000020000000000000000000000000000000000100100530001100000000000010000000000000000000000000001010202000001000000000100000000000100000000000000000000000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................181839.008390000000000000000000033000001000000001001010000100100000000000000000000000000222000000000000000000000000002000000000000000000000000212000000213401606111120200000000000001010344000000063001111300000030000001000000010329502000033000000001000001200000000001001001108300510222061588879969212001100050014121711402243822134427321612702101321207010
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................181634.0063400000000000000000000411000000000000000000011000100004000000000000000000000000537100000000000000000000000000000000000000000000000000010000020041543725402470121000000001000000100000000001003801000000000040240000000012523011000100001000010000000000000011001000001053202003121935024026101000010022002152421020026154202100000300000000003200
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................241597.005970000000000000000000002000000000000000200111320112176020000000000000000000000000010010000000000000000000000000000000000010000000000000100000002710390301001310000000000000000000000000000000010500010000000000020000000003000018735420000043100000010001000020000001010100010000101788124111436170000101004100015410383110000166700010000100001102003020
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................201521.0052100000000010000000000010000000000002300211000103000014000000000000000000000000687080390006210100000011000010011513140010000000000000001000330000005210012102002200000000200000000014050002000000110000000000100000000000000010100191900020111010000000000001000001000300000001041111101121326050000500001000200100011110001200100000000010000105030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................181491.004910000000000000000000034000000101010011400000010100000100000000000000000000000713390000010000000102000000001020000000001000000000200045766011024102002120111101101000030000402000001103020208302210100001000000230000000031032122365211222221000100200000000011021001161630106324711236231404209231235001364311120040313100011000000000202618002
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................221375.003750000000000000000000000100010000000000101120011100021300000000000000000000000121515600000000001000000000000111000020000000000000000000010000000001002311101001001000120000000000000000000000000000120100000000044000000000321010691610842800000000000001000010000000000000000011000041861122211300001000000000039080301122189113100200100000100104018
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAT.........................................................................................................................................................251351.0035100000000000000000000000000000000000000000100000000001000000000000000000000000001010000000000000000000000000000010000000000000000000000001002400000000000200000000000000010000000000000000100100000100000000000000000001003463438413728360000285001000000000000000000000000002010011162115180010000100000002100000000000200000010000100020000300
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................221324.0032400000000000000000000010100200000000121142111020105201000000000000000000000005135000001010000000000000000010020000000000000000000000000000000110013120030000000000000001010000000002100000500010000000000000000000000022002048540103460080000100101130000000010000010210041111320301260110011500000000103200030003211100350101200000000003000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCA.......................................................................................................231319.003190000000100000100000000000000000000000111000001000000000000000000000000000000493632270224140543000001010000180114272811021001100000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000230106100000000000000000000000000000000000000000010003000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................192312.00624000000000000000000000100000000000001000012100002010000000000000000000000000001010000000000000100000000000000000001000000000001000000000000004361063623020000010010002500101020243102000303005167120002006000007270000006142403123166143411000000000200001000000000000001000002002000072113020842861375113101400120200010202510211471017943322726106129134620
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................241300.003000000000000000000000002000000000000001000010000012001000000000000000000000000021000000100000000001000000000000000000000000000000000000300100123000102202000000000000000000000000000100000001000000001200000391000000003100613595102340000000001000000000012000000000000010011001125162261811110000000021000261211000000037101010000300001001101010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTAA..........................................................................................................................................................241298.00298000000000000000000000000000000000001011000010401310010000000000000000000000000000000010000000000000000000000000000100000000000000000100001001312571150402000000000000000100000000000100000001200000001000000150000000000000000011030000000000010000000000100001000000000110006693194641130001000011000001734100000113000000000000011200001000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................221296.00296000000000000000000001000000000000002020100011403000100000000000000000000000000000000000000000000000000000000000000000000000000000000003000059715311110000000000000000000000000000000000000001010000000000000120000000000100202010020000000000000000000000000000000001010000001013738412030000000001100002715000000332000000010000001501000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................241290.002900000000000000000000000100000000000000030000200002000000000000000000000000000000002000200000000020000000000000010000000000000000000024000110011100010002020000000000000000000000000000000001301000000000000316000000000310035025035000000000000000000000000000000101100000000831918939314000001000600003573600100001312001000110210102214100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCAA..........................................................................................................................................................242288.505770000000000000000000000000000000000001100000002015100100000000000000000000000000000000000000000000000000000000000000000000000000000011000200375931010001001000000000000000000000000000000000011000000000000160000000000000100000070000000010000000000000100000000001010010112012775381312180000000014000045844215000000024000000000000000301002000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................222288.005760000000000000000000010010000000000000001010100021001010000000000000000000000011300100000100000001000000000000000000001000020000001000100001017701365540100000000000000120100000000000000100001310000100000018000000110010000000000000000004104113410002010450200953901188852093252033517500100312321261013518624121111010161921522052019006001101012000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................221282.002820000000000000000000010000000000000000000000000011000000000000000000000000000413100050000000000000000000000000000000000000000000000000000000000000010011010000000000000000000000000000000001100000000000000311000000000021000000000000013462000000000000000000000000000000000000325647290010000000000100101000001000010000010000000000010000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................231277.00277000000000000000000000000002000000000331202200202110000000000000000000000000000320000000000000100000000000000000000000000000000000000000000000300120020010100000000020000000000000020000002010000000020000040000000000010032343520037400000001011000120000100200000010000071100019575192102010100010000000310000019011100000000000000000100000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................221275.00275000000410001000000000000000000000000000001100001000010000000000000000000000043453542080239020010000210001105514153111200700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000100000140204000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTG.........................................................................................................................................................251270.00270000000000000000000000210000000000001000400011002310100007540000000000000000000000000020000000000000000000000000000000000000000000020000300209381121300440200000000000000000000001201000000021206000101000004000120000121003033422000000000005000000000000000000000000000000000111200000101000300100223401200008510200000000000002204000010
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................191251.00251000000000000000000000000000000000010120000000000010100000000000000000000000015115120206420600000011000242085101432020011000000000000200020000010201601100000070000001060000000000101000100402001100000001000000000000000005000011301021101000000000001000110220112000000102000011041304030000401001000100300000022000000000000000100000049000
droSim2
TGTACTCGCCCA-------------------CATTTTTTTTTTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-----------------------------------------------------------------------CCASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2211354901.001354901162797162102358228440038133229384834374315324626288408924591205131322
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................211781402.007814023128592387171480100020877118052115718596408949171565171100123
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................241175737.001757378396794326570026579205827848336034262644917034001
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................23145225.0045225100371789131400847570131638393853706919098011
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................20137788.003778816057167960096897753951658324451181130215
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................25123262.002326224460496002169169611182679243514111000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................22120268.0020268188898117137140040386518711600000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18114763.00147633136105792891003782842111112480079527
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................23110627.00106272101111120347001845165029101983371293318000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2418570.0085700417045002286173429521332321320000
...................................................................................................................................................................................TCTTTGGTATTCTAG...................................................................................................................................................................1515120.00512000000012047417954051972011001
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................2012386.0023861024610200889896234127501884000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2112342.0023421646034002552531033620422221000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................2512295.0022950027600201151109080312500000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................1912169.0021691343912713004503683802144161417213
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2112121.00212191271805006140905923410100
