ID:

dmo-mir-283

 Coordinate:

scaffold_6359:3257715-3257808 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -32.2 -32.0

Flybase annnotation

intron [Dmoj\GI21762-in]; utr5 [utr5_plus_15220]; pre_miRNA [Dmoj\mir-283-RM]; miRNA [Dmoj\miR-283-RA]

No Repeatable elements found

Sense Strand Reads

CATGGCTGTTAGTGTGTGAGCAAGAGCGAGTGAACCAGCTGTCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCCAATATGAAACACTCGGAATTTCAGTTGGTATATACTTTTTTGAATTGCATTTTATCACCAAAGCGCAAACCAAAAAAGAACAAGAAAAGCAAAGAG

**************************************************.((((((..(((((((.(((((((((((.(((((((((.....................)))))))))))))))))))).)))))))..))))))...********************************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 M046

female body

 V041

embryo

 V110

male body		 V056

head

 V049

head
.................................................................AAATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 0 1 144761.00 144761 112058 24321 7753 457 117 55
.................................................................AAATATCAGCTGGTAATTCTGG........................................................................................................... 22 0 1 52781.00 52781 31151 21446 146 23 9 6
.................................................................AGATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 8834.00 8834 8762 57 12 1 1 1
.................................................................AAATATCAGCTGGTAATTCTG............................................................................................................ 21 0 1 8316.00 8316 1100 7016 129 57 11 3
.................................................................AAATATCAGCTGGTAATTCTGGGA......................................................................................................... 24 0 1 3411.00 3411 2179 614 198 357 38 25
.................................................................AAATATCAGCTGGTAATTCTGGGT......................................................................................................... 24 1 1 2773.00 2773 1861 475 216 168 33 20
.................................................................AGATATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 2446.00 2446 2375 69 0 1 1 0
..................................................................AATATCAGCTGGTAATTCTGGG.......................................................................................................... 22 0 1 2058.00 2058 220 1831 7 0 0 0
.................................................................AAATATCAGCTGGTAATTCT............................................................................................................. 20 0 1 1871.00 1871 166 1376 18 201 71 39
..................................................................AATATCAGCTGGTAATTCTGG........................................................................................................... 21 0 1 1541.00 1541 61 1480 0 0 0 0
.................................................................AAATATCAGCTGGTAATTC.............................................................................................................. 19 0 1 1523.00 1523 1459 60 0 3 1 0
.................................................................AAAGATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 1382.00 1382 1380 1 1 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 1324.00 1324 1306 3 14 0 1 0
.................................................................ATATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 1081.00 1081 1076 2 3 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 1044.00 1044 1043 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGC.......................................................................................................... 23 1 1 811.00 811 748 59 3 1 0 0
.................................................................TAATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 750.00 750 747 1 2 0 0 0
...............................................................................................................CGGAATTTCAGTTGGTATATAC............................................................. 22 0 1 649.00 649 616 22 0 8 2 1
.................................................................AAATATCAGCTGGTAATTCTGGGC......................................................................................................... 24 1 1 612.00 612 560 43 7 0 1 1
.................................................................AACTATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 548.00 548 543 2 1 0 0 2
.................................................................AAATATCAGCTGGTAATTCTGGT.......................................................................................................... 23 1 1 495.00 495 334 123 16 13 4 5
.................................................................AAATATCCGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 494.00 494 486 0 6 1 1 0
..................................................................AATATCAGCTGGTAATTCTG............................................................................................................ 20 0 1 451.00 451 0 451 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 390.00 390 386 4 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 368.00 368 367 1 0 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 332.00 332 331 1 0 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGGG.......................................................................................................... 23 1 1 319.00 319 276 10 33 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGA.......................................................................................................... 23 1 1 300.00 300 156 135 6 1 2 0
.................................................................ATATATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 299.00 299 297 2 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTGG.......................................................................................................... 23 1 1 298.00 298 181 3 106 1 2 5
.................................................................AAATAGCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 288.00 288 277 1 10 0 0 0
.................................................................AAATATCACCTGGTAATTCTGGG.......................................................................................................... 23 1 1 275.00 275 268 4 2 0 0 1
...................................................................ATATCAGCTGGTAATTCTGGG.......................................................................................................... 21 0 1 253.00 253 103 140 5 4 1 0
.................................................................AAATTTCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 243.00 243 241 0 2 0 0 0
.................................................................TAATATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 236.00 236 235 1 0 0 0 0
.................................................................AAATATCAGCTGGTATTTCTGGG.......................................................................................................... 23 1 1 235.00 235 233 0 2 0 0 0
.....................................................................ATCAGCTGGTAATTCTGGG.......................................................................................................... 19 0 1 232.00 232 110 64 56 2 0 0
.................................................................AAATATCAGCTGGTAATTCTGAC.......................................................................................................... 23 2 1 224.00 224 224 0 0 0 0 0
.................................................................AAATATCAGCTGGTCATTCTGGG.......................................................................................................... 23 1 1 223.00 223 164 1 55 0 0 3
.................................................................AAATATCAGCTGGTAATTCTGT........................................................................................................... 22 1 1 221.00 221 38 166 1 10 2 4
.................................................................AAATATCAGCTGGTAATTCTGC........................................................................................................... 22 1 1 220.00 220 205 15 0 0 0 0
...................................................................ATATCAGCTGGTAATTCTGG........................................................................................................... 20 0 1 213.00 213 27 186 0 0 0 0
................................................................CAAATATCAGCTGGTAATTCTGGG.......................................................................................................... 24 1 1 210.00 210 178 19 11 2 0 0
.................................................................AGATATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 201.00 201 196 1 0 2 2 0
.................................................................AAATATCAGCTGGAAATTCTGGG.......................................................................................................... 23 1 1 195.00 195 177 9 8 0 1 0
...............................................................................................................CTGAATTTCAGTTGGTATATAC............................................................. 22 1 1 185.00 185 185 0 0 0 0 0
.................................................................AAATATCATCTGGTAATTCTGGG.......................................................................................................... 23 1 1 180.00 180 158 16 5 1 0 0
.................................................................AAATATCCGCTGGTAATTCTGG........................................................................................................... 22 1 1 173.00 173 173 0 0 0 0 0
.................................................................AAATATCAGCTGGCAATTCTGGG.......................................................................................................... 23 1 1 163.00 163 118 6 35 1 2 1
.................................................................AGATATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 146.00 146 139 4 0 1 1 1
.................................................................AACTATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 144.00 144 144 0 0 0 0 0
.................................................................AAATATCAGCTAGTAATTCTGGG.......................................................................................................... 23 1 1 132.00 132 67 54 11 0 0 0
.................................................................AAATATCAGCTGGTAATTTTGGG.......................................................................................................... 23 1 1 129.00 129 124 1 4 0 0 0
....................................................................TATCAGCTGGTAATTCTGGG.......................................................................................................... 20 0 1 120.00 120 75 38 6 0 0 1
..............................................TCACCCGATTCTCAAAGGT................................................................................................................................. 19 0 1 119.00 119 72 13 26 6 1 1
.................................................................AAATATCAGCTGGTAATTCTGGGAA........................................................................................................ 25 1 1 118.00 118 67 33 2 15 0 1
.................................................................AGATATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 111.00 111 91 19 0 1 0 0
.................................................................AAATATCAGCTCGTAATTCTGGG.......................................................................................................... 23 1 1 108.00 108 74 29 5 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTG.......................................................................................................... 23 1 1 102.00 102 12 4 79 1 3 3
..................................................................AATATCAGCTGGTAATTCTGGGA......................................................................................................... 23 0 1 100.00 100 23 52 1 24 0 0
.................................................................GAATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 100.00 100 66 20 10 0 4 0
.................................................................AAATATCAGCTGGTAATTCCGGG.......................................................................................................... 23 1 1 93.00 93 71 5 15 1 1 0
...............................................................................................................CGGAATTTCAGTTGGTATATA.............................................................. 21 0 1 93.00 93 79 9 0 5 0 0
.................................................................AAATATTAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 92.00 92 87 1 4 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGAG.......................................................................................................... 23 1 1 91.00 91 80 2 9 0 0 0
..................................................................AATATCAGCTGGTAATTCT............................................................................................................. 19 0 1 87.00 87 0 86 1 0 0 0
.................................................................AAATATCGGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 85.00 85 66 11 8 0 0 0
.....................................................................ATCAGCTGGTAATTCTGG........................................................................................................... 18 0 1 85.00 85 30 52 3 0 0 0
.................................................................AAATAGCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 78.00 78 76 1 0 0 1 0
................................................................CAAATATCAGCTGGTAATTCTGG........................................................................................................... 23 1 1 78.00 78 56 22 0 0 0 0
.................................................................AAATATCACCTGGTAATTCTGG........................................................................................................... 22 1 1 78.00 78 75 3 0 0 0 0
.................................................................AAATTTCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 77.00 77 77 0 0 0 0 0
.................................................................AAATATCAGCCGGTAATTCTGGG.......................................................................................................... 23 1 1 74.00 74 62 6 5 0 1 0
.................................................................AAATATCAGCTGGTAATT............................................................................................................... 18 0 1 70.00 70 8 22 17 21 2 0
.................................................................AAATATCAGCTGGTAATTCTAGG.......................................................................................................... 23 1 1 70.00 70 46 5 19 0 0 0
.................................................................AAATATCAGCTAGTAATTCTGG........................................................................................................... 22 1 1 69.00 69 18 50 1 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGG........................................................................................................... 22 1 1 69.00 69 58 11 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTT........................................................................................................ 25 2 1 67.00 67 36 21 2 7 0 1
.................................................................AAATATCAGCTGGTAATTCTTG........................................................................................................... 22 1 1 65.00 65 55 4 4 0 0 2
...................................................................ATATCAGCTGGTAATTCTG............................................................................................................ 19 0 1 65.00 65 1 63 0 1 0 0
.................................................................AAGTATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 64.00 64 47 8 9 0 0 0
.................................................................AAATATCATCTGGTAATTCTGG........................................................................................................... 22 1 1 63.00 63 51 12 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGA........................................................................................................... 22 1 1 63.00 63 43 19 0 0 0 1
.................................................................AAATATGAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 60.00 60 56 0 4 0 0 0
.................................................................AAATATCAGTTGGTAATTCTGGG.......................................................................................................... 23 1 1 58.00 58 54 1 3 0 0 0
....................................................................TATCAGCTGGTAATTCTGG........................................................................................................... 19 0 1 58.00 58 19 39 0 0 0 0
.................................................................AAATACCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 57.00 57 47 2 7 0 1 0
.................................................................AAATATCAACTGGTAATTCTGGG.......................................................................................................... 23 1 1 56.00 56 49 4 3 0 0 0
.................................................................AAATATCAGCTGGTGATTCTGGG.......................................................................................................... 23 1 1 55.00 55 25 5 24 1 0 0
.................................................................AAATATCAGCTGGTATTTCTGG........................................................................................................... 22 1 1 54.00 54 54 0 0 0 0 0
.................................................................AAATATCAGCTGGTCATTCTGG........................................................................................................... 22 1 1 53.00 53 52 0 1 0 0 0
.................................................................AGATATCAGCTGGTAATTCTGGC.......................................................................................................... 23 2 1 52.00 52 52 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATCCTGGG.......................................................................................................... 23 1 1 50.00 50 44 1 5 0 0 0
.................................................................AGATATCCGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 47.00 47 47 0 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGG........................................................................................................... 22 1 1 47.00 47 41 6 0 0 0 0
.................................................................AAATATCAGCTCGTAATTCTGG........................................................................................................... 22 1 1 46.00 46 29 17 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGG......................................................................................................... 24 1 1 45.00 45 26 14 2 3 0 0
