ID:

dmo-mir-304

 Coordinate:

scaffold_6359:3259161-3259249 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.2 -33.9 -33.6

Flybase annnotation

intron [Dmoj\GI21762-in]; pre_miRNA [Dmoj\mir-304-RM]; utr5 [utr5_plus_15221]; miRNA [Dmoj\miR-304-RA]

No Repeatable elements found

Sense Strand Reads

ATATATATATATTTCTATATATGGATATATTCTATGTCCAACTCTTATCTGCAGCATTGATTAATCTCAATTTGTAAATGTGAGCGATTTTTAACTATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCAGCATATGCCACATTTTGTACAAAAAAAAAAAAAAAAAAAAAAACCAAAA

**********************************************..((((((..((((.(((((((...(((((((.(((((((................)))..)))))))))))...))))))).))))..))))))....******************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V110

male body		 M060

embryo

 V041

embryo

 V056

head

 V049

head
.............................................................TAATCTCAATTTGTAAATGTGAG......................................................................................................... 23 0 1 36176.00 36176 30503 3116 1186 492 617 262
.............................................................TAATCTCAATTTGTAAATGTGA.......................................................................................................... 22 0 1 13813.00 13813 12180 201 1344 21 46 21
............................................................................................................CACTTTGCAATTGGAGATTGCT........................................................... 22 0 1 5389.00 5389 173 3614 909 494 123 76
..............................................................AATCTCAATTTGTAAATGTGAG......................................................................................................... 22 0 1 2574.00 2574 2559 5 7 1 0 2
..............................................................AATCTCAATTTGTAAATGTGA.......................................................................................................... 21 0 1 1070.00 1070 1052 1 17 0 0 0
.............................................................TAATCTCAATTTGTAAATGTG........................................................................................................... 21 0 1 858.00 858 833 7 17 0 1 0
.............................................................TAATCTCAATTTGTAAATGTGAGT........................................................................................................ 24 1 1 552.00 552 282 204 37 0 20 9
...........................................................................................................TCACTTTGCAATTGGAGATTGCT........................................................... 23 0 1 456.00 456 15 338 60 30 10 3
.............................................................TAATCTCAATTTGTAAATGTGAGA........................................................................................................ 24 1 1 412.00 412 331 7 71 2 1 0
.............................................................TAATCTCAATTTGTAAATGTGAGC........................................................................................................ 24 0 1 354.00 354 162 102 77 6 6 1
............................................................................................................CACTTTGCAATTGGAGATTGCC........................................................... 22 1 1 259.00 259 0 1 257 1 0 0
...........................................................................................................TCACTTTGCAATTGGAGATTGC............................................................ 22 0 1 208.00 208 22 55 111 17 2 1
............................................................................................................CACTTTGCAATTGGAGATTGC............................................................ 21 0 1 190.00 190 17 37 114 13 7 2
............................................................................................................CACTTTGCAATTGGGGATTGCT........................................................... 22 1 1 182.00 182 9 137 8 1 15 12
.............................................................TAATCTCAATTTGTAAATGT............................................................................................................ 20 0 1 165.00 165 142 16 4 0 3 0
.............................................................TAATCTCAATTGGTAAATGTGAG......................................................................................................... 23 1 1 158.00 158 157 0 0 0 0 1
...........................................................................................................TCACTTTGCAATTGGAGATTG............................................................. 21 0 1 123.00 123 20 95 1 5 2 0
............................................................CTAATCTCAATTTGTAAATGTGAG......................................................................................................... 24 1 1 102.00 102 86 0 16 0 0 0
...............................................................ATCTCAATTTGTAAATGTGAG......................................................................................................... 21 0 1 96.00 96 93 1 2 0 0 0
.............................................................TAATCTCAATTTGTAAATG............................................................................................................. 19 0 1 90.00 90 22 0 68 0 0 0
.............................................................TGATCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 88.00 88 1 0 87 0 0 0
....................................................................................CGATTTTTAACTATTTGACGCACT................................................................................. 24 0 1 84.00 84 15 7 59 1 1 1
............................................................TTAATCTCAATTTGTAAATGTGAG......................................................................................................... 24 0 1 71.00 71 67 2 0 1 1 0
.............................................................TAATCTCAATTAGTAAATGTGAG......................................................................................................... 23 1 1 66.00 66 66 0 0 0 0 0
...............................................................ATCTCAATTTGTAAATGTGA.......................................................................................................... 20 0 1 62.00 62 60 0 2 0 0 0
............................................................TTAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 0 1 62.00 62 37 0 25 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAC......................................................................................................... 23 1 1 62.00 62 2 0 59 0 1 0
.............................................................TAATCTCAATTGGTAAATGTGA.......................................................................................................... 22 1 1 60.00 60 60 0 0 0 0 0
............................................................CTAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 1 1 56.00 56 32 0 24 0 0 0
............................................................ATAATCTCAATTTGTAAATGTGAG......................................................................................................... 24 1 1 55.00 55 55 0 0 0 0 0
..............................................................AATCTCAATTTGTAAATGTG........................................................................................................... 20 0 1 53.00 53 53 0 0 0 0 0
............................................................................................................CGCTTTGCAATTGGAGATTGCT........................................................... 22 1 1 53.00 53 0 1 50 2 0 0
.............................................................TAATCTCAATTTGTAAATGTGAA......................................................................................................... 23 1 1 46.00 46 41 3 0 0 2 0
............................................................................................................CAATTTGCAATTGGAGATTGCT........................................................... 22 1 1 46.00 46 0 1 44 1 0 0
.............................................................TGATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 45.00 45 5 0 38 0 1 1
.............................................................................................................ACTTTGCAATTGGAGATTGCT........................................................... 21 0 1 43.00 43 14 12 14 2 0 1
............................................................GTAATCTCAATTTGTAAATGTGAG......................................................................................................... 24 1 1 40.00 40 40 0 0 0 0 0
.............................................................TAATCTCAATTTGTAAATGTTAG......................................................................................................... 23 1 1 35.00 35 8 1 3 3 6 14
...........................................................................................................TCACTTTGCAATTGGGGATTGCT........................................................... 23 1 1 32.00 32 2 25 0 0 4 1
............................................................................................................CACTTTGCAATTGGAGATTGCTT.......................................................... 23 1 1 31.00 31 9 16 3 1 0 2
.............................................................TAACCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 31.00 31 13 2 13 1 1 1
.............................................................TAATCTCAATTCGTAAATGTGAG......................................................................................................... 23 1 1 30.00 30 28 1 0 0 1 0
.................................................................CTCAATTTGTAAATGTGAG......................................................................................................... 19 0 1 30.00 30 24 2 0 2 2 0
.............................................................TAATCTCAATTAGTAAATGTGA.......................................................................................................... 22 1 1 28.00 28 28 0 0 0 0 0
.............................................................TAATCTCAATTTGTAAATGCGAG......................................................................................................... 23 1 1 27.00 27 18 6 2 0 1 0
..............................................................AATCTCAATTTGTAAATGTGAGC........................................................................................................ 23 0 1 26.00 26 16 1 9 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGGG......................................................................................................... 23 1 1 26.00 26 21 2 0 1 2 0
............................................................................................................CGCTTTGCAATTGGAGATTGCC........................................................... 22 2 1 25.00 25 0 0 25 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTG............................................................. 20 0 1 25.00 25 2 22 0 1 0 0
..............................................................AATCTCAATTTGTAAATGTGAGT........................................................................................................ 23 1 1 24.00 24 16 4 4 0 0 0
.................................................................CTCAATTTGTAAATGTGA.......................................................................................................... 18 0 1 24.00 24 15 0 9 0 0 0
.............................................................TAATCTCAATTTGTAGATGTGAG......................................................................................................... 23 1 1 23.00 23 19 1 0 0 1 2
...........................................................................................................TCACTTTGCAATTGGAGATTGCC........................................................... 23 1 1 23.00 23 0 1 22 0 0 0
............................................................................................................CACCTTGCAATTGGAGATTGCT........................................................... 22 1 1 23.00 23 0 7 14 0 1 1
..............................................................................................................CTTTGCAATTGGAGATTGCT........................................................... 20 0 1 23.00 23 3 3 16 1 0 0
.............................................................TAACCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 19.00 19 3 0 16 0 0 0
.............................................................TAATCTCAATTTGTAAATTTGAG......................................................................................................... 23 1 1 19.00 19 8 2 5 0 1 3
.............................................................TAATCTCAATTTGTAAATGTGAT......................................................................................................... 23 1 1 18.00 18 5 1 2 1 2 7
....................................................................................CGATTTTTAACTATTTGACGCACC................................................................................. 24 1 1 18.00 18 0 0 18 0 0 0
...........................................................................................................TCACTTTGCAATTGGAGATTGT............................................................ 22 1 1 18.00 18 3 12 1 2 0 0
................................................................TCTCAATTTGTAAATGTGAG......................................................................................................... 20 0 1 17.00 17 17 0 0 0 0 0
.............................................................TAGTCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 17.00 17 13 1 2 0 1 0
.............................................................TAATCTCAATTTGTAAATGTGT.......................................................................................................... 22 1 1 17.00 17 4 10 0 0 2 1
.............................................................TAAGCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 17.00 17 0 0 14 0 3 0
............................................................................................................CACTTTGCAACTGGAGATTGCT........................................................... 22 1 1 17.00 17 0 2 8 2 1 4
.............................................................TAATCTCAATTTGTAAATGTGCG......................................................................................................... 23 1 1 15.00 15 4 2 3 3 1 2
.............................................................TAATCTCAATTTGTAAATGTAAG......................................................................................................... 23 1 1 15.00 15 8 2 1 0 4 0
.............................................................TAATCTCAATTTGTAAATGTGAGTT....................................................................................................... 25 2 1 14.00 14 10 3 1 0 0 0
.............................................................CAATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 14.00 14 6 2 5 1 0 0
...........................................................................................................TCACTTTGCAATTGGGGATTG............................................................. 21 1 1 14.00 14 8 3 0 0 2 1
..................................................................TCAATTTGTAAATGTGAG......................................................................................................... 18 0 1 14.00 14 13 0 1 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAGTC....................................................................................................... 25 2 1 14.00 14 2 11 0 0 1 0
.............................................................TAATCTCAATTTTTAAATGTGAG......................................................................................................... 23 1 1 14.00 14 10 1 0 1 2 0
..............................................................AATCTCAATTTGTAAATGTGAGA........................................................................................................ 23 1 1 13.00 13 13 0 0 0 0 0
............................................................................................................CACTTTTCAATTGGAGATTGCT........................................................... 22 1 1 13.00 13 3 5 4 1 0 0
.............................................................TACTCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 13.00 13 0 0 13 0 0 0
.............................................................TAATCTCAATTTGAAAATGTGAG......................................................................................................... 23 1 1 12.00 12 6 1 2 1 2 0
.............................................................TAATCTCAACTTGTAAATGTGAG......................................................................................................... 23 1 1 12.00 12 8 1 1 1 1 0
....................................................................................CTATTTTTAACTATTTGACGCACT................................................................................. 24 1 1 12.00 12 0 0 12 0 0 0
................................................................TCTCAATTTGTAAATGTGA.......................................................................................................... 19 0 1 12.00 12 12 0 0 0 0 0
............................................................................................................CACGTTGCAATTGGAGATTGCT........................................................... 22 1 1 12.00 12 0 1 10 0 1 0
.............................................................TAATCTCAATTTGTAAATGGGAG......................................................................................................... 23 1 1 12.00 12 10 0 2 0 0 0
.............................................................TAATCTCAGTTTGTAAATGTGAG......................................................................................................... 23 1 1 12.00 12 7 1 0 1 2 1
............................................................................................................CTCTTTGCAATTGGAGATTGCT........................................................... 22 1 1 11.00 11 0 0 11 0 0 0
............................................................................................................TACTTTGCAATTGGAGATTGCT........................................................... 22 1 1 11.00 11 0 3 6 1 1 0
.............................................................TAATCTCCATTTGTAAATGTGAG......................................................................................................... 23 1 1 11.00 11 0 1 8 1 0 1
.............................................................TAAGCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 11.00 11 0 0 11 0 0 0
...........................................................ATTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 0 1 11.00 11 11 0 0 0 0 0
............................................................................................................CACTTTGAAATTGGAGATTGCT........................................................... 22 1 1 11.00 11 0 3 8 0 0 0
.............................................................TAAACTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 11.00 11 2 0 9 0 0 0
.............................................................TTATCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 11.00 11 0 0 11 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTGCTC.......................................................... 23 0 1 11.00 11 0 5 6 0 0 0
.............................................................TAATATCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 11.00 11 0 1 0 6 3 1
.............................................................TAAACTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 10.00 10 0 0 9 0 1 0
.............................................................TAATCTCAATTTGTAAATGTGG.......................................................................................................... 22 1 1 10.00 10 7 0 3 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGTG......................................................................................................... 23 1 1 10.00 10 6 0 1 2 1 0
............................................................ATAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
.............................................................TAATCTCAATTTGTAAATGCGA.......................................................................................................... 22 1 1 10.00 10 7 0 3 0 0 0
.............................................................TAATCTCAATTTGTAAATATGA.......................................................................................................... 22 1 1 10.00 10 7 0 3 0 0 0
.............................................................GAATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 10.00 10 6 0 3 0 0 1
...........................................................................................................CCACTTTGCAATTGGAGATTGCT........................................................... 23 1 1 10.00 10 0 1 9 0 0 0
.............................................................TAATCTCAATGTGTAAATGTGAG......................................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
...........................................................................................................TGACTTTGCAATTGGAGATTGC............................................................ 22 1 1 9.00 9 0 0 9 0 0 0
............................................................................................................CACTTTGCAATTGGAGCTTGCT........................................................... 22 1 1 9.00 9 1 0 0 4 0 4
............................................................GTAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 1 1 9.00 9 9 0 0 0 0 0
.............................................................TAATCGCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 9.00 9 2 0 2 0 4 1
.............................................................AAATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 9.00 9 6 0 1 0 1 1
............................................................TTAATCTCAATTTGTAAATGTG........................................................................................................... 22 0 1 9.00 9 8 0 1 0 0 0
...........................................................AGTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 1 1 8.00 8 8 0 0 0 0 0
.............................................................GAATCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 8.00 8 5 0 3 0 0 0
.............................................................TAATCTCAATCTGTAAATGTGA.......................................................................................................... 22 1 1 8.00 8 6 0 2 0 0 0
.............................................................TAATCCCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 8.00 8 4 2 0 1 1 0
.............................................................TAATCTCAATTTGTAAGTGTGAG......................................................................................................... 23 1 1 8.00 8 4 2 0 0 2 0
............................................................................................................CACTTTGCAATTGGAGATT.............................................................. 19 0 1 8.00 8 5 3 0 0 0 0
.............................................................TAATCTCAATTTGTAAATTTGA.......................................................................................................... 22 1 1 8.00 8 5 0 3 0 0 0
.............................................................TAATTTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 8.00 8 4 1 3 0 0 0
.............................................................TAATCTCAATTTGTCAATGTGAG......................................................................................................... 23 1 1 8.00 8 1 0 2 2 0 3
.............................................................TAATCTCGATTTGTAAATGTGAG......................................................................................................... 23 1 1 8.00 8 4 1 0 1 1 1
...........................................................GTTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 1 1 8.00 8 8 0 0 0 0 0
.............................................................TAATCTCAATTTGTAAATATGAG......................................................................................................... 23 1 1 8.00 8 6 1 1 0 0 0
.............................................................TAATCTCAATTTGTAAATGAGAG......................................................................................................... 23 1 1 8.00 8 5 1 1 1 0 0
.............................................................TAATCTCAATTTGCAAATGTGAG......................................................................................................... 23 1 1 8.00 8 4 1 1 1 1 0
.............................................................TAATCTCAATTTTTAAATGTGA.......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.............................................................TAATCTCAATCTGTAAATGTGAG......................................................................................................... 23 1 1 7.00 7 5 1 0 1 0 0
.............................................................TAATCTCAATTCGTAAATGTGA.......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.............................................................................................................ACTTTGCAATTGGAGATTGCTT.......................................................... 22 1 1 7.00 7 2 2 3 0 0 0
.............................................................TAATCTCAATTTGTAGATGTGA.......................................................................................................... 22 1 1 7.00 7 6 0 1 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTTCT........................................................... 22 1 1 7.00 7 0 5 0 0 1 1
.............................................................TAATCTCAATTTGTAAACGTGAG......................................................................................................... 23 1 1 7.00 7 5 0 0 0 1 1
............................................................................................................CACTTTGCAATTGGAGATTGTT........................................................... 22 1 1 7.00 7 0 4 3 0 0 0
...........................................................................................................TCACTTTGCAATTGGAGATT.............................................................. 20 0 1 7.00 7 1 6 0 0 0 0
..............................................................AATCTCAATTTGTAAATGT............................................................................................................ 19 0 1 7.00 7 7 0 0 0 0 0
...........................................................CTTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 1 1 7.00 7 7 0 0 0 0 0
..........................................................AATTAATCTCAATTTGTAAATGTGAG......................................................................................................... 26 1 1 7.00 7 7 0 0 0 0 0
..............................................................AATCTCAATTTATAAATGTGA.......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
..............................................................AATCTCAATTTATAAATGTGAG......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
...........................................................................................................TCACTTTGCAATTGGGGATTGC............................................................ 22 1 1 7.00 7 3 2 2 0 0 0
...............................................................ATCTCAATTTGTAAATGTG........................................................................................................... 19 0 1 7.00 7 7 0 0 0 0 0
............................................................................................................CACTTTGCAATTCGAGATTGCT........................................................... 22 1 1 7.00 7 0 2 3 2 0 0
.............................................................TAATCTCAATTTGAAAATGTGA.......................................................................................................... 22 1 1 7.00 7 4 0 2 0 1 0
.............................................................CAATCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 6.00 6 2 0 4 0 0 0
.............................................................TAATCTAAATTTGTAAATGTGAG......................................................................................................... 23 1 1 6.00 6 1 2 0 2 1 0
.............................................................TAATCTCAATTTGTAAATCTGAG......................................................................................................... 23 1 1 6.00 6 3 1 1 0 1 0