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2211939.0019394710161400708581229147322000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2611660.001660001320001381278634935100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................2311509.0015091811251160037026835718328601000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2211218.00121828217618638009370148134542719000
...................................................................................................................................................................................TCTTTGGTATTCTAGCT.................................................................................................................................................................1711048.00104800000012495113644530043128136
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................1911033.001033001480092754254743320000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2411027.00102733278313002732282501018308000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................201839.008399113607006049523310500000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................231735.007351035290014712323513425411000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................211698.006981954232760044511499100000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................211681.0068160212002222281186715101000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191672.00672100623002412456437281413000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................241619.00619302513007079132675324000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................241607.00607102084003845210980300000
........................................................................................................................................................................................GGTATTCTAGCTGTAGA............................................................................................................................................................171598.00598000000652230535000000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................181579.0057900010022103131484000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................221558.005583413431007869178107211301000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................241536.005360199110085891686710600000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................221446.004461001700136530846734000
.........................................................................................................................................................................................GTATTCTAGCTGTAGA............................................................................................................................................................161393.003930000001273527312000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211359.003598424800062662114522701000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................231288.00288000238005623133000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................181282.0028220850036271917165300000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................221236.002360041200583978367200000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211227.002271133800321613141900000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................251217.002170039200332569432220000
..........................................................................................................................................................................................TATTCTAGCTGTAGA............................................................................................................................................................152214.5042900000079621882575000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................211183.00183001600695824231010000
........................................................................................................................................................................................GGTATTCTAGCTGTAG.............................................................................................................................................................161176.001760000002334164000000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAG.............................................................................................................................................................171157.0015700000054158125000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................221157.0015700312900331090000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................221152.001520019000523624173100000
...................................................................................................................................................................................TCTTTGGTATTCTAGC..................................................................................................................................................................161150.0015000000034351090014318
.........................................................................................................................................................................................GTATTCTAGCTGTAG.............................................................................................................................................................151119.001190000004167101000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................241114.001142015100242131137000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................221102.00102315000012090000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................25180.00800050005826323001000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACAA.........................................................................................................................................................25175.00750010007634234000000
...........................................................................................................................................................................................................................................GCTTTTATACCAAAGCTC........................................................................................................18173.0073000000000073000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGG...............................................................................................................................................................19172.00722174200000002000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................23164.0064001000251810100000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................24161.006100100025121193000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................23161.006100020012102692000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTA..............................................................................................................................................................18161.006100000022206211000000
............................................................................................................................................................................................................................................CTTTTATACCAAAGCTC........................................................................................................17161.0061000000000061000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAT.........................................................................................................................................................25159.00590000001992190010000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTAA..........................................................................................................................................................24158.00580002005425162400000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................22257.501151021001000109100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTGA.............................................................................................................................................................21156.0056112000633832000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22155.0055003220089625000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................21251.5010300310069111657000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTA..............................................................................................................................................................17150.0050000000540140000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAACA.........................................................................................................................................................25145.00450011000451960000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................24142.00420070009111122000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24140.0040000320020230100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTG..............................................................................................................................................................20138.0038128000304317000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTA.........................................................................................................................................................25138.0038000000129980000000
.............................................................................................................................................................................................................................................TTTTATACCAAAGCTC........................................................................................................16135.0035000000000035000000
...........................................................................................................................................................................................................................................GCTTTTATACCAAAGCT.........................................................................................................17135.0035000000000035000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAT...........................................................................................................................................................20131.003100000056857000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................19230.50613032700000000010000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAA..........................................................................................................................................................24130.0030001100121182400000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGAA...........................................................................................................................................................20130.003000100063866000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................23127.0027000000371160000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATTAAA.......................................................................................................................................................25127.0027000000471240000000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................22126.0026000110043611000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................23125.002521400014741100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAC.........................................................................................................................................................25124.002400400096320000000