.................................................................AAATGTCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 45.00 45 31 3 11 0 0 0
.................................................................AAATATCAGCTGGTAATTCGGGG.......................................................................................................... 23 1 1 45.00 45 42 2 1 0 0 0
.................................................................AAATATCAGCTGATAATTCTGGG.......................................................................................................... 23 1 1 44.00 44 39 2 3 0 0 0
..............................................................................................................TCGGAATTTCAGTTGGTATAT............................................................... 21 0 1 43.00 43 31 12 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGCG.......................................................................................................... 23 1 1 43.00 43 29 1 11 0 1 1
.................................................................AGATATCAGCTGGTAATTC.............................................................................................................. 19 1 1 43.00 43 43 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGAT........................................................................................................ 25 1 1 43.00 43 17 16 0 8 2 0
.................................................................AAATATCAGCTGGTAATGCTGGG.......................................................................................................... 23 1 1 42.00 42 40 0 2 0 0 0
...............................................................................................................CGGTATTTCAGTTGGTATATAC............................................................. 22 1 1 42.00 42 42 0 0 0 0 0
.................................................................AGATATCAGCTGGTAATTCTGGGC......................................................................................................... 24 2 1 41.00 41 41 0 0 0 0 0
.................................................................AAATATCAGCTGGTAACTCTGGG.......................................................................................................... 23 1 1 41.00 41 31 1 9 0 0 0
.................................................................AAATATCAGCTGGTAGTTCTGGG.......................................................................................................... 23 1 1 39.00 39 25 5 8 1 0 0
.................................................................AAATATCAGCTTGTAATTCTGGG.......................................................................................................... 23 1 1 39.00 39 14 19 4 2 0 0
.................................................................AAATATCAGCTGGTAAGTCTGGG.......................................................................................................... 23 1 1 38.00 38 27 0 11 0 0 0
.................................................................GAATATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 38.00 38 20 18 0 0 0 0
.................................................................AAATATCGGCTGGTAATTCTGG........................................................................................................... 22 1 1 36.00 36 24 11 0 0 1 0
.................................................................AGATATCAGCTGGTAATTCTGGT.......................................................................................................... 23 2 1 36.00 36 32 3 0 0 1 0
.................................................................AAATATCAGCTGGTAATTCTC............................................................................................................ 21 1 1 35.00 35 21 11 0 2 1 0
.................................................................AGCTATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 35.00 35 35 0 0 0 0 0
.................................................................AAATATAAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 35.00 35 18 4 13 0 0 0
.................................................................AAATATCCGCTGGTAAGTCTGGG.......................................................................................................... 23 2 1 35.00 35 35 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTCGG.......................................................................................................... 23 1 1 35.00 35 21 1 10 2 1 0
...................................................................................................................ATTTCAGTTGGTATATACTTTT......................................................... 22 0 1 34.00 34 16 15 3 0 0 0
.................................................................AAATATCAGATGGTAATTCTGGG.......................................................................................................... 23 1 1 33.00 33 9 0 24 0 0 0
..............................................................................................................TCGGAATTTCAGTTGGTATATA.............................................................. 22 0 1 32.00 32 28 3 0 1 0 0
...............................................................................................................CGGAATTTCAGTTGGTATATACA............................................................ 23 1 1 31.00 31 31 0 0 0 0 0
...................................................................AGATCAGCTGGTAATTCTGGG.......................................................................................................... 21 1 1 30.00 30 30 0 0 0 0 0
.................................................................AAATATCAGCAGGTAATTCTGGG.......................................................................................................... 23 1 1 30.00 30 26 3 1 0 0 0
..................................................................AATATCAGCTGGTAATTCTGGGT......................................................................................................... 23 1 1 29.00 29 5 22 1 0 1 0
.................................................................AAATATTAGCTGGTAATTCTGG........................................................................................................... 22 1 1 29.00 29 27 2 0 0 0 0
...............................................................................................................CGGAATTTCAGTTGGTATAT............................................................... 20 0 1 29.00 29 24 4 0 1 0 0
..............................................TCACCCGATTCTCAAAGGC................................................................................................................................. 19 1 1 29.00 29 29 0 0 0 0 0
......................................................................TCAGCTGGTAATTCTGGG.......................................................................................................... 18 0 1 29.00 29 14 12 3 0 0 0
.................................................................AAATATCAGCTGGTAATTCC............................................................................................................. 20 1 1 28.00 28 27 0 0 0 1 0
.................................................................AAATATCAGCTGGCAATTCTGG........................................................................................................... 22 1 1 28.00 28 20 8 0 0 0 0
.................................................................AAGTATCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 28.00 28 15 12 1 0 0 0
.................................................................AAATATCAGCTGGTAATTCTT............................................................................................................ 21 1 1 28.00 28 2 23 0 2 1 0
.................................................................AAATATCCGCTGGTAATTCTGGT.......................................................................................................... 23 2 1 28.00 28 27 0 1 0 0 0
.................................................................AAATATCAGCTGGTAATTATGGG.......................................................................................................... 23 1 1 27.00 27 11 2 13 0 1 0
.................................................................AAATATCAGCTGGTAATTTTGG........................................................................................................... 22 1 1 27.00 27 25 2 0 0 0 0
................................................................TAAATATCAGCTGGTAATTCTGGG.......................................................................................................... 24 0 1 26.00 26 1 25 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 26.00 26 26 0 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 24.00 24 24 0 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 24.00 24 23 0 1 0 0 0
.................................................................AAATATCAGCTGTTAATTCTGGG.......................................................................................................... 23 1 1 24.00 24 14 8 2 0 0 0
.................................................................AAATATGAGCTGGTAATTCTGG........................................................................................................... 22 1 1 24.00 24 24 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCCGG........................................................................................................... 22 1 1 24.00 24 19 5 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCAGGG.......................................................................................................... 23 1 1 24.00 24 21 0 3 0 0 0
...............................................................................................................CTGAATTTCAGTTGGTATATA.............................................................. 21 1 1 23.00 23 23 0 0 0 0 0
.................................................................TGATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 22.00 22 22 0 0 0 0 0
.................................................................AAATATCAGCTGGTTATTCTGGG.......................................................................................................... 23 1 1 22.00 22 4 2 14 0 0 2
.................................................................AAAGATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 22.00 22 22 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATACTGGG.......................................................................................................... 23 1 1 22.00 22 21 0 1 0 0 0
.................................................................AAATAACAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 22.00 22 17 3 2 0 0 0
........................................................................................AGCAATGCCCAATATGAAACACT................................................................................... 23 0 1 21.00 21 15 4 2 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAA......................................................................................................... 24 1 1 21.00 21 4 16 0 1 0 0
.................................................................AAATATCAGCTTGTAATTCTGG........................................................................................................... 22 1 1 21.00 21 1 20 0 0 0 0
.................................................................AAATATCAGCTGGTACTTCTGGG.......................................................................................................... 23 1 1 20.00 20 5 2 11 0 0 2
.................................................................ATATATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 20.00 20 20 0 0 0 0 0
.................................................................AAATATCAGCCGGTAATTCTGG........................................................................................................... 22 1 1 20.00 20 13 6 1 0 0 0
.................................................................GGATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 20.00 20 7 9 0 4 0 0
.................................................................AGATATCAGCTGGTAATTCT............................................................................................................. 20 1 1 19.00 19 9 5 0 3 1 1
.................................................................TAATATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 19.00 19 19 0 0 0 0 0
................................................................TAAATATCAGCTGGTAATTCTGG........................................................................................................... 23 0 1 19.00 19 1 18 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTGT.......................................................................................................... 23 2 1 19.00 19 13 0 6 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGAAA....................................................................................................... 26 2 1 19.00 19 1 11 1 6 0 0
.................................................................AAATATCAGCTGGTAATTCTGGTT......................................................................................................... 24 2 1 19.00 19 8 10 1 0 0 0
.................................................................AAATATCCGCTGGTCATTCTGGG.......................................................................................................... 23 2 1 18.00 18 17 0 1 0 0 0
.............................................CTCACCCGATTCTCAAAGGT................................................................................................................................. 20 0 1 18.00 18 13 1 3 1 0 0
.................................................................ACATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 18.00 18 7 2 8 0 1 0
.................................................................AAATACCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 18.00 18 16 2 0 0 0 0
.................................................................AAATATCAGCTGCTAATTCTGGG.......................................................................................................... 23 1 1 18.00 18 13 1 3 0 1 0
.................................................................AAATATCCGCTGGTAATTCTTGG.......................................................................................................... 23 2 1 18.00 18 17 0 1 0 0 0
.................................................................AAATATCAGCTGGTAATCCTGG........................................................................................................... 22 1 1 17.00 17 12 5 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTAG........................................................................................................... 22 1 1 17.00 17 15 2 0 0 0 0
.................................................................AGATATCCGCTGGTAATTCTGG........................................................................................................... 22 2 1 17.00 17 17 0 0 0 0 0
.................................................................ATATATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 16.00 16 16 0 0 0 0 0
.................................................................AGATATCAGCTGGTATTTCTGGG.......................................................................................................... 23 2 1 16.00 16 16 0 0 0 0 0
................................................................AAAATATCAGCTGGTAATTCTGGG.......................................................................................................... 24 1 1 16.00 16 4 12 0 0 0 0
.....................................................................AGCAGCTGGTAATTCTGGG.......................................................................................................... 19 1 1 16.00 16 16 0 0 0 0 0
.................................................................AGATATCAGCTGGTAATTTTGGG.......................................................................................................... 23 2 1 16.00 16 16 0 0 0 0 0
.................................................................AAATATCAGCTGATAATTCTGG........................................................................................................... 22 1 1 16.00 16 15 0 1 0 0 0
.................................................................AAAAATCCGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 15.00 15 15 0 0 0 0 0
.................................................................AAATATCAGCTGGTAAATCTGGG.......................................................................................................... 23 1 1 15.00 15 9 0 6 0 0 0
.................................................................CAATATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 15.00 15 10 0 5 0 0 0
.................................................................AAATATCCGCTGGTAATTCTTGT.......................................................................................................... 23 3 1 14.00 14 14 0 0 0 0 0
.................................................................AGATATCAGCTGGTAATTCTGC........................................................................................................... 22 2 1 14.00 14 14 0 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 14.00 14 14 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAC......................................................................................................... 24 2 1 14.00 14 14 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCGGG........................................................................................................... 22 1 1 14.00 14 11 3 0 0 0 0
.................................................................AGATATCAGCTGGTAATTCTGAC.......................................................................................................... 23 3 1 14.00 14 14 0 0 0 0 0
.................................................................AAATATCAGCTGGTAGTTCTGG........................................................................................................... 22 1 1 14.00 14 6 8 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTA........................................................................................................ 25 2 1 14.00 14 11 3 0 0 0 0
.................................................................AGATATCAGCTGGCAATTCTGGG.......................................................................................................... 23 2 1 14.00 14 12 0 2 0 0 0
...............................................................TCAAATATCAGCTGGTAATTCTGGG.......................................................................................................... 25 2 1 14.00 14 14 0 0 0 0 0
.................................................................ATATATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 14.00 14 12 2 0 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 14.00 14 14 0 0 0 0 0
.................................................................AAATGTCAGCTGGTAATTCTGG........................................................................................................... 22 1 1 13.00 13 11 2 0 0 0 0
