ID:

dmo-mir-79

 Coordinate:

scaffold_6500:7202139-7202214 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.6 -36.4 -36.2

Flybase annnotation

intron [Dmoj\GI17268-in]; utr5 [utr5_plus_2210]; pre_miRNA [Dmoj\mir-79-RM]; miRNA [Dmoj\miR-79-RA]

No Repeatable elements found

Sense Strand Reads

ACAAGTGCAAGTGTCTTGTAATGTAAACGTGTTTTTAAATATTCGCCCCATTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCTCTGTGGCCAAACCCCAGCGAACTTGTGAAATAATCGAACATGCATGTACAT

*******************************************.(((.((..((((.((((((((...(((((((.(((((..............))))).)))))))...)))))))).))))..)).)))...***************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V056

head

 V110

male body		 V049

head

 V041

embryo
..................................................................................................TAAAGCTAGATTACCAAAGCAT........................................................ 22 0 1 19266.00 19266 8086 4221 2761 2492 977 729
.................................................................................................ATAAAGCTAGATTACCAAAGCAT........................................................ 23 0 1 12976.00 12976 5940 2607 2044 1305 682 398
..................................................................................................TAAAGCTAGATTACCAAAGCA......................................................... 21 0 1 816.00 816 533 151 74 17 31 10
..................................................................................................TAAAGCTAGATTACCAAAGCAC........................................................ 22 1 1 557.00 557 88 462 4 2 0 1
..........................................................GCTTTGGCGCTTTAGCTGTATGA............................................................................................... 23 0 1 515.00 515 32 465 3 2 4 9
..........................................................GCTTTGGCGCTTTAGCTGTATG................................................................................................ 22 0 1 495.00 495 15 321 14 20 9 116
.................................................................................................ATAAAGCTAGATTACCAAAGCA......................................................... 22 0 1 485.00 485 320 86 48 9 17 5
...................................................................................................AAAGCTAGATTACCAAAGCAT........................................................ 21 0 1 441.00 441 277 62 51 23 25 3
..................................................................................................TAAAGCTAGATTACCAAAGC.......................................................... 20 0 1 433.00 433 109 252 28 17 13 14
...................................................................................................AAAGCTAGATTACCAAAGCATT....................................................... 22 0 1 407.00 407 152 223 18 3 7 4
..................................................................................................TAAAGCTAGATTACCAAAGCATT....................................................... 23 0 1 399.00 399 149 217 5 10 5 13
.................................................................................................AGAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 364.00 364 0 359 3 0 2 0
.................................................................................................ATAAAGCTAGATTACCAAAGCAC........................................................ 23 1 1 249.00 249 29 211 8 1 0 0
..................................................................................................TGAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 194.00 194 4 188 1 0 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATC....................................................... 23 1 1 181.00 181 95 68 6 11 1 0
.................................................................................................ATAAAGCTGGATTACCAAAGCAT........................................................ 23 1 1 167.00 167 24 0 106 5 32 0
.................................................................................................ATAAAGCTAGATTACCAAAGC.......................................................... 21 0 1 154.00 154 56 91 4 2 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATA....................................................... 23 1 1 151.00 151 78 67 2 1 0 3
..................................................................................................TAAAGCTGGATTACCAAAGCAT........................................................ 22 1 1 146.00 146 22 1 87 8 28 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATT....................................................... 24 0 1 114.00 114 30 77 4 0 2 1
.................................................................................................ATAAAGCTAGATTACCAAAGCATC....................................................... 24 1 1 107.00 107 54 39 2 11 1 0
..................................................................................................TAATGCTAGATTACCAAAGCAT........................................................ 22 1 1 100.00 100 0 95 4 0 0 1
.................................................................................................CTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 76.00 76 10 62 2 2 0 0
.................................................................................................ATATAGCTAGATTACCAAAGCAT........................................................ 23 1 1 74.00 74 2 70 2 0 0 0
..................................................................................................TAAAGCTAGATTACCAAACCAT........................................................ 22 1 1 73.00 73 3 61 5 3 0 1
.................................................................................................ATAAAGCTAGATTACCAAAGCATA....................................................... 24 1 1 69.00 69 28 38 1 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAG........................................................... 19 0 1 67.00 67 50 3 6 4 4 0
.................................................................................................ATAAAGCTAGATTACCAAAG........................................................... 20 0 1 61.00 61 32 5 13 9 2 0
..................................................................................................TAAAGCTAGATGACCAAAGCAT........................................................ 22 1 1 58.00 58 47 0 8 0 2 1
..................................................................................................TAAAGCTAGATTACCAAAGCAA........................................................ 22 1 1 57.00 57 35 18 2 1 0 1
..........................................................GCTTTGGCGCTTTAGCTGTA.................................................................................................. 20 0 1 49.00 49 1 44 0 1 0 3
..................................................................................................TAAACCTAGATTACCAAAGCAT........................................................ 22 1 1 43.00 43 5 34 1 3 0 0
................................................................................................CATAAAGCTAGATTACCAAAGCAT........................................................ 24 0 1 42.00 42 11 30 1 0 0 0
.................................................................................................TTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 38.00 38 15 21 2 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCAA........................................................ 23 1 1 36.00 36 27 8 0 1 0 0
..........................................................GCTTTGGCGCTTTAGCTGTAT................................................................................................. 21 0 1 35.00 35 3 30 0 1 1 0
...................................................................................................AAAGCTAGATTACCAAAGCATC....................................................... 22 1 1 35.00 35 9 25 1 0 0 0
..................................................................................................TAAAGCTAGATTACAAAAGCAT........................................................ 22 1 1 34.00 34 0 23 5 3 3 0
.................................................................................................ATAAATCTAGATTACCAAAGCAT........................................................ 23 1 1 33.00 33 5 22 0 3 1 2
...................................................................................................AAAGCTAGATTACCAAAGCATA....................................................... 22 1 1 33.00 33 18 15 0 0 0 0
.................................................................................................ATAAAGCTAGAGTACCAAAGCAT........................................................ 23 1 1 33.00 33 26 0 4 0 3 0
....................................................................................................AAGCTAGATTACCAAAGCAT........................................................ 20 0 1 33.00 33 17 13 0 1 2 0
..................................................................................................TAAATCTAGATTACCAAAGCAT........................................................ 22 1 1 30.00 30 2 22 1 4 1 0
..................................................................................................TTAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 30.00 30 0 27 2 0 1 0
.................................................................................................ATAAAGCTAGATTACCAAACCAT........................................................ 23 1 1 29.00 29 4 22 1 2 0 0
..................................................................................................TAAAGCTCGATTACCAAAGCAT........................................................ 22 1 1 29.00 29 1 24 1 0 3 0
..........................................................GGTTTGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 28.00 28 0 28 0 0 0 0
..........................................................GGTTTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 28.00 28 0 28 0 0 0 0
.................................................................................................AGAAAGCTAGATTACCAAAGCAC........................................................ 23 2 1 28.00 28 0 28 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCCT........................................................ 23 1 1 28.00 28 0 6 4 0 17 1
..................................................................................................TAAAGCTAGATTACCACAGCAT........................................................ 22 1 1 28.00 28 0 0 9 0 15 4
.................................................................................................ATAAAGCTAGCTTACCAAAGCAT........................................................ 23 1 1 26.00 26 0 19 4 0 2 1
..................................................................................................TAAGGCTAGATTACCAAAGCAT........................................................ 22 1 1 25.00 25 0 3 14 1 7 0
..................................................................................................TAAAGCTAGATTCCCAAAGCAT........................................................ 22 1 1 24.00 24 0 20 2 1 1 0
..................................................................................................TAAAGCTAGATTACCAAATCAT........................................................ 22 1 1 24.00 24 3 9 5 5 2 0
.................................................................................................AGATAGCTAGATTACCAAAGCAT........................................................ 23 2 1 24.00 24 0 24 0 0 0 0
.................................................................................................ATAAAGCTAGATTAACAAAGCAT........................................................ 23 1 1 22.00 22 0 11 5 0 5 1
.................................................................................................ATAAAGCTAGAATACCAAAGCAT........................................................ 23 1 1 22.00 22 21 0 1 0 0 0
.................................................................................................AGAAAGCTAGATTACCAAAGCA......................................................... 22 1 1 21.00 21 0 21 0 0 0 0
..................................................................................................TAAAGCTAGATAACCAAAGCAT........................................................ 22 1 1 21.00 21 21 0 0 0 0 0
..................................................................................................AAAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 21.00 21 3 17 0 0 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCCT........................................................ 22 1 1 21.00 21 0 0 1 0 19 1
..................................................................................................CAAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 19.00 19 3 7 3 2 1 3
...................................................................................................AAAGCTAGATTACCAAAGCA......................................................... 20 0 1 19.00 19 15 2 1 0 1 0
..................................................................................................GAAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 18.00 18 2 11 5 0 0 0
.................................................................................................ATAAAGCTAGACTACCAAAGCAT........................................................ 23 1 1 18.00 18 4 6 6 0 2 0
.................................................................................................GTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 18.00 18 13 1 1 1 1 1
..................................................................................................TAAAGCTAGATTACCAAAGTAT........................................................ 22 1 1 18.00 18 1 6 4 3 0 4
..................................................................................................TAAAGCTAGATTACCAACGCAT........................................................ 22 1 1 18.00 18 0 1 6 0 8 3
..................................................................................................TGAAGCTAGATTACCAAAGCAC........................................................ 22 2 1 18.00 18 0 18 0 0 0 0
..................................................................................................TAAAGCTAGATCACCAAAGCAT........................................................ 22 1 1 17.00 17 7 3 5 0 1 1
..................................................................................................TAAAGCTAGATTACCCAAGCAT........................................................ 22 1 1 17.00 17 0 0 6 2 9 0
..................................................................................................TAAAGCTAGATTACCAAGGCAT........................................................ 22 1 1 17.00 17 1 6 7 1 2 0
.................................................................................................ATAAAGCTAGATTACCCAAGCAT........................................................ 23 1 1 17.00 17 0 0 2 0 10 5
..................................................................................................TAAAGCTAGATTACCGAAGCAT........................................................ 22 1 1 17.00 17 3 6 3 2 1 2
.................................................................................................ATAAAGCTAGATTACCAAATCAT........................................................ 23 1 1 16.00 16 5 0 2 1 8 0
.................................................................................................ATAAAGCTAGATTACTAAAGCAT........................................................ 23 1 1 16.00 16 0 10 3 1 2 0
..................................................................................................TAAAGCTAGATTACCAAAGCGT........................................................ 22 1 1 15.00 15 2 2 6 0 4 1
..........................................................GCTTTGGCGCTTTAGCTGT................................................................................................... 19 0 1 15.00 15 0 12 0 0 2 1
..................................................................................................TAAAGCTAGAGTACCAAAGCAT........................................................ 22 1 1 15.00 15 2 0 10 0 2 1
..................................................................................................TAAAACTAGATTACCAAAGCAT........................................................ 22 1 1 15.00 15 2 6 3 2 2 0
.................................................................................................ACAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 14.00 14 1 7 5 0 1 0
..................................................................................................TAAAGCTAGATTAACAAAGCAT........................................................ 22 1 1 14.00 14 0 0 6 1 5 2
..................................................................................................TGAAGCTAGATTACCAAAGC.......................................................... 20 1 1 14.00 14 0 14 0 0 0 0
..................................................................................................TAAAGCTAGATTGCCAAAGCAT........................................................ 22 1 1 14.00 14 1 3 6 2 1 1
.................................................................................................ATAAAGCTAGATTACCACAGCAT........................................................ 23 1 1 14.00 14 0 0 6 0 5 3
..................................................................................................TAAAGCTGGATTACCAAAGCA......................................................... 21 1 1 13.00 13 4 0 5 0 4 0
.................................................................................................ATAAAGCTAGATTACCAAGGCAT........................................................ 23 1 1 13.00 13 4 2 4 1 1 1
..................................................................................................TACAGCTAGATTACCAAAGCAT........................................................ 22 1 1 13.00 13 0 12 1 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATAA...................................................... 24 2 1 13.00 13 11 2 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATG....................................................... 23 1 1 12.00 12 8 2 2 0 0 0
..................................................................................................TAGAGCTAGATTACCAAAGCAT........................................................ 22 1 1 12.00 12 4 1 5 1 0 1
..................................................................................................TAAAGCTAGATTACCAAACCAC........................................................ 22 2 1 12.00 12 0 12 0 0 0 0