............................................................................................................................................................................................................................................CTTTTATACCAAAGCT.........................................................................................................16124.0024000000000024000000
droSec2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------T-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CA---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC-----------------------------------------------------------------------CCASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22141461.0041461256263162103502323
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21128410.00284109292621667976105
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2112150.00215021311171
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2411311.00131134547808111
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................231828.00828634917411
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................201760.00760754042
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................231612.006124492811223
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201364.00364187753567
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................201178.00178118153411
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251117.00117522594
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211117.00117106524
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221106.001065025922
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................21197.0097730177
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................19186.00862743025
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................21173.007354487
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................24168.0068343247
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................19166.00663411021
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................22162.006254251
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................24158.005819161211
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22158.005859377
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22146.004646000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................22143.0043154204
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22134.003433010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23133.003324063
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19129.002927110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23123.002315080
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23120.002019010
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23118.001818000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................21115.00156513
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25115.00156072
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18115.00158034
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................19214.502986114
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21114.001410202
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22112.00122613
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................18111.001111000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGG............................................................................................................................................................21111.001111000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24111.001110100
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2219.0099000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................1919.0099000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2218.0082051
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................1818.0085030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................2617.0071060
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2417.0071150
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................2226.001210110
.........................................................................................................................................................................................................TTGTTT-CA---CGCACATTGTATATCATC..............................................................................................................................2616.0061041
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2016.0062301
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................2416.0063030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2416.0063030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATT............................................................................................................................................................2216.0065100
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2015.0055000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2214.0042020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTTAG..............................................................................................................................................................2093.563226411
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTGA.............................................................................................................................................................2113.0032100
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCG.........................................................................................................2113.0033000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................2013.0033000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2113.0033000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................2113.0033000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGTA...........................................................................................................................................................2313.0031101
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAT.........................................................................................................................................................2513.0031020
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................2013.0032010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACAA.........................................................................................................................................................2513.0032010
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTT..............................................................................................................................................................1912.0022000
.........................................................................................................................................................................................................TTGTTT-CA---CGCACATTGTAT....................................................................................................................................2012.0020002
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................2512.0021010
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAT.............................................................................................................................................................2012.0022000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2312.0022000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2412.0020110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATG..........................................................................................................................................................2412.0021010
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1912.0020020
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGA...............................................................................................................................................................1912.0020011
droYak3
TCGCCC-----ACTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTC-TTGC---------------------------------------------------------------ACT--ATT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CG---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAGCGCACCAAC----------------------------------------CA------------A--------AAACAG--CCASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22148038.00480384624209311616833714637881203316480
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21136330.0036330132931123627743222961165331830008
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2312096.0020962660113975021270100
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2111902.001902218583820110000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2311309.001309100674459331215150010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................1811131.0011311051345002061230
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2411010.0010101153626916641090005
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................201980.009803968420030000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................221791.007916876816136100000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211659.00659019045652330000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................221409.00409020719730000110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201370.003704814211515712231007
...................................................................................................................................................................................TCTTTGGTATTCTAGCT.................................................................................................................................................................171235.0023500000002422090
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221197.001978059218217100000
.........................................................................................................................................................................................................TTGTTT-CG---CGCACATTGTATATCATC..............................................................................................................................261190.0019058155100000021
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................241158.0015807662161120000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................201149.00149210023122280000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................211134.001349303421310000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCC.........................................................................................................211132.001320013200000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................231125.001255910640100000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251110.001101781870110004
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211108.001081292355540000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................191102.0010236251714762130
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................221102.00102411501232020000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................19188.00880614102560000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................24172.007220182431330000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................22165.0065062300000000