...............................................................................................................CGAAATTTCAGTTGGTATATAC............................................................. 22 1 1 13.00 13 13 0 0 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 13.00 13 13 0 0 0 0 0
.................................................................AAATATCCGCTGGTAAGTCTGG........................................................................................................... 22 2 1 13.00 13 13 0 0 0 0 0
................................................................GAAATATCAGCTGGTAATTCTGGG.......................................................................................................... 24 1 1 13.00 13 0 13 0 0 0 0
..................................................................AATATCAGCTGGTAATTCTGGA.......................................................................................................... 22 1 1 12.00 12 0 12 0 0 0 0
..................................................................AAAATCAGCTGGTAATTCTGGG.......................................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
................................................................AAAATATCAGCTGGTAATTCTGG........................................................................................................... 23 1 1 12.00 12 0 12 0 0 0 0
...............................................................................................................CGCAATTTCAGTTGGTATATAC............................................................. 22 1 1 12.00 12 12 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATGCTGG........................................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
.................................................................AAATATCAGCTGGTAAGTCTGG........................................................................................................... 22 1 1 12.00 12 10 1 1 0 0 0
.................................................................AAATATCAGCAGGTAATTCTGG........................................................................................................... 22 1 1 12.00 12 7 5 0 0 0 0
.................................................................AAACATCCGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 12.00 12 12 0 0 0 0 0
..................................................................AGTATCAGCTGGTAATTCTGGG.......................................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0
.................................................................AGAGATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 12.00 12 12 0 0 0 0 0
................................................................GAAATATCAGCTGGTAATTCTGG........................................................................................................... 23 1 1 12.00 12 0 12 0 0 0 0
................................................................CAAATATCAGCTGGTAATTCTG............................................................................................................ 22 1 1 12.00 12 2 10 0 0 0 0
.................................................................AAATATCAGCTGGTAATTGTGGG.......................................................................................................... 23 1 1 12.00 12 8 1 3 0 0 0
.................................................................AAATATCTGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 11.00 11 7 0 3 1 0 0
.................................................................AAATATCAGCTGGTAATTCTGGTA......................................................................................................... 24 1 1 11.00 11 6 3 1 0 1 0
.................................................................AGATATCAGCTGGTAATTCTGGA.......................................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0
.................................................................AACTATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 11.00 11 11 0 0 0 0 0
.................................................................AAATATCAGCTGCTAATTCTGG........................................................................................................... 22 1 1 11.00 11 9 2 0 0 0 0
.................................................................AAATATCCGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 11.00 11 10 0 1 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 11.00 11 11 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTC........................................................................................................ 25 2 1 11.00 11 11 0 0 0 0 0
...................................................................AAATCAGCTGGTAATTCTGGG.......................................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0
................................................................CGAATATCAGCTGGTAATTCTGGG.......................................................................................................... 24 2 1 11.00 11 11 0 0 0 0 0
...............................................................................................................CTGAATTTCAGTTGGTATATACA............................................................ 23 2 1 11.00 11 11 0 0 0 0 0
.................................................................AAATATCAGTTGGTAATTCTGG........................................................................................................... 22 1 1 11.00 11 10 1 0 0 0 0
.................................................................AGAAATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTGGA......................................................................................................... 24 1 1 10.00 10 6 0 2 0 1 1
....................................................................TATCAGCTGGTAATTCTG............................................................................................................ 18 0 1 10.00 10 0 10 0 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGGGA......................................................................................................... 24 1 1 10.00 10 7 0 3 0 0 0
.................................................................AAATCTCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 10.00 10 3 0 7 0 0 0
.................................................................AAACATCAGCTGGGAATTCTGGG.......................................................................................................... 23 2 1 10.00 10 9 0 1 0 0 0
.................................................................AAATATCAGCTGGTATTTTTGGG.......................................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0
.................................................................AACTATCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 10.00 10 10 0 0 0 0 0
.................................................................AAATATCCGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 10.00 10 10 0 0 0 0 0
.................................................................AAATATCAGCGGGTAATTCTGGG.......................................................................................................... 23 1 1 10.00 10 6 3 1 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGGGA......................................................................................................... 24 1 1 10.00 10 9 0 0 1 0 0
.....................................................................AGCAGCTGGTAATTCTGG........................................................................................................... 18 1 1 10.00 10 10 0 0 0 0 0
.................................................................AAAGATCAGCTGGGAATTCTGGG.......................................................................................................... 23 2 1 10.00 10 8 0 2 0 0 0
.................................................................AAACATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 10.00 10 9 1 0 0 0 0
.................................................................GGATATCAGCTGGTAATTCTGG........................................................................................................... 22 2 1 10.00 10 5 5 0 0 0 0
.................................................................AAATATCACCTGGTAATTCTG............................................................................................................ 21 1 1 10.00 10 8 2 0 0 0 0
.................................................................TAATATCAGCTGGTAATTCTGGGT......................................................................................................... 24 2 1 10.00 10 10 0 0 0 0 0
.................................................................ATATATCAGCTGGTAATTCTGGC.......................................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGGC......................................................................................................... 24 2 1 10.00 10 10 0 0 0 0 0
..................................................................AATATCAGCTGGTAATTCTGT........................................................................................................... 21 1 1 10.00 10 0 10 0 0 0 0
.................................................................ATATATCAGCTGGTAATTC.............................................................................................................. 19 1 1 10.00 10 10 0 0 0 0 0
.................................................................AAATAGCAGCTGGTAATTCTGGGA......................................................................................................... 24 1 1 9.00 9 9 0 0 0 0 0
.................................................................AAATAACAGCTGGTAATTCTGG........................................................................................................... 22 1 1 9.00 9 8 1 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTGGC.......................................................................................................... 23 2 1 9.00 9 9 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTTT....................................................................................................... 26 3 1 9.00 9 2 5 0 2 0 0
.................................................................AGATATCAGCTGGTAATTCTGGGAA........................................................................................................ 25 2 1 9.00 9 9 0 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGGC.......................................................................................................... 23 2 1 9.00 9 9 0 0 0 0 0
.................................................................AGATATCAGCTGGTAATTCTTGG.......................................................................................................... 23 2 1 9.00 9 8 0 1 0 0 0
.................................................................AAATATCCCCTGGTAATTCTGGG.......................................................................................................... 23 2 1 9.00 9 9 0 0 0 0 0
.................................................................AAATATCAGCTGGTCATTCTTGG.......................................................................................................... 23 2 1 9.00 9 1 0 7 0 0 1
.................................................................AGCTATCAGCTGGTAATTCTGG........................................................................................................... 22 2 1 9.00 9 9 0 0 0 0 0
.................................................................AAATATCCGCTGGTAATTCTTG........................................................................................................... 22 2 1 9.00 9 9 0 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTGGT.......................................................................................................... 23 2 1 9.00 9 8 0 0 0 1 0
.................................................................AAATATCATCTGGTAATTCTGGGA......................................................................................................... 24 1 1 8.00 8 8 0 0 0 0 0
.................................................................ATACATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AGATAGCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTCTGGGC......................................................................................................... 24 2 1 8.00 8 8 0 0 0 0 0
..................................................................GATATCAGCTGGTAATTCTGG........................................................................................................... 21 1 1 8.00 8 0 8 0 0 0 0
.................................................................AAATATCAGCTGGTAATCTGGG........................................................................................................... 22 3 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTA............................................................................................................ 21 1 1 8.00 8 2 5 1 0 0 0
.................................................................AATTATCAGCTGGTAATTCTGGG.......................................................................................................... 23 1 1 8.00 8 5 0 3 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGC.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGGGT......................................................................................................... 24 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGTGATTCTGG........................................................................................................... 22 1 1 8.00 8 5 3 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGGC.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AGATATCAGCTGGGAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGGAATTCTTGG.......................................................................................................... 23 2 1 8.00 8 1 0 7 0 0 0
........................................................................................ATCAATGCCCAATATGAAACACT................................................................................... 23 1 1 8.00 8 8 0 0 0 0 0
.................................................................AAACATCACCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTCGTAATTCTG............................................................................................................ 21 1 1 8.00 8 1 7 0 0 0 0
.................................................................AGATATCATCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGTCATTCCGGG.......................................................................................................... 23 2 1 8.00 8 6 0 2 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGGGT......................................................................................................... 24 2 1 8.00 8 7 0 1 0 0 0
.................................................................AAAGATCCGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTC.......................................................................................................... 23 2 1 8.00 8 1 4 0 3 0 0
.................................................................AGATATCAGCTGGTCATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AGACATCAGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGGTGGTAATTCTGGG.......................................................................................................... 23 1 1 8.00 8 7 0 1 0 0 0
...............................................................................................................CTGTATTTCAGTTGGTATATAC............................................................. 22 2 1 8.00 8 8 0 0 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGGC.......................................................................................................... 23 2 1 7.00 7 7 0 0 0 0 0
.................................................................ATATATCCGCTGGTAATTCTGGG.......................................................................................................... 23 2 1 7.00 7 7 0 0 0 0 0
.................................................................AAATATCAACTGGTAATTCTGG........................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.................................................................AAAGATCAGCTGGTAATTC.............................................................................................................. 19 1 1 7.00 7 7 0 0 0 0 0
..................................................................AACATCAGCTGGTAATTCTGGG.......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.................................................................AAATATCATCTGGTAATTCTG............................................................................................................ 21 1 1 7.00 7 2 5 0 0 0 0
.................................................................AAATATCAGCTGGCAATTCTGTG.......................................................................................................... 23 2 1 7.00 7 0 0 7 0 0 0
.................................................................TAATATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 7.00 7 6 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAAA........................................................................................................ 25 2 1 7.00 7 0 6 0 0 1 0
.................................................................GAATATCAGCTGGTAATTCTG............................................................................................................ 21 1 1 7.00 7 0 7 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGGGC......................................................................................................... 24 2 1 7.00 7 7 0 0 0 0 0
.................................................................AAATATCAGCTGGTCATTCTGGGT......................................................................................................... 24 2 1 7.00 7 2 0 5 0 0 0
.................................................................TAATATCAGCTGGTAATTCTGGGC......................................................................................................... 24 2 1 7.00 7 6 0 1 0 0 0
.................................................................AGATATCAGTTGGTAATTCTGGG.......................................................................................................... 23 2 1 7.00 7 7 0 0 0 0 0
.................................................................AAATATCTGCTGGTAATTCTGG........................................................................................................... 22 1 1 7.00 7 5 2 0 0 0 0
.................................................................AGATATCAGCTGGAAATTCTGGG.......................................................................................................... 23 2 1 7.00 7 7 0 0 0 0 0
.................................................................AAATATCAGCTGGTAACTCTGG........................................................................................................... 22 1 1 7.00 7 6 1 0 0 0 0
.....................................................................ATCTGCTGGTAATTCTGGG.......................................................................................................... 19 1 1 7.00 7 7 0 0 0 0 0