..............................................................................................................CTTTGCAATTGGAGATTGCC........................................................... 20 1 1 6.00 6 0 0 6 0 0 0
.............................................................TAATCTCAATTTGTAAATGAGA.......................................................................................................... 22 1 1 6.00 6 5 0 1 0 0 0
............................................................................................................CACTTTGCAATTAGAGATTGCT........................................................... 22 1 1 6.00 6 0 2 2 2 0 0
.............................................................TAATCTCAATTTGTGAATGTGAG......................................................................................................... 23 1 1 6.00 6 4 0 0 1 1 0
.............................................................TAATCTCAATATGTAAATGTGAG......................................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
............................................................................................................CACTTTGCAATTGGCGATTGCT........................................................... 22 1 1 6.00 6 0 0 2 1 1 2
............................................................................................................CACTTTCCAATTGGAGATTGCT........................................................... 22 1 1 6.00 6 0 1 5 0 0 0
.............................................................TTATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 6.00 6 0 0 6 0 0 0
............................................................................................................CACTTTGCAATTGGAGGTTGCT........................................................... 22 1 1 6.00 6 0 4 0 1 1 0
.............................................................TAATCTCAATTTGTACATGTGAG......................................................................................................... 23 1 1 6.00 6 2 0 0 0 1 3
.............................................................TAATCTCAATTTGTAAATGTGAGCT....................................................................................................... 25 1 1 6.00 6 0 4 2 0 0 0
...............................................................................................................TTTGCAATTGGAGATTGCT........................................................... 19 0 1 6.00 6 1 1 4 0 0 0
............................................................................................................CAATTTGCAATTGGAGATTGC............................................................ 21 1 1 6.00 6 0 0 6 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAGG........................................................................................................ 24 1 1 6.00 6 5 0 1 0 0 0
...........................................................TTTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 1 1 6.00 6 6 0 0 0 0 0
..............................................................AATCTCAATTTGTAAATGTGAA......................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
............................................................................................................AACTTTGCAATTGGAGATTGCT........................................................... 22 1 1 6.00 6 0 3 0 2 0 1
............................................................................................................CACTTTGCAATTGGGGATTG............................................................. 20 1 1 6.00 6 5 1 0 0 0 0
............................................................................................................CACTTGGCAATTGGAGATTGCT........................................................... 22 1 1 5.00 5 0 0 1 3 1 0
.............................................................TAATCTCAATTTGTAAATGTGAAA........................................................................................................ 24 2 1 5.00 5 5 0 0 0 0 0
...........................................................................................................TCACTTTGCAATTGGAGATTGCA........................................................... 23 1 1 5.00 5 1 2 0 1 1 0
............................................................................................................CAATTTGCAATTGGAGATTGCC........................................................... 22 2 2 5.00 10 0 0 10 0 0 0
............................................................................................................CACTTTGCAATTGGATATTGCT........................................................... 22 1 1 5.00 5 0 2 3 0 0 0
...........................................................ACTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 1 1 5.00 5 5 0 0 0 0 0
.............................................................TGATCTCAATTTGTAAATGTGAGC........................................................................................................ 24 1 1 5.00 5 0 0 5 0 0 0
............................................................................................................CACTTTGCAATTTGAGATTGCT........................................................... 22 1 1 5.00 5 0 5 0 0 0 0
.............................................................TAATCTCAATTTGTAAATGAG........................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
.............................................................TAATCTCACTTTGTAAATGTGAG......................................................................................................... 23 1 1 5.00 5 0 0 0 1 1 3
...........................................................................................................TCACTTTGCAATTGGAGATTGA............................................................ 22 1 1 5.00 5 1 3 0 1 0 0
.............................................................TAATCTCAATTTGTAAATGGGA.......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
.............................................................TAATCTCAATTAGTAAATGTG........................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
.............................................................AAATCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 5.00 5 3 0 2 0 0 0
.........................................CTCTTATCTGCAGCATTGAT................................................................................................................................ 20 0 1 4.00 4 0 2 0 0 1 1
.............................................................................................................ACTTTGCAATTGGAGATTGCTC.......................................................... 22 0 1 4.00 4 0 2 2 0 0 0
.............................................................TAATCTCAATTTGGAAATGTGA.......................................................................................................... 22 1 1 4.00 4 1 0 2 0 1 0
.............................................................TAATCTCAATTTGTACATGTGA.......................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
............................................................................................................CACTTTGCACTTGGAGATTGCT........................................................... 22 1 1 4.00 4 0 0 0 2 0 2
..............................................................................................................CGTTGCAATTGGAGATTGCT........................................................... 20 1 1 4.00 4 0 0 4 0 0 0
............................................................CGAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 2 1 4.00 4 0 0 4 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTGT............................................................ 21 1 1 4.00 4 1 2 1 0 0 0
...........................................................GCTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 2 1 4.00 4 4 0 0 0 0 0
............................................................................................................CACTTTACAATTGGAGATTGCT........................................................... 22 1 1 4.00 4 0 3 1 0 0 0
...........................................................................................................CCACTTTGCAATTGGAGATTGCC........................................................... 23 2 1 4.00 4 0 0 4 0 0 0
............................................................................................................CACATTGCAATTGGAGATTGCT........................................................... 22 1 1 4.00 4 0 1 3 0 0 0
.............................................................TAATCTCAATTTGTATATGTGAG......................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
............................................................................................................CACTTTGCAATTGTAGATTGCT........................................................... 22 1 1 4.00 4 0 3 0 1 0 0
.............................................................TAATCTCAATTTGTAAAT.............................................................................................................. 18 0 1 4.00 4 3 0 1 0 0 0
...........................................................TCTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 2 1 4.00 4 1 1 2 0 0 0
...........................................................................................................TCACTTTGCAATTGGAGATTGTT........................................................... 23 1 1 4.00 4 0 3 0 0 1 0
............................................................CTAATCTCAATTTGTAAATGTGAGA........................................................................................................ 25 2 1 4.00 4 0 0 4 0 0 0
............................................................................................................CACTTTGCAATTGGAGAGTGCT........................................................... 22 1 1 4.00 4 0 1 0 1 1 1
.............................................................TAATCTCAATTGGTAAATGTG........................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTGCTA.......................................................... 23 1 1 4.00 4 1 2 1 0 0 0
.............................................................TAATCTCAAATTGTAAATGTGA.......................................................................................................... 22 1 1 4.00 4 2 0 2 0 0 0
.............................................................TAATCTCAATTTGTAAATGTCAG......................................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
............................................................................................................CACCTTGCAATTGGAGATTGC............................................................ 21 1 1 4.00 4 0 0 4 0 0 0
...........................................................................................................TCACTTTGCAATTGGAGATTGCTT.......................................................... 24 1 1 4.00 4 1 3 0 0 0 0
...........................................................................................................TCACTTTGCAATTGGGGATTGT............................................................ 22 2 1 4.00 4 2 2 0 0 0 0
..........................................TCTTATCTGCAGCATTGAT................................................................................................................................ 19 0 1 4.00 4 1 0 2 1 0 0
.............................................................TAGTCTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
.............................................................TGATCTCAATTTGTAAATGTGAGA........................................................................................................ 24 2 1 4.00 4 0 0 4 0 0 0
.............................................................TAATGTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 4.00 4 2 1 0 0 1 0
.............................................................TACTCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 4.00 4 1 0 3 0 0 0
....................................................................................CTATTTTTAACTATTTGACGCACC................................................................................. 24 2 1 4.00 4 0 0 4 0 0 0
............................................................................................................CGCTTTGCAATTGGAGATTGC............................................................ 21 1 1 4.00 4 0 0 4 0 0 0
...........................................................AGTAATCTCAATTTGTAAATGTGA.......................................................................................................... 24 1 1 4.00 4 3 0 1 0 0 0
............................................................................................................CACTTTGCAATTGGAGACTGCT........................................................... 22 1 1 3.00 3 0 0 0 2 0 1
............................................................................................................CACTTTGCGATTGGAGATTGCT........................................................... 22 1 1 3.00 3 0 0 0 2 0 1
............................................................TGAATCTCAATTTGTAAATGTGA.......................................................................................................... 23 1 1 3.00 3 0 0 3 0 0 0
.............................................................TAATCTCAATTTGTAACTGTGAG......................................................................................................... 23 1 1 3.00 3 0 0 0 1 2 0
.............................................................TAATCTCAATATGTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.............................................................TGATCTCAATTTGTAAATGTGAC......................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
.............................................................TAATCTCAATTTGTAAATTTGAT......................................................................................................... 23 2 1 3.00 3 0 0 0 2 0 1
...........................................................................................................TCACTTTGCAATTGGAGAT............................................................... 19 0 1 3.00 3 1 2 0 0 0 0
...........................................................TCTAATCTCAATTTGTAAATGTGA.......................................................................................................... 24 2 1 3.00 3 2 0 1 0 0 0
.............................................................TAATCTTAATTTGTAAATGTGAG......................................................................................................... 23 1 1 3.00 3 1 0 0 0 2 0
.............................................................TAATCTCAATTGGTAAATGTGAGA........................................................................................................ 24 2 1 3.00 3 3 0 0 0 0 0
.............................................................TAATCTCAATGTGTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.............................................................TAATCTCAATTTCTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...............................................................ATCTCAATTTGTAAATGTGAGT........................................................................................................ 22 1 1 3.00 3 2 0 1 0 0 0
.............................................................TTATCTCAATTTGTAAATGTGAC......................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAGCG....................................................................................................... 25 0 1 3.00 3 2 1 0 0 0 0
...........................................................CTTAATCTCAATTTGTAAATGTGA.......................................................................................................... 24 1 1 3.00 3 1 0 2 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTCCT........................................................... 22 1 1 3.00 3 0 3 0 0 0 0
.............................................................TGATCTCAATTTGTAAATG............................................................................................................. 19 1 1 3.00 3 0 0 3 0 0 0
............................................................TTAATCTCAATTTGTAAATGT............................................................................................................ 21 0 1 3.00 3 2 1 0 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTACT........................................................... 22 1 1 3.00 3 0 0 2 1 0 0
.............................................................TAATCTCAGTTTGTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0
.............................................................TAATCTCAATTTCTAAATGTGAG......................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.............................................................TCATCTCAATTTGTAAATGTGAG......................................................................................................... 23 1 1 3.00 3 2 0 0 0 0 1
...........................................................................................................TCATTTTGCAATTGGAGATTGCT........................................................... 23 1 1 3.00 3 0 0 3 0 0 0
..............................................................AATCTCAATTTTTAAATGTGA.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTGCA........................................................... 22 1 1 3.00 3 0 3 0 0 0 0
.............................................................TAATCTCCATTTGTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0
.............................................................TAATCTCAATTGGTAAATGTGAGC........................................................................................................ 24 1 1 3.00 3 3 0 0 0 0 0
.............................................................TAATCTCAATTTATAAATGTGAG......................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..............................................................................................................CTTTGCAATTGGAGATTGC............................................................ 19 0 1 3.00 3 1 0 2 0 0 0
.............................................................TAATATCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 3.00 3 2 0 0 0 1 0
.............................................................TAATCTCAATTTGTAAATGTGC.......................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0
..........................................................................................................CTCACTTTGCAATTGGAGATTGC............................................................ 23 0 1 3.00 3 0 1 2 0 0 0
..............................................................AATCTCAATTTGTAAATG............................................................................................................. 18 0 1 3.00 3 1 0 2 0 0 0
............................................................................................................CACTTTGTAATTGGAGATTGCT........................................................... 22 1 1 3.00 3 0 1 0 2 0 0
...........................................................TGTAATCTCAATTTGTAAATGTGAG......................................................................................................... 25 2 1 3.00 3 3 0 0 0 0 0
............................................................CTAATCTCAATTTGTAAATG............................................................................................................. 20 1 1 3.00 3 0 0 3 0 0 0
........................................................................................................CACTCACTTTGCAATTGGAGATT.............................................................. 23 0 1 3.00 3 2 0 1 0 0 0
............................................................................................................CACTTTGCAATCGGAGATTGCT........................................................... 22 1 1 3.00 3 0 0 2 1 0 0
................................................................................................................TTGCAATTGGAGATTGCT........................................................... 18 0 1 3.00 3 0 1 2 0 0 0
........................................................................................................CACTCACTTTGCAATTGGAGATTGCT........................................................... 26 0 1 3.00 3 0 3 0 0 0 0
................................................................TCTCAATTTGTAAATGTGAGCG....................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0
.............................................................................................................ACTTTGCAATTGGAGATTGCC........................................................... 21 1 1 3.00 3 0 0 3 0 0 0
.............................................................TAATCTCAATTCGTAAATGTG........................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
............................................................................................................CCCTTTGCAATTGGAGATTGCT........................................................... 22 1 1 3.00 3 0 2 0 1 0 0
............................................................................................................CACTTTGCAATTGGAGAT............................................................... 18 0 1 3.00 3 2 0 1 0 0 0
.............................................................TAATCTTAATTTGTAAATGTGA.......................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..................................................................TCAATTTGTAAATGTGAGC........................................................................................................ 19 0 1 2.00 2 1 0 1 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTTC............................................................ 21 1 1 2.00 2 0 2 0 0 0 0
..........................................................TAATAATCTCAATTTGTAAATGTGAG......................................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
............................................................TTAATCTCAATTTGTAAATG............................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0
.........................................................CAAATAATCTCAATTTGTAAATGTGAG......................................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0
............................................................................................................CACTTCGCAATTGGAGATTGCT........................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.............................................................TAAGCTCAATTTGTAAATGTGAGT........................................................................................................ 24 2 1 2.00 2 0 0 2 0 0 0
................................................................TCTCAATTTGTAAATGTGAGC........................................................................................................ 21 0 1 2.00 2 1 0 1 0 0 0
...........................................................ATTAATCTCAATTTGTAAATGTGA.......................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0
............................................................CGAATCTCAATTTGTAAATGTGAG......................................................................................................... 24 2 1 2.00 2 0 0 2 0 0 0
..............................................................AATCTCAATTTGTAAATGTGGG......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................TAATCTCGATTTGTAAATGTGA.......................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.............................................................TAATCTCAACTTGTAAATGTGA.......................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
...........................................................................................................TCATTTTGCAATTGGAGATTGC............................................................ 22 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTT............................................................. 20 1 1 2.00 2 1 1 0 0 0 0
.............................................................TAGTCTCAATTTGTAAATGTG........................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
........................................................CCGAGTAATCTCAATTTGTAAATGTGAG......................................................................................................... 28 3 1 2.00 2 2 0 0 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTC............................................................. 20 1 1 2.00 2 0 2 0 0 0 0
.............................................................TAATCTCAATTTGTAAATCTGA.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
....................................................................................CGATTTTTAACTATTTGACGCAC.................................................................................. 23 0 1 2.00 2 0 1 1 0 0 0
............................................................................................................CACTTTCCAATTGGAGATTGCC........................................................... 22 2 1 2.00 2 0 0 2 0 0 0
.........................................................TAACTAATCTCAATTTGTAAATGTGAG......................................................................................................... 27 2 1 2.00 2 2 0 0 0 0 0
.............................................................TAATTTCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................CACTTTGCAATTGGAGATTGCG........................................................... 22 1 1 2.00 2 0 0 0 2 0 0
...........................................................................................................TGACTTTGCAATTGGAGATTGCC........................................................... 23 2 1 2.00 2 0 0 2 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAAT........................................................................................................ 24 2 1 2.00 2 1 1 0 0 0 0
............................................................TTAATCTCAATTTGTAAATGTGAGA........................................................................................................ 25 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................................TCACTTTGCAATTGGGGATT.............................................................. 20 1 1 2.00 2 0 1 0 0 1 0
..........................................................GTGTAATCTCAATTTGTAAATGTGAG......................................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
...........................................................................................................TCACTTTGCAATTAGAGATTGCT........................................................... 23 1 1 2.00 2 0 1 1 0 0 0
............................................................................................................CACTTTGCAGTTGGAGATTGCT........................................................... 22 1 1 2.00 2 0 1 0 1 0 0
.............................................................TAATCTCAATTTGTAAATGTTA.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................GCACTCACTTTGCAATTGGAGATTGCT........................................................... 27 0 1 2.00 2 0 1 0 0 1 0
..............................................................AATCTCAATTTGTAGATGTGA.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................TAATCTCAATTTGTAAATTTTAG......................................................................................................... 23 2 1 2.00 2 0 0 0 0 1 1
............................................................TTAATCTCAATTTGTAAATGTGAGT........................................................................................................ 25 1 1 2.00 2 2 0 0 0 0 0
..............................................................AATCTCAATTTGTAAATTTGAG......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................CACTTTGCAATTGGTGATTGCT........................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.........................................................TTATTAATCTCAATTTGTAAATGTGAG......................................................................................................... 27 1 1 2.00 2 2 0 0 0 0 0
.............................................................TAAACTCAATTTGTAAATGTGAC......................................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
.............................................................TAATCTCAATTTGTAAATGGG........................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................TGCTAATCTCAATTTGTAAATGTGAG......................................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0
.............................................................TAATCGCAATTTGTAAATGTGA.......................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.............................................................TAATCTCAATTTGTAAATGTGAGAA....................................................................................................... 25 2 1 2.00 2 1 1 0 0 0 0