...................................................................................................................................................................................TCTTTGGTATTCTAGC..................................................................................................................................................................16162.0062000000060560
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................21157.00572221583160000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22154.0054051300000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19142.0042032720100000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23140.0040036220000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22137.0037942011020000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................20135.0035072800000000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23126.0026026000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23123.0023110611130000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................18122.0022119200000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21120.002028810100000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................23118.0018011600100000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................21118.0018016200000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................24117.0017201410000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25117.0017010430000000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................20115.0015013200000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................24115.001513470000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................19115.0015014100000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTG.........................................................................................................................................................25114.0014020001000011
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCT.........................................................................................................22113.0013001300000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26111.0011010100000000
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................18111.0011010100000000
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGC..........................................................................................................22110.0010001000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................2419.00904410000000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2219.00909000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGCA...........................................................................................................................................................2317.00700700000000
.........................................................................................................................................................................................................TTGTTT-CG---CGCACATTGTATATC.................................................................................................................................2317.00740300000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGC...............................................................................................................................................................1926.501350800000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGA...........................................................................................................................................................2316.00603200010000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAC.........................................................................................................................................................2516.00600510000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTTT.............................................................................................................................................................2116.00600010410000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGGAA..........................................................................................................................................................2415.00501040000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2315.00505000000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2315.00505000000000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCT.......................................................................................................2315.00502300000000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1915.00502000000030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGG...............................................................................................................................................................1914.00440000000000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTA........................................................................................................2214.00401300000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGT............................................................................................................................................................2114.00403000100000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2114.00403100000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAGA..........................................................................................................................................................2414.00401300000000
.........................................................................................................................................................................................................TTGTTT-CG---CGCACATTGTAT....................................................................................................................................2014.00411101000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATC..........................................................................................................................................................2414.00400400000000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTCC.......................................................................................................2314.00400400000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2214.00400130000000
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2113.00302100000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2213.00303000000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATT............................................................................................................................................................2213.00301010100000
......................................................................................................................................................................................................................................CTAAAGCTTTTATACCAAAGCC.........................................................................................................2213.00300300000000
droEre2
TCGCCC------TTTTT------------------------TTCGGTT---CT------------TTG--CTCACATTTCTCCTA-TTGC---------------------------------------------------------------ACC--TTT-TATCAT-TTTTGCTGTTTCTTTGGTATTCTAGCTGTAGATTGTTT-CG---CGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGCTTAA-CAACGCACCAAC------------------------------------------------------------------------CASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................21156043.00560432603821117131167124831441912
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................22148074.0048074360781030737103557313333130
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGA............................................................................................................................................................2112997.0029972981113470
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................2312659.002659116328161289471304
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAG.............................................................................................................................................................2012103.002103206104220160
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2411207.00120710745338174921
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................2311016.00101685651526241341
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTA..............................................................................................................................................................201675.006753988123157970
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAT.............................................................................................................................................................211459.004592641525817670
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCT.........................................................................................................211288.0028820553146190
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................251246.00246238001016
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGA............................................................................................................................................................201191.0019116132212110
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAG.............................................................................................................................................................191174.001748909439330
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................241141.0014144561273127
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGT............................................................................................................................................................221139.0013969210432220
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAA.............................................................................................................................................................211130.001309411715120
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................221126.001261050000021
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGT...............................................................................................................................................................191124.001245724338200
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCTC........................................................................................................221117.00117813211110
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................23198.009898000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................24193.009378208230
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAA...........................................................................................................................................................22184.008481000012
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTG.........................................................................................................................................................25145.0045903031812
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAC...........................................................................................................................................................23135.0035134001116
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................22134.0034902012110