Anti-sense strand reads

GTACCGACAATCACACACTCGTTCTCGCTCACTTGGTCGACAGTGGAGTGGGCTAAGAGTTTCCATTTATAGTCGACCATTAAGACCCTCGTTACGGGTTATACTTTGTGAGCCTTAAAGTCAACCATATATGAAAAAACTTAACGTAAAATAGTGGTTTCGCGTTTGGTTTTTTCTTGTTCTTTTCGTTTCTC

**********************************************.((((((..(((((((.(((((((((((.(((((((((.....................)))))))))))))))))))).)))))))..))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V110

male body		 V056

head

 V049

head

 V041

embryo
..................................................................................AGACCATAGTTACGGGTTA............................................................................................. 19 2 1 164.00 164 124 28 8 4 0
..................................................................................AGACCATAGTTACGGGTTAG............................................................................................ 20 3 5 24.00 120 88 27 3 2 0
.................................................................................GAGACCATAGTTACGGGTTA............................................................................................. 20 3 4 7.50 30 27 3 0 0 0
..................................................................................AGACCATAGTTACGGGTTAGA........................................................................................... 21 3 3 7.33 22 14 5 1 2 0
...........................CTCTCTTGGTCGATAGAGG.................................................................................................................................................... 19 3 15 5.00 75 74 1 0 0 0
..................................................................................AGACCATAGTTACGGGTT.............................................................................................. 18 2 5 3.60 18 16 1 1 0 0
...............................................................................GTGAGACCCTAGTTACGGGTTA............................................................................................. 22 3 1 1.00 1 0 0 0 1 0
...................................................................................GACCATAGTTACGGGTTAGA........................................................................................... 20 3 6 0.67 4 2 1 0 1 0
................................TTGGTCGACAGTAGAGTGGAT............................................................................................................................................. 21 3 3 0.33 1 0 0 1 0 0
..................................................................................AGACCGTAGTTACGGGTTAGA........................................................................................... 21 3 4 0.25 1 1 0 0 0 0
...................................................................................GACCATAGTTACGGGTTA............................................................................................. 18 2 4 0.25 1 1 0 0 0 0
..................................................................................AGACCGTAGTTACGGGTTAG............................................................................................ 20 3 10 0.10 1 1 0 0 0 0
..................................................................................AGACCATAGTTACGGGGTA............................................................................................. 19 3 15 0.07 1 0 0 1 0 0
..................................................................................GGACCATAGTTACGGGTTA............................................................................................. 19 3 18 0.06 1 0 0 1 0 0
...........................................................................................................................................................................TTTTGTTGATCTTTTGGTTTCT. 22 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6359:3257665-3257858 + dmo-mir-283 Known_mirbase CATGGCTGTTA--GT------------------GTGTG----AG------C------AAGAGC--------GAGTGAA-CCAGCTG----------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCC-AATA--TGAAACACTCGGAATTTCAGTTGGTATATACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA--------------CCAAAA-------AAGAAC-AAG------AAAAG----CAA---AGAG
droVir3 scaffold_12970:2047613-2047806 + dvi-mir-283 Known_mirbase CATGAGTATGG--CTG------------------TGAGC----G------T------GA----GAGA----GAAAGTA-CAAGATG----------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA---AGCG--CAAA-AA---A----AAA-------------TA--AC-AGA------AGAAT----AATAC-AAAT
droGri2 scaffold_14853:6953473-6953643 - dgr-mir-283 Known_mirbase CA---------------------------------------------------------------GAGAAAGAAAGAA------TGACG-------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-ATCG--CAAA-AA---AAA-C---CCAAAA-------AAAAAC-A------------------AA---AGAA
droWil2 scf2_1100000004515:1594746-1594931 - dwi-mir-283 Known_mirbase TGTGGC-----------------GAATGTATGAGTGGG----AA------T------GAGTGCGAG--------TG-GG--AG-GG-----------AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATATTTGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAAA-A-------A-AA---A----AA------------------AC-AAA------AAAAT----CAA---TCAA
dp5 XL_group1a:976001-976163 + dps-mir-283 Known_mirbase AGAGAG----------------------------------------------------AGTGCCAGA--------G-AA--AG-CGACGTCACGATTCACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA-GA---A----AA------------------AC-----------------------------
droPer2 scaffold_26:1090694-1090849 + dpe-mir-283 Known_mirbase -----------------------------------------------------------GTGCCAGA--------G-AA--AG-CGACGTCACGATTCACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA-GA---A----AA------------------AC-----------------------------
droAna3 scaffold_12929:2900338-2900536 - dan-mir-283 Known_mirbase TGTGACTGT--GTGT------------------GTGTG----TG------T------GTGTGTGTG--------T-TAC--AG-TGT--TCAC----CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCACCAAA-AACTACCTAA-AA---A---------AAGCC----------GC-AAA------AAAAC----CACCC-AAAA
droBip1 scf7180000396740:82066-82249 - AATGACTGT--ATGT------------------GTGT--------------------------GTGT---------TAA--AG-TGT--TCAC----CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTCTGAATTGCATTTTATCACCAAAA-A-------A-AA-----------TTAAATAT-AA------AA-AAA------AAACG----CAA---ACAA
droKik1 scf7180000302696:759786-759973 + TGT--CTCTTAGAGTC-TCGGGCGAAAGTGAGAG----ATTAGC----------------------------AAAGAA-CCAG-TGT---CAC----CTCCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCGTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAGA-A-------A-AA---A----AA------------------AC--------------------AA---ACTA
droFic1 scf7180000454038:645736-645946 + TGC--------------TAGAGGGAAAGCAAGA-----A----G------TAAGAAAGA------------GAGAGAAA--AG-TG----------TCACCTCACAGGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAA-AAACCGAAAAC---CCAAACAC-AAAA-----TA--AAACCCC-AACG----CAA---AATA
droEle1 scf7180000491023:1180251-1180470 - AATGAGTGC--------TGGAGGGAAAGTAAT---AGGATTAAGA------------GA------------GGGAGAAA--AG-TG----------TCACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAA-AGCG--CAA-AAACTGAAA-----CCAAACAC-CAAC-----CA--AAACTTC-AGAACAATTCA---ACAA
droRho1 scf7180000777097:75103-75287 - CTAGAG----------------GGAAAGTAAGAGT----TTAAA----------------------------GGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAA-AAACCGAAA-----CCAAACAC-CA-----------------------------A---AAAA
droBia1 scf7180000302041:36399-36541 + AA-----------------------------------------GA------------GA------------GAGAGAAA--AG-TG----------CCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CA----------------------------------------------------------------
droTak1 scf7180000414432:172257-172449 + TAAGAGATT--AAGA------------------GT----TTAAG------G------AA------------GAGAGAAA--AG-TGT-----C----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAAAAGCG--CAA-AAACCGAAA-----CCAAACACGCA--------------------AAA----CT----AAAA
droEug1 scf7180000409533:551286-551450 + AGT------------------------------------TTGAGA------------GA------------GAGAGAAA--AG-TGT-----C----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAAAAGCG--CAA-AAACCGAAA-----CCAA--------------------------------------------
dm3 chrX:15401983-15402118 + dme-mir-283 Known_mirbase T------------------------------------------------------------------------------------G----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAAACG--------------------------------------------------------
droSim2 x:14567230-14567433 + dsi-mir-283 Known_mirbase AATAGTACTTA--ATGT-----------------TGGGATTGAAAAAAAAAAAAAAAAA------------CAGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCGAAA-----CCAAACAC-CA-----------------------------C---AAAA
droSec2 scaffold_73:136409-136549 + dse-mir-283 Known_mirbase T------------------------------------------------------------------------------------G----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCGAAA-----CC----------------------------------------------
droYak3 X:9587599-9587764 + dya-mir-283 Known_mirbase T------------------------------------------------------------------------------------G----------TCACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACCAACCGAAA-----CCAAACAC-CA----------CA------AAAAA----CAATCAACAT
droEre2 scaffold_4690:11632460-11632631 - der-mir-283 Known_mirbase ATAG-TAATTA--ATGT-----------------TAAGATTGGAA------------GA-------------AGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCG--------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CATGGCTGTTA--GT------------------GTGTG----AG------C------AAGAGC--------GAGTGAA-CCAGCTG----------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCC-AATA--TGAAACACTCGGAATTTCAGTTGGTATATACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA--------------CCAAAA-------AAGAAC-AAG------AAAAG----CAA---AGAGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................231144761.0014476124321775355117112058457
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22152781.005278121446146693115123
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2118316.0083167016129311110057
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2413411.00341161419825382179357
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2412773.00277347521620331861168
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2212058.00205818317002200
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2011871.0018711376183971166201
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2111541.0015411480000610
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................1911523.0015236000114593
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................231811.00811593007481
.........................................................................................................................................................................CGGAATTTCAGTTGGTATATAC....................................................................................................221649.00649220126168
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................241612.00612437115600
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231495.00495123165433413
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201451.0045145100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231300.003001356021561
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211253.002531405011034
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................191232.002326456001102
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................231224.0022400002240
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221221.002211661423810
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................221220.00220150002050
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................201213.00213186000270
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................201120.0012038610750
.....................................................................................................TCACCCGATTCTCAAAGGT...........................................................................................................................................................................191119.00119132611726
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................251118.00118332106715
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................231100.00100521002324
.........................................................................................................................................................................CGGAATTTCAGTTGGTATATA.....................................................................................................21193.00939000795
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19187.00878610000
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18185.008552300300
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................18170.0070221702821
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25167.006721210367
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19165.00656300011
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22163.006319010430
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19158.005839000190
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24145.004514200263
........................................................................................................................................................................TCGGAATTTCAGTTGGTATAT......................................................................................................21143.004312000310
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25143.004316002178
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................21135.003511001212
.............................................................................................................................................................................ATTTCAGTTGGTATATACTTTT................................................................................................22134.003415300160
........................................................................................................................................................................TCGGAATTTCAGTTGGTATATA.....................................................................................................22132.00323000281
.........................................................................................................................................................................CGGAATTTCAGTTGGTATATACA...................................................................................................23131.00310000310
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23129.00292210150
.........................................................................................................................................................................CGGAATTTCAGTTGGTATAT......................................................................................................20129.00294000241
.....................................................................................................TCACCCGATTCTCAAAGGC...........................................................................................................................................................................19129.00290000290
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18129.002912300140
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................20128.00280001270
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21128.00282300122
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24126.00262500010
...............................................................................................................................................AGCAATGCCC-AATA--TGAAACACT..........................................................................................................................23121.00214200150
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23119.00191800010
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................26119.00191110016
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24119.00191010080
....................................................................................................CTCACCCGATTCTCAAAGGT...........................................................................................................................................................................20118.00181300131
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................24114.00140000140
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................25114.00143000110
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................22112.00121200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTC..................................................................................................................................................25111.00110000110
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18110.00101000000
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................21110.00101000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................2619.009500022
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................2118.008510020
........................................................................................................................AAATATCAGCTGGTAATTCTGTC....................................................................................................................................................2318.008400013
droVir3
CATGAGTATGG--CTG------------------TGAGC----G------T------GA----GAGA----GAAAGTA-CAAGATG----------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA---AGCG--CAAA-AA---A----AAA-------------TA--AC-AGA------AGAAT----AATAC-AAATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................231136788.00136788894200145577582583153138921138845037204137471647095149924835993469365363293914445324181656325363182667048454842753552334283465101180167113174125293329772952892435892716410959156611101257911297855665891326111292764447530810923
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22130695.0030695124311322027141316727631983224151971658713511718519433522132420513825371315751224150100000014332344482172523691085102698589685249159548039660856462939854211061379
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................21117347.001734737016930901421412115547285405143331833191715285329182177370240535348221432142516612111236000001121223111543192532901003001951779916401635138410651765156682364499134
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................24112704.00127041594037333020464854926081139534252412260526947231146194367280241108831459756619192741748137653127142012193124212326121521051623536781421428545832805511553862883382113163387433
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2016967.00696716491436577237461840036343326650388283891231601432952155014743095541810316182211862770010100100110001473145714903921921551459410098631111121055441147173
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2415251.005251989280245118354527133522726820018159238934125915513915223520125415110117636122151191100001120037108312931353108911118528721132711811563451221042414333133
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................2514646.0046462130352171301126829710100120535335511795281097129274124119785053943420122112210023708026134934684281982201101271471922718292258312
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................1914024.004024109474412762001200003210210159103981625173436222241600100210341162844385421206119282665466943743165940616541214
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................2612251.0022511048809011038401110000001013245287761122850738576403210000001000000000000304017829727418831176101491335663157208
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................2311731.00173155236937821200001082231000136161740294716142374067231110000011030101303694612317465029168158143132189182196112428
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................2311513.0015139013351117861354529000191831244141130172929863180754470211132111190000000010010031115353116352142058505553697441031
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211501.0015011011466510100000000010010141522232935891902010041000000000000000000020357372022168496500013
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................2211355.00135500422217413317000000100150211101133178020367304011181000213912201110271425212313712010821722131846458421261581696669
.....................................................................................................TCACCCGATTCTCAAAGGT...........................................................................................................................................................................1911120.001120002226038729411200010220028111324252515169616212816002406758000000000000000000151200800003004100000
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2111045.00104500100650000001000000000000013210212000010010000000000000000000100010120200000010011
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................241804.0080416031872311311000000000000074464267600000030011114417132122142121331613330200003233351612405040005
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................221798.00798731260000001000000000000210321221000020000101000000000001202000042322126135838417112920111