..................................................................................................TAAAGCTAGGTTACCAAAGCAT........................................................ 22 1 1 12.00 12 5 1 2 1 1 2
.................................................................................................ATAAAGATAGATTACCAAAGCAT........................................................ 23 1 1 12.00 12 0 2 6 2 1 1
..........................................................GCTTTGGCGCTTTAGCTGTATGAA.............................................................................................. 24 1 1 12.00 12 2 10 0 0 0 0
.................................................................................................ATAAAGCTAGATTACAAAAGCAT........................................................ 23 1 1 11.00 11 3 1 7 0 0 0
.................................................................................................ATAAACCTAGATTACCAAAGCAT........................................................ 23 1 1 11.00 11 0 7 2 1 0 1
...................................................................................................AGAGCTAGATTACCAAAGCATT....................................................... 22 1 1 11.00 11 0 11 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAA............................................................ 19 0 1 11.00 11 8 0 2 0 1 0
..................................................................................................TAAAGCTAGATTACCTAAGCAT........................................................ 22 1 1 11.00 11 0 5 4 0 0 2
......................................................................................................GCTAGATTACCAAAGCAT........................................................ 18 0 1 11.00 11 1 9 0 1 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCTT........................................................ 22 1 1 11.00 11 0 0 8 0 3 0
.................................................................................................ATAAAGCTGGATTACCAAAGCA......................................................... 22 1 1 11.00 11 3 0 7 0 1 0
..................................................................................................TAAAGCTAGATTACCAAAACAT........................................................ 22 1 1 10.00 10 3 3 2 0 2 0
..................................................................................................TAAAGCTAGATTACTAAAGCAT........................................................ 22 1 1 10.00 10 0 6 2 0 2 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATAAA..................................................... 26 3 1 10.00 10 10 0 0 0 0 0
.................................................................................................ATAGAGCTAGATTACCAAAGCAT........................................................ 23 1 1 10.00 10 2 1 4 0 2 1
..................................................................................................TAAAGCTAGATTACCATAGCAT........................................................ 22 1 1 10.00 10 0 1 8 0 1 0
..................................................................................................TAAAGCTAGCTTACCAAAGCAT........................................................ 22 1 1 10.00 10 0 1 7 0 1 1
..................................................................................................TAAAGCGAGATTACCAAAGCAT........................................................ 22 1 1 10.00 10 0 2 8 0 0 0
............................................................TTTGGCGCTTTAGCTGTATGA............................................................................................... 21 0 1 10.00 10 4 4 1 1 0 0
..........................................................GCCTTGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 10.00 10 0 10 0 0 0 0
.................................................................................................ATAAAGCCAGATTACCAAAGCAT........................................................ 23 1 1 10.00 10 2 2 4 1 1 0
...................................................................................................AAAGCTAGATTACCAAAGC.......................................................... 19 0 1 10.00 10 5 5 0 0 0 0
.................................................................................................AAAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 10.00 10 1 7 1 0 1 0
..................................................................................................TGAAGCTAGATTACCAAAGCA......................................................... 21 1 1 10.00 10 0 10 0 0 0 0
.................................................................................................AGAAAGCTAGATTACCAAAGC.......................................................... 21 1 1 9.00 9 0 9 0 0 0 0
.................................................................................................CTAAAGCTAGATTACCAAAGCAC........................................................ 23 2 1 9.00 9 0 9 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCTT........................................................ 23 1 1 9.00 9 0 0 7 0 1 1
.................................................................................................ATAAAGCTAGATTACCAGAGCAT........................................................ 23 1 1 9.00 9 0 1 6 1 1 0
.................................................................................................AGAAAGCTAGATTACCAAAGCATA....................................................... 24 2 1 9.00 9 0 9 0 0 0 0
....................................................................................................AAGCTAGATTACCAAAGCATT....................................................... 21 0 1 9.00 9 4 4 0 0 1 0
.................................................................................................ATAAAGCTAGGTTACCAAAGCAT........................................................ 23 1 1 9.00 9 1 2 3 2 0 1
..................................................................................................TAAAGTTAGATTACCAAAGCAT........................................................ 22 1 1 9.00 9 1 7 0 1 0 0
.................................................................................................ATAAAGCTAGATTACCAAACCAC........................................................ 23 2 1 9.00 9 0 8 1 0 0 0
..........................................................GCTTTGGCGCTTTAGCTG.................................................................................................... 18 0 1 9.00 9 1 7 0 0 1 0
.................................................................................................ATAAAGCTAGATTACCAAAGTAT........................................................ 23 1 1 9.00 9 0 0 4 2 2 1
..................................................................................................TAAAGCCAGATTACCAAAGCAT........................................................ 22 1 1 9.00 9 5 0 2 0 1 1
.................................................................................................ATAAGGCTAGATTACCAAAGCAT........................................................ 23 1 1 9.00 9 1 2 3 0 2 1
.................................................................................................ATAAAGCTAGATTACCAAAGCATAA...................................................... 25 2 1 9.00 9 8 1 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATTT...................................................... 24 1 1 8.00 8 2 5 0 1 0 0
..................................................................................................TAATGCTAGATTACCAAAGCAC........................................................ 22 2 1 8.00 8 0 8 0 0 0 0
................................................................................................TCTAAAGCTAGATTACCAAAGCAT........................................................ 24 2 1 8.00 8 1 7 0 0 0 0
.................................................................................................ATACAGCTAGATTACCAAAGCAT........................................................ 23 1 1 8.00 8 0 0 6 0 2 0
..................................................................................................TAAAGCTAGACTACCAAAGCAT........................................................ 22 1 1 8.00 8 0 4 1 1 2 0
.................................................................................................ATAAAGCTAGATTACCAAAGCGT........................................................ 23 1 1 8.00 8 2 1 5 0 0 0
..................................................................................................TGAAGCTAGATTACCAAAGCATT....................................................... 23 1 1 8.00 8 0 8 0 0 0 0
.................................................................................................ATAAAGCTAGATCACCAAAGCAT........................................................ 23 1 1 8.00 8 2 2 3 1 0 0
.................................................................................................AGAAAGCTAGATTACCAAAGCATT....................................................... 24 1 1 8.00 8 0 8 0 0 0 0
.......................................TATTCGCCCCATTGCCGTT...................................................................................................................... 19 0 1 8.00 8 4 1 0 0 2 1
..........................................................GCTCTGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 8.00 8 0 8 0 0 0 0
..................................................................................................TAATGCTAGATTACCAAAGC.......................................................... 20 1 1 8.00 8 0 8 0 0 0 0
................................................................................................AATAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 8.00 8 8 0 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGAAT........................................................ 23 1 1 8.00 8 2 1 2 0 2 1
..................................................................................................TAAAGATAGATTACCAAAGCAT........................................................ 22 1 1 8.00 8 1 0 6 1 0 0
...................................................................................................AAAGCTAGATTACCAAAGCATG....................................................... 22 1 1 8.00 8 7 1 0 0 0 0
...................................................................................................AAAGCTAGATTACCAAAGCATTT...................................................... 23 1 1 7.00 7 3 4 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATGG...................................................... 24 1 1 7.00 7 7 0 0 0 0 0
..........................................................GCTCTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 7.00 7 0 7 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCGAAGCAT........................................................ 23 1 1 7.00 7 3 1 1 2 0 0
.................................................................................................ATAAAGCTAGATTACCAAAACAT........................................................ 23 1 1 7.00 7 1 2 2 1 0 1
.....................................................................................................AGCTAGATTACCAAAGCAT........................................................ 19 0 1 7.00 7 3 4 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGT.......................................................... 20 1 1 7.00 7 3 0 0 4 0 0
.................................................................................................ATAAAGCTAGATTATCAAAGCAT........................................................ 23 1 1 7.00 7 1 1 1 2 1 1
..................................................................................................TAATGCTAGATTACCAAAGCATT....................................................... 23 1 1 7.00 7 0 7 0 0 0 0
..........................................................GCTTTGGCGCTTTAGCTGTAC................................................................................................. 21 1 1 7.00 7 0 7 0 0 0 0
..................................................................................................TAAAGCTAGTTTACCAAAGCAT........................................................ 22 1 1 7.00 7 0 2 3 0 1 1
.................................................................................................ATAAAGCTACATTACCAAAGCAT........................................................ 23 1 1 7.00 7 0 0 4 0 3 0
..................................................................................................TAAAGCTAGATTATCAAAGCAT........................................................ 22 1 1 7.00 7 0 2 2 0 0 3
.................................................................................................ATAAAGCTAGATTGCCAAAGCAT........................................................ 23 1 1 7.00 7 1 2 4 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATAAA..................................................... 25 3 2 6.50 13 13 0 0 0 0 0
..................................................................................................TAAAGGTAGATTACCAAAGCAT........................................................ 22 1 1 6.00 6 0 6 0 0 0 0
.................................................................................................ATAAAACTAGATTACCAAAGCAT........................................................ 23 1 1 6.00 6 1 4 0 1 0 0
..................................................................................................TAAAGCTTGATTACCAAAGCAT........................................................ 22 1 1 6.00 6 0 0 0 1 4 1
...................................................................................................AAAGCTAGATTACCAAAGCAC........................................................ 21 1 1 6.00 6 1 5 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCAG........................................................ 23 1 1 6.00 6 2 3 0 0 0 1
..................................................................................................TAAAGCTAGAATACCAAAGCAT........................................................ 22 1 1 6.00 6 2 4 0 0 0 0
.................................................................................................ATGAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 6.00 6 0 1 4 0 0 1
..................................................................................................TAAAGCTATATTACCAAAGCAT........................................................ 22 1 1 6.00 6 1 0 1 3 1 0
...........................................................CTTTGGCGCTTTAGCTGTATGA............................................................................................... 22 0 1 6.00 6 4 2 0 0 0 0
................................................................................................TATAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 6.00 6 6 0 0 0 0 0
..........................................................GCCTTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 6.00 6 0 5 1 0 0 0
.................................................................................................AGAAAGCTAGATTACCAAACCAT........................................................ 23 2 1 6.00 6 0 5 1 0 0 0
..................................................................................................TAAAGCTAGATTTCCAAAGCAT........................................................ 22 1 1 6.00 6 0 1 1 0 3 1
.................................................................................................CGAAAGCTAGATTACCAAAGCAT........................................................ 23 2 1 5.00 5 0 5 0 0 0 0
...................................................................................................TAAACTAGATTACCAAAGCAT........................................................ 21 2 1 5.00 5 0 5 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAGAGCAT........................................................ 22 1 1 5.00 5 0 3 1 0 1 0
.................................................................................................ATAAAGCTAGATTACCAAAGCAAA....................................................... 24 2 1 5.00 5 5 0 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATG....................................................... 24 1 1 5.00 5 5 0 0 0 0 0
..................................................................................................TAAGGCTGGATTACCAAAGCAT........................................................ 22 2 1 5.00 5 0 0 4 0 1 0
.................................................................................................ATAATGCTAGATTACCAAAGCAT........................................................ 23 1 1 5.00 5 0 3 2 0 0 0
..................................................................................................TAAAGCTACATTACCAAAGCAT........................................................ 22 1 1 5.00 5 0 3 2 0 0 0
..................................................................................................TGAAGCTAGATTACCAAAGCATA....................................................... 23 2 1 5.00 5 0 5 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCAG........................................................ 22 1 1 5.00 5 0 0 2 0 2 1
..................................................................................................TAACGCTAGATTACCAAAGCAT........................................................ 22 1 1 5.00 5 0 0 3 1 1 0
..........................................................GCTTTTGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 5.00 5 0 4 0 1 0 0
...................................................................................................AAAGCTGGATTACCAAAGCAT........................................................ 21 1 1 5.00 5 0 0 4 1 0 0
..........................................................GGTTTGGCGCTTTAGCTGTA.................................................................................................. 20 1 1 5.00 5 0 5 0 0 0 0
.................................................................................................ATAAAGCTAGTTTACCAAAGCAT........................................................ 23 1 1 5.00 5 1 0 4 0 0 0
...................................................................................................AAAGCTAGATTACCAAAGCATTA...................................................... 23 1 1 5.00 5 2 2 0 0 0 1
..................................................................................................TAAAGCTAGATGACAAAAGCAT........................................................ 22 2 1 4.00 4 0 0 4 0 0 0
.................................................................................................ATATAGCTAGATTACCAAAGCAC........................................................ 23 2 1 4.00 4 0 4 0 0 0 0