Anti-sense strand reads

TATATATATATAAAGATATATACCTATATAAGATACAGGTTGAGAATAGACGTCGTAACTAATTAGAGTTAAACATTTACACTCGCTAAAAATTGATAAACTGCGTGAGTGAAACGTTAACCTCTAACGAGCTCTGACGTCGTATACGGTGTAAAACATGTTTTTTTTTTTTTTTTTTTTTTTGGTTTT

********************************************..((((((..((((.(((((((...(((((((.(((((((................)))..)))))))))))...))))))).))))..))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6359:3259111-3259299 + dmo-mir-304 Known_mirbase ATATATATATATTTCTATATATGGATA----TATTCTATGTCCAACTCTTATCTGCAGCATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTTTA-ACTATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCAGCATATGCCACA--TT---TTGTACAAAAAAAAAAAAAAAAAAAAAAACCAA--------------------A-A
droVir3 scaffold_12970:2048714-2048865 + dvi-mir-304 Known_mirbase AAATATACAGCCTCCTCTATATTGTTGTTAAACT---------------TATCTGCAGCATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTTAA-AGTATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCTTATGCCACA--TA---ATGTAAAAA-----------------------------------------------
droGri2 scaffold_14853:6952260-6952405 - dgr-mir-304 Known_mirbase CT----------TTCTCTATATTGTTGTTA-ACT---------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATTATTAAG-AATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCATATGCCACA--TT---ATGTACAAAC-----T----------------A--------------------T-A
droWil2 scf2_1100000004515:1593177-1593338 - dwi-mir-304 Known_mirbase ATATATATATTATTATTTTTATTATTATTATTATTATTTTTTTTTTTTGTATCTGTAACATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTAAA-TCCATTCGATGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCATATGCCACA--TTATTT-------------------------------------------------------
dp5 XL_group1a:977388-977530 + dps-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GGCATTTGACACAC-TCACTTTGCAACTGGAGATTGCTCGAAACTGCGGCACATGCCACA--TT---ATGTACACCACACACCTAAACAACCAGTAGCCC--------------------A-A
droPer2 scaffold_56:96598-96758 + --------------------------------------------------ATATGCATGTGTGTATA-TGTACATATGTACATACATATGTATGCAAGACTGCTTGACTGAT-AAA-GGCACCGTGCACCCGTACATTTTCAATTAGCATTTAATCAAGCCAAGAACTTGCTTGGCA--TTTGATTGTCAAAAA---AAAAAAAATAAATAAATAAA--------------------T-A
droAna3 scaffold_12929:2899078-2899201 - dan-mir-304 Known_mirbase --------------------------------------------------ATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCCATTTGACGGAC-TCACTTTGCAACTGGAGATTGCTCGAGACTGCGGCATATGCCACAAAGTATTATGTACACAC-----CC---------------------------------------
droBip1 scf7180000396740:80817-80939 - --------------------------------------------------ATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCCATTTGAGGGAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACAAATTATTATGTACACAC-----C----------------------------------------
droKik1 scf7180000302696:761096-761210 + -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTCGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATTTGCCACA--T-ATTATGTA---------------------------------------------------
droFic1 scf7180000454038:646949-647106 + -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTA-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATATTATGTACACAC-----CTTAT------ATAGCCTCTCTCTATATATACATACTATAT
droEle1 scf7180000491023:1179146-1179256 - -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTCGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATT--------------------------------------------------------
droRho1 scf7180000777097:73948-74067 - -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------
droBia1 scf7180000302041:37385-37489 + ---------------------------------------------------TCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCC-TTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACA--TT-----------------------------------------------------------
droTak1 scf7180000414432:173346-173453 + -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CAATC-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TT-----------------------------------------------------------
droEug1 scf7180000409533:552259-552379 + -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------
dm3 chrX:15402987-15403107 + dme-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------
droSim2 x:14568269-14568389 + dsi-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------
droSec2 scaffold_73:137409-137529 + dse-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------
droYak3 X:9589344-9589463 + dya-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------
droEre2 scaffold_4690:11631446-11631565 - der-mir-304 Known_mirbase -------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATATATATATATTTCTATATATGGATA----TATTCTATGTCCAACTCTTATCTGCAGCATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTTTA-ACTATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCAGCATATGCCACA--TT---TTGTACAAAAAAAAAAAAAAAAAAAAAAACCAA--------------------A-ASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23136176.00361763050349226261711863116
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................22113813.0013813121802121461344201
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2215389.005389173494761239093614
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2212574.002574255912075
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................2111070.0010701052000171
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211858.00858833001177
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241552.00552282092037204
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................231456.00456153031060338
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241412.00412331201717
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................241354.0035416261677102
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................221259.0025901002571
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................221208.0020822171211155
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211190.0019017132711437
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................201165.00165142003416
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................211123.0012320502195
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21196.00969300021
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19190.009022000680
...........................................................................................................CGATTTTTA-ACTATTTGACGCAC-T...........................................................................................................24184.008415111597
................................................................TTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24171.00716710102
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20162.00626000020
................................................................TTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................23162.006237000250
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23162.00622001590
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20153.00535300000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23146.00464100203
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21143.0043142101412
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................23131.00319120316
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................19130.00302420202
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................23126.00261600091
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20125.00252100022
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................23124.00241600044
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................18124.00241500090
....................................................................................................................................TCACTTTGCAATTGGAGATTGCC.....................................................................................23123.00230000221
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................20123.00233100163
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23118.0018517221
...........................................................................................................CGATTTTTA-ACTATTTGACGCAC-C...........................................................................................................24118.00180000180
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................22118.00183200112
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................20117.00171700000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22117.00174012010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25114.00141000013
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................18114.00141300010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TC...................................................................................................................................25114.00142001011
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................23113.00131300000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................19112.00121200000
...............................................................ATTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................25111.00111100000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTC....................................................................................23111.0011000065
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................22110.0010700030
................................................................TTAATCTCAATTTGTAAATGTG..........................................................................................................................................................2219.009800010
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1918.008500003
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2217.007200032
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................2017.007100006
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1917.007700000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1917.007700000
.......................................................................................................................................CTTTGCAATTGGAGATTGCC.....................................................................................2016.006000060
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CT...................................................................................................................................2516.006000024
........................................................................................................................................TTTGCAATTGGAGATTGCT.....................................................................................1916.006100041
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2416.006500010
..................................................................AATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2216.006600000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------A....................................................................................................................................2415.005500000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCA.....................................................................................2315.005110102
....................................................................................................................................TCACTTTGCAATTGGAGATTGA......................................................................................2215.005110003
.............................................CTCTTATCTGCAGCATTGAT...............................................................................................................................................................................2014.004001102
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2214.004000022
.....................................................................................................................................CACTTTGCAATTGGAGATTGT......................................................................................2114.004100012
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................1814.004300010
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTA....................................................................................2314.004100012
....................................................................................................................................TCACTTTGCAATTGGAGATTGCTT....................................................................................2414.004100003
..............................................TCTTATCTGCAGCATTGAT...............................................................................................................................................................................1914.004110020
....................................................................................................................................TCACTTTGCAATTGGAGAT.........................................................................................1913.003100002
...................................................................ATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2213.003200010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2513.003200001
................................................................TTAATCTCAATTTGTAAATGT...........................................................................................................................................................2113.003200001
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2213.003000003
.......................................................................................................................................CTTTGCAATTGGAGATTGC......................................................................................1913.003100020
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2213.003100020
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGC......................................................................................2313.003000021
..................................................................AATCTCAATTTGTAAATG............................................................................................................................................................1813.003100020
................................................................................................................................CAC-TCACTTTGCAATTGGAGATT........................................................................................2313.003200010
.........................................................................................................................................TTGCAATTGGAGATTGCT.....................................................................................1813.003000021
................................................................................................................................CAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2613.003000003
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2213.003300000
......................................................................................................................................ACTTTGCAATTGGAGATTGCC.....................................................................................2113.003000030
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................1813.003200010
......................................................................TCAATTTGTAAATGTGAG-------------------C....................................................................................................................................1912.002100010
................................................................TTAATCTCAATTTGTAAATG............................................................................................................................................................2012.002200000
....................................................................TCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2112.002100010
...............................................................ATTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2412.002000020
.....................................................................................................................................CACTTTGCAATTGGAGATTT.......................................................................................2012.002100001
.....................................................................................................................................CACTTTGCAATTGGAGATTC.......................................................................................2012.002000002
...........................................................................................................CGATTTTTA-ACTATTTGACGCAC-............................................................................................................2312.002000011
.....................................................................................................................................CACTTTGCAATTGGAGATTGCG.....................................................................................2212.002020000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------T....................................................................................................................................2412.002100001
................................................................TTAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2512.002200000
...............................................................................................................................GCAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2712.002000101
................................................................TTAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2512.002200000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AA...................................................................................................................................2512.002100001
droVir3
AAATATACAGCCTCCTCTATATTGTTGTTAAACT---------------TATCTGCAGCATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTTAA-AGTATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCTTATGCCACA--TA---ATGTAAAAA-----------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................231640620.00640620341744994762974787112984366252131041384030711342381419251625717116594889355414552127972405821752850821296174590215649827397991953062311622993247200000000000000000111689451561010128647917023324118515226719712112
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................22153247.00532474926114951494017616601340004753041814092651902102644297885769510711028647110241323911170932711686397010000000000000112382282116090681603291901107015711312335
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................22124961.0024961163350778125037232777264059011914948836553185798116638161102325187127068847415981135925211054340200011122426307211371988710530693900113613180631028810000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2416971.00697132289558259321844120007043286436471434412174106772201836531277350120413651651848520000000000000000000121700584000130124200000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2215035.0050350039331382011000011817217110622147446155261912760631010300000000000000000000043045000000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................2313801.003801864775558113822101201001104216109260223094252327481393011283950357000157481000000000000000001217152480711000127811131400000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2412311.002311434658327561320003127142481211153755525596026129594370528431110730000000000000000011063011971110710101111300100
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................2112298.00229832878236000000001315112210721118215112616211332127415115000013700000000000000000000370142801057339600000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2412170.00217000623818700300001275744331111029255964323419188628041010011114000000000000000000002110251900021443100010
...........................................................................................................CGATTTTAA-AGTATTTGACGCAC-T...........................................................................................................2411616.00161611158101000000010000040011420147822630600001200010856116106811114553010202100030027222111019417800000
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................2111163.0011631010621000000000000021102200123191353300000002000000000000000000000005800000000000000
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................201901.0090122616133820000000665513917941211101113651633915015210008146000000000000000000013600310012021100000
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211885.00885013081864411030000211100442230591513444222830380000158600000000000000001135334011100044442718462600000
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................181691.00691001609556102100023072028032123146643842318404701101176000000000000000000001108600000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................211676.00676231013244381101820001300102811912321670175514800001570000000000000000000025201000030382122362300000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................231638.0063800311392101000010516531228361413610512844150081022230000000000000000000002608320000101000100
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................191561.0056100560624113100002104122418227166261254102247302001011350000000000000000000000225800000000000000
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................231528.00528009268300300008102151288615223741108263328380790000536000000000000000000015103300001000000000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................211358.003580018900000000000100111101058943147104301000011000000000000000000000000300000000000000
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................191354.00354322371100000000011421000244531427102001100014000000000002010011100001300147352917452800000
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................221350.003502014122540010000310201122051338225313620100000244000000000000000000001190400001042211100000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................221343.003430011013052330000110111133112257324129840210000327000000000000000000000404300010000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGA..................................................................................................................................231228.002280042011400100000012001003021522638118504000108000000000000000000000003400000000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................211227.002270033203712161700000101011310711107749060000432000000000110000000001808200011000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TC...................................................................................................................................251216.0021600410141200000000000015001001029302454090000130000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................231148.00148004071813100000070031018216122438170700001113000000000000000000000302000001101000000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................221143.0014300801800000000402000434200011033616090000316000000000000000000006700000000000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAGATT........................................................................................231126.0012600101625010000000001140050631926516050000111000000000000000000000004000020001000000
................................................................TTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................241114.0011400820100000000000000000000122493401000022000000000000000000000000100000000000000
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................181108.001080110110000000025120200012151419918060000080000000001000000000000061000000100000000
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................181107.0010700310010000000004000010103023121681602000003000000000000000000000001200010000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................221105.00105112006710000000000006001010171961706000007000000000000000000000202000014104200000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................201104.0010400180000001000010000010200254132382301000011000000000000000000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25197.00970010005001000001101100141132461361703000006000000000000000000000303300000001000000
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23197.00971205021001000000000120318330410141801001005000000000000000000013202000010000200000
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20191.009100880000000000000000000000000200000000000000000000000000000000001000000000000000
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................22183.0083109710100000000000000000001002212000000000000000000000000102000011000758211900000
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20182.008200672000000000000000000000020121700000000000000000000000000000000000000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCC.....................................................................................23177.0077111117300000000000209011000027215070000015000000000000000000000100000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................22169.006920013011200000000000001110200006104020000111000000000000000000010100000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTC....................................................................................23162.0062001001020000000001100120020000352201000003000000000000000000000001000005305300000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGAT.................................................................................................................................24161.0061001002100000000011001110210011841600000014000000000000000000000020000000002100000
..............................AACT---------------TATCTGCAGCATTGAT...............................................................................................................................................................................20154.005400311010010000000000010000401263600000003000000000000000000000000200022230100000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................22152.00520010193221100000000020031245100502000006000000000000000000000100000000000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................23151.0051004110000200000000000200011331341100000003000000000000000000000000200000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCTT....................................................................................24146.00460000031001000001000131200000172707000025000000000000000000000100100000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20146.00460050112000200000010050020011131302000002000000000000100000001301000004100200000
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................20145.004500700104000100000000031200100000303000054000000000000000000010000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CT...................................................................................................................................25144.004400001200010000100100200000013831203000005000000000000000000000000000001000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................23142.004200260000000000000000000000021061200000002000000000000000000010001000000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCTC....................................................................................24137.003700000400000000000000400100002421301000004000000000000000000000100000000001000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................23136.003600290000000000000000000000010110001000000000000000000000000000003000000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................20133.00330040011000000111000000000000044405000007000000000000000000000000000000000000000
.................................................................................................................................AC-TCACTTTGCAATTGGAGATT........................................................................................22132.00320001041001000001000030001011133600000014000000000000000000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------T....................................................................................................................................24131.00310020000101100011000032520002012003000004000000000000000000000000000000000000000
................................................................TTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................23131.003100240000000000000000000000001122100000000000000000000000000000000000000000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................21131.00311010010000000010041010101100060500000005000000000000000000002000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CC...................................................................................................................................25130.003000000000000000000000100000003104802000001000000000000000000000000100000000000000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................19130.003000130000000000001101010000111050300000002000000000000000000000000000000000000000