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................211441.004410012128222210821001100001108751114391521310100011270000020130330000003506011685121916717933681011
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221435.004354346003010160000141322235131961528122903101017000000001000000200151302344228403621302421138
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................201294.002940032510100000000000003002836332580000002100000000000000010000001920200014023310000
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................211283.002832631030200010000000000101221111821111910000002000000000010020005100000100016172419323900000
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201246.00246002240000301000001000000000020031200000000000000000000000000000001010221001100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................251205.0020526228151416710000110301114355568106803000023000000020120010132630300800110100200100
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................181194.0019410100634432300001021010095585231313600223025000000000000000000040130211310000000000000
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................191191.00191006553200000000100000000025628151010000210000000000000000000600671300022000000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211161.0016101671510000000000000000000710671032300101001000000000000000010080080001100200210200
....................................................................................................CTCACCCGATTCTCAAAGGT...........................................................................................................................................................................201159.00159003151013202000000000030110851122376130300001011000000000000000000010300400010001000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTC...................................................................................................................................................241154.001541010304100100000000001022114123201022020000020000000000000000011001110400013439500000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................251150.001506187201022010111010001131710210125120103510000100000000000001118000152310237532032
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................211142.00142002011000000100000000004812101053108243511100000000000000000000000081273100300241711
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................201142.001421201114013001000001030001212295404000013000110001100110000000200400016224179900000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT.................................................................................................................................................261123.00123000100001000400000000000111200003020231000000000100000000001000001922142030206421015
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................241118.001182983510101010000000000001011400010000001100000000000001000011000011211163221211139
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................231117.0011750292111232100000000100032020412212000051000000000000000000000115301192345421011
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................231105.00105011264201000000000110010000020201000000000000000000000000000120101000700101110010
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20187.0087007113000000000000000000000000100000000000000000000000000000020000000000000000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................23186.00860024100010000000000000000100311100000011000000222122010000000001025400000027101313
........................................................................................................................AAATATCAGCTGGTAATTCTCC.....................................................................................................................................................22183.00831010000000000000000000001001099710010000010000000000000000000000010000310843400000
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19177.007700550110000000010000000011203112302000011000000000000000000000000000000000000001
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................25176.00762011000001000000000020131352336302111110000100000021111000301000012230218010001
........................................................................................................................AAATATCAGCTGGTAATTCTAA.....................................................................................................................................................22173.007300010000000001000000000121311002401352200000000000000000000100000157300000012347
......................................................................................................CACCCGATTCTCAAAGGT...........................................................................................................................................................................18173.007300103021041000000000101423666104408000023000000000000000000000000000001000000000
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18167.0067001903000000000000000000040020012021000000000000000000000000000271300000020000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTC..................................................................................................................................................25162.006212340100000000000000010011120551601000002000000000011000000010130000021002300100
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA.................................................................................................................................................26160.00600000000000000300000010001214400150545301000000000000000000010100134400000120021
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24158.0058001020000000000000010000002214404000000000000000000010000000200000000513111200020
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAG..................................................................................................................................................25155.00550001000100000000000000002003020020220100000000000000000000000000194410100042247
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18148.004800441000000100000000000000000000000000000000000000000000000000010000100000000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23148.004810211100141300000000000010113100200000011000000000000000000010100100100000000000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21144.004400910000000000110201012110011102200100002000000000000000000010100010000101000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................26143.00433142000000000010110201211132124000000001000000000000000000000100800000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24142.004220102000110100011000010120100201100000002000000000000000101020010000022002100000
........................................................................................................................AAATATCAGCTGGTAATTCTAAA....................................................................................................................................................23337.671130000000000001000000000000020000020121120000000000000000000000000401811130000006451318
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................23135.00350013200000000000000010211030300000000020000001000000011000210000000002100003301
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22134.00340137000000000000000000001100023300000000000000000000000000010000033030010000002
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................22134.00340061012100000000000010001010302300000010000000000000000000000000610100100000200
........................................................................................................................AAATATCAGCTGGTAATTCTGGTCT..................................................................................................................................................25134.00348120000000000000000000010100111500000000000000000000000002100000200040111100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTCT.................................................................................................................................................26133.00336310010000000000000010000001002200000001000000001011201001100000010000010500000
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19133.003300300000000000000000000000000000000000000000000000000000000000030000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................23132.00320040011100000010011000001000020101000000000000000000000000040000000040125100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGCA..................................................................................................................................................25129.002900000000000000000000000000000000001125320000000000000000000000000002200000010010
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAT................................................................................................................................................27125.00250010000000002000000000001001000000100100000000000000000000000000043000000010244
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23124.002400171000000000000000000001000200100000000000000000000000000000000100100000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................23124.002410023000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19122.002200210000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGCC..................................................................................................................................................25122.002213000000000000000000000000000000000000000000000000010001000000000000001001500000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................23120.00200001000001000000000000000000000100000000000000000000022000100000000030142100010
...................................................................................................CCTCACCCGATTCTCAAAGGT...........................................................................................................................................................................21120.00200000000000000000000000011122013500000020000000000000000000001000100000000000000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................21120.00200050002000000000000000000101000000000000000001010000212010120000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................25120.00202005000000000000000000011010000000000000000000000000000000000000003210002010001
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................24118.00184010000100000000000001010000010000001000000000000000000000000000000120003000002
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................21118.00180020000000000000000000001100002300000006000000000000000000000000000030000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAG.................................................................................................................................................26118.00180000000000000000000000001011000010010100000000000000000000000000010300000010043
........................................................................................................................AAATATCAGCTGGTAATTCTGGTCC..................................................................................................................................................25116.00166000000000000000000000010000210200000001000000000000000000000000000000011100000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................22115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAGA.................................................................................................................................................26115.00150000000000000000000000000000000010000000000000000000000000000000032110010000024
........................................................................................................................AAATATCAGCTGGTAATTCTGGGACA.................................................................................................................................................26114.00140000001000000000000000000000000000055110000000000000000000000000000000000010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGATT.................................................................................................................................................26114.00140010000010000000000000100100000000010003000000000000000000000000010012000110000
........................................................................................................................AAATATCAGCTGGTAATTCA.......................................................................................................................................................20114.00140040000000000001001000010010030100000000000000000000000000001000000001000000000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................21113.00130000010000000000000000000000031000000000000000000000000000000000000000420100001
........................................................................................................................AAATATCAGCTGGTAATTCTGTC....................................................................................................................................................23113.00130020000000000000000000120010210201000001000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAG...................................................................................................................................................24112.00120000000000000000000000000001000010000000000000000000000000000000000200000020024
........................................................................................................................AAATATCAGCTGGTAATTCTGTCC...................................................................................................................................................24112.00121030000000000000000000000000110001000003000000000000000000000000000000000200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT.................................................................................................................................................26112.00121010000001000000000000001000020201011100000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................20111.00110023000000000000000000000000100100000001000000000000000000000000110001000000000
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18110.00100060000000000000000000001000000000000000000000000000000000000000000001002000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................22110.00100000010000000000000000000100000201000000000000000000000000000000110000000000012
.........................................................................................................................AATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................24110.00100000000000000000000000001011000001000010000000000000000000000000000030000110000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGAC....................................................................................................2319.0090000000000000000000000001000000000000000000000000000000000000030211000000000001
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1819.0090030000000000000000000000200101100000000000000000000000000010000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1919.0090040000000000020000000000000100100000001000000000000000000000000000000000000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGAG..................................................................................................................................................2319.0090000000002000000000000000000010000000000000000000000000000000100300002000000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2218.0081001000100000000000000000010000001000000000000000000000100000020000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................2418.0082013000000000000000000000000000000000000000000000000000000000000000000200000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2218.0080010000000000000000000000000110000000000000000000000000000000050000000000000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACAA..................................................................................................2418.0080010000000000000000000000000000000000000000000000000000000000000001200000000130
droGri2
CA---------------------------------------------------------------GAGAAAGAAAGAA------TGACG-------TCACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-ATCG--CAAA-AA---AAA-C---CCAAAA-------AAAAAC-A------------------AA---AGAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................2211301.00130112965
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................231828.0082879038
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................211455.004554487
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................201158.0015813622
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................21185.0085850
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................24152.00521933
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................22150.0050500
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................20141.0041410
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................24127.00271512
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................19116.0016151
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................23114.0014140
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19110.0010100
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................2318.00871
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................1818.00880
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2317.00770
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................2017.00770
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................1817.00716
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................1917.00770
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................2216.00651
.....................................................................................................TCACCCGATTCTCAAAGGT...........................................................................................................................................................................1915.00532
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................2114.00440
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2313.00321
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................2213.00330
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................2013.00330
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................2112.00211
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................2312.00220
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................2412.00220
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................2112.00220
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2312.00220
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................1912.00211
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................1811.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2511.00110
............................................................................AA------TGACG-------TCACCTCACCCGAT.....................................................................................................................................................................................2111.00101
.........................................................................................................................AATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................2411.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAGCA................................................................................................................................................2711.00110
.........................................................................................................................AATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................2411.00110
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................2011.00110
............................................................................................................................ATCAGCTGGTAATTCTGGA....................................................................................................................................................1911.00110
........................................................................................................................AAATATCAGCTGGTAATTCA.......................................................................................................................................................2011.00110
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................2411.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................2311.00110