..................................................................................................TAAAGCTAGATTCCAAAAGCAT........................................................ 22 2 2 4.00 8 0 8 0 0 0 0
................................................................................................GATAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 4.00 4 4 0 0 0 0 0
.................................................................................................ATAAAGCTCGATTACCAAAGCAT........................................................ 23 1 1 4.00 4 0 1 1 0 1 1
......................................ATATTCGCCCCATTGCCGTT...................................................................................................................... 20 0 1 4.00 4 0 2 0 0 0 2
.................................................................................................ATAAAGCTAGATAACCAAAGCAT........................................................ 23 1 1 4.00 4 0 4 0 0 0 0
..................................................................................................TAAAGCTCGATTCCCAAAGCAT........................................................ 22 2 1 4.00 4 0 4 0 0 0 0
.................................................................................................ATAAAGCTAGCTTACCAAAGCCT........................................................ 23 2 1 4.00 4 0 4 0 0 0 0
................................................................................................CATAAAGCTAGATTACCAAAGCA......................................................... 23 0 1 4.00 4 1 3 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCACT....................................................... 23 1 1 4.00 4 1 3 0 0 0 0
..................................................................................................TAAACCTAGATTACCAAAGCAC........................................................ 22 2 1 4.00 4 0 3 1 0 0 0
.................................................................................................ATATAGCTAGATTACCAAAGC.......................................................... 21 1 1 4.00 4 0 4 0 0 0 0
..................................................................................................TGAAGCTAGATTACCAAAGCATC....................................................... 23 2 1 4.00 4 0 4 0 0 0 0
..........................................................GTTTTGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 4.00 4 0 4 0 0 0 0
.................................................................................................ATATAGCTAGATTACCAAAGCA......................................................... 22 1 1 4.00 4 0 4 0 0 0 0
...................................................................................................AAATCTAGATTACCAAAGCATT....................................................... 22 1 1 4.00 4 0 4 0 0 0 0
.................................................................................................AGAAAGCTAGATTACCAAAGCATC....................................................... 24 2 1 4.00 4 0 4 0 0 0 0
...................................................................................................AAAGCTAGATTACCAAACCATT....................................................... 22 1 1 4.00 4 0 4 0 0 0 0
...................................................................................................AAAGCTGGATTACCAAAGCATT....................................................... 22 1 1 4.00 4 0 0 2 0 2 0
..........................................................GCTGTGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 4.00 4 0 4 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGAAT........................................................ 22 1 1 4.00 4 2 0 2 0 0 0
..........................................................GCTTTGGCGCTTTAGCTGTATGAAA............................................................................................. 25 1 1 4.00 4 1 3 0 0 0 0
.............................................................................................GATCATAAAGCTAGATTACCAAAGCAT........................................................ 27 2 1 4.00 4 0 4 0 0 0 0
..........................................................GCTTTGGAGCTTTAGCTGTATGA............................................................................................... 23 1 1 4.00 4 0 4 0 0 0 0
..................................................................................................TGAAGCTAGATTACCAAACCAT........................................................ 22 2 1 4.00 4 0 4 0 0 0 0
...................................................................................................TAAGCTAGATTACCAAAGCAT........................................................ 21 1 1 4.00 4 0 3 1 0 0 0
....................................................................................................AAGCTAGATTACCAAAGCAC........................................................ 20 1 1 4.00 4 0 4 0 0 0 0
.................................................................................................ATAAAGCTATATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 0 0 2 1 0
...............................................................................................TCATAAAGCTAGATTACCAAAGCAT........................................................ 25 0 1 3.00 3 0 3 0 0 0 0
.................................................................................................ATAAACCTAGATTACCAAAGCAC........................................................ 23 2 1 3.00 3 0 3 0 0 0 0
..........................................................GCTGTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................AAAGCTAGATTACCAAAGCATTC...................................................... 23 1 1 3.00 3 1 1 0 1 0 0
..................................................................................................TGAAGCTCGATTACCAAAGCAT........................................................ 22 2 1 3.00 3 0 3 0 0 0 0
..........................................................GCTTTGGCGCTTTAGCTGTATGG............................................................................................... 23 1 1 3.00 3 0 3 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAACCATT....................................................... 23 1 1 3.00 3 0 3 0 0 0 0
..................................................................................................TAAAGCTAAATTACCAAAGCAT........................................................ 22 1 1 3.00 3 0 0 2 0 1 0
.................................................................................................ATAAAGCTAGATTACCAA............................................................. 18 0 1 3.00 3 1 2 0 0 0 0
.................................................................................................ATAAAGCGAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 0 1 0 2 0
.................................................................................................ATCAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 2 0 0 1 0
..................................................................................................TCAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 3.00 3 0 0 1 0 2 0
..................................................................................................TTAAGCTAGATTACCAAAGC.......................................................... 20 1 1 3.00 3 0 2 1 0 0 0
.................................................................................................ATAAAGCTAGATTACCATAGCAT........................................................ 23 1 1 3.00 3 0 0 3 0 0 0
................................................................................................CACAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 3.00 3 0 3 0 0 0 0
..........................................................GCTTTTGCGCTTTAGCTGTATG................................................................................................ 22 1 1 3.00 3 0 2 0 1 0 0
.................................................................................................ATAAAGGTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 1 1 1 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATTAA..................................................... 25 2 1 3.00 3 3 0 0 0 0 0
.................................................................................................CTAAACCTAGATTACCAAAGCAT........................................................ 23 2 1 3.00 3 0 3 0 0 0 0
..................................................................................................TAAAGCTAGATCACAAAAGCAT........................................................ 22 2 1 3.00 3 0 2 0 0 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCAAA....................................................... 23 2 2 3.00 6 4 2 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATTT...................................................... 25 1 1 3.00 3 2 1 0 0 0 0
..........................................................GCTTTGGCGCTTTAGCTGTATT................................................................................................ 22 1 1 3.00 3 0 0 0 0 2 1
..................................................................................................TAAAGCTAGATTACCAAAGCATTAAA.................................................... 26 3 1 3.00 3 3 0 0 0 0 0
..................................................................................................TGATGCTAGATTACCAAAGCAT........................................................ 22 2 1 3.00 3 0 3 0 0 0 0
..........................................................GCTATGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 3.00 3 0 3 0 0 0 0
.................................................................................................ATAACGCTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 0 2 0 1 0
...................................................................................................AAAGATAGATTACCAAAGCAT........................................................ 21 1 1 3.00 3 0 0 3 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCA...................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..................................................................................................ATAAGCTAGATTACCAAAGCAT........................................................ 22 2 1 3.00 3 1 2 0 0 0 0
.................................................................................................TTAAAGCTAGATTACCAAAGCA......................................................... 22 1 1 3.00 3 1 1 1 0 0 0
..................................................................................................GAAAGCTAGATTACCAAAGCATC....................................................... 23 2 1 3.00 3 0 3 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAAGCATTC...................................................... 24 1 1 3.00 3 2 0 0 1 0 0
..................................................................................................TAAAGCTCGATTACCAAAGCAC........................................................ 22 2 1 3.00 3 0 3 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAACGCAT........................................................ 23 1 1 3.00 3 0 0 2 0 0 1
..........................................................GTTTTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 3.00 3 0 3 0 0 0 0
.................................................................................................TGAAAGCTAGATTACCAAAGCAT........................................................ 23 2 1 3.00 3 0 3 0 0 0 0
...................................................................................................AAAGCTAGATTACCAAAGCACT....................................................... 22 1 1 3.00 3 0 3 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATAT...................................................... 25 2 1 3.00 3 1 2 0 0 0 0
............................................................TTTGGCGCTTTAGCTGTATG................................................................................................ 20 0 1 3.00 3 0 1 0 0 1 1
..................................................................................................TAAAGCTAGATTACAAAAGCA......................................................... 21 1 2 2.50 5 1 3 1 0 0 0
..................................................................................................TAAAGCTAGATTACCCAAGCCT........................................................ 22 2 1 2.00 2 0 0 0 0 2 0
..................................................................................................TAAAGCTAGATTACCGCAGCAT........................................................ 22 2 1 2.00 2 0 0 1 0 1 0
..................................................................................................CAAAGCTAGATTACCAAAGCAC........................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAAAGCTAGATTACCACAGCA......................................................... 21 1 1 2.00 2 0 0 1 0 1 0
..................................................................................................TAAAGCTAGATTACCAATGCAT........................................................ 22 1 1 2.00 2 0 0 1 0 1 0
.................................................................................................ATAAAGCTAGATTACGAAAGCAT........................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................GCTATGGCGCTTTAGCTGTATGA............................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATATAGCTAGATTACCAAAGCATA....................................................... 24 2 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAATCTT........................................................ 23 2 1 2.00 2 0 0 2 0 0 0
...................................................................................................AGAGCTAGATTACCAAAGCAT........................................................ 21 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAGGCTT........................................................ 23 2 1 2.00 2 0 0 2 0 0 0
..................................................................................................CAAAGCTAGATTACCAAAGCATT....................................................... 23 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................AGATAGCTAGATTACCAAAGCA......................................................... 22 2 1 2.00 2 0 2 0 0 0 0
.............................................................TTGGCGCTTTAGCTGTATGA............................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0
................................................................................................CGTAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAAAGCTAGATTACCAAACCATC....................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAAACCTAGATTACCAAAGCATT....................................................... 23 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCAAGATTACCAAAGCAT........................................................ 23 1 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAAAGCGAGATTACCAAAGC.......................................................... 20 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................AGGCTAGATTACCAAAGCAT........................................................ 20 1 1 2.00 2 0 2 0 0 0 0
..........................................................GCTTTGGCGCCTTAGCTGTATGA............................................................................................... 23 1 1 2.00 2 0 1 0 0 0 1
..................................................................................................TGAAGCTAGATTACCAATGCAT........................................................ 22 2 1 2.00 2 0 1 1 0 0 0
...........................................................CGTTGGCGCTTTAGCTGTATGA............................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAAAGCTAGATCACCAAAGCAC........................................................ 22 2 1 2.00 2 0 1 1 0 0 0
..................................................................................................TAAAGCTAGATTACCAAGGCA......................................................... 21 1 1 2.00 2 1 0 0 0 0 1
..................................................................................................TAAAGCTAGAGGACCAAAGCAT........................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..................................................................................................TAAAGCTCGATTACCAAAGC.......................................................... 20 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................CTATAGCTAGATTACCAAAGCAT........................................................ 23 2 1 2.00 2 0 2 0 0 0 0
..................................................................................................TAGAACTAGATTACCAAAGCAT........................................................ 22 2 1 2.00 2 0 0 2 0 0 0
.................................................................................................ATAAAGCTAGAGTACCAAAGCA......................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................GCTTTGGCGCTTTAGTTGTATG................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCTAGCTTACCAAAGCAC........................................................ 23 2 1 2.00 2 0 2 0 0 0 0
...............................................................................................TTATAAAGCTAGATTACCAAAGCAT........................................................ 25 1 1 2.00 2 2 0 0 0 0 0
..................................................................................................TATAGCTAGATTACCAAAGCAT........................................................ 22 1 1 2.00 2 0 0 1 0 0 1
...................................................................................................AAAGCTAGATTACCCAAGCATT....................................................... 22 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCCC........................................................ 23 2 1 2.00 2 0 2 0 0 0 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATGG...................................................... 25 1 1 2.00 2 2 0 0 0 0 0
.................................................................................................ATAAAGCTTGATTACCAAAGCAT........................................................ 23 1 1 2.00 2 0 0 2 0 0 0
..................................................................................................TAAACCTCGATTACCAAAGCAT........................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..................................................................................................ATAAACTAGATTACCAAAGCAT........................................................ 22 3 1 2.00 2 0 2 0 0 0 0