...............................ACT---------------TATCTGCAGCATTGAT...............................................................................................................................................................................19129.00290010000010000000000000110010403300000003000000000000000000010000000034003000000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------A....................................................................................................................................24129.00290030010000000010010000001000671501000000000000000000000000000001000000010000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................24125.00252050000000000001000001000002241510000000000000000000000000000001000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AA...................................................................................................................................25124.00240010000000000000110002000010321400000000000000000000000000000005300000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................19122.00220000140000000000000010030000100102000003000000000000000000000000600000000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAGAT.........................................................................................22119.00190010000000000000000060000000160200000003000000000000000000000000000000000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................24118.00180000011000000000110000000021222401000000000000000000000000000000000000000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................22118.00180000040000000000000041010000110300000001000000000000000000000100000000001000000
...............................................................ATTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................25118.001800120000000000000001000000020020100000000000000000000000000000000000000000000000
........................................................................................................................................TTTGCAATTGGAGATTGCT.....................................................................................19117.00170050232000000000000000001000210100000000000000000000000000000000000000000000000
.........................................................................................................................................TTGCAATTGGAGATTGCT.....................................................................................18117.00170000081001000000000010010000000100000004000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTA....................................................................................23116.00160000121000000000000120001010200100000022000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................18115.00150010010000000000000000000000000100000000000000000000000000010000000031103300000
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................19115.00150000000001000000000000000000010000000000000000000000000000000000000004050400000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TCC..................................................................................................................................26114.00140000000000000000000000000000411800000000000000000000000000000000000000000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAGA..........................................................................................21112.00120000000000000000000010000000330301000001000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................22112.00120000001000000010000010000000001400000010000000000000000000000300000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TTT..................................................................................................................................26112.00120000010000000010100001000020111200000001000000000000000000000000000000000000000
...........................................................................................................CGATTTTAA-AGTATTTGACGCAC-............................................................................................................23111.00110000000000000000000000000010311000000000000000000000000000000000000001220000000
.................................................................TAATCTCAATTTGTAAATGTGCT-------------------.....................................................................................................................................23111.00110000000000000000000000010000006001000003000000000000000000000000000000000000000
.............................AAACT---------------TATCTGCAGCATTGAT...............................................................................................................................................................................21111.00110000001000000000000010100000301000000001000000000000000000000000000000000300000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................24110.00100000011000000000000000000010010100000001000000000000000000000400000000000000000
.................................................................TAATCTCAATTTGTAAATGTC..........................................................................................................................................................21110.00100000001000000000000000000000112102000002000000000000000000000000000000000000000
...............................................................ATTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2419.0090050000000000000000000000000101100000000000000000000001000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2519.0090000000000000000000000000010120400000001000000000000000000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CTT..................................................................................................................................2619.0090000000100000000000000100000013201000000000000000000000000000000000000000000000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2319.0090000020001000000000000000000020102000001000000000000000000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2218.0080000010000000000010010020000010000000010000000000000000000001000000000000000000
.....................................................................CTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2018.0080010010000000000000000010000010002000002000000000000000000000000000000000000000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1917.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
droGri2
CT----------TTCTCTATATTGTTGTTA-ACT---------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATTATTAAG-AATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCATATGCCACA--TT---ATGTACAAAC-----T----------------A--------------------T-ASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2313375.0033753237138
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................221944.009449377
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................221424.0042451373
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................221290.002902891
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................21178.0078780
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................21147.0047461
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................24127.0027270
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21119.0019190
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................23117.0017116
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20110.0010100
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................24110.0010100
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2419.00990
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................2118.00853
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1916.00660
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................2116.00633
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................1915.00550
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................2115.00523
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2314.00431
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2414.00440
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................2014.00431
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................2213.00321
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................2313.00321
...........................................................................................................CGATTATTAAG-AATTTGACGCAC-T...........................................................................................................2413.00321
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------ATT..................................................................................................................................2612.00220
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................1912.00220
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2012.00220
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2212.00220
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................2012.00211
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................2011.00110
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2311.00110
..................................................................AATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................2411.00110
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................1811.00110
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................2211.00101
...............................................................AATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2511.00110
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................2411.00101
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGA..................................................................................................................................2311.00110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------GCG..................................................................................................................................2611.00110
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------T....................................................................................................................................2411.00110
..................................................................AATCTCAATTTGTAAATGTGAG-------------------GTG..................................................................................................................................2511.00110
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................2211.00110
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................2011.00101
....................................................................................................................................TCACTTTGCAATTGGAGATTGCTT....................................................................................2411.00101
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................2311.00101
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------A....................................................................................................................................2411.00110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AT...................................................................................................................................2511.00110
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................2211.00110
....................................................................................................................................TCACTTTGCAATTGGAGATTGCG.....................................................................................2311.00101
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................2511.00110
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................1811.00110
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................2311.00101
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTTA...................................................................................2411.00110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AAC..................................................................................................................................2611.00110
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1911.00101
................................................................................................................................CAC-TCACTTTGCAATTGGAGATTT.......................................................................................2411.00110
droWil2
ATATATATATTATTATTTTTATTATTATTATTATTATTTTTTTTTTTTGTATCTGTAACATTGATTAATCTCAATTTGTAAATGTGAG-------------------CGATTTAAA-TCCATTCGATGCAC-TCACTTTGCAATTGGAGATTGCTCGAGATTGCAGCATATGCCACA--TTATTT-------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23124897.0024897361512550580201211
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2216010.00601072554624255113
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2214199.0041993115910312574404
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................2311245.0012452959297755105
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2211135.001135011211112
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211541.005417524154
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................241470.004704150827533
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211436.004360435001
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................211375.0037514554894938
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241337.003376206314648
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241166.0016641401147
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................221154.00154635335723
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211102.0010241811636
..............................................................................................................................TGCAC-TCACTTTGCAATTGGAGA..........................................................................................23176.00760154561
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................20154.00540421002
..............................................................................................................................TGCAC-TCACTTTGCAATTGGAG...........................................................................................22148.00481242183
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21146.00460161992
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21146.0046043021
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................22139.003971110101
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................19137.0037035011
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20137.0037037000
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................20132.0032122522
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20131.0031127120
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................18128.0028025111
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23124.0024016233
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................23123.0023022010
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20123.0023011831
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19120.0020911000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................20117.0017017000
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................22116.0016114010
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23113.001304090
..............................................TTGTATCTGTAACATTGAT...............................................................................................................................................................................19112.0012101100
................................................................TTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24112.0012012000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25111.0011011000
..............................................................................................................................TGCAC-TCACTTTGCAATTGGA............................................................................................21110.001008020
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23110.001012160
....................................................................................................................................TCACTTTGCAATTGGAGATTGA......................................................................................22110.001002620
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1819.00904032
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2319.00909000
...............................................................ATTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2417.00704030
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................2016.00604110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CT...................................................................................................................................2516.00601320
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................1916.00615000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................2416.00600240
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................2316.00602130
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................2216.00640200
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2416.00624000
...........................................................................................................CGATTTAAA-TCCATTCGATGCAC-T...........................................................................................................2415.00502030
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2215.00500302
..............................................................................................................................TGCAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2815.00500500
..................................................................................................................................C-TCACTTTGCAATTGGAGATTG.......................................................................................2215.00500230
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1915.00505000
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1915.00505000
..............................................................................................................................TGCAC-TCACTTTGCAATTGGAGT..........................................................................................2315.00500140
............................................TTTTGTATCTGTAACATTGAT...............................................................................................................................................................................2115.00510040
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGC......................................................................................2315.00500140
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2314.00404000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CC...................................................................................................................................2514.00431000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2314.00404000
.......................................................................CAATTTGTAAATGTGAG-------------------C....................................................................................................................................1814.00402020
................................................................TTAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2314.00404000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................2214.00401300
...............................................................ATTAATCTCAATTTGTAAATGTG..........................................................................................................................................................2314.00404000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2213.00301020
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................1813.00302010
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................1913.00311100
....................................................................................................................................TCACTTTGCAATTGGAGATTGCC.....................................................................................2313.00330000
....................................................................................................................................TCACTTTGCAATTGGAGAT.........................................................................................1913.00312000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2213.00302010
.............................................TTTGTATCTGTAACATTGAT...............................................................................................................................................................................2013.00300030
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2213.00300021
...................................................................ATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2213.00303000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCA.....................................................................................2313.00300012
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................1812.00202000
......................................................................TCAATTTGTAAATGTGAG-------------------T....................................................................................................................................1912.00201010
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTA....................................................................................2312.00200020
.....................................................................................................................................CACTTTGCAATTGGAGATTGA......................................................................................2112.00201100
.................................................................................................................................AC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2512.00200200
.................................................................TAATCTCAATTTGTAAATGA...........................................................................................................................................................2012.00202000
.....................................................................................................................................CACTTTGCAATTGGAGATTGT......................................................................................2112.00202000
...............................................................................................................................................TTGGAGATTGCTCGAGATTGC............................................................................2112.00220000
......................................................................TCAATTTGTAAATGTGAG-------------------C....................................................................................................................................1912.00202000
.......................................................................................................................................CTTTGCAATTGGAGATTGC......................................................................................1912.00202000
.........................................................................................................................................TTGCAATTGGAGATTGCT.....................................................................................1812.00200011
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------G....................................................................................................................................2412.00202000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGA..................................................................................................................................2312.00201100
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1912.00202000
...............................................................................................................................GCAC-TCACTTTGCAATTGGAGA..........................................................................................2212.00202000
...............................................................ATTAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2512.00202000
.................................................................TAATCTCAATTTGTAAATGTAG.........................................................................................................................................................2231.33404000
............................................................................................................GATTTAAA-TCCATTCGATGCAC-............................................................................................................2211.00100010
....................................................................TCTCAATTTGTAAATGTGG.........................................................................................................................................................1911.00110000
...................................................................................................................................................AGATTGCTCGAGATTGCAGCAT.......................................................................2211.00100010
................................................................................AATGTGAG-------------------CGATTTAAA-TCCATTCGATGC...............................................................................................................2911.00100100
................................................................................................................................CAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2611.00100010
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------T....................................................................................................................................2411.00100001
....................................................................................TGAG-------------------CGATTTAAA-TCCATTCG...................................................................................................................2111.00100100
.................................................................TAATCTCAATTTGTAAATGTGTT-------------------.....................................................................................................................................2311.00101000
................................................................................................................................CAC-TCACTTTGCAATTGGAGATTGCTC....................................................................................2711.00100010
dp5
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GGCATTTGACACAC-TCACTTTGCAACTGGAGATTGCTCGAAACTGCGGCACATGCCACA--TT---ATGTACACCACACACCTAAACAACCAGTAGCCC--------------------A-ASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23137033.003703373057045991747933941212302647
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................22113983.0013983201042660165842679610319619
.....................................................................................................................................CACTTTGCAACTGGAGATTGCT.....................................................................................2212896.00289638261542039115310171429325
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2212426.00242602408021011130
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................2111084.001084093283304341000
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211856.00856084325010140
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241583.00583137119245301010320
.....................................................................................................................................CACTTTGCAACTGGAGATTGC......................................................................................211563.005632187306181568820722
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241205.00205112122132226360
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................211153.001530126110101221