.........................................................................................................................AATATCAGCTGGTAATTC........................................................................................................................................................1811.00110
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................2211.00110
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1811.00110
...............................................................................................................................................AGCAATGCC-AAATA--TGAAACACT..........................................................................................................................2311.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................2511.00110
..............................................................................................................................CAGCTGGTAATTCTGGGT...................................................................................................................................................1811.00110
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................1911.00110
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................2211.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGGGCT..................................................................................................................................................2511.00110
.........................................................................................................................AATATCAGCTGGTAATTCTGGGCA..................................................................................................................................................2411.00110
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................2311.00110
............................................................................................................................ATCAGCTGGTAATTCTGGGA...................................................................................................................................................2011.00110
droWil2
TGTGGC-----------------GAATGTATGAGTGGG----AA------T------GAGTGCGAG--------TG-GG--AG-GG-----------AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATATTTGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAAA-A-------A-AA---A----AA------------------AC-AAA------AAAAT----CAA---TCAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23138120.003812020191284587221011068
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22112828.0012828241119531955461
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2116394.0063941211432320673167
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2011551.0015513586465355232
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2411190.0011901463873058938
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2411182.0011821621625775150
....................................................................................................CTAACG-AATTCTCAAAGGT...........................................................................................................................................................................1911096.0010961764410056
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211006.00100629400595
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................211785.007850784010
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................191382.0038235129110
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................181304.003044512859
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201273.002733266031
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231258.00258113660709
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231202.002021611584914
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211100.001001741240
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................22190.00900325512
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20188.0088088000
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................22186.00861765130
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19170.00700491191
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24157.0057406173
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25154.005414241132
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19149.0049048001
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................21149.00491267141
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................24147.0047338051
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25141.00413111260
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................23140.00408140171
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18138.0038038000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24137.00373210112
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20137.0037130150
.....................................................................................................TAACG-AATTCTCAAAGGT...........................................................................................................................................................................18134.0034060280
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19132.0032131000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23125.0025124000
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22121.0021118020
...................................................................................................CCTAACG-AATTCTCAAAGGT...........................................................................................................................................................................20120.0020011180
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19118.0018018000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23118.0018015030
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20115.001577010
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21115.0015030111
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23114.001456030
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25114.001454221
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21113.001318022
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24112.0012010020
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................22111.001174000
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18110.0010010000
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................2318.00835000
....................................................................................................CTAACG-AATTCTCAAAGG............................................................................................................................................................................1818.00801070
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................2117.00701024
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2517.00714020
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1816.00605010
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................1816.00605010
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................2216.00651000
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................2215.00505000
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................2115.00505000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2115.00501040
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................2615.00502030
...............................................................................................................................................AGCTATGCCTAGATATTTGAAACACT..........................................................................................................................2615.00505000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................2414.00440000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................2614.00400040
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................2314.00400040
........................................................................................................................AAATATCAGCTGGTAATTCTGGTTT..................................................................................................................................................2514.00404000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2514.00422000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGC...................................................................................................................................................2314.00413000
....................................................................................................CTAACG-AATTCTCAAAGGG...........................................................................................................................................................................1913.00310020
...........................................................................................................................TATCAGCTGGTAATTCTGGGAG..................................................................................................................................................2213.00301020
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................2113.00303000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2313.00303000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................2313.00301020
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2213.00303000
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................2113.00300012
............................................................................................................................ATCAGCTGGTAATTCTGGGT...................................................................................................................................................2013.00310020
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2213.00302100
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT.................................................................................................................................................2612.00220000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTCT.................................................................................................................................................2612.00220000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGACT...................................................................................................2212.00202000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................2412.00201010
.............................................................................................................................................................................ATTTCAGTTGGTATCGAC....................................................................................................1812.00200020
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGA.....................................................................................................2012.00202000
.........................................................................................................................AATATCAGCTGGTAATTC........................................................................................................................................................1812.00211000
.................................................................................................................................................................GAAACACTCGGAATTTCAGTTGGT..........................................................................................................2412.00200200
........................................................................................................................AAATATCAGCTGGTAATTCA.......................................................................................................................................................2012.00202000
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................2312.00220000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................2212.00201001
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2212.00202000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA................................................................................................................................................2712.00202000
....................................................................................................CTAACG-AATTCTCAAAGGC...........................................................................................................................................................................1912.00200020
...........................................................................................................................TATCAGCTGGTAATTCTGGGT...................................................................................................................................................2112.00202000
.........................................................................................................................AATATCAGCTGGTAATTCTGGC....................................................................................................................................................2211.00101000
............................................................................................................................ATCAGCTGGTAATTCTGGGC...................................................................................................................................................2011.00110000
dp5
AGAGAG----------------------------------------------------AGTGCCAGA--------G-AA--AG-CGACGTCACGATTCACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA-GA---A----AA------------------AC-----------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22144277.004427725339343960366149102324553142213
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23137589.0037589562283582821703601891381237936245
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................21117234.0017234140140044549626512544591595155
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2112599.00259902566711001491
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2012208.002208317626461636311412615
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2411915.0019151295031421183278016315015
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211848.00184811806701410991
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................2011015.0010150100820001031
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................241660.006606286173554153862192
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231572.005722432741621674100
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221534.00534428174423321934
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................191311.00311156519525530120
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231240.00240399372145243350
...................................................................................................CCTCA--CGATTCTCAAAGGT...........................................................................................................................................................................191231.0023109720011301000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................221179.00179093413411011115
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................231157.001570271215400000
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................201136.00136013510000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................241125.00125121916310110
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211120.00120011230500000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................211116.00116065291307470
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25198.009865310120310130
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19193.009309300000000
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18191.009108730100000
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19180.0080048302801000
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19174.007407400000000
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22173.00732331220008160
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23166.006606310000020
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22161.006114512000030
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23156.005614540201210
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20154.005404620600000
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19150.005004721000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23141.004104010000000
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................23137.003700361000000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21135.003502301202160
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24130.003002440000200
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25128.002801650101320
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................21127.002702600000010
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................23124.002401500102060
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................22123.002301910000210
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24121.002101820100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20120.002001621000100
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................20119.001900145000000
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................18119.00190911332000
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................22118.001801700001000
....................................................................................................CTCA--CGATTCTCAAAGGT...........................................................................................................................................................................18117.001701510010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24117.00170830000141
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18116.001601600000000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21116.001601210000030
...............................................................................................................................................AGCTAAGC-AAGATA--TGAAACACT..........................................................................................................................23114.00140931100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................26114.001411210000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................23113.00130580000000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................21113.00130700000330
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18113.001301200000010
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................26113.001301020000100
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................23111.00110740000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................22111.001101000000010
........................................................................................................................AAATATCAGCTGGTAATTCTGAA....................................................................................................................................................2319.0090010000170
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1819.0090900000000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2119.0090900000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................2218.0080800000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................2517.0070430000000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGA.....................................................................................................2017.0070700000000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1917.0070520000000
...................................................................................................CCTCA--CGATTCTCAAAGGC...........................................................................................................................................................................1926.001200110010000
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................2116.0060600000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................2316.0060330000000
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................2116.0060150000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................2415.0051040000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2515.0050410000000
..................................................................................................ACCTCA--CGATTCTCAAAGGT...........................................................................................................................................................................2015.0050210200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................2614.0040010000120