Anti-sense strand reads

TGTTCACGTTCACAGAACATTACATTTGCACAAAAATTTATAAGCGGGGTAACGGCAACGAAACCGCGAAATCGACATACTATCTAAATTTATGAAGTATTTCGATCTAATGGTTTCGTAACCGAGACACCGGTTTGGGGTCGCTTGAACACTTTATTAGCTTGTACGTACATGTA

*****************************************.(((.((..((((.((((((((...(((((((.(((((..............))))).)))))))...)))))))).))))..)).)))...******************************************* 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 V041

embryo

 V056

head

 V049

head

 M046

female body

 V110

male body
................................................................................................GTATTTCGATCTATTGGTTT............................................................ 20 1 2 6.00 12 0 9 2 1 0 0
..............................................................................................AAGTATGTCGATCTATTGGTTTCG.......................................................... 24 2 2 5.00 10 7 1 0 0 1 1
.................................................................................................TATTTCGATCTTATGGTTTCT.......................................................... 21 2 2 5.00 10 0 3 1 6 0 0
................................................................................................GTATTTCGATCTATTGGTTTCA.......................................................... 22 2 2 3.50 7 5 1 1 0 0 0
...............................................................................................AGTATGTCGATCTATTGGTTTCGT......................................................... 24 2 2 3.00 6 6 0 0 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTTTC........................................................... 22 1 2 2.00 4 4 0 0 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTTTCGC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0
................................................................................................TTATTTCGATCTATTGGTTT............................................................ 20 2 5 1.80 9 0 5 1 3 0 0
..............................................................................................AAGTATTTCGATCTATTGGTTTCT.......................................................... 24 2 2 1.50 3 1 0 1 0 1 0
...............................................................................................AGTATTTCGATCTATTGGTTT............................................................ 21 1 2 1.50 3 1 0 1 1 0 0
...............................................................................................AGTATTTCGATCTATTGGTTCT........................................................... 22 3 2 1.50 3 2 1 0 0 0 0
................................................................................................GTACTTCGATCTAATGGTGTCG.......................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGAATTTCGCTCTAATGGTTTCT.......................................................... 23 3 1 1.00 1 0 1 0 0 0 0
................................................................................................TTATGTCGATCTAATGGTTTCG.......................................................... 22 2 1 1.00 1 0 1 0 0 0 0
................................................................................................GTATTTCGATCTATTGGTTTCG.......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GTAGTTCGATCTATTGGTTTCG.......................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.................................................................................................TATTTCGATCTTATGGTTT............................................................ 19 1 1 1.00 1 0 0 0 1 0 0
................................................................................................GTATTGCGCTCTATTGGTTTCG.......................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...............................................................................................ATTATTTCGATCTATTGGTTT............................................................ 21 2 2 1.00 2 0 0 1 1 0 0
.................................................................................................TATTTCGATCTATTGGTTTCG.......................................................... 21 1 1 1.00 1 0 0 1 0 0 0
................................................................................................GTTTTTCGATCTATTGGTTGCG.......................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................CGTATTTCGATCTAATGGTTTCT.......................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGTATTTCGATCTATTTGTTTCG.......................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................GTAGTTCGATATAATGGTTTCT.......................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTTTCG.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GTAGTTCGATCTAATGGATTCT.......................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTTTCC.......................................................... 23 2 2 1.00 2 1 1 0 0 0 0
................................................................................................GTATCTCGATCTATTGGTTTCG.......................................................... 22 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................AGTATTTAGATCTATTGGTTTCA.......................................................... 23 3 2 0.50 1 0 1 0 0 0 0
................................................................................................CTATTTCGATCTATTGGTCTCG.......................................................... 22 3 2 0.50 1 0 0 0 1 0 0
...............................................................................................CGTATTTCGATCTATTGGTTTC........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
................................................................................................GTATCTCGATATAATGGTTTCA.......................................................... 22 3 2 0.50 1 0 0 1 0 0 0
................................................................................................GTATTTCGATCTCATGGTTGCT.......................................................... 22 3 2 0.50 1 0 1 0 0 0 0
................................................................................................GTATTTCGATCTACTGGTTTCT.......................................................... 22 2 2 0.50 1 1 0 0 0 0 0
................................................................................................GTATGTCGATCTATTGGTTTCGT......................................................... 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................AGTATGTCGATCTAATGGTT............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................AGTATTTCGATCTAGTGGTTTCT.......................................................... 23 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTCTCC.......................................................... 23 3 2 0.50 1 1 0 0 0 0 0
................................................................................................GTATGTCGATCTATTGGTTTCTTAA....................................................... 25 3 2 0.50 1 0 0 0 0 1 0
................................................................................................GTATTTGGATCTATTGGTTTCA.......................................................... 22 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................AGTATTTGGATCTATTGGTTTCA.......................................................... 23 3 2 0.50 1 0 1 0 0 0 0
.................................................................................................TATTTCGATCTATTGGTTT............................................................ 19 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................AGTATTTCGATCTATTTGTTTCA.......................................................... 23 3 2 0.50 1 1 0 0 0 0 0
..............................................................................................TAGTATTTCGATCTATTGGTTTC........................................................... 23 2 2 0.50 1 1 0 0 0 0 0
................................................................................................GTCTTTCGATCTATTGGTTTCC.......................................................... 22 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................AGTATTTCGATCTATTGGTTTCA.......................................................... 23 2 2 0.50 1 0 0 1 0 0 0
.................................................................................................TATTTCGATCTATTGGTT............................................................. 18 1 2 0.50 1 0 0 0 0 1 0
................................................................................................GTTTTTCGATCTATTGGTTT............................................................ 20 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................AAGTATGTCGATCTATGGGTTTCG.......................................................... 24 3 3 0.33 1 0 1 0 0 0 0
...............................................................................................AGTATTTCGATTTATTGGTTT............................................................ 21 2 3 0.33 1 0 1 0 0 0 0
................................................................................................GAATTTCGATCTTATGGTTTCT.......................................................... 22 3 3 0.33 1 0 1 0 0 0 0
...............................................................................................AGTTTTTCGATCTACTGGTTTCT.......................................................... 23 3 3 0.33 1 0 0 1 0 0 0
...............................................................................................AGTATCTCGATCTATTTGTTTCG.......................................................... 23 3 3 0.33 1 1 0 0 0 0 0
................................................................................................GTATGTCGATCTTATGGTTTC........................................................... 21 2 3 0.33 1 0 0 0 0 1 0
...............................................................................................AGTATTTCCATCTATTGGTTTCC.......................................................... 23 3 3 0.33 1 0 1 0 0 0 0
................................................................................................CTATTTCGATCTATTGGTTT............................................................ 20 2 3 0.33 1 0 0 1 0 0 0
...............................................................................................AGTCTTTCGATCTATTGGTTT............................................................ 21 2 3 0.33 1 0 0 0 1 0 0
...............................................................................................TGTATCTCGATCTATTGGTTTCG.......................................................... 23 3 3 0.33 1 0 0 1 0 0 0
...............................................................................................AGTATTTCGATCTATTTGTTTCC.......................................................... 23 3 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGTATTTCTATCTATTGGTTT............................................................ 21 2 3 0.33 1 0 0 1 0 0 0
................................................................................................CTATTTCGATCTTATGGTTTCT.......................................................... 22 3 3 0.33 1 1 0 0 0 0 0
................................................................................................GTATGTCGATCTAGGGGTTTCG.......................................................... 22 3 4 0.25 1 0 0 0 1 0 0
.................................................................................................TCTTTCGATCTTAAGGTTTCG.......................................................... 21 3 4 0.25 1 0 0 1 0 0 0
................................................................................................CTATTTCGATCTATTGGTTTCC.......................................................... 22 3 4 0.25 1 0 0 0 1 0 0
................................................................................................GTATTTCGATCTATCGGTTTCA.......................................................... 22 3 4 0.25 1 0 1 0 0 0 0
................................................................................................GTAATTCGATCTATTGGTTTCA.......................................................... 22 3 4 0.25 1 1 0 0 0 0 0
................................................................................................GTATTTCGCTCTATGGGTTTC........................................................... 21 3 5 0.20 1 1 0 0 0 0 0
................................................................................................GTATCTCTATCTAATGGTTTCT.......................................................... 22 3 5 0.20 1 0 1 0 0 0 0
................................................................................................GTATTTCTATCTATTGGTTTCC.......................................................... 22 3 5 0.20 1 0 1 0 0 0 0
.................................................................................................TATTTCGATCTATGCGTTTCG.......................................................... 21 3 5 0.20 1 0 0 1 0 0 0
................................................................................................GTATTTCGATTTATTGGTTT............................................................ 20 2 6 0.17 1 0 1 0 0 0 0
................................................................................................GTATTTCTATCTATTGGTTTCA.......................................................... 22 3 6 0.17 1 0 1 0 0 0 0
................................................................................................GTATTTCTATCTATTGGTTT............................................................ 20 2 6 0.17 1 0 0 1 0 0 0
.................................................................................................TATTTCGATATACTGGTTTCT.......................................................... 21 3 7 0.14 1 0 1 0 0 0 0
.................................................................................................GATTTCGATCTACTGGTTTCT.......................................................... 21 3 7 0.14 1 0 0 0 1 0 0
.................................................................................................GATTTCGATCTAATGGTTTTT.......................................................... 21 3 9 0.11 1 0 1 0 0 0 0
.............................................................................................GAAGTATGTCGATCTATT................................................................. 18 2 10 0.10 1 0 0 0 0 1 0
.................................................................................................TATTTCTATCTATTGGTTTCA.......................................................... 21 3 10 0.10 1 0 0 0 1 0 0
................................................................................................GTATGTCGATATAAGGGTTTC........................................................... 21 3 12 0.08 1 1 0 0 0 0 0
.................................................................................................TATATCGATCTATTGGTTTAG.......................................................... 21 3 12 0.08 1 0 0 0 1 0 0
.................................................................................................TTTTTCGATCTATTGGTTT............................................................ 19 2 13 0.08 1 0 0 1 0 0 0
.................................................................................................TATTTCTATCTATTGGTTT............................................................ 19 2 16 0.06 1 0 0 0 1 0 0
.................................................................................................TATTTCGATCTTACGGTTTCT.......................................................... 21 3 16 0.06 1 0 1 0 0 0 0
.................................................................................................TATTTCGATCTTATGATTTCT.......................................................... 21 3 17 0.06 1 0 0 0 1 0 0
..................................................................................................ATTTCGCTCTAACGGTTTCT.......................................................... 20 3 19 0.05 1 0 1 0 0 0 0
......................CGTCTGCACAAAAATTTTTA...................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
.................................................................................................TATTTCGTTCTTATGGCTTC........................................................... 20 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:7202089-7202264 + dmo-mir-79 Known_mirbase ACAAGTGCAAGTGTCTTGTAATGTAA-ACGTGTTTTTA---------------AA--T-----------------------ATTCGCCCCATTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG------CCAAACCCCAGCG---AACTT------------------------------------GTGAAA---TAATCGA---------------------------ACA------TGCATGT-------ACAT
droVir3 scaffold_12963:12862981-12863159 - dvi-mir-79 Known_mirbase GAA-GTGTA------ATAGCCAGGA---------T-TA-----------------GAT-----------------------GAACGCCGCACTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGCCAG-CTT----AGCAAA------GTTGTGAAACGATTTACATAATTTAACTAATAGTTAATAGT------------------------------------------------------TGT----ACCTGAT
droGri2 scaffold_14978:831052-831228 + dgr-mir-79 Known_mirbase TGTGTTACATCTATACGGTTATTTA--AAGTGCTT-CT-----------------TCT-----------------------TGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATCGGCG-CCTGTGGCCAG-CTTAACAAACG------TTTTC------------------------------------ATGAAA---TTGATAT---------------------------ATA------TATATAT-------ATAT
droWil2 scf2_1100000004874:28816-29003 - dwi-mir-79-1 Known_mirbase TCATGTGTGTGTG---------------------T-GT-------GATATA----TAGT--GACAATTTATTGTAGTAATGGATAATGGTCTTGCCTATGCTTTGGCGCTTTAGCTGTATGATAGATTTG-ACTACTTCATAAAGCTAGATTACCAAAGCATGGGCT-CTGGCTG----ACTTAATCAACGCAAGTGTTTT-------------------------------------CTCGAAA--AAGTGGC---------------------------AAA------TTTATAT-------TAAT
dp5 4_group3:8443943-8444125 + dps-mir-79 Known_mirbase AAAAGTGTT------TTA--TCG---AAAGTGTTT-AA-----------------AAGTACAACAATCTAATCT-GTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG----A-AACTTCATCCAA---------------------------------------A---CAATGAAA---T------------------------------CCGATC------TGCGTGT-------GCAC
droPer2 scaffold_1:9895086-9895244 + dpe-mir-79 Known_mirbase AAAAGTACG--------ACAATCTAATCTGTGCTT-A---------------------------------------------AGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG----A-AACTTCATCCAA---------------------------------------A---CAATGAAA---T------------------------------CCGATC------TGCGTGT-------GCAT
droAna3 scaffold_12916:15864680-15864860 - dan-mir-79 Known_mirbase TATCTTCTA-----------TTAAAAAAATTGTTT-AAAATATATGGTATA----TAG------------------TGTTCTATAGCTGCTTAACCGATGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCCGCAG----G-CCTGTCTTCAAGG-------------------------------------------AATAAAA---TAATAAT---------------------------TCA------TTTATAT-------CCTT
droBip1 scf7180000396717:103427-103568 - GTAAT---------------------ATAGTGTTG-A----------------AATAT-----------------------AGTATCTGTTCTACCTGTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATGGGTT-TTCGCAG----G-TTAATCTTCATTAA-------------------------------------A---TAATATAC-------------------------------------TC---------------------ATAT
droKik1 scf7180000302382:529479-529644 + TAAATTAC----------------------TGTTT-T-------------------T-------------------------TGGACTGCTCTTCTGACGCTTTGGCGCTTTAGCTGTATGATAGATTTTTACTACTTCATAAAGCTAGATTACCAAAGCATTGGCGGTCTGCAG----GGTAAATCATCATAAA-------------------------------------T---ACAAAATATA---------GAATT--------CGTAGAAT-----TTCTGGTCGTGTT--A-------CATT
droFic1 scf7180000454078:624198-624345 + ACCAGTGC-------------------------TA-A----------------AAGAA-----------------------ATAACCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TTAACCATCAAATA-------------------------------------G---ACCACCACCA---------CAATG---------------------C------------TGT-------GCTT
droEle1 scf7180000490579:645368-645531 - ACAACCA----------ACATGTTAAAAAGTGTTT-A----------------AAGAA-----------------------TGTGGCTGCTTGACCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAG----A-TCAATCATCCAAAA-------------------------------------T---AAGTGAGA------------------------------------------------TGTATTTCTTTCAAAT
droRho1 scf7180000768553:9518-9673 + AAAAGCA------------------ATATGTGAAC-TA----GT-TTT---TAAATAA-----------------------AGTAGCTGCCTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAG----A-TCAATCATCAAGTT-------------------------------------T---AACTAAGA-------------------------------------CG------------GT-------GCCT
droBia1 scf7180000301468:858136-858328 + ATAAG----------------------AAGTGCTC-TA------------------------------TGTTTTTGAAAA-GGAAGCTGCCTTGCCGCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCATCAGTTA-------------------------------------C---AACTTGAAACGGAGTGATTACTTGATATTAATATTATAAATTATGATC------GG--TGT-------GTTT
droTak1 scf7180000415914:422789-422936 + ATAAG----------------------AAGTGATT-T-------------------AA-----------------------GGCAGCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGCAG----A-TCAATCAACGAATA-------------------------------------T---ATCTTAAAA----------------------------------------------GGGTGGTGAT---TTTT
droEug1 scf7180000408961:272485-272620 + AAAAG----------------------------------------------------------------------------AGAAACTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGTAG----A-TCAATCATCAAAAA-------------------------------------T---AACTGAAG-------------------------------------TGC------TGCTTAT-------TAAA
dm3 chr2L:16698520-16698688 + dme-mir-79 Known_mirbase ATCAGTGA------AATACATTGCAATGAGTGCCT-TA-----------------GAG-----------------------TGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----G-TCAATCGTCAGAAA-------------------------------------C---AATTTAAG-------------------------------------ATA------TGCTTGTTTAT---TGTT
droSim2 2l:16265356-16265509 + dsi_275 confident TGAAA---------------------TGAGTGCCT-CA-----------------GAG-----------------------TGTAGCTGACTTACCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TCAATCGTCGGAAA-------------------------------------C---AAATTAAG-------------------------------------CCA------TGTTTAGTTAT---TGCT
droSec2 scaffold_7:345541-345699 + dse-mir-79 Known_mirbase AACAT----------------TGAAATGAGTGCCT-CA-----------------GAG-----------------------TGTAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TCAATCGTCAGAAA-------------------------------------C---AAATTAAG-------------------------------------CCA------TGTTTATTTAT---TGCT
droYak3 2R:4404386-4404549 - dya-mir-79 Known_mirbase AAA-GTGA------TTTACATTGGAATAAGTGAATTGA-----------------GAG-----------------------TGTAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTATACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCATCAGA---------------------------------------C---AAATTAGG-------------------------------------CCA------TGCTTAGT------TTTT
droEre2 scaffold_4845:19768160-19768330 + der-mir-79 Known_mirbase ATAAGTACAAGTGAATTGCATTGGAATAAGTGACT-TA-----------------GAG-----------------------TGCAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCTTCAGAAA-------------------------------------G---AAACTAGG-------------------------------------CCC------TGCTTAT-------TCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACAAGTGCAAGTGTCTTGTAATGTAA-ACGTGTTTTTA---------------AA--T-----------------------ATTCGCCCCATTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG------CCAAACCCCAGCG---AACTT------------------------------------GTGAAA---TAATCGA---------------------------ACA------TGCATGT-------ACATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22119266.00192668086729977276142212492
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................23112976.00129765940398682204426071305
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211816.0081653310317415117
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................221557.00557881044622
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231515.00515329434652
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221495.004951511691432120
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221485.0048532051748869
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211441.00441277325516223
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201433.0043310914132825217
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................221407.0040715247182233
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................231399.00399149135521710
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................231249.00249290082111
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................231181.00181950166811
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211154.0015456014912
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................231151.0015178302671
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................241114.0011430124770
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................241107.00107540123911
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24169.006928101381
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................19167.00675004634
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................20161.006132021359
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22157.005735102181
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................20149.00491300441
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................24142.004211001300
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23136.00362700081
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21135.00353010301
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................22135.00359001250
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................22133.003318000150
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................20133.003317020131
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20119.00191501120
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................19115.00150120120
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................24113.00131100020
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................23112.0012800220
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24112.00122000100
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19111.0011801200
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................18111.0011100091
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................26110.00101000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................21110.0010400141
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................19110.0010500050
..............................................................................................................................................AAGCTAGATTACCAAAGCATT.................................................................................................................................................2119.009401040
...................................................................................................GCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................1819.009101070
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2519.009800010
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2418.008200051
.........................................................T-----------------------ATTCGCCCCATTGCCGTT.................................................................................................................................................................................................................1918.008412010
.............................................................................................................................................AAAGCTAGATTACCAAAGCATG.................................................................................................................................................2218.008700010
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTT................................................................................................................................................2317.007300040
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1917.007300040
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................2017.007300004
...................................................................................................GCTTTGGCGCTTTAGCTGTAC............................................................................................................................................................................................2117.007000070
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2526.50131300000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2116.006100050
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2316.006210030
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2216.006400020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2415.005500000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2415.005500000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2215.005012200
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTA................................................................................................................................................2315.005210020
......................................................A--T-----------------------ATTCGCCCCATTGCCGTT.................................................................................................................................................................................................................2014.004020020
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCA...................................................................................................................................................2314.004100030
..............................................................................................................................................AAGCTAGATTACCAAAGCAC..................................................................................................................................................2014.004000040
.........................................................................................................................................TCATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2513.003000030
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTC................................................................................................................................................2313.003100011
...................................................................................................GCTTTGGCGCTTTAGCTGTATGG..........................................................................................................................................................................................2313.003000030
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1813.003100020
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTAA...............................................................................................................................................2513.003300000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2323.006400020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2513.003200010
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2213.003012000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTAAA..............................................................................................................................................2613.003300000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCA................................................................................................................................................2413.003300000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTC................................................................................................................................................2413.003200001