....................................................................................................................................TCACTTTGCAACTGGAGATTG.......................................................................................211153.001532830013301330
....................................................................................................................................TCACTTTGCAACTGGAGATTGC......................................................................................221132.00132047326260642
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................201127.001270905316100120
....................................................................................................................................TCACTTTGCAACTGGAGATTGCT.....................................................................................231119.001192437416434090
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................241113.00113088210023170
.....................................................................................................................................CACTTTGCAACTGGAGATTG.......................................................................................201108.001080710111211120
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................231105.001050671640020160
......................................................................................................................................ACTTTGCAACTGGAGATTGCT.....................................................................................21186.0086056104520000
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20170.007006701000020
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23158.005821467101000
.....................................................................................................................................CACTTTGCAACTGGAGATTGCC.....................................................................................22155.005500487000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................24154.0054019179120060
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................19145.004503700300140
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20138.003803701000000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22136.0036016030212030
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19136.00360121031000100
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23134.003402210032060
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGA..................................................................................................................................23133.0033019000010130
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................18132.003202431012010
....................................................................................................................................TCACTTTGCAACTGGAGATTGT......................................................................................22128.002801100223091
...........................................................................................................CGATT-TGA-GGCATTTGACACAC-T...........................................................................................................23128.002801911020230
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................18125.0025011000103100
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25124.002401502002050
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................20123.002302200010000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................23123.002302000000210
.................................................................................................................................AC-TCACTTTGCAACTGGAGATT........................................................................................22123.002301271100020
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................22121.002101110001260
.....................................................................................................................................CACTTTGCAACTGGAGATTGCTT....................................................................................23120.002001100016020
.....................................................................................................................................CACTTTGCAACTGGAGATT........................................................................................19119.001901500010030
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23118.00180611360010
......................................................................................................................................ACTTTGCAACTGGAGATTGC......................................................................................20116.001601100200030
................................................................ATAATCTCAATTTGTAAATGTG..........................................................................................................................................................22113.00130901000030
....................................................................................................................................TCACTTTGCAACTGGAGATT........................................................................................20112.00120600011040
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................19111.00110900000020
......................................................................................................................................ACTTTGCAACTGGAGATTG.......................................................................................1919.0090600001020
...............................................................AATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2519.0090400000050
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................2218.0080601001000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2318.0080800000000
.......................................................................................................................................CTTTGCAACTGGAGATTGCT.....................................................................................2017.0070610000000
................................................................ATAATCTCAATTTGTAAATGT...........................................................................................................................................................2116.0060401010000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2216.0060141000000
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1916.0060600000000
....................................................................................................................................TCACTTTGCAACTGGAGATTGA......................................................................................2215.0050100002020
......................................................................................................................................ACTTTGCAACTGGAGATTGCTC....................................................................................2215.0053200000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TTT..................................................................................................................................2615.0050300000020
.................................................................TAATCTCAATTTGTAAATGC...........................................................................................................................................................2015.0050050000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AT...................................................................................................................................2514.0040100000030
.........................................................................................................................................TTGCAACTGGAGATTGCT.....................................................................................1814.0040400000000
....................................................................................................................................TCACTTTGCAACTGGAGATTGCC.....................................................................................2314.0040031000000
........................................................................AATTTGTAAATGTGAG-------------------.....................................................................................................................................1614.0040000000130
..................................................................................................................................C-TCACTTTGCAACTGGAGATT........................................................................................2114.0040400000000
.......................................................................CAATTTGTAAATGTGAG-------------------.....................................................................................................................................1714.0040000000220
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2313.0030100000020
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2513.0030000000120
......................................................................TCAATTTGTAAATGTGA.........................................................................................................................................................1713.0030000000030
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AA...................................................................................................................................2513.0030000000120
.....................................................................................................................................CACTTTGCAACTGGAGATTGCA.....................................................................................2213.0030100101000
........................................................................................................................................TTTGCAACTGGAGATTGCT.....................................................................................1913.0030200001000
......................................................................................................................................ACTTTGCAACTGGAGATTGCTT....................................................................................2213.0030100002000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1913.0030201000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2313.0030110000010
....................................................................TCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2113.0030020010000
.....................................................................................................................................CACTTTGCAACTGGAGATTGCTTT...................................................................................2413.0030300000000
...........................................................................................................CGATT-TGA-GGCATTTGACA................................................................................................................1912.0020100001000
................................................................................................................................CAC-TCACTTTGCAACTGGAGAT.........................................................................................2212.0020200000000
.....................................................................CTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2112.0020200000000
...............................................................AATAATCTCAATTTGTAAATG............................................................................................................................................................2112.0020100000010
.....................................................................................................................................CACTTTGCAACTGGAGATTT.......................................................................................2012.0020000000020
.....................................................................................................................................CACTTTGCAACTGGAGATTGT......................................................................................2112.0020000000020
.................................................................TAATCTCAATTTGTAAA..............................................................................................................................................................1712.0020000000110
.....................................................................................................................................CACTTTGCAACTGGAGAT.........................................................................................1812.0020020000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2412.0020200000000
.........................................................................ATTTGTAAATGTGAG-------------------.....................................................................................................................................1512.0020000000020
.................................................................TAATCTCAATTTGTAAATGTA..........................................................................................................................................................2112.0020010000010
.....................................................................................................................................CACTTTGCAACTGGAGATTGCTC....................................................................................2312.0020200000000
................................................................ATAATCTCAATTTGTAAATGTGT.........................................................................................................................................................2311.0010000001000
......................................................................TCAATTTGTAAATGTGAG-------------------T....................................................................................................................................1911.0010100000000
droPer2
--------------------------------------------------ATATGCATGTGTGTATA-TGTACATATGTACATACATATGTATGCAAGACTGCTTGACTGAT-AAA-GGCACCGTGCACCCGTACATTTTCAATTAGCATTTAATCAAGCCAAGAACTTGCTTGGCA--TTTGATTGTCAAAAA---AAAAAAAATAAATAAATAAA--------------------T-ASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................ATGCAAGACTGCTTGACT...................................................................................................................................1811.001100000
.............................................................................................GCAAGACTGCTTGACTGAT-AAA-GGCACC.....................................................................................................................2811.001100000
droAna3
--------------------------------------------------ATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCCATTTGACGGAC-TCACTTTGCAACTGGAGATTGCTCGAGACTGCGGCATATGCCACAAAGTATTATGTACACAC-----CC---------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2315591.005591307188634648701035
.....................................................................................................................................CACTTTGCAACTGGAGATTGCT.....................................................................................2212789.00278954964281001673375
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2212112.002112154329644072157
.....................................................................................................................................CACTTTGCAACTGGAGATTG.......................................................................................201309.00309227104689
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241305.0030561313912873
.....................................................................................................................................CACTTTGCAACTGGAGATTGC......................................................................................211256.0025611993109421
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................221211.0021120601211
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211174.00174153202611
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211138.0013813430001
.....................................................................................................................................CACTTTGCAACTGGAGATT........................................................................................19190.009074000160
......................................................................................................................................ACTTTGCAACTGGAGATTGCT.....................................................................................21165.006540002167
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................20158.0058111113284
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................24141.004119150124
.....................................................................................................................................CACTTTGCAACTGGAGATTGCTT....................................................................................23141.004116100231
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23138.00380036623
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22132.00324006202
.....................................................................................................................................CACTTTGCAACTGGAGATTGCC.....................................................................................22122.00221190020
......................................................................................................................................ACTTTGCAACTGGAGATTG.......................................................................................19115.00151200012
......................................................................................................................................ACTTTGCAACTGGAGATTGC......................................................................................20113.00131001002
.....................................................................................................................................CACTTTGCAACTGGAGAT.........................................................................................18113.00131200100
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21112.00121100010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................24111.0011500015
.......................................................................................................................................CTTTGCAACTGGAGATTGCT.....................................................................................20110.0010810010
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20110.00101000000
...........................................................................................................CGATT-TGA-GCCATTTGACGGAC-T...........................................................................................................23110.0010440011
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25110.0010400222
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................1919.009270000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2319.009500112
.....................................................................................................................................CACTTTGCAACTGGAGATTGT......................................................................................2119.009700110
......................................................................................................................................ACTTTGCAACTGGAGATTGCTT....................................................................................2218.008500030
......................................................................................................................................ACTTTGCAACTGGAGATT........................................................................................1817.007700000
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1917.007500020
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2417.007400021
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................2316.006050001
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................1816.006510000
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................2215.005500000
.....................................................................................................................................CACTTTGCAACTGGAGATTGCG.....................................................................................2214.004300010
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2314.004310000
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................2014.004310000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2014.004400000
.....................................................................................................................................CACTTTGCAACTGGAGATTGCA.....................................................................................2213.003200010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2413.003300000
.............................................................................................................ATT-TGA-GCCATTTGACGGAC-T...........................................................................................................2113.003110001
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1813.003101001
...................................................................ATCTCAATTTGTAAATGT...........................................................................................................................................................1813.003030000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2312.002100001
.....................................................................................................................................CACTTTGCAACTGGAGATTGCTTT...................................................................................2412.002100100
........................................................................................................................................TTTGCAACTGGAGATTGCT.....................................................................................1912.002100010
....................................................................................................................................TCACTTTGCAACTGGAGATTG.......................................................................................2112.002200000
......................................................................................................................................ACTTTGCAACTGGAGATTGCTC....................................................................................2212.002110000
.....................................................................................................................................CACTTTGCAACTGGAGATA........................................................................................1922.004400000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2212.002020000
.....................................................................................................................................CACTTTGCAACTGGAGATTT.......................................................................................2012.002200000
.....................................................................................................................................CACTTTGCAACTGGAGATTGA......................................................................................2112.002000020
.....................................................................................................................................CACTTTGCAACTGGAGAA.........................................................................................1812.002200000
........................................................................................................................ATTTGACGGAC-TCACTTTGCAACT...............................................................................................2411.001010000
....................................................................................................................................TCACTTTGCAACTGGAGATTGCT.....................................................................................2311.001000010
................................................................ATAATCTCAATTTGTAAATGTG..........................................................................................................................................................2211.001100000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CC...................................................................................................................................2511.001100000
..............................................................................................................................CGGAC-TCACTTTGCAACTGGAGATTGCT.....................................................................................2811.001100000
...............................................................................................................................GGAC-TCACTTTGCAACTGGAGATTGCC.....................................................................................2711.001010000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2311.001100000
..................................................................AATCTCAATTTGTAAATGTGG.........................................................................................................................................................2111.001100000
droBip1
--------------------------------------------------ATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCCATTTGAGGGAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACAAATTATTATGTACACAC-----C----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTCGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATTTGCCACA--T-ATTATGTA---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTA-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATATTATGTACACAC-----CTTAT------ATAGCCTCTCTCTATATATACATACTATATSizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTCGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATT--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------TCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGATT-TGA-GCC-TTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACA--TT-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CAATC-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TT-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TAA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................231438024.00438024000031200184941200171051716696382182751422872322415112100842253917901472137941624856146101410382917199428323431576078502707106200021711868000000000000000004410433834353471941288726214592836813245411763894247221251482929559111674534045483373273144717513024329072661997594020027394734335025508715121213348621802157193175716631258196613100110058718123126274930560208594115745999024732515974212368022119021921973233425698529493169298596062560000001527304731760127750463569102591797255313715571196011163152040872862507170187000001055641412423095932134257481289830862223836851227551055358751140791723012385472107285511230138560547889852641718976259582109625173572468744671390995314295894963753683166385512694611294917203834889941795221421441224111049271085554145360140581237421105265211364543691087473745398131335191766556723827667880101752528
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................221294733.0029473300000400110010000100179121300452242344141745010582129034141444622188131504681193881686352117516312670754314131230211000000000000000005751355001009009103000133300051200010111260000111309051190611310010060101010747692521913692220252525872281436413641154154072900110674581243229625204274175116175605441120342713050466154527446019240177046381915160002119253514566170421221438131261334987151824642121682724952888805144126547000079758333973031177373116670881404969729508991538845112984130331961446390749149962725565311875882122101242991117591898114801606695898250149282142750528431539218783630162784454587736499149024614113733718671128332867206251035210157100971191646260394910282458795333981021590628379914963465164712385751829956380222474423740
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................221139744.001397440000211020102300011207324024100423838631995111413411191825515681955289116709114617028612471000834836000000000000000003528345825502684523370112321662765191486303242287442971031373952402112155271127148611801102239412243437419519813144457834415979034045817896811197193453333902300136000793612100923624661172416864212041118085701072011323348049260501412037317221020369700000081076533551416363326522080199336362340045312305414291112414015002914210556162253274464113114955512232371536081753171913460324514511025442493221138710496319126997012345542936196143767486165330104581281301382512758812166552286911595169921970281165242636174139156653552767981269448