........................................................................................................................AAATATCAGCTGGTAATTCTGTTT...................................................................................................................................................2414.0041200000010
........................................................................................................................AAATATCAGCTGGTAATTCTGCT....................................................................................................................................................2314.0040000310000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................2514.0040100000300
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTC..................................................................................................................................................2514.0040121000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2213.0030300000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGATT..................................................................................................................................................2513.0030000000030
.........................................................................................................................AATATCAGCTGGTAATTCTGGGC...................................................................................................................................................2313.0030210000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT.................................................................................................................................................2613.0030120000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................2213.0030210000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2213.0030300000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................2413.0030210000000
........................................................................................................................AAATATCAGCTGGTAATTCTGTC....................................................................................................................................................2313.0030000200010
.........................................................................................................................AATATCAGCTGGTAATTCTGGTT...................................................................................................................................................2313.0030300000000
.........................................................................................................................AATATCAGCTGGTAATTC........................................................................................................................................................1812.0020200000000
droPer2
-----------------------------------------------------------GTGCCAGA--------G-AA--AG-CGACGTCACGATTCACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAAA-GA---A----AA------------------AC-----------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................2215303.0053031435100331098
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................2314828.0048289002959818595141
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2113256.00325672924117591517
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................201577.005770343224810856
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................211354.0035403540000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................241306.003069412827151923
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................221222.0022212173001
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................241176.0017656521971428
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................191164.0016415190211
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201149.0014901481000
...................................................................................................CCTCA--CGATTCTCAAAGGT...........................................................................................................................................................................19192.009212656171
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................23187.008719548402
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................23180.008051215021
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................22168.00685542223
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................24136.00363321000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................22131.00310152239
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22127.002712141000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................21125.002501100014
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20123.00230230000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24122.00222011000
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................21121.00213171000
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19121.00214611000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20117.0017941012
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19116.00166100000
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19114.00140140000
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22113.00132110000
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................23113.0013661000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25112.0012271101
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18112.0012830100
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20112.0012056100
...............................................................................................................................................AGCTAAGC-AAGATA--TGAAACACT..........................................................................................................................23110.0010612010
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................2419.009081000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................2118.008080000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2318.008070001
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2318.008240110
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................1818.008032102
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................1816.006051000
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................1916.006060000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................2416.006040020
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................2216.006050001
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................2114.004040000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................2314.004040000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................2414.004130000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................2514.004040000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................2614.004040000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................2113.003020100
..................................................................................................ACCTCA--CGATTCTCAAAGGT...........................................................................................................................................................................2013.003021000
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................2313.003021000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................2513.003120000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2513.003120000
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................2213.003030000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................2112.002020000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2212.002020000
....................................................................................................CTCA--CGATTCTCAAAGGT...........................................................................................................................................................................1812.002020000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCC................................................................................................................................................2412.002200000
...........................................................................................................................TATCAGCTGGTAATTCTGGGA...................................................................................................................................................2112.002200000
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................1812.002020000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGG...................................................................................................................................................2312.002200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................2612.002110000
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................2211.001010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTC..................................................................................................................................................2511.001100000
...........................................................................................................................TATCAGCTGGTAATTCTGGA....................................................................................................................................................2011.001010000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1911.001010000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGT.....................................................................................................2211.001010000
...............................................................................................................................................AGCTAAGC-AAGATA--TGAAACACC..........................................................................................................................2311.001100000
........................................................................................................................AAATATCAGCTGGTAATTCG.......................................................................................................................................................2011.001010000
...........................................................................................................................................................................GAATTTCAGTTGGTATCGAA....................................................................................................2011.001000001
........................................................................................................................AAATATCAGCTGGTAATTGG.......................................................................................................................................................2011.001010000
.......................................................................................................................TAAATATCAGCTGGTAATTC........................................................................................................................................................2011.001010000
............................................................................................................................ATCAGCTGGTAATTCTGGGC...................................................................................................................................................2011.001100000
...................................................................................................CCTCA--CGATTCTCAAAGGTTC.........................................................................................................................................................................2111.001010000
........................................................................................................................AAATATCAGCTGGTAATTCTAA.....................................................................................................................................................2211.001010000
........................................................................................................................AAATATCAGCTGGTAATTCTGTTT...................................................................................................................................................2411.001010000
.............................................................................................................................................................................ATTTCAGTTGGTATCGACA...................................................................................................1911.001100000
...................................................................................................CCTCA--CGATTCTCAAAGGG...........................................................................................................................................................................1911.001100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA................................................................................................................................................2711.001010000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................2411.001100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2311.001010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................2611.001100000
...................................................................................................CCTCA--CGATTCTCAAAGG............................................................................................................................................................................1811.001010000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................2411.001010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................2511.001010000
droAna3
TGTGACTGT--GTGT------------------GTGTG----TG------T------GTGTGTGTG--------T-TAC--AG-TGT--TCAC----CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCACCAAA-AACTACCTAA-AA---A---------AAGCC----------GC-AAA------AAAAC----CACCC-AAAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22114194.00141941243016583215950
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23111215.00112158882153527532152339
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2117203.0072036767199611530131
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2012031.002031141395217874350
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................211837.0083783420001
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................221664.0066465620024
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................241496.004963037615275322
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201423.0042342200001
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................241363.003631381281366216
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221201.002011714231011
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................191148.0014845980104
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231100.0010065666611
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................23183.00832933100110
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20174.007462111000
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19174.00747400000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21163.00635205033
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................21161.00614746031
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................24153.005326260100
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25148.00483750132
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25148.00483420030
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................21148.00483450090
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22143.004316270000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................22143.004321130072
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19129.00291198010
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23128.00282600110
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22125.00251680010
...............................................................................................................................................AGCTATGCCTGATTA--TGAAACACT..........................................................................................................................24125.002512101011
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................18124.00241030083
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19124.00242400000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20121.00211600041
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................23121.002111100000
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18118.00181620000
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20116.00161301020
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................23115.00151400100
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19115.00151230000
.....................................................................................................TCACCTGATTCTTAAAGGT...........................................................................................................................................................................19114.0014622202
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................26114.00142120000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21113.0013922000
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................20113.00130130000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25112.0012540210
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23111.00111010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24111.00111000100
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23110.00101000000
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................1819.009900000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2518.008071000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................2618.008501011
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................2118.008800000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1917.007400111
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................2416.006600000
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................2315.005050000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2215.005500000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2315.005400010
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................1815.005410000
........................................................................................................................AAATATCAGCTGGTAATTCTGTTT...................................................................................................................................................2414.004400000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT.................................................................................................................................................2614.004022000
...................................................................................................CCTCACCTGATTCTTAAAGGT...........................................................................................................................................................................2113.003111000
...............................................................................................................................................AGCTATGCCTGATTA--TGAAACAC...........................................................................................................................2313.003210000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGA.....................................................................................................2013.003300000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................2113.003300000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................2213.003300000
.........................................................................................................................AATATCAGCTGGTAATTCTT......................................................................................................................................................2013.003300000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................2213.003210000
.........................................................................................................................AATATCAGCTGGTAATTCTGGC....................................................................................................................................................2213.003300000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT.................................................................................................................................................2613.003100002
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................2213.003300000