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT................................................................................................................................................2513.003100020
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2013.003011010
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2012.002100010
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCCC..................................................................................................................................................2312.002000020
droVir3
GAA-GTGTA------ATAGCCAGGA---------T-TA-----------------GAT-----------------------GAACGCCGCACTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGCCAG-CTT----AGCAAA------GTTGTGAAACGATTTACATAATTTAACTAATAGTTAATAGT------------------------------------------------------TGT----ACCTGATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................221293890.0029389001489211710220486837147682134411455881415665956316259913302566325615867958460745201851983656197141611724395247699427213653813265219043108831221174291925412382010001101002001100032812752386231393025461541295527491731414840681930
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................231182171.0018217101398086870718318725400780535377120559529287314846591287173911564003264930501122468375236130091309763824702231073886639331756656949986659731300651990000201010010001013152110214523450601562114773234382922442423361113
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................2116534.00653400802984611424817426630215258120162691052241881491461352272265024351895031458017718816411714919000000000000000000004703805982510631120231000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................2215160.005160005831069143277660421085021646941549674971861533022215514061363891268015218115613182106000000000000000000034226019491615200101131101
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................2112034.0020340021713941945137204257301932341333633371403610596727033103562861558044846700000000000000000002171101382501000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................2111737.0017371234470222341826339471715322687282430505111068554114586456558954122140001020000000010001053410172210891110711211101020
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................2011524.00152411221816442516241721516181181212611121238302472421039939146361742649031292900001000000000000004226011131213653355061104
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................2311504.001504001008697762321020281814211562323289760299812631302376421728614041902700000000000000000000890674913300001010000
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................2011490.0014901013242322611218841301369329335027135935312727453554432852316283243173427001110310101100011137219041612701384118861051
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................2311118.0011180012431414000005420001052317642686271717213730764513651451000000000000000000010302093231000000030011
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................221849.00849006942101700101002499166421117412627819120149172232338402531600000000000000000001410734100001000100020
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................231825.008250021184250030110610111103227232438615037156353135547835628160000000000000000000100036611100000000010
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221646.006460027314761362914051321201121718191119331113719419171064910000000000000000000042132011633310002410100
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231619.0061900524727849020400143142011432731304757201151154464328600011203000000000004310383210110226000000
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................191555.0055523571931871720112212414127520162015522162623737111013512813100000000000000001000115610111151160110240011
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................241549.00549003341707002001182286281781416135844111473019421271120211200000000000000000002570422100020000200000
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................181453.0045300603719982130010264431105353116139661661622510439230000000000000000000000010200000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................221449.00449004513110000000310002117321325132912949161423832551719400000000000000000000110271611000000020000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................221370.00370012181635011310012303222234247716195931512769111120140000000000000000000261012320100000100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................241361.00361009240301100001000001200715132217819715363214134201800000000000000000000200023022010000001001
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................231305.00305003463221100100011010113811143135171973201900016380000000000000000100001102100000000200001
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................191276.00276002201411111100205343325742510612171441539104213177000000000000000000002109601000000000000
.........................................................T-----------------------GAACGCCGCACTGCCGTT.................................................................................................................................................................................................................191267.002673131100001100000010001000123413010022050000010000000000000000000000004137944404900000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................241233.00233001552124000000003000027006333417236391160110824000000000000000000010800000001000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................231186.00186007415314000011002020152313939723316835561760000000000000000000020013101001000000011
........................................................AT-----------------------GAACGCCGCACTGCCGTT.................................................................................................................................................................................................................201179.001790000000010101000000001000010201100111010000110112210000000000000101041361723181900001
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................241173.0017300802030000000311121153113816233837112710121032000000000000000000000001200000000000000
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................201158.001580019174800000301211311112343102615816564550000000000000000000010025100000010000000
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................181156.00156000010210010100055100342284513101012398361176000000000000000000000005700000000010000
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................211143.001430018042901000000011000007731111554500024044000000000000000000000001633420121431013
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................241124.0012400401010001000000000000212105210610082029923000000000000000000000006100000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................241116.001160081000000000100000000018710112214079256720000000000000000000000012100000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................261102.00102001100000010000000000000971212001110218151000000000000000000000000007310000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................211100.001000021215001000011323021346353642932123223000000000000000000002003123000000010000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................25196.00960020000000010000000000005695020117161415420000000000000000000000004200000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTA................................................................................................................................................24188.008800301000000010000001001253131014803178940000000000000000000000009200000000000001
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20177.007700330000000000013213104001032214310001001000000000000000000003007000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................25175.0075004000000000000000000000122101111103189500000000000000000000000009700000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................22171.007100124058000000000000050102221650803000016000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................22169.006900007412100000111110070172001000202131142000000000000000000012002100000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTT................................................................................................................................................24151.00510020113000000030112002112282140021012300000000000000000000000004100000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................20150.005000151100000000010000000011000300401409123000000000000000000001100001000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTAAA..............................................................................................................................................26149.00490000001000000000000000001262000080687100000000000000000000000005200000000000000
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................19147.00470040112000001010100051032142031321051200000000000000000000000000000000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24147.004700320000000000000000000000210010001110000000001000000000000000100137300000012124
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................23141.00410000212000101000000010074001100010001062000000000000000000010008100000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................23137.003700300000000000000000000010500102101212321000000000000000000000002001000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGA....................................................................................................................................................21134.003400100001100300000000010011111100100014120000000000000000000002000001000000000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................22134.00340011000000000000000000002021000010020100000000000000000000000000015300200313122
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTT................................................................................................................................................23133.00330010100000000010000001003020102400231121000000000000000000000005200000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................22131.00310051100000000000200001122025010200001020000000000000000000000002100000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT................................................................................................................................................25131.00310042001000000000000000011064100321310100000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................23131.00310090121000000000010000021122120000002110000000000000000000000002000000000000000
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................20130.00300020153000100000000020001122002100010011000000000000000000000000020002000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTA................................................................................................................................................25130.00300010100000000000000010020122020101264200000000000000000000000002000000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTA................................................................................................................................................23130.00300010000000000000000000000070002010821100000000000000000000000003400000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................18129.00290010101000000020001000320021222110002050000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTAA...............................................................................................................................................25128.00280000000000000000000000004111000040167210000000000000000000000000000000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................20127.00270005405000000000000000010020000100001010000000000001000000011000000021010000000
...................................................................................................GCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................18126.00260000104020400000000000010000000000000000000100000000000000000000000004206100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCC...................................................................................................................................................22125.00250060101000000000000020010000111401000024000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAAA....................................................................................................................................................21220.504100200000000000000000000003000211000023050000000000000000000000000031000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTAAA..............................................................................................................................................27120.00200010000000000000000000000021000010234300000000000000000000000003000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAA.....................................................................................................................................................19119.00190030100000000002000000001001112200110011000000000000000000001000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAT................................................................................................................................................24119.00190000110000000000000110010120031200000122000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................22119.00190043000000000001000103010000000100001010000000000001000000000000200000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCC................................................................................................................................................24119.00190030000000000000000010000000212201000007000000000000000000000000000000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................19119.00190080000000000011000000000220100300000000000000000000000000001000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCC...................................................................................................................................................21118.00180010102000000002011011010010220100000001000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................25118.00180000000000000000000000001050000020203120000000000000000000000000200000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT................................................................................................................................................25117.00170000200000000000000000011212101110101110000000000000000000000000000000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................19117.00170010107000000010010000010000000000000030000000000000000000001000000010000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCCC..................................................................................................................................................22116.001600000010000000000010140000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTAA...............................................................................................................................................24116.00160020000000000000000000001001000020342010000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................24115.00150030000000000000000000000021000400102000000000000000000000000000000000020000000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCA...................................................................................................................................................23114.00140010000000000000000000000002231110101001000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTG................................................................................................................................................24113.00130030000000000000000000010021100100031000000000000000000000000000000000000000000
.......................................................GAT-----------------------GAACGCCGCACTGCCGTT.................................................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000100032012400000
..............................................................................................................................................AAGCTAGATTACCAAAGCATT.................................................................................................................................................21112.00120040000000000000000000001020000000000000000000000000000000000005000000000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTAAA..............................................................................................................................................25112.00120030000000000100000000000120000000011000000000000000000000000003000000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................22112.00120000202000100000000100000001000000000000000000000000000000050000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGT....................................................................................................................................................21111.00110011000201000000000000001100010000001200000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTAA...............................................................................................................................................26111.00110000000000000000000000001001000030111000000000000000000000000003000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCT................................................................................................................................................24111.00110020010000000001000020010000000201000001000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................21111.00110020000000000011101000110000000000000001000000000000000000001100000000000000000
.........................................................................................................................................TCATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................25111.00110000001000000000000000001011031010110000000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCA................................................................................................................................................24110.00100010000000000000000000000001011101010200000000000000000000000100000000000000000
....................................TA-----------------GAT-----------------------GAACGCCGCACTGCCGTT.................................................................................................................................................................................................................23110.00100000000000000000000000000000000000010000000000000000000000000000000033020100000
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................22110.00100060000000000000000000000111000000000010000000000000000000000000000000000000000
.....................................A-----------------GAT-----------------------GAACGCCGCACTGCCGTT.................................................................................................................................................................................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000030032100000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATG.................................................................................................................................................2218.0080020000000000000000001000110010010000100000000000000000000000000000000000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2018.0080030000001000001000000000000000001001010000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATCT................................................................................................................................................2518.0080010001000000000000000010000100102000100000000000000000000000000000000000000000
.........................................................T-----------------------GAACGCCGCACTGCCGT..................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000003020200000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTTA...............................................................................................................................................2517.0070000000000000000000000000010000120120000000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATCC................................................................................................................................................2517.0070000000000000000000000000010010202000001000000000000000000000000000000000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATCA................................................................................................................................................2517.0070000000000000000000000000000100000041100000000000000000000000000000000000000000
droGri2
TGTGTTACATCTATACGGTTATTTA--AAGTGCTT-CT-----------------TCT-----------------------TGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATCGGCG-CCTGTGGCCAG-CTTAACAAACG------TTTTC------------------------------------ATGAAA---TTGATAT---------------------------ATA------TATATAT-------ATATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2213023.00302316871336
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2311738.0017381097641
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211235.0023522213
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221200.0020018515
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211120.001201119
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................20199.0099927
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................21167.0067625
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................20139.0039354
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................23120.0020191
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................19116.0016151
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24115.0015141
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................22114.001477
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22112.0012111
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................23112.0012102
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................2318.00826
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2316.00660
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2315.00505
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................2015.00550
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................2014.00440
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................1914.00440
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1814.00440
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................2214.00422
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................1914.00440
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................2314.00404
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................2313.00330
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2313.00330
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2412.00220
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2112.00220
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................2412.00220
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCC................................................................................................................................................2412.00211
.............................................................................................................................................AAAGCTAGATTACCAAAGCATG.................................................................................................................................................2212.00220
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2212.00211
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2111.00110
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2411.00110
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2211.00110
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2111.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTC................................................................................................................................................2411.00110
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2211.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCG...................................................................................................................................................2111.00110
...........................................................................................................................................ATAAAGCTAGATTACCAAGT.....................................................................................................................................................2011.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................2211.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCCA...............................................................................................................................................2511.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCTA..................................................................................................................................................2211.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATGC................................................................................................................................................2411.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCC...................................................................................................................................................2111.00110
............................................................................................................................................TAAAGCTAGATTACCAAAA.....................................................................................................................................................1911.00110
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1811.00110
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1911.00110
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATGTT...............................................................................................................................................2611.00110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATCG................................................................................................................................................2411.00110
............................................................................................................................................TAAAGCTAGATTACCAAAC.....................................................................................................................................................1911.00101
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAT.........................................................................................................................................................................................2411.00110
...........................................................................................................................................ATAAAGCTAGATTACCAAACAT...................................................................................................................................................2230.33101
............................................................................................................................................TAAAGCTAGATTACCAAACAT...................................................................................................................................................21120.08101
droWil2
TCATGTGTGTGTG---------------------T-GT-------GATATA----TAGT--GACAATTTATTGTAGTAATGGATAATGGTCTTGCCTATGCTTTGGCGCTTTAGCTGTATGATAGATTTG-ACTACTTCATAAAGCTAGATTACCAAAGCATGGGCT-CTGGCTG----ACTTAATCAACGCAAGTGTTTT-------------------------------------CTCGAAA--AAGTGGC---------------------------AAA------TTTATAT-------TAATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2228632.501726513195678498294683
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2325047.00100941594135146044183
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................222461.5092303588446111
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................222420.008403142575246
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................202416.508332824567178
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................212353.00706122813315149
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................202197.0039427503169145
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................212185.00370578124442
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................192101.50203233254112
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................23288.50177246110523
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23281.001620691911
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................21271.0014204933951
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22220.504101101911
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................22216.50330160116
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................23213.5027014193
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23212.0024012093
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22212.0024081141
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19211.5023050153
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................2429.501907075
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2429.0018070110
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2228.0016111040
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................2327.001407115
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................2026.501303136
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2425.501105123
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2125.001005050
....................................................................................................CTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2124.50903051
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................1924.50910062
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................2024.00831040
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................2424.00802150
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................2024.00804013
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2323.50703040