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------ATC..................................................................................................................................26111369.0011369000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120001000076753688000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................21111340.00113400000000000000000000057111510110000000186116917742151190109218397412644900012000000000000000000222320271000000700200217120001000002850001000210000110000000002000210420041738180851654946134470000010001506100331206102243000106902137220024403250000008000000702488114432368637343939111051700003523015318401122556117175775180924815037216211113424291110114276117162215110471214963694373618151612131184633228131682997015453291512044932014224832952021529114257523616451479215120275164711616340
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2418419.0084190000000000000000010051114000000000000410749929616161516102243691670000000000000000000000025292021000000070000000040001100001033000001050000001091930010000100212003054333423176419222100000300200121901200624016012032200000258233981200019701600000002127000000710641827874211436439517101019950205500005100941928623566221931110612616244907820434479165673243432057327111539610269740243333334611230123315184374315872511924499825323217281621111612302351132224151133735217260
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................2316395.00639500000000000000000000838200200000000274014271831559931339113943579800000200000000000000000723200000001000000001000000000000000001000000000000100000000000021063940374424154421411100000000200120100120000003000002111191001021168314065000009210000002036647163110231399333970113000011707331673162213302202517422117515411042952061337112731795410225650774851112876292278316107218641375713261611927517219539145258175601525913411131195097537077552091812326110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2414734.0047340000000000000000000034600000000000011260141245405712166000000000000000000000000686447430100001500100013200000022016130100200100000101014023160010000020221074176823710040000000000058680301096612602316800000035452120000120135000003500000000011124175225105711066316234827200521787200420516740153819115013020050218386315231924514425519019432344103032172731564222713311211010000313021212632120
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................2114341.0043410000030000020010017001031500053914699310141383442212375544184300063100000000000000000188174152166000100031202000671901151301232921122049027080338079178631614015123190000051574779110300100105000336202075311021472433355638000058922060001201818000001000000000044442719438939554765631627022700001002269112346251249116519003150105311811011301218170717210704250042213144124131582225401222014000788064532148320
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................2112453.0024530000000000000000000031160000000000004754423315161861110215100000000000000000000000332100000000000000000000000000000000000000000000000000000000000000001017111815406704000000041001202001103021300000053510182200160321100000040030002003713121940211231168305000041100241160277807214311064042132202287521109861836231592250210282411587441261968335931810422872742333150133719814279234116693028070
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................2312375.00237500000000000000000000617111002000000006469531112161239834521473313721430000000000000000000000018198161011100200200000200000103191400000101000000000251281800000000201110014333313241083101000000613001131309004100201000010003154715000611920000036660000000213123214710021000833001030213103211864971569054290110013120203910819521258019381551541306141030112122132158333453011130010000200000103003034200
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................1811719.00171900000000000000000000020100034715128170000000000000010000000000000000000000000003247282600000011001000000000000000000000000000000000009201122416734000034100000101010000000000000000010114312151470021200000172000006000000000000000000013110025180000000000000000000000000000000000000002001010200000000001000000000010000000000000000000000000010000000000
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................2011570.00157000000000000000000000370200321948935102400125010202590000000100000000000000000394434360000000200000000200010000182410111705200000006108254354701021313000000610315320200100300000712072211049231101440000011246200002206000000010000001001329037108285564476015000041001200041222110460600606097820175001639310443321011331084410031031613311126243100133213211000007410235241155560
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................2111540.00154000000000000000000000111100000000000233420110121313490200000000000000000000000510000000000000000003000101000000000000001000000000000000011200120004434343479600000000000210100111000000000201464583600160342000001402400000171665115343316200300000301012124055261021140510112223362442307241339122256022431635701102185219151522112291541142611264455242711194223848122528113691183160
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2211307.001307000000000000000000000300000010000002200115115031321117400003200000000000000000014281825000000000000001010001000001000000000050000000050130000001011002000016285233326000000000004735049001280428129027500000272128120050730000010800000000011946013726310930010000420102500404912022010050103232091032510543088374702514001012001172224131112121083211100000020100102210100
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2411028.0010280000000000000000000000100000000000039240047514785713320001221000000000000000000141551000001000001000001000000000000010000010000001010110000021050001002522111057100000000000320100550102000000006305600007060000006000000020043263156108139225772900150000410403611312302110020050101192160017254942041000631100313102071813212220126126041000100011301125016240
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................221998.009980000000000000000000001300000000000016341262110321461531000001000000000000000005420000000010000010130000000000011000000000001010001100003000000000010834464320601000000000100210010000000000000721000006022200000010000000008241412113158341504400000220004325210315614530800201301206260205144166124222333616151850142916571295301181315551730702101010539195223333030
...........................................................................................................CGGTT-TAA-GCCATTTGACGCAC-T...........................................................................................................231739.00739000000001100200000000008000000000000621002912113259120004200000000000000000074160701480000023013710000602200501023004010000000010020000000000000024520013115400000000000240600010001130000000132830100080000001200000000092611137171555241025200001000064020510031115301005001013031133311001020108002002010240021153361212010013341001020010002021002514400
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................231682.006820000000000000000000000000000000000001252025300510121007000000000000000000000007124000000000010000000000010000030000000000000000204100000000000000012313110011000000000009507001201010100000056151000106000000130000000001103111091105000040001002001001003000760600001024102010161512146883130352212260431043195451023002200100000000000101000133000
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................191674.00674000000000000000000003912000000000000000003700021224210000000000000000000000025241723000000000000000004300000001000000000000000000000000000000300010091618131244020000000000000530200160200000000001295630001302400000230000000002661000010000100000003000000000000000100100100037011300261011108435201240100131001013910182210568002100030000010001102000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................231662.00662000020010100000000000310000000000001002211030021125160000000000000000000000000404726220100000001000000000030000013051010180100001000402200000000000000023000800000000000000013150100111307230120000002203111000130800000023000000000683614131443481000810001000111040310101103004000621218310418045141411110115101110076011601003041001000000110110102024100
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................181657.00657000000000000000000006132000000000000272312310123461241620001000000000000000000010790000000000000000001000000000000000000001000000000000000000000000039645190010000000000000001001601010000000028626200006103000000060000000009331917112092017000000004400000002010000000200400038106000964567131120020100000000000601010000111001000000000000000007000
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................201637.006370000000000100000000000200000000000201110013101300321000010000000000000000000160500000000000000003000000000102000000000000000000000000000000000001311520001000000000002801100120012000000001151200107000000000000001005100431210230000000001100015001220331400400401017211001121493115170021265032178412331022328241313364318735432113171119655692106020
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------TC...................................................................................................................................251586.005860000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409177000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------ATC..................................................................................................................................251479.00479000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038297000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................221442.004420000000000000000000000000010000000001100001000001141000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031101030000000000010000000000001010000006111000301200000110000001022014000100000200000011010100010112001101103100051000008337243151131185000031900101391735682594018660116610224104234012702000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................221438.00438000000000000000000000000000000000000000010200010444110000000000000000000000032100000001120010000200000900010100000103200000002125600100000200000002101700000000000000010701200320012012000002614000011020000000200000010000000122100191001100000010541071223202007004020014116200311024827015213117002091113003104000025101300000001078103012320010
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211419.004190000000000000000001010010000100000000000002000100030000011000000000000000000189913000000010000000000000000000000000000300003010000000000002000000000201200100000000000013210800617192130272000001600000002000000000000000000002201163838112629200100000000011003004020000000000004002100241114130010000010010103600000000020001000000000100100103000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................231400.00400000000000000000000000110000000000001000001300120224000000000000000000000000011000000000000000000000000000000000000001000000000000000000000000000533561411100000030000023000000000000000000116011000010070000001000000010024310020200200030000300000200200020000020121111521100014351817001201110042061421766946025683535722301112121120012815020
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................231390.003900000000000000000000000000000000000031312200120226030412000000000000000000000007135300020000000000002000000000002000000000000000000000000000000000002204181102000000000000101000100010000000002322010008015100000700000000008241572687844300100000000000000010010100000802013102000120054200151102001310300732021300083112351031021021110412000
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................191386.00386000000000000000000000401000113301240000000110000000110000000000000000000000001512600000000100000010000000000000100000000000000000800666298000041200000001000000000000000000130052014013100700000442100002000000000300000000012301012220106000102000000000001000000000000100002001000030013010000000000000000000000000000000000000000000000003000
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................221354.00354000000000000000000001100000000000000111000700311203000000000000000000000000032110000000000000000100020000000000000000000000001000000000000000000243438000000000000000000000300100000000003636200030830000001000000000012011007514810000000100000102200010071020020101410000207655613112500021203301132411281201286042150104100131104051004020
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................231337.003370000000000000000000000000000000000000000001000000011000000000000000000000000753700000000000000000001100000000000000001000100000000000000000000000010000000000000000001100000401010200000000010000000000000000000000000000201141872991754000200000001000001000010000000000012012000120002000011000010000330100200000000000000000000000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AT...................................................................................................................................251270.00270000010000000000000000000000000000000000000100000000000000000000000000000000010520000000000000000000000000000200000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000020130001000016581000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................241244.002440000000000000000000000100000000000002100018000110251100000000000000000000000533300000002000000001000100000100000000000000000000100000000000000001303070070000000000000101000202000100000033010000202000000100000000002300101125210200000000010000000200000001000000001800120081808319350000100021100000801001000071102000010000000201102000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................221239.0023900000000000000000000200000000000000020011351001211305000000000000000000000001000000010000000000000000000000000000000000000000000000000000002000332131301000000000000000000000000000000000013000000010000000000000000001150010100220000200010003202001002090000130001010000106394604115100101100020121683070000603132720222030021200516020
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................211233.0023300000000000000000000000000000000000000010020100021121000000000000000000000008103600010001101000003010000001101100010200000000000000000000010001000000114000000000000000510200050100000000000102000000040000001000000000101100120003000000005000000000000000000000000010001000105619123150010000100200000801110000010000000000000110000001000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................221197.0019700000000000000000000000000000000000002000650101043601000000000000000000000000000000000000000000010000000000000000000130100103010332110000000020000000200000001000000000005605001100000000000010000000000000000000000000000000212100118000000000000031000013110000000000001001000150102010010000010100123000200101000000000000000000000018000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................241192.001920000000000000000000000000000000000001001000000001001000000000000000000000000000100070000000000000000001000200000000000000000000000000000000000000001010000000000000000000000000000000000010130000002000000100000000000300177310101066500100001000001020000000020000210103018000010101000051000001102000001011100134070922061100000100009310
.....................................................................CTCAATTTGTAAATGTGAG-------------------ATC..................................................................................................................................221173.00173000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012746000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTA....................................................................................231171.0017100000000000000000000001000000000000000000010010003000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001010000110107000000000000000000000000000000010010100000010000000000000000010100000000100000000000000100000000000000020000112000052241742501100010000001100031005121100243010610000002010100003000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................221170.0017000000000000000000000101000000000000010001112000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021513121000000000000000000000000000000000019020000012000000000000000008348000000000000000010000000000000001000001100410000000150712050001003000110212312222301362023110010001212210100000
...............................................................AATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................241169.0016900000000000000000000000000000000000000000001000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000000000000000000000000001585332541252000500000000000000000010000000000000001000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................201167.001670000000000000000000000100000000000010020103000111112000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001210070200000000000000000000000000000000005242000101100000020000000003337101100001000000003100000001000020010100010001001000151007010040000003100500320361400384011200001001111001700000
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................181162.00162000000000000000000000002000000000000100000000000000100000000000000000000000022241013000000010000000000000000000010000000000000000000000000000000000003011110000000000000001200000300010000000001011000202000000000000000000010002000000000000000000000010000101001000010011010000143218110120000120100001102010000002000100010000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCG.....................................................................................221137.00137000000000000000000000000000000000000100000200040401010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003020100000000000000010000000000000030001102000010100000000000000000000400000000000000001000000002001111100000100001000000604371210074122100000065142965600000001020000001001000400000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTG.......................................................................................221123.00123000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000090200000000000000000000000000000000000000022000000000000000000010000000000000000201000000500000000000000000330031111011000000000000002020000110100200110002100011030102010030001110100702000100010131061400011011030111616110
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................231116.00116000000000000000000000000003000000000100000100002012010000000000000000000000059470000000100000010000000000030200000000000000000000000000000000000001000000000000000000000000000000000000000200000000000000000000000000200000111230200200000000000000000000000000210010002000062137131021000000000202102000001013003200011100010000101000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................241111.001110000000000000000000000000000000000000100023001301131000000000000000000000000343500000000000001000000000001000000000000000000000000000000030000000010021000000000000000000000000000000000013020000000000000100000000001411001311030001000000000000100000000001000000100010000141106030120000000110000010000000043002100000000000010000010
.................................................................TAATCTCAATTTGTAAATGTGCT-------------------.....................................................................................................................................231110.00110000000000000000000000000000000000000212007100130166210000000000000000000000000000000000000000000000000000000000000000000000004063000000000000000003020010100000000000430200000000000000000100000000000000000000000000000000000000000000000000122101110000200100000046113100010208040000000000010010101000000000000000000000000000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGA......................................................................................221105.00105000000000000000000000000000000000000100000000000100100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000120100010000000000000000000010000000000000305000000100000010000000000100002102002000000000000000000000200300200200001001000111422000120010000021102502140000124002400014103211011201110
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................241104.00104000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000002000000100000000000000000000000110000000000000000001000000000010100100010001000110417220011000000110102662031100574131420060001122200202000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................23196.00960000000000000000000000000000000000010000001000100100000000000000000000000000464300000000000000000000100000000000000000000000000000000000000000000000000100000000000000100000000010000000000010000000000000000000000000000317137127200000000000111000100010000000000001010000020301030020000000010000100100000000000000000000002000201001
...................................................................ATCTCAATTTGTAAATGTGAG-------------------ATC..................................................................................................................................24192.009200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAGATT........................................................................................23187.00870000000000000000000000000000000000000000013000000010000000000000000000000000010100000000000000000000000000600000000000000000000000000000000000000300110000000000000000000000000000000000002010000001000000000000000000020722107355000000000000000000000000010000100001100000111200000001000000300100011001000021000000000000000000101000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGC......................................................................................23181.0081000000000000000000000000000000000001000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000001000010200000000000000000021020001001101000000000012000000110400000401000210000000218110030000000000100002030000022121201042010000000311000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25179.0079000000000000000000000000000000000000000000001000000000000000000000000000000013120000000100000000000000000030000000500000000001011000000000000000000000010000000000000000000300000020000000401000000100000000000000000140000350004200100000000001001000000000000100012000100020000060000010110000000110002000000000000000001100000102000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................22179.0079000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031101020100000000000010000000000000000000003000000100000000000000000020022042524000000000000000000000000000000100000100000050003020010001000000000311000000121030200010002011000004030
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................22179.00790000010000000000000000000000000000000000000000000000100000000000000000000000111100000001000000000000001000020000000010000000000100010001000000000000010000000000000001301001003050300000033000000100000000000000000000100002103010100200000001000002010000000000000011002100100101110020000000000100000110001000000000000000000000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................22174.0074000000000000000000000000000000000000000010000000121310000000000000000000000013120000000100000000000000000110300000000000000000000000000000000000001104000000000004000010000000000000000000311100000000000000000000000050001242003000000002000000000000010000000100004001000000012000000000000000000000010000000001300000000000000001000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................24171.0071000000000000000000000000000000000000000000000100100000000000000000000000000031310000000000000000000000000000000000001000000000000000000000000000000000000000000000000110100010100010000000000000000000000001000000000010000891012100001000000000000000000000000000012000000020303110036001100000001100001000000000000000000000000002000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................23169.0069000000000000000000000000000000000000000000100000020010000000000000000000000051640000000000000000000000000030000000000000000000000000000000000000003100000000000000100000000010000000000002100000011000000020000000000120000320001000000000000000001000000000100000000100000041011070000100000000001100000000001000000000000000000012000
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................20168.0068000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000020000000001000000000000000000000000000010109000000000000000000000000000000000000332000050400000000000000000010011020101100100000000000000000000000000100002000000000202000000000000010000000101000101000200000001030100304000
......................................................................TCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................21165.0065000000000000000000000000000000000000100010000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000010000000000000100000000100000000000000000010133044232000000000000000000000000000000000000000000240102100000000000000000301000000020120100020001010003013010
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................22165.0065000000000000000000000010000000000001000000000010000000000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000212113004000000000000000000000000000000000310000010100000000000000000001100000000000000000001001000000000000000001000000000001204100020000000100600201110000110001200000001020100001000
......................................................................TCAATTTGTAAATGTGAG-------------------A....................................................................................................................................19164.00640000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001201002400000000500000000000000000000000000000000000002390103000000000000000000000000000100000000000000000000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................24164.0064000000000000000000000000000000000000000000100000001000000000000000000000000010000001000000000000000000000050000000000000000000000000000000000000040002000000000000000000000000000000000000103000010300000001000000000340120132111000000000000000000000000000100000000000000020111020000000000000200100010000021012100000010100000000000
.......................................................................CAATTTGTAAATGTGAG-------------------.....................................................................................................................................17163.0063000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712182400000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGT......................................................................................21161.0061000000000000000000000000000000000000000000000010200000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000100000000100000000000000000020000011001000000001000001000000000000000010000000000031510100122001000100100301050000101021110003010030000201000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................20159.0059000000000000000000000100000000000000000000000000110000000000000000000000000024240000000000000000010000000000000000000000000000000000000000000000002004000000000000000100000010100000000000111000000000000001000000000121000000001000000000000000000000000000000000001000000391214000000000010000001100000100000000000000000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................19159.0059000000000000000000000011000000000000000000000000001000000000000000000000000001000000000000000000000200000003000000000000000000000000100000000000011001000000000000000010000000001000000000211000030000100000000000000231000000001000000000000000000000000000000101000001000000000010001000000000020200212000000001000201004010110400000
droSim2
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................22169427.006942718528821174333632352935030371203614161073820253001
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23119115.00191151192486348825423311551161255307872664458922000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2516387.0063870000603635000001000000
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................1812039.00203910011900121010013002000
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................2111638.0016382618219512007150484160017000
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................1911590.001590242633145865010010000000
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................2011585.0015851150181407792101051010000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2211305.00130568587121109313800521313021000
........................................................................AATTTGTAAATGTGAG-------------------.....................................................................................................................................161859.008590000000000859000000
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................181622.006220000200100617200000
.......................................................................CAATTTGTAAATGTGAG-------------------.....................................................................................................................................171582.005820000000100581000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241553.00553911246001251377254294460000