......................................................................................................................................................................................TTGGTATTCTAGCTGTAGA............................................................................................................................................................19132.003225101230
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGG............................................................................................................................................................22132.003222105130
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAC.............................................................................................................................................................21130.003015300390
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAG...........................................................................................................................................................23129.002925001030
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGC............................................................................................................................................................22125.002581210130
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAGA............................................................................................................................................................23125.002525000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTGT........................................................................................................................................................26123.002350001017
......................................................................................................................................................................................TTGGTATTCTAGCTGTAG.............................................................................................................................................................18122.002213011430
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGAAAA.........................................................................................................................................................24122.002222000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAA.........................................................................................................................................................25121.002121000000
.........................................................................................................................................................................................................TTGTTT-CG---CGCACATTGTATATCATC..............................................................................................................................26121.00215902122
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATAAA........................................................................................................................................................26121.002120100000
..................................................................................................................................................................................TTCTTTGGTATTCTAGCTGTAG.............................................................................................................................................................22121.002121000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAT...........................................................................................................................................................21120.002012300410
...................................................................................................................................................................................TCTTTGGTATTCTAGCTG................................................................................................................................................................18117.001742001100
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGG............................................................................................................................................................21115.001515000000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGCC.........................................................................................................21115.001501500000
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAGC..........................................................................................................20115.00157400040
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTA..............................................................................................................................................................19114.001414000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTAG...............................................................................................................................................................19311.6735150009110
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTGTT.......................................................................................................................................................27111.00115000105
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAA.............................................................................................................................................................2019.0099000000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCT.........................................................................................................2019.0099000000
........................................................................................................................................................................................................................................AAAGCTTTTATACCAAAGCTC........................................................................................................2118.0088000000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2318.0088000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGATTT.........................................................................................................................................................2517.0072010103
...................................................................................................................................................................................TCTTTGGTATTCTAGCTTAG..............................................................................................................................................................2096.7861420001180
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAC..........................................................................................................................................................2416.0065000010
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATT............................................................................................................................................................2216.0064010100
.......................................................................................................................................................................................TGGTATTCTAGCTGTAGA............................................................................................................................................................1816.0065000100
.......................................................................................................................................................................................................................................TAAAGCTTTTATACCAAAG...........................................................................................................1915.0055000000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGAAA..........................................................................................................................................................2215.0054001000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGT...............................................................................................................................................................1815.0055000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGACA..........................................................................................................................................................2415.0054000001
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTT..............................................................................................................................................................2015.0053000110
.........................................................................................................................................................................................................TTGTTT-CG---CGCACATTGTATATC.................................................................................................................................2315.0050011120
.....................................................................................................................................................................................................................................TCTAAAGCTTTTATACCAAAGCT.........................................................................................................2315.0052300000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAT.............................................................................................................................................................2014.0044000000
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTAGAAG..........................................................................................................................................................2414.0042001100
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTAGATA..........................................................................................................................................................2213.0032100000
.....................................................................................................................................................................................TTTGGTATTCTAGCTGTA..............................................................................................................................................................1813.0032001000
....................................................................................................................................................................................CTTTGGTATTCTAGCTGTAGATT..........................................................................................................................................................2313.0032000100
...................................................................................................................................................................................TCTTTGGTATTCTAGCTGTATG............................................................................................................................................................2223.0060003030
..........................................................................................................................................................................................................TGTTT-CG---CGCACATTGTATATCATC..............................................................................................................................2513.0032100000

Generated: 10/20/2015 at 07:37 PM