........................................................................................................................................TTCATAAAGCTAGATTACCAAA......................................................................................................................................................2223.00600060
........................................................................................................................................TTCATAAAGCTAGATTACCA........................................................................................................................................................2023.00600024
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2123.00601032
...........................................................................................................................................ATAAAGCTAGATTACCAAAT.....................................................................................................................................................2023.00600033
...........................................................................................................................................ATAAAGCTAGATTACCAAAGA....................................................................................................................................................2122.50500050
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2222.50500050
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2022.50501031
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1922.50501013
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1822.50501022
...........................................................................................................................................ATAAAGCTAGATTACCAAACAT...................................................................................................................................................2222.50500014
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2022.00400013
...........................................................................................................................................ATAAAGCTAGATTACCAAAAA....................................................................................................................................................2122.00402110
...................................................................................................GCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................1822.00431000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGT....................................................................................................................................................2122.00401021
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2221.50300021
................................................................................................TATGCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................2121.50301011
........................................................................................................................................TTCATAAAGCTAGATTACC.........................................................................................................................................................1921.50310002
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2021.50300012
............................................................................................................................................TAAAGCTAGATTACCAAACAT...................................................................................................................................................2141.50600033
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2421.50302001
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................2021.00200101
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................1921.00201001
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2321.00201010
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2121.00201010
........................................................................................................................................TTCATAAAGCTAGATTACCAA.......................................................................................................................................................2121.00201010
............................................................................................................................................TAAAGCTAGATTACCAAAA.....................................................................................................................................................1921.00200011
....................................................................................................CTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2321.00202000
...........................................................................................................................................ATAAAGCTAGATTACCAT.......................................................................................................................................................1841.00400004
............................................................................................................................................TAAAGCTAGATTACCAAAGAT...................................................................................................................................................2121.00200002
......................................................................................................TTGGCGCTTTAGCTGTATGATA........................................................................................................................................................................................2221.00200020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................2521.00200020
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2421.00201010
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1821.00201010
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2521.00202000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2421.00200020
....................................................................................................CTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2021.00202000
.............................................................................................................................................AAAGCTAGATTACCAAAG.....................................................................................................................................................1821.00201010
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2221.00201010
............................................................................................................................................TAAAGCTAGATTACCAAAGCATGG................................................................................................................................................2420.50101000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2520.50101000
............................................................................................................................................TAAAGCTAGATTACCAAAGCACCA................................................................................................................................................2420.50101000
.........................................................................................................................................TCATAAAGCTAGATTACCAA.......................................................................................................................................................2020.50100010
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCG...................................................................................................................................................2220.50101000
.........................................................................................................................................TCATAAAGCTAGATTACCAAAG.....................................................................................................................................................2220.50100001
.................................................................................GATAATGGTCTTGCCTAT.................................................................................................................................................................................................................1820.50100010
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2220.50101000
.........................................................................................................................................TCATAAAGCTAGATTACCAAAGC....................................................................................................................................................2320.50100010
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCA...................................................................................................................................................2320.50101000
dp5
AAAAGTGTT------TTA--TCG---AAAGTGTTT-AA-----------------AAGTACAACAATCTAATCT-GTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG----A-AACTTCATCCAA---------------------------------------A---CAATGAAA---T------------------------------CCGATC------TGCGTGT-------GCACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22116371.0016371083097531201475207312651061785530
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................23110400.0010400062744871067071284534580218210
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211943.009430726279179319172411
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221857.00857069424131460112588
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201541.0054112925010712371811310
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231509.0050902245514181106123103
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211500.005000318596582741243
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221446.0044609155816132124866
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211370.003700284349261711106
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................221274.0027401411216130200
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................201263.0026302254211431220
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................231140.0014007818721065122
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................231133.001330922403001310
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................231131.00131043727060300
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................231103.0010309720011200
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................19192.009207240220525
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24174.007405451111650
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24148.0048032111300100
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22146.004603075020200
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20142.004204001000010
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22137.003703510001000
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19130.003002220130110
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................20127.002701020112632
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................21126.002601310020352
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21123.002301351120010
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24123.002301520000303
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................22118.001801610000010
...........................................................................................................................................ATAAAGCTAGATTACCAAAGA....................................................................................................................................................21117.001701310100200
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................26114.00140900000500
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................19114.001401211000000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................20114.00140045310001
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................24113.001301100000200
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................24112.00120720010200
................................................................................TAAGCCCTGCTCTGCTTCT.................................................................................................................................................................................................................19112.001201110000000
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................22112.001201200000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2319.0090330000030
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1919.0090600020100
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2418.0080400001030
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2318.0080710000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2118.0080700001000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2418.0080500000300
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2517.0070700000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2217.0070312001000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2317.0070120220000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2017.0070600001000
....................................................................................................CTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2116.0060600000000
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1816.0060400010100
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................1916.0060040200000
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2016.0060200010300
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1815.0050110000012
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2315.0050500000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2215.0050100130000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2215.0050103000100
...........................................................................................................................................ATAAAGCTAGATTACCAAAGT....................................................................................................................................................2115.0050100013000
............................................................................................................................................TAAAGCTAGATTACCAAAA.....................................................................................................................................................1914.0040300100000
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................2014.0040110002000
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2014.0040300001000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2514.0040400000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGT..........................................................................................................................................................................................2314.0040210000100
........................................................................................................................................TTCATAAAGCTAGATTACCA........................................................................................................................................................2014.0040101020000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGC....................................................................................................................................................2213.0030120000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2413.0030120000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2113.0030200100000
.............................................................................................................................................AAAGCTAGATTACCAAAG.....................................................................................................................................................1813.0030300000000
..............................................................................................................................................AAGCTAGATTACCAAAGCA...................................................................................................................................................1913.0030300000000
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1813.0030100000110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTA................................................................................................................................................2413.0030300000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2213.0030200100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2413.0030300000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2213.0030000300000
............................................................................................................................................TAAAGCTAGATTACCAAAGCACA.................................................................................................................................................2313.0030300000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCACC.................................................................................................................................................2313.0030210000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAAA....................................................................................................................................................2122.5050500000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTT................................................................................................................................................2312.0020200000000
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2012.0020100000001
...............................................................................TTAAGCCCTGCTCTGCTTCT.................................................................................................................................................................................................................2012.0020200000000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCA...................................................................................................................................................2312.0020110000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGAT.........................................................................................................................................................................................2212.0020101000000
...................................................................................................GCTTTGGCGCTTTAGCTGTAC............................................................................................................................................................................................2112.0020020000000
........................................................................................................................................TTCATAAAGCTAGATTACC.........................................................................................................................................................1912.0020001010000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCCC..................................................................................................................................................2312.0020110000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................2512.0020200000000
....................................................................................................CTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2012.0020200000000
......................................................................................................TTGGCGCTTTAGCTGTATGAT.........................................................................................................................................................................................2111.0010100000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAT...............................................................................................................................................2511.0010100000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCCA..................................................................................................................................................2211.0010000100000
droPer2
AAAAGTACG--------ACAATCTAATCTGTGCTT-A---------------------------------------------AGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG----A-AACTTCATCCAA---------------------------------------A---CAATGAAA---T------------------------------CCGATC------TGCGTGT-------GCATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22111229.00112297440740517274135548
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2318143.0081430325019711783261257
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211552.0055203515781117
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221396.0039602784337011
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211180.00180086229585
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201154.00154378128404
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211130.00130086315251
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221120.0012001937193213
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................22179.007906014140
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................23168.006803951572
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23156.00560542000
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................20149.00490314491
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................23148.00480341571
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23146.00460421120
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................23139.003902501130
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24133.00330312000
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................19125.00251112632
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22125.00250250000
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19120.0020090371
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20118.00180130230
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................22117.00170110060
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................24113.00130130000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22112.0012061230
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24111.0011080111
..................................T-A---------------------------------------------AGCCCTGCTCTGCTTCT.................................................................................................................................................................................................................19111.0011920000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2619.009081000
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2119.009050040
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1818.008020060
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2318.008080000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2518.008080000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2417.007040030
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2216.006060000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2315.005021110
...........................................................................................................................................ATAAAGCTAGATTACCAAAGA....................................................................................................................................................2115.005050000
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2015.005000140
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1814.004040000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2514.004040000
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................2014.004040000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2414.004020020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGT....................................................................................................................................................2113.003010011
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2113.003030000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2013.003010002
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2113.003000030
..................................................................................................................................................................TGGCT-C-TGTGG----A-AACTTCATCCAA---------------------------------------A---C.......................................................................2613.003300000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................2013.003011010
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2413.003030000
............................................................................................................................................TAAAGCTAGATTACCAAAGCTC..................................................................................................................................................2213.003000030
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2112.002010100
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................2512.002020000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2412.002020000
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................1912.002000110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2312.002010010
..................................................................................................................................................................TGGCT-C-TGTGG----A-AACTTCAT.......................................................................................................................2012.002200000
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1912.002010010
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2212.002000110
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTC................................................................................................................................................2412.002000002
...........................................................................................................................................ATAAAGCTAGATTACCAAAAA....................................................................................................................................................2112.002011000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCC...................................................................................................................................................2211.001000100
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2411.001010000
droAna3
TATCTTCTA-----------TTAAAAAAATTGTTT-AAAATATATGGTATA----TAG------------------TGTTCTATAGCTGCTTAACCGATGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCCGCAG----G-CCTGTCTTCAAGG-------------------------------------------AATAAAA---TAATAAT---------------------------TCA------TTTATAT-------CCTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22110051.001005116261337809239215692318
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2315616.00561699590536212295061619
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201496.004966422721299146
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211447.004472306712651162
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221289.00289716781250
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221266.0026611556537845
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................201162.0016295496129
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211160.001602610239218
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211154.0015449166361037
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................221136.0013671180731
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................231123.001232954612616
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................231107.001074970213
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................191104.001049384179
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22195.00952738216012
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................23188.0088262115134
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24176.0076381017614
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24159.005910462100
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23149.00497400002
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23118.00181132101
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................21117.00171400111
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22117.0017581210
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20115.00151100211
..................................................................................................TGCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................22112.0012720300
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................20112.0012450021
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................22111.0011401600
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................20111.0011410114
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT................................................................................................................................................25110.0010500104
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................1919.009200304
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1919.009143100
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2319.009090000
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2119.009050121
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2418.008160001
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................2018.008050102
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2417.007070000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2317.007040201
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2215.005230000
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................2015.005100004
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2215.005320000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2115.005050000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2215.005050000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2115.005010103
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2014.004310000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2414.004120010
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1814.004021100
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTT................................................................................................................................................2314.004100201
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2214.004001003