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................191535.005350104100000529000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................221395.00395210335132101038110000
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................211329.0032914513815412245002101000
.........................................................................ATTTGTAAATGTGAG-------------------.....................................................................................................................................153283.678510000000010850000000
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211278.002780001305185230412000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241171.001718605500230090106000
...........................................................................................................................................GCAATTGGAGATTGCT.....................................................................................161146.001460000000000146000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................241138.0013811041067310212100000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................241135.001350000126900000000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................231135.00135201014000161710352002000
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211132.001322061958010160036903000
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................221102.001022759600030231001000
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................23192.00920104103639170003000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................23181.0081891560014110000117000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23172.0072000140097121017012000
...............................................................AATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................24142.00420000201520410000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................22141.0041572000612214002000
....................................................................................................................................TCACTTTGCAATTGGAGATTGA......................................................................................22135.0035240000715005002000
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................22135.0035117304015101101000
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20133.00330001617000000000000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................24133.0033002000043100023000
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20130.00300101020215000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20130.0030450210032003100000
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................18130.0030000127000002000000
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23129.0029110400120082010000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTCG...................................................................................24129.0029000027200000000000
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................19128.0028000027100000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................23128.002800053026301008000
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23127.002748200045003100000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21124.0024000181000005000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AA...................................................................................................................................25123.0023000000000020021000
..................................................................AATCTCAATTTGTAAATG............................................................................................................................................................18120.0020000020000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................22120.0020102700000000100000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................19119.0019100150111000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21119.0019100300000013200000
.........................................................................................................................................TTGCAATTGGAGATTGCT.....................................................................................18119.0019000000000018100000
..........................................................................................................................................TGCAATTGGAGATTGCT.....................................................................................17117.0017000000000017000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................20117.001700215000009000000
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................19115.0015000011100003000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................22114.001400015000002024000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................23114.0014000000030000011000
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................18113.001322001010004300000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24112.001200050001002004000
.....................................................................CTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................20112.0012000000000012000000
......................................................................TCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................20111.0011000011000000000000
......................................................................TCAATTTGTAAATGTGA.........................................................................................................................................................17110.001000000043102000000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22110.001000020005002001000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................24110.001000000034001002000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................2619.00900007100001000000
.......................................................................CAATTTGTAAATGTGA.........................................................................................................................................................1619.00900000042003000000
.....................................................................CTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2018.00800000000008000000
..............................................................................................................................CGCAC-TCACTTTGCAATTGGAGA..........................................................................................2318.00800100011014000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------GT...................................................................................................................................2518.00800000000008000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2117.00730004000000000000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2317.00700002000002003000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------A....................................................................................................................................2417.00700010000420000000
.......................................................................CAATTTGTAAATGTGAG-------------------CG...................................................................................................................................1917.00700007000000000000
........................................................................AATTTGTAAATGTGAG-------------------CG...................................................................................................................................1816.00600005000001000000
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................1916.00624000000000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCG.....................................................................................2216.00621200000000100000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2316.00600020000002002000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCC.....................................................................................2316.00622100000001000000
................................................................ATAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2415.00500000000000005000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................2315.00512000010000001000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2315.00500004000001000000
................................................................ATAATCTCAATTTGTAAATGTG..........................................................................................................................................................2215.00500021010000001000
.................................................................................................................................AC-TCACTTTGCAATTGGAGA..........................................................................................2015.00500005000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2415.00512000000002000000
........................................................................AATTTGTAAATGTGA.........................................................................................................................................................1525.001000000054001000000
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................2015.00500000000005000000
....................................................................................................................................TCACTTTGCAATTGGAGA..........................................................................................1815.00500005000000000000
.................................................................................................................................AC-TCACTTTGCAATTGGAGATT........................................................................................2215.00500005000000000000
....................................................................TCTCAATTTGTAAATGTG..........................................................................................................................................................1815.00500005000000000000
......................................................................TCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................2115.00500000010001003000
...........................................................................................................CGGTT-TGA-GCCATTTGAC.................................................................................................................1815.00500005000000000000
......................................................................TCAATTTGTAAATGTGAG-------------------A....................................................................................................................................1934.6714000000000014000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGTA.....................................................................................2214.00422000000000000000
............................................................................................................................................CAATTGGAGATTGCT.....................................................................................1514.00400000000004000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2214.00411200000000000000
......................................................................TCAATTTGTAAATGTGAG-------------------C....................................................................................................................................1914.00400000000004000000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-C...........................................................................................................2314.00403100000000000000
.................................................................................................................................AC-TCACTTTGCAATTGGAGAT.........................................................................................2113.00300003000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................2513.00300000000000003000
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................2013.00300001100001000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2213.00300000000002001000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-............................................................................................................2213.00300002010000000000
.................................................................TAATCTCAATTTGTAAATGTA..........................................................................................................................................................2113.00300000003000000000
.................................................................TAATCTCAATTTGTAAA..............................................................................................................................................................1713.00300000002010000000
......................................................................TCAATTTGTAAATGTGAG-------------------T....................................................................................................................................1913.00300000000003000000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2213.00300000001000002000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2613.00300003000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TA...................................................................................................................................2513.00300010000000002000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2213.00300000000002001000
.................................................................TAATCTCAATTTGTAAATGTAG.........................................................................................................................................................2213.00300030000000000000
....................................................................................................................................TCACTTTGCAATTGGAGAT.........................................................................................1913.00300003000000000000
.................................................................TAATCTCAATTTGTAAATGTT..........................................................................................................................................................2113.00300030000000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2313.00300020001000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAG...........................................................................................2013.00321000000000000000
........................................................................................................................................TTTGCAATTGGAGATTGCT.....................................................................................1913.00300000000003000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AT...................................................................................................................................2513.00300010000001001000
........................................................................AATTTGTAAATGTGAG-------------------A....................................................................................................................................1772.5718000000000018000000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2512.00200000000000002000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2212.00200000002000000000
..................................................................................................................................C-TCACTTTGCAATTGGAGATT........................................................................................2112.00200002000000000000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1912.00200002000000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------GA...................................................................................................................................2512.00200000000002000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGG......................................................................................2112.00201010000000000000
...............................................................AATAATCTCAATTTGTAAATGT...........................................................................................................................................................2212.00200002000000000000
..................................................................................................................................C-TCACTTTGCAATTGGAGAT.........................................................................................2012.00200002000000000000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCA..............................................................................................................2112.00200002000000000000
..............................................................................................................................CGCAC-TCACTTTGCAATTGGAG...........................................................................................2212.00200001000000100000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-G...........................................................................................................2312.00210100000000000000
.............................................................................................................GTT-TGA-GCCATTTGACGCAC-T...........................................................................................................2112.00220000000000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGC......................................................................................2012.00201000000001000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGTA.....................................................................................2312.00201000010000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------AAA..................................................................................................................................2612.00200000000000002000
.....................................................................................................................................CACTTTGCAATTGGA............................................................................................1512.00200000002000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTCG...................................................................................2312.00200001000001000000
...........................................................................................................CGGTT-TGA-GCCATTTGACG................................................................................................................1912.00200002000000000000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-TC..........................................................................................................2412.00200002000000000000
...........................................................................................................CGGTT-TGA-GCCATTTGACGC...............................................................................................................2012.00200001001000000000
................................................................................................................................CAC-TCACTTTGCAATTGGAGATT........................................................................................2312.00200002000000000000
.................................................................TAATCTCAATTTGTAAATGA...........................................................................................................................................................2022.00400000001001002000
droSec2
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACAC----------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23117440.001744010960205030901340
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2215609.00560911026162518365
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2215549.005549519016170128
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................221775.00775764641
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211575.00575562706
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211385.00385384001
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241379.003791002032155
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................231265.0026561527136
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211180.001809609714
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................211145.001459822628
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................201131.001311022243
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241105.0010583796
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................22179.0079733309
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21152.0052113542
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................24147.004727884
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20145.004572945
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23139.003923547
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21139.003933051
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20136.003636000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22129.0029111602
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20129.002927020
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................23125.002541902
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................23119.001911242
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................22118.001831221
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19112.001212000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24111.001111000
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................18111.00117031
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23110.00109001
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1919.0099000
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................2019.0092322
....................................................................................................................................TCACTTTGCAATTGGAGATTGA......................................................................................2219.0090603
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1918.0085210
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................2218.0081142
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................2018.0084301
..................................................................................................................................C-TCACTTTGCAATTGGAGATTG.......................................................................................2218.0080611
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2318.0086101
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................1818.0088000
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2318.0088000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................2318.0085120
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................2417.0070061
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................2317.0073130
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................2516.0062301
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2316.0066000
.................................................................TAATCTCAATTTGTAAATGTT..........................................................................................................................................................2116.0066000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2215.0050410
.................................................................TAATCTCAATTTGTAAATGTAG.........................................................................................................................................................2215.0055000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2015.0055000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................2314.0041111
....................................................................TCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2214.0042110
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................2414.0040121
..................................................................AATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2214.0044000
.....................................................................................................................................CACTTTGCAATTGGAGATTGT......................................................................................2114.0041111
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................2213.0033000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGC......................................................................................2313.0030120
..............................................................................................................................CGCAC-TCACTTTGCAATTGGAG...........................................................................................2213.0030030
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................1913.0030300
.................................................................TAATCTCAATTTGTAAATGTA..........................................................................................................................................................2113.0033000
.....................................................................................................................................CACTTTGCAATTGGAGATTGA......................................................................................2113.0031200
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1913.0032100
.....................................................................CTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................2213.0033000
..................................................................AATCTCAATTTGTAAATGTGG.........................................................................................................................................................2113.0033000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................2313.0030120
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2413.0031011
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGA......................................................................................2312.0020101
.......................................................................CAATTTGTAAATGTGAG-------------------A....................................................................................................................................1812.0020020
..........................................................................TTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................1912.0020110
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2212.0020200
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2212.0022000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1912.0022000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................1912.0022000
.........................................................................................................................................TTGCAATTGGAGATTGCT.....................................................................................1812.0021100
........................................................................................................................................TTTGCAATTGGAGATTGCT.....................................................................................1912.0021010
.................................................................TAATCTCAATTTGTAAAT.............................................................................................................................................................1812.0022000
......................................................................................................................................ACTTTGCAATTGGAGATTGC......................................................................................2012.0022000
................................................................................................................................CAC-TCACTTTGCAATTGGAGATT........................................................................................2312.0021010
................................................................................................................................CAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2612.0020020
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2512.0022000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2212.0020110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2412.0022000