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTTT...............................................................................................................................................2613.003100002
...............................................................................TCTATAGCTGCTTAACCGAT.................................................................................................................................................................................................................2013.003000003
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2213.003300000
.....................................................................................................TTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2213.003120000
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1813.003200100
............................................................................................................................................TAAAGCTAGATTACCAAAT.....................................................................................................................................................1912.002000002
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2412.002100100
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1812.002100100
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCTG..................................................................................................................................................2312.002000200
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................1912.002100001
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................2412.002020000
......................................................................................................TTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................1912.002100001
...........................................................................................................................................ATAAAGCTAGATTACCAAACAT...................................................................................................................................................2221.503100011
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTA................................................................................................................................................2411.001010000
..............................................................................TTCTATAGCTGCTTAACCGAT.................................................................................................................................................................................................................2111.001000001
droBip1
GTAAT---------------------ATAGTGTTG-A----------------AATAT-----------------------AGTATCTGTTCTACCTGTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATGGGTT-TTCGCAG----G-TTAATCTTCATTAA-------------------------------------A---TAATATAC-------------------------------------TC---------------------ATATSizeHit CountTotal NormTotal
No Reads
droKik1
TAAATTAC----------------------TGTTT-T-------------------T-------------------------TGGACTGCTCTTCTGACGCTTTGGCGCTTTAGCTGTATGATAGATTTTTACTACTTCATAAAGCTAGATTACCAAAGCATTGGCGGTCTGCAG----GGTAAATCATCATAAA-------------------------------------T---ACAAAATATA---------GAATT--------CGTAGAAT-----TTCTGGTCGTGTT--A-------CATTSizeHit CountTotal NormTotal
No Reads
droFic1
ACCAGTGC-------------------------TA-A----------------AAGAA-----------------------ATAACCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TTAACCATCAAATA-------------------------------------G---ACCACCACCA---------CAATG---------------------C------------TGT-------GCTTSizeHit CountTotal NormTotal
No Reads
droEle1
ACAACCA----------ACATGTTAAAAAGTGTTT-A----------------AAGAA-----------------------TGTGGCTGCTTGACCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAG----A-TCAATCATCCAAAA-------------------------------------T---AAGTGAGA------------------------------------------------TGTATTTCTTTCAAATSizeHit CountTotal NormTotal
No Reads
droRho1
AAAAGCA------------------ATATGTGAAC-TA----GT-TTT---TAAATAA-----------------------AGTAGCTGCCTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAG----A-TCAATCATCAAGTT-------------------------------------T---AACTAAGA-------------------------------------CG------------GT-------GCCTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAAG----------------------AAGTGCTC-TA------------------------------TGTTTTTGAAAA-GGAAGCTGCCTTGCCGCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCATCAGTTA-------------------------------------C---AACTTGAAACGGAGTGATTACTTGATATTAATATTATAAATTATGATC------GG--TGT-------GTTTSizeHit CountTotal NormTotal
No Reads
droTak1
ATAAG----------------------AAGTGATT-T-------------------AA-----------------------GGCAGCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGCAG----A-TCAATCAACGAATA-------------------------------------T---ATCTTAAAA----------------------------------------------GGGTGGTGAT---TTTTSizeHit CountTotal NormTotal
No Reads
droEug1
AAAAG----------------------------------------------------------------------------AGAAACTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGTAG----A-TCAATCATCAAAAA-------------------------------------T---AACTGAAG-------------------------------------TGC------TGCTTAT-------TAAASizeHit CountTotal NormTotal
No Reads
dm3
ATCAGTGA------AATACATTGCAATGAGTGCCT-TA-----------------GAG-----------------------TGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----G-TCAATCGTCAGAAA-------------------------------------C---AATTTAAG-------------------------------------ATA------TGCTTGTTTAT---TGTTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2212137785.002137785000013558183166965168240661196003302270559153115827656662629011963732223433423953918102469318626492034103961945641173014874445269347785930112121151443872053399703128517387950000000000000000043895461063463539775243405790518021575319918683144365222137944729813096831166850684420062449293711627173680859510832238228722731086126323971826841960331817522014051824281050691257941010084715741469252547591939053092768868913866128131274482418030517857529517423300000402264698531999024933066336602431649326719388170334581331351292175893510633752139932451721583521894672386518946135515071081991263800100100402467286765531122526703335292350135821899979151067841011594176052788762101475186411891106051627129118238000054420011371108401178328441252173646851173251517625603473035205848549808722379110364263765453101415973996488757118474616334818822203814183534196162370281541851791947210118326814004578022291146718331948144016386281189413581151630786822892605161364034687197610728176017261160820170333291533791158547084254946700212275631088399705471139681341645287696024075225346124271048036711144561028511118
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droSim2
TGAAA---------------------TGAGTGCCT-CA-----------------GAG-----------------------TGTAGCTGACTTACCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TCAATCGTCGGAAA-------------------------------------C---AAATTAAG-------------------------------------CCA------TGTTTAGTTAT---TGCTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22181388.0081388162186520010551057220026516551581730974300134
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................23137458.00374589334940058362462676533458398206288001
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1816663.00666300000000006662100000
..................................................................................................................................................TAGATTACCAAAGCAT..................................................................................................................................................1611717.00171700000000241711000000
...................................................................................................................................................AGATTACCAAAGCAT..................................................................................................................................................1511317.00131700000020011314000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................2111174.00117410642001117518232537415934000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................2111076.001076000150032513819148170000
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................181894.0089400000013121762789010000
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................191811.00811161020017151015729600000
.................................................................................................................................................CTAGATTACCAAAGCAT..................................................................................................................................................171806.008060000000001805000000
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201776.007769411290061719275681427000
............................................................................................................................................TAAAGCTAGATTACCA........................................................................................................................................................161757.007570000000435745000000
...........................................................................................................................................ATAAAGCTAGATTACCA........................................................................................................................................................171534.005340000000712524000000
...........................................................................................................................................ATAAAGCTAGATTACC.........................................................................................................................................................161463.004630000003001459000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221459.00459101160047576584174815000
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................191397.003970000001514636325100000
............................................................................................................................................TAAAGCTAGATTACC.........................................................................................................................................................151374.003740000001122368000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231370.003700014001061203628601500000
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221267.00267003300141321479301000
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................201264.002641320100191547201101000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................231245.0024500050017949466122531000
............................................................................................................................................TAAAGCTAGATTACCAA.......................................................................................................................................................171213.00213000000314313180000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................231191.0019100080025639921551000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................221172.00172000500210311222423000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211168.001689004006243139010000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................221163.001630013001213237221432000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................221135.001350014001002118135000
...................................................................................................GCTTTGGCGCTTTAGCT................................................................................................................................................................................................171110.0011000000057383210000000
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................181101.001010001001116379000000
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................19198.0098000000000098000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23192.00920004004289470108000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24178.007800140084161715157000
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................21176.007600010021261557001000
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................20170.0070000000100069000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................23169.0069100000011066000000
................................................................................................................................................GCTAGATTACCAAAGCA...................................................................................................................................................17152.0052000000000052000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................22151.0051000000001047012000
...................................................................................................GCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................18135.0035103000100030000000
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................22135.0035000400611157100000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................20132.00320020005100015000000
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21127.002700000036348300000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24127.0027000100000022103000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................22126.0026000100000013084000
.............................................................................................................................................AAAGCTAGATTACCAAA......................................................................................................................................................17124.0024000000120021000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................24122.0022000300100030510000
................................................................................................................................................GCTAGATTACCAAAGCATT.................................................................................................................................................19120.0020000000000020000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................22120.002000100012952000000
...........................................................................................................................................ATAAAGCTAGATTAC..........................................................................................................................................................15119.0019000000100018000000
................................................................................................................................................GCTAGATTACCAAAGC....................................................................................................................................................16116.0016000000000016000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20116.001600020000036113000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................23115.0015000000000015000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................21114.0014100000000013000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................23114.0014000000000014000000
............................................................................................................................................TAAAGCTAGATTACCAAAA.....................................................................................................................................................19113.001300000001155100000
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................20112.001200000021008001000
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................19112.0012000000100011000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................24112.001200020001124002000
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................19111.0011000000100010000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................25111.001100000030421010000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................25111.001100020010103013000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................23111.001100000010324010000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24111.001100000035210000000
.......................................................................................................TGGCGCTTTAGCTGTATG...........................................................................................................................................................................................18110.0010000000000010000000
................................................................................................................................................GCTAGATTACCAAAG.....................................................................................................................................................15210.0020000000000020000000
................................................................................................................................................GCTAGATTACCAAAGCAC..................................................................................................................................................18110.0010000000000010000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2418.00800000000106001000
..................................................................................................................................................TAGATTACCAAAGCATT.................................................................................................................................................1718.00800000000008000000
................................................................................................................................................GCTAGATTACCAAAGCAG..................................................................................................................................................1818.00800000000008000000
.............................................................................................................................................AAAGCTAGATTACCAAAG.....................................................................................................................................................1818.00800000011006000000
.............................................................................................................................................AAAGCTAGATTACCA........................................................................................................................................................1517.00700000000007000000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2417.00700020000005000000
................................................................................................................................................GCTAGATTACCAAAGCAA..................................................................................................................................................1817.00700000000007000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2216.00600010000005000000
.......................................................................................................TGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................1916.00600000000006000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2016.00600000021201000000
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2015.00500000000310001000
....................................................................................................CTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2115.00500000002011100000
..................................................................................................................................................TAGATTACCAAAGCA...................................................................................................................................................1515.00500000000113000000
.............................................................................................................................................AAAGCTAGATTACCAA.......................................................................................................................................................1615.00500000000005000000
.................................................................................................................................................CTAGATTACCAAAGC....................................................................................................................................................1515.00500000000005000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATAA................................................................................................................................................2315.00500000000013001000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2215.00500000000004001000
....................................................................................................CTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2315.00500000020120000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTT................................................................................................................................................2314.00400000000000013000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAA..................................................................................................................................................2114.00400000000001003000
......................................................................................................TTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................1914.00400000000004000000
...................................................................................................................................................AGATTACCAAAGCATT.................................................................................................................................................1614.00400000000004000000
.................................................................................................................................................CTAGATTACCAAAGCA...................................................................................................................................................1614.00400000000004000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2614.00400010010002000000
................................................................................................................................................GCTAGATTACCAAAGCATA.................................................................................................................................................1914.00400000000004000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2214.00400000000001300000
............................................................................................................................................TAAAGCTAGATTACCAAAGCTC..................................................................................................................................................2213.00300000000003000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCTA..................................................................................................................................................2213.00300000000003000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2313.00300010000002000000
..............................................................................................................................................AAGCTAGATTACCAA.......................................................................................................................................................1513.00300000002001000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCG...................................................................................................................................................2113.00300000000003000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATTA................................................................................................................................................2513.00300000000000003000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT................................................................................................................................................2513.00300000000003000000
.................................................................................................................................................CTAGATTACCAAAGCATA.................................................................................................................................................1813.00300000000101001000
.........................................................................................................................ATAGATTTAAACTACTTCAA.......................................................................................................................................................................2012.00200010000000010000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATGCT...............................................................................................................................................2512.00200000000002000000
...................................................................................................GCTTTGGCGCTTTAGCTGTAA............................................................................................................................................................................................2112.00200000001100000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTA................................................................................................................................................2412.00200000000010001000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................2512.00200010001000000000
.............................................................................................................................................AAAGCTAGATTACCAAAGA....................................................................................................................................................1912.00200000020000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAT................................................................................................................................................2412.00200000000001001000
.........................................................G-----------------------TGTAGCTGACTTACCATT.................................................................................................................................................................................................................1912.00200200000000000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATC...........................................................................................................................................................................................2212.00200000001001000000
............................................................................................................................................TAAAGCTAGATTACCAAT......................................................................................................................................................1812.00200000000002000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2112.00200000000001001000
droSec2
AACAT----------------TGAAATGAGTGCCT-CA-----------------GAG-----------------------TGTAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAG----A-TCAATCGTCAGAAA-------------------------------------C---AAATTAAG-------------------------------------CCA------TGTTTATTTAT---TGCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22118227.00182276466345035254786
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................23111479.00114794145167215754087
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211909.009095715370215
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211502.005022528041129
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221471.004712573032152
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221387.0038715829272
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201340.00340922124203
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................191244.002443348199
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................201144.0014417135109
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231117.00117364725
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................21190.0090356643
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................23183.0083498620
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................22159.005942287
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22156.0056304148
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20149.004937219
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23136.003623445
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................21123.002312092
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22123.002314153
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................20120.00207463
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24120.00209416
.........................................................G-----------------------TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................19118.001815021
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24118.001813140
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24115.001513011
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23114.00147016
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................20113.00130418
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21113.00133055
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................20111.00113224
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19110.00101018
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................2319.0095112
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2219.0095013
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2219.0097020
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................1918.0086002
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................2016.0062040
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2216.0064011
....................................................................................................CTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2115.0052102
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2215.0054001
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................1915.0051040
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1815.0052003
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2415.0054100
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2314.0044000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAC..................................................................................................................................................2113.0033000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2213.0030201
...................................................................................................GCTTTGGCGCTTTAGCTGTATGATAG.......................................................................................................................................................................................2613.0030120
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1813.0031020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2513.0031020
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2113.0031101
.....................................................................................................TTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2212.0021100
...........................................................................................................................................ATAAAGCTAGATTACCAAAT.....................................................................................................................................................2012.0020002
...........................................................................................................................................ATAAAGCTAGATTACCAAAGT....................................................................................................................................................2112.0020002
............................................................................................................................................TAAAGCTAGATTACCAAGC.....................................................................................................................................................1912.0021001
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2312.0022000
........................................................AG-----------------------TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................2012.0020110
............................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2312.0022000
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2012.0022000
.................................................................................TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................1812.0021010
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1912.0021010
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1812.0021100
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2412.0021010
...........................................................................................................................................ATAAAGCTAGATTACCAAACAT...................................................................................................................................................2222.0044000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2012.0020002
.......................................................GAG-----------------------TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................2112.0020002
....................................CA-----------------GAG-----------------------TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................2312.0020101
.............................................................................................................................................AAAGCTAGATTACCAAAG.....................................................................................................................................................1812.0021001
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2412.0022000
...................................................................................................GCTTTGGCGCTTTAGCTGTATC...........................................................................................................................................................................................2211.0010010
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCA...................................................................................................................................................2311.0011000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAG..................................................................................................................................................2111.0011000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATTA................................................................................................................................................2311.0011000
..............................................................................................................................................AAGCTAGATTACCAAAGCA...................................................................................................................................................1911.0011000
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2011.0010001
............................................................................................................................................TAAAGCTAGATTACCAAAGCACC.................................................................................................................................................2311.0011000
......................................................................................................TTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................1911.0011000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA................................................................................................................................................2511.0010010
.....................................A-----------------GAG-----------------------TGTAGCTGACTTGCCATT.................................................................................................................................................................................................................2211.0010001
........................................................AG-----------------------TGTAGCTGACTTGCCA...................................................................................................................................................................................................................1811.0011000
droYak3
AAA-GTGA------TTTACATTGGAATAAGTGAATTGA-----------------GAG-----------------------TGTAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTATACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCATCAGA---------------------------------------C---AAATTAGG-------------------------------------CCA------TGCTTAGT------TTTTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2219063.00906332693879462752307811930030
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2315795.0057955194338219054122534800010
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................211474.004741288201134108120000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221292.002920167102199040000
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201275.0027520561308545110000
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221269.002690241457691140000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231253.00253043193103400000
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211216.002160951552262170000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................221107.001070534222800000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................231105.001050524032710000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................22194.0094078111400000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................21166.006621426121920000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................20161.0061065410000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................23148.0048024000510000
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................19132.00320170021300000
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................20129.0029212301920000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24126.0026016700210000
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21124.0024151301400000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23122.0022013700200000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24120.002008422310000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................24114.0014011210000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................22114.001409010400000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................23112.001203900000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20111.0011010000100000
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................19110.001000721000000
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2119.00904210200000
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2219.00904301010000
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................2019.00904100040000
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................2218.00806200000000
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2418.00802310110000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2217.00700600100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................2315.00501200200000
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1815.00502200100000
...................................................................................................GCTTTGGCGCTTTAGCTGTAC............................................................................................................................................................................................2115.00500500000000
...................................................................................................GCTTTGGCGCTTTAGCTGC..............................................................................................................................................................................................1914.00400400000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2414.00403001000000
...............................................................................................................................................AGCTAGATTACCAAAGCAT..................................................................................................................................................1914.00402000200000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGT..........................................................................................................................................................................................2314.00401210000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................2314.00403000100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCT...................................................................................................................................................2213.00300000300000
............................................................................................................................................TAAAGCTAGATTACCAAA......................................................................................................................................................1813.00302000100000
...................................................................................................GCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................1812.00200200000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2212.00200002000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2412.00200100100000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2312.00200001100000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2212.00201100000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2112.00200000200000
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2012.00201100000000
.........................................................G-----------------------TGTAGCTGCCTTGCCATT.................................................................................................................................................................................................................1912.00200200000000
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1812.00202000000000
............................................................................................................................................TAAAGCTAGATTACCAAAGA....................................................................................................................................................2012.00200000020000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATG.................................................................................................................................................2212.00202000000000
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................1912.00200000200000
..............................................................................................................................................AAGCTAGATTACCAAAGCATT.................................................................................................................................................2112.00202000000000
..................................................................................................TGCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................2212.00202000000000
..............................................................................................................................................AAGCTAGATTACCAAAGCAC..................................................................................................................................................2011.00100100000000
.................................................................................................TTGCTTTGGCGCTTTAGCTG...............................................................................................................................................................................................2011.00110000000000
droEre2
ATAAGTACAAGTGAATTGCATTGGAATAAGTGACT-TA-----------------GAG-----------------------TGCAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG----A-TCAATCTTCAGAAA-------------------------------------G---AAACTAGG-------------------------------------CCC------TGCTTAT-------TCATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................TAAAGCTAGATTACCAAAGCAT..................................................................................................................................................22115240.00152406221147376273458536362
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2319882.00988235788123011929472753174
............................................................................................................................................TAAAGCTAGATTACCAAAGCA...................................................................................................................................................2111142.0011428019295932050
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCA...................................................................................................................................................221538.005383145171531462
............................................................................................................................................TAAAGCTAGATTACCAAAGC....................................................................................................................................................201414.0041411817125362260
...................................................................................................GCTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................221307.0030715171230192140
.............................................................................................................................................AAAGCTAGATTACCAAAGCAT..................................................................................................................................................211256.0025615224142550
...........................................................................................................................................ATAAAGCTAGATTACCAAAGC....................................................................................................................................................211154.001544210912900
............................................................................................................................................TAAAGCTAGATTACCAAAG.....................................................................................................................................................191139.001393113016880
...................................................................................................GCTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................231134.0013459148582416
...........................................................................................................................................ATAAAGCTAGATTACCAAAG.....................................................................................................................................................201133.001332001016960
............................................................................................................................................TAAAGCTAGATTACCAAAGCATT.................................................................................................................................................23198.009880300780
.............................................................................................................................................AAAGCTAGATTACCAAAGCATT.................................................................................................................................................22180.0080631005110
............................................................................................................................................TAAAGCTAGATTACCAAAGCAC..................................................................................................................................................22178.0078581201520
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..................................................................................................................................................23166.0066198000381
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..................................................................................................................................................23149.0049160001320
............................................................................................................................................TAAAGCTAGATTACCAAAGCATA.................................................................................................................................................23138.003832000222
............................................................................................................................................TAAAGCTAGATTACCAAAGCAA..................................................................................................................................................22129.002924111020
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.................................................................................................................................................24124.002421000120
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..................................................................................................................................................23121.002120000190
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.................................................................................................................................................24120.002016011020
...........................................................................................................................................ATAAAGCTAGATTACCAAA......................................................................................................................................................19114.00146000080
.............................................................................................................................................AAAGCTAGATTACCAAAGCA...................................................................................................................................................20114.001412010010
...................................................................................................GCTTTGGCGCTTTAGCTGTAT............................................................................................................................................................................................21112.00124011240
............................................................................................................................................TAAAGCTAGATTACCAAAGCATG.................................................................................................................................................23112.001212000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATA.................................................................................................................................................2218.0085110100
..............................................................................................................................................AAGCTAGATTACCAAAGCAT..................................................................................................................................................2018.0084100210
....................................................................................................CTTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2217.0075000200
............................................................................................................................................TAAAGCTAGATTACCAAAGCG...................................................................................................................................................2117.0077000000
.............................................................................................................................................AAAGCTAGATTACCAAAGCATC.................................................................................................................................................2216.0063100110
...................................................................................................GCTTTGGCGCTTTAGCTGTATT...........................................................................................................................................................................................2216.0060006000
.............................................................................................................................................AAAGCTAGATTACCAAAGC....................................................................................................................................................1916.0064000020
..........................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2416.0065100000
............................................................................................................................................TAAAGCTAGATTACCAAAGCT...................................................................................................................................................2116.0061000050
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.........................................................................................................................................................................................2415.0053100010
............................................................................................................................................TAAAGCTAGATTACCAAAGCAG..................................................................................................................................................2215.0053011000
...................................................................................................GCTTTGGCGCTTTAGCTGTA.............................................................................................................................................................................................2014.0041200010
................................................................................................................................................GCTAGATTACCAAAGCAT..................................................................................................................................................1814.0041000030
............................................................................................................................................TAAAGCTAGATTACCAAAGT....................................................................................................................................................2014.0040000400
............................................................................................................................................TAAAGCTAGATTACCAAAGCATC.................................................................................................................................................2314.0042010100
.....................................................................................................TTTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2114.0042010010
...........................................................................................................................................ATAAAGCTAGATTACCAA.......................................................................................................................................................1814.0043000010
.............................................................................................................................................AAAGCTAGATTACCAAAGCATG.................................................................................................................................................2213.0031000020
...........................................................................................................................................ATAAAGCTAGATTACCAAACAT...................................................................................................................................................2213.0030000030
...................................................................................................GCTTTGGCGCTTTAGCTGT..............................................................................................................................................................................................1913.0030000120
..............................................................................................................................................AAGCTAGATTACCAAAGCATT.................................................................................................................................................2113.0033000000
...........................................................................................................................................ATAAAGCTAGATTACCAT.......................................................................................................................................................1812.0020000020
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTA................................................................................................................................................2412.0022000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT................................................................................................................................................2512.0021000010
....................................................................................................CTTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2112.0022000000
..............................................................................................................................................AAGCTAGATTACCAAAGCA...................................................................................................................................................1912.0022000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2512.0022000000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGAT.........................................................................................................................................................................................2412.0021100000
......................................................................................................TTGGCGCTTTAGCTGTATGA..........................................................................................................................................................................................2012.0022000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA...............................................................................................................................................2612.0022000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATTT................................................................................................................................................2412.0022000000
............................................................................................................................................TAAAGCTAGATTACCAAAGCATAA................................................................................................................................................2412.0022000000
.....................................................................................................TTTGGCGCTTTAGCTGTATG...........................................................................................................................................................................................2012.0020000020
...................................................................................................GCTTTGGCGCTTTAGCTGTATGT..........................................................................................................................................................................................2312.0021010000
...................................................................................................GCTTTGGCGCTTTAGCTGTATGATAGT......................................................................................................................................................................................2711.0011000000
.....................................................................................................................................TACTTCATAAAGCTAGATTACCAAAGCAT..................................................................................................................................................2911.0011000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.................................................................................................................................................2411.0011000000
...........................................................................................................................................ATAAAGCTAGATTACCAAAA.....................................................................................................................................................2011.0010000010

Generated: 10/20/2015 at 07:37 PM