.................................................................TAATCTCAATTTGTAAATGG...........................................................................................................................................................2012.0022000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2212.0021100
...................................................................ATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2212.0022000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2412.0021010
................................................................................................................................CAC-TCACTTTGCAATTGGAG...........................................................................................2011.0011000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................2611.0010100
.................................................................TAATCTCAATTTGTAAATGTTGA-------------------.....................................................................................................................................2311.0011000
....................................................................................................................................TCACTTTGCAATTGGAGATTTT......................................................................................2211.0011000
droYak3
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23112198.00121981211053192239351635031000
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................2213643.0036431832603131548210004
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2211388.001388211548624020344910000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................221914.009140911300000000
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211285.002850283200000000
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211260.002600250800110000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241186.001860138101110260000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................221183.001830018300000000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................231122.0012201710400000010
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211112.0011221274702150000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241106.001061832000020000
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................23175.00752613222480000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21143.0043042000010000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................24138.00380142300010000
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................20136.0036027100170000
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20131.0031031000000000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24130.0030029000010000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-C...........................................................................................................23128.0028002800000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21127.0027012820140000
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20123.0023190000130000
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23123.0023012200000000
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19122.0022031900000000
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20121.0021021000000000
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................19121.0021018110010000
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................21119.001982101160000
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................23113.0013011200000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................22111.001102400140000
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-............................................................................................................22110.001001900000000
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................23110.001003002410000
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................22110.001037000000000
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................20110.001001800010000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2019.00909000000000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2319.00908000010000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................2519.00909000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2318.00808000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2318.00808000000000
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................2218.00807000100000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------GT...................................................................................................................................2518.00800000000008
....................................................................................................................................TCACTTTGCAATTGGAGATTGCC.....................................................................................2317.00700500020000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................2317.00702410000000
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1916.00606000000000
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................1815.00504100000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2215.00500500000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2414.00404000000000
...............................................................AATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2513.00303000000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................2313.00302100000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2213.00300300000000
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................1813.00303000000000
.......................................................................................................................................CTTTGCAATTGGAGATTGCC.....................................................................................2013.00300300000000
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGCT.....................................................................................2413.00300000030000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2313.00303000000000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................1913.00303000000000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................2412.00201100000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCC.....................................................................................2112.00200200000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCG.....................................................................................2212.00201100000000
........................................................................AATTTGTAAATGTGA.........................................................................................................................................................1542.00800000000008
..................................................................AATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2212.00202000000000
............................................................................................................GGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................2212.00202000000000
................................................................ATAATCTCAATTTGTAAATGTG..........................................................................................................................................................2212.00201000010000
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1912.00201100000000
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................1912.00201000010000
.............................................................................................................GTT-TGA-GCCATTTGACGCAC-T...........................................................................................................2111.00110000000000
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................2311.00100100000000
.......................................................................................................................................CTTTGCAATTGGAGATTGC......................................................................................1911.00100100000000
...............................................................................................................................GCAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2711.00100000010000
...................................................................ATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2211.00101000000000
.......................................................................CAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCC........................................................................................................................2811.00101000000000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................2911.00100000010000
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------A....................................................................................................................................2411.00100010000000
..................................................................AATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................2211.00101000000000
.................................................................................................................................AC-TCACTTTGCAATTGGAGATTGC......................................................................................2411.00100000010000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2411.00100100000000
......................................................................TCAATTTGTAAATGTGAC-------------------.....................................................................................................................................1811.00100010000000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1911.00101000000000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TTT..................................................................................................................................2611.00100000010000
.....................................................................................................................................CACTTTGCAATTGGAGATTCT......................................................................................2111.00100000010000
....................................................................................................................................................GATTGCTCGAGACTGCGGCAT.......................................................................2111.00100000010000
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2211.00101000000000
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2411.00101000000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTTT...................................................................................2411.00100100000000
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................2511.00101000000000
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2211.00101000000000
droEre2
-------------------------------------------------TATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAG-------------------CGGTT-TGA-GCCATTTGACGCAC-TCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TTATTATGTACACA-----------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................23132497.0032497228358560033535934667382
.................................................................TAATCTCAATTTGTAAATGTGA.........................................................................................................................................................22110394.00103949499164402322840931
.....................................................................................................................................CACTTTGCAATTGGAGATTGCT.....................................................................................2213785.00378519946120145223510400
..................................................................AATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2211509.0015091495011570
.................................................................TAATCTCAATTTGTAAATGTG..........................................................................................................................................................211929.0092989132017124
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................241726.00726282317027512722
..................................................................AATCTCAATTTGTAAATGTGA.........................................................................................................................................................211717.00717715200000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................241269.00269169101191069
.....................................................................................................................................CACTTTGCAATTGGAGATTGC......................................................................................211133.001331785464350
.................................................................TAATCTCAATTTGTAAATGT...........................................................................................................................................................201127.001279603113140
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................231103.0010320115112531
....................................................................................................................................TCACTTTGCAATTGGAGATTGCT.....................................................................................231101.001014227491918
.................................................................TAATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................23191.0091500102380
....................................................................................................................................TCACTTTGCAATTGGAGATTG.......................................................................................21186.00861120140320
......................................................................................................................................ACTTTGCAATTGGAGATTGCT.....................................................................................21184.0084171305760
...................................................................ATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................21174.007467000160
................................................................ATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................24173.0073480201391
..................................................................AATCTCAATTTGTAAATGTG..........................................................................................................................................................20166.006666000000
.................................................................TAATCTCAATTTGTAAATGTGAC-------------------.....................................................................................................................................23159.005978110420
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------C....................................................................................................................................24158.005835510791
.................................................................TAATCTCAATTTGTAAATGTGT.........................................................................................................................................................22149.0049210102250
.....................................................................................................................................CACTTTGCAATTGGAGATTG.......................................................................................20137.003780021890
...........................................................................................................CGGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................23134.003431200100
...................................................................ATCTCAATTTGTAAATGTGA.........................................................................................................................................................20133.003327110220
................................................................ATAATCTCAATTTGTAAATGTGA.........................................................................................................................................................23133.003328100220
.....................................................................................................................................CACTTTGCAATTGGAGATTGCC.....................................................................................22127.002712400110
.....................................................................CTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................19124.002412002424
..................................................................AATCTCAATTTGTAAATGTGAG-------------------T....................................................................................................................................23123.002323000000
....................................................................................................................................TCACTTTGCAATTGGAGATTGC......................................................................................22120.00208120720
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------TT...................................................................................................................................25115.001510000230
.................................................................TAATCTCAATTTGTAAATG............................................................................................................................................................19115.001512100020
......................................................................TCAATTTGTAAATGTGAG-------------------.....................................................................................................................................18113.00132000290
.................................................................TAATCTCAATTTGTAAATGTT..........................................................................................................................................................21113.001313000000
....................................................................................................................................TCACTTTGCAATTGGAGATT........................................................................................20112.00124000107
.................................................................TAATCTCAATTTGTAAATGTAG.........................................................................................................................................................22112.001212000000
.....................................................................................................................................CACTTTGCAATTGGAGATT........................................................................................1919.0096000210
.....................................................................................................................................CACTTTGCAATTGGAGATTGCTT....................................................................................2318.0082010320
......................................................................................................................................ACTTTGCAATTGGAGATTGCTC....................................................................................2217.0071100410
.....................................................................CTCAATTTGTAAATGTGA.........................................................................................................................................................1817.0075001100
...........................................................................................................CGGTT-TGA-GCCATTTGACG................................................................................................................1917.0070000007
..................................................................AATCTCAATTTGTAAATGTGAG-------------------A....................................................................................................................................2317.0077000000
....................................................................TCTCAATTTGTAAATGTGA.........................................................................................................................................................1916.0066000000
..................................................................AATCTCAATTTGTAAATGT...........................................................................................................................................................1916.0066000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2016.0066000000
.................................................................................................................................AC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2515.0050000410
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-T..............................................................................................................................2415.0052200100
....................................................................................................................................TCACTTTGCAATTGGAGATTGT......................................................................................2215.0053100100
......................................................................TCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................2315.0051100030
.......................................................................................................................................CTTTGCAATTGGAGATTGCT.....................................................................................2015.0052000120
...............................................................AATAATCTCAATTTGTAAATGTGAG-------------------.....................................................................................................................................2515.0055000000
.................................................................TAATCTCAATTTGTAAATGA...........................................................................................................................................................2015.0054000010
.................................................................TAATCTCAATTTGTAAATGTGG.........................................................................................................................................................2214.0044000000
...................................................................ATCTCAATTTGTAAATGTG..........................................................................................................................................................1914.0044000000
.....................................................................................................................................CACTTTGCAATTGGAGATTGCA.....................................................................................2214.0042000110
.....................................................................................................................................CACTTTGCAATTGGAGAT.........................................................................................1814.0042001010
................................................................ATAATCTCAATTTGTAAATGTG..........................................................................................................................................................2214.0044000000
......................................................................................................................................ACTTTGCAATTGGAGATTG.......................................................................................1914.0041000300
.................................................................TAATCTCAATTTGTAAATGTA..........................................................................................................................................................2114.0043000010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------G....................................................................................................................................2413.0033000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGG..................................................................................................................................2313.0031200000
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2713.0031000101
........................................................................................................................................TTTGCAATTGGAGATTGCT.....................................................................................1913.0031000200
......................................................................................................................................ACTTTGCAATTGGAGATTGCTT....................................................................................2213.0031000110
............................................................................................................GGTT-TGA-GCCATTTGACGCAC-T...........................................................................................................2213.0033000000
...................................................................ATCTCAATTTGTAAATGTGAT-------------------.....................................................................................................................................2113.0032001000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGT.................................................................................................................................2413.0032000100
..............................................................................................................................CGCAC-TCACTTTGCAATTGGAG...........................................................................................2213.0031000110
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CT...................................................................................................................................2512.0021000100
...................................................................ATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2312.0021000100
..................................................................................................................................C-TCACTTTGCAATTGGAGATTGC......................................................................................2312.0021100000
.................................................................TAATCTCAATTTGTAAATGTGAT-------------------T....................................................................................................................................2412.0021000010
.................................................................TAATCTCAATTTGTAAATGTGAG-------------------CGT..................................................................................................................................2612.0020000002
..................................................................AATCTCAATTTGTAAATGTGAA-------------------.....................................................................................................................................2212.0022000000
....................................................................TCTCAATTTGTAAATGTGAG-------------------CGGTT-...............................................................................................................................2512.0020000002
................................................................ATAATCTCAATTTGTAAATGTGT.........................................................................................................................................................2312.0020000200
...............................................................................................................................GCAC-TCACTTTGCAATTGGAGATTGCT.....................................................................................2712.0020000110
..................................................................AATCTCAATTTGTAAATGTGAG-------------------CG...................................................................................................................................2412.0021000100
.................................................................TAATCTCAATTTGTAAATGTGC.........................................................................................................................................................2212.0021100000

Generated: 10/20/2015 at 07:30 PM