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................2212.002200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................2412.002110000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA.................................................................................................................................................2612.002020000
........................................................................................................................AAATATCAGCTGGTAATTCG.......................................................................................................................................................2012.002010100
.........................................................................................................................AATATCAGCTGGTAATTCTGGGC...................................................................................................................................................2312.002200000
........................................................................................................................AAATATCAGCTGGTAATTCTGCT....................................................................................................................................................2312.002001100
........................................................................................................................AAATATCAGCTGGTAATTCTAT.....................................................................................................................................................2212.002200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................2512.002200000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................2412.002200000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2212.002010001
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................2112.002010100
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2112.002200000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................2412.002100010
........................................................................................................................AAATATCAGCTGGTAATTCTTT.....................................................................................................................................................2212.002200000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGC.....................................................................................................2112.002200000
.............................................................................................................................TCAGCTGGTAATTCTGGGA...................................................................................................................................................1912.002110000
...............................................................................................................................................AGCTATGCCTGATTA--TGAAACA............................................................................................................................2212.002200000
droBip1
AATGACTGT--ATGT------------------GTGT--------------------------GTGT---------TAA--AG-TGT--TCAC----CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTCTGAATTGCATTTTATCACCAAAA-A-------A-AA-----------TTAAATAT-AA------AA-AAA------AAACG----CAA---ACAASizeHit CountTotal NormTotal
No Reads
droKik1
TGT--CTCTTAGAGTC-TCGGGCGAAAGTGAGAG----ATTAGC----------------------------AAAGAA-CCAG-TGT---CAC----CTCCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCGTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAGA-A-------A-AA---A----AA------------------AC--------------------AA---ACTASizeHit CountTotal NormTotal
No Reads
droFic1
TGC--------------TAGAGGGAAAGCAAGA-----A----G------TAAGAAAGA------------GAGAGAAA--AG-TG----------TCACCTCACAGGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAA-AAACCGAAAAC---CCAAACAC-AAAA-----TA--AAACCCC-AACG----CAA---AATASizeHit CountTotal NormTotal
No Reads
droEle1
AATGAGTGC--------TGGAGGGAAAGTAAT---AGGATTAAGA------------GA------------GGGAGAAA--AG-TG----------TCACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAA-AGCG--CAA-AAACTGAAA-----CCAAACAC-CAAC-----CA--AAACTTC-AGAACAATTCA---ACAASizeHit CountTotal NormTotal
No Reads
droRho1
CTAGAG----------------GGAAAGTAAGAGT----TTAAA----------------------------GGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CAA-AAACCGAAA-----CCAAACAC-CA-----------------------------A---AAAASizeHit CountTotal NormTotal
No Reads
droBia1
AA-----------------------------------------GA------------GA------------GAGAGAAA--AG-TG----------CCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A-AGCG--CA----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAAGAGATT--AAGA------------------GT----TTAAG------G------AA------------GAGAGAAA--AG-TGT-----C----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAAAAGCG--CAA-AAACCGAAA-----CCAAACACGCA--------------------AAA----CT----AAAASizeHit CountTotal NormTotal
No Reads
droEug1
AGT------------------------------------TTGAGA------------GA------------GAGAGAAA--AG-TGT-----C----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCAAAAAGCG--CAA-AAACCGAAA-----CCAA--------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
T------------------------------------------------------------------------------------G----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAAACG--------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................231453008.004530084010556735187563111750094841465102550372253485068103307105052641435214437620226551129151051472938707129669633587472011000000000000000009301061693109216010420423361943624138453282366701075217839845541121498973022713733134120301654251751165171705152021622538591752782054545293903005113818118974441132496472376711666016134655153610877563336217191764057805051135623958324537940569350837381212314669602401267279294159224126102952819301671461681153156329038100565441272148622109183641510557392814475934178164333080624674496011271123390832006244291535152157910423137314341970412283913236797678149089212489187175118446279251465127234410963515853263327534514459967593815985193062602791725962431967276306110125119251847242410611691616197233912928981091028109100257199945221326376283164994820272685641661494287709872893442561707725925047741095135482796136542
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................221142314.00142314000001020210320021005402601119136127934851322583921279208328359551963366437173660046100000000000000000372412278427080911556870511321371555581711232212678115439489355812002123111489622316212819154619215226526641245455612391942209128848229852484819290701869743051282314214721616045330232664577933816455127808127016188072758175324541212219323447284130282601100011311148149361421289551541703321633137307915107671449743271511014207310072510147144452364910528123739272578132777333371631323215696625148534522720740129232075444121514818473692591161112101101772311263664013514601755912400360012714923010231108212758411486313136275456562454705969280
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................24141705.00417050000000001000000000079100010000000312293291772512018114410332593690231300020100000000000000000131571106044105000001211002100053245600000201301141700001000234568091081204658321231051257410572721074114001160040016190110041306021029200070124227214910123370181752023821060020203523121933904522282331766290593256671267092019121190095490196100427913879301173843396230677288122743178150328918186283359140295094330141377816339711590773395531579072491243536544035610309385509522718953079418052398621115211137916897861586340160642835512018312145439213211710413167932527919410712992313355
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........................................................................................................................AAATATCAGCTGGTAAT..........................................................................................................................................................17179.007900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000257495018202300002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGCT...................................................................................................................................................24176.007600000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000202001200000000000000010210010010305001110021010000600150101101000000000011100000000000001000000000000000012010
.......................................................................................................................TAAATATCAGCTGGTAATT.........................................................................................................................................................19175.00750000000000000000000000000000000000000000000000000020000000000000000000000000100000000000000000000000100000100000010000000000010000000000000000000010000000000000000000001000000000000000000110000101000000000000002000100000100000000000000000100000001302100001020140000000000000001201100000000010001100000012001000200000003111317110
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................23174.00740000000100000000000000000000000000000000000000000000000011000000000000000000100000000001001000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000050141311200200000000000000000000000010100000101000010001000020010003001400201011003001000200011101010000301000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................24174.007400000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000001000000000000000000000000000000000000000000000000001223000300001311000000011001100050100100110020001000000000000010000000100001000000100010000200030100000000105010
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................25174.0074000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000022022220000000000000001000000130200000501000001000000000200050000000200100000000001012232640031300001201003010
........................................................................................................................AAATATCAGCTGGTAATTCTTT.....................................................................................................................................................22173.0073000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010002000013712000000030000000000000000000000000000000000000000000000000000100100010300000000000000010040131001101100001000000000000000000000000000020000000000000000000000000000000000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGATC...................................................................................................................................................25173.007300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................19168.00680000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000500000100000000000000000000000000000000000000000000010000000000000000001300002001401003010210223010000000000001100002000000010000000000011000000000000200001014060
........................................................................................................................AAATATCAGCTGGTAATTCTGCC....................................................................................................................................................23167.006700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100011100000000000010000000000000000000000000000000000000000000000000010000000000000000000000200101000041120001000000000000000000000000000000000001000010010000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAG..................................................................................................................................................25167.0067000000000000000000000010000000000000000000000010000000000000000000000000000010300000000000000000000000000000000000000000000000000000000006001000002020030000000000000000000000000010000000100002000001000010000000000100021322001000000000000000100000120000200001101002000001000000001000000100001000010000310220100001000001000002000
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20167.00670000000000000000000000000000001110000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000100000010000000000200000101000000000000000000000000000000000000000001401581336110100001000000000000110100000000000001000010000000100001000100001000000010000000000000000000001000000
........................................................................................................................AAATATCAGCTGGTAATTCTTCT....................................................................................................................................................23165.0065000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012304300120161101103100021000000100000010001000000000000000000010000000000000000000000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGTC....................................................................................................................................................23164.00640000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000110120001000000000002000000000000000000000000000000000000000000000000000000000000000000000030300000020001851601001114000000010002000010010000200000000000000000000000000001000000000000
droSim2
AATAGTACTTA--ATGT-----------------TGGGATTGAAAAAAAAAAAAAAAAA------------CAGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCGAAA-----CCAAACAC-CA-----------------------------C---AAAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................231236428.00236428161322819677333715293836916511426310495195672022368081
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22111173.001117325640368035443211272423025253421291761629121
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2119897.00989733142312116990311223103051816476158102312001
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2414990.004990241228476711194892392775322919100010
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2013817.003817984314101131351656834407162249414232512
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2412801.002801119216370640052754023023624725200000
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................1912092.002092567489694415640191560561055530
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................2311831.001831226363157230039534619293171702000
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................221839.0083946927100245226391671600000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................241559.00559735921040097897601400000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................211553.00553354281261189191733731000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................241413.0041341426600124169281902300000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................221364.003640014881461514012152687001
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231343.00343275412380063532617332000000
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................181342.003424501931563421677027224
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................211264.002640002541052110000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................251250.0025031117001615758532311000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................241244.00244275514120045022600000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................261205.002051064001911677618300000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................251190.001903377193001517777500000
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................221168.0016869488600146980000000
.....................................................................................................TCACACGATTCTCAAAGGT...........................................................................................................................................................................191166.001662014211031000754801000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................201154.00154292545110311130110015000
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................211151.0015141021055572055000010
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................231127.001277101760026373441300000
........................................................................................................................AAATATCAGCTGGTAAT..........................................................................................................................................................171121.001210000001000120000000
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................191118.001180324003131653600000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................221109.001090002004434743096000
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................20193.0093561761011100100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25192.00922118114003108132200000
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................22192.009240260120012117200000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................24190.00907116810002010000000
........................................................................................................................AAATATCAGCTGGTA............................................................................................................................................................15290.001800000003332169000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................22183.0083242116300611000200000
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................21173.0073028200015104221000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23171.00711226003314337000000
................................................................................................................................GCTGGTAATTCTGGG....................................................................................................................................................15167.0067000000774148000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................23164.00644419000232120900000
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20159.0059001300390628900000
...............................................................................................................................AGCTGGTAATTCTGGG....................................................................................................................................................16149.0049000000221737000000
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18146.0046100000440432100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................25146.0046234000279153100000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23145.0045116900146300500000
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20141.0041010390000000100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................23136.00360000001811111103000
..............................................................................................................................CAGCTGGTAATTCTGGG....................................................................................................................................................17133.0033000000132126000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATC.......................................................................................................19131.0031000027121000000000
.......................................................................................................................TAAATATCAGCTGGTAATTC........................................................................................................................................................20127.0027681001000011000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................22125.00250001001011200001000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA................................................................................................................................................27124.002400020016591000000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................21122.002290101043000004000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21121.002100110052741000000
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................23121.0021431400000000000000
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19121.002127470000001000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAG..................................................................................................................................................22116.001603200050222000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................24116.001652500010300000000
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................23116.0016101000011000300000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................25116.001653300010112000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................26116.001656300000002000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................24115.001577000001000000000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21114.001413090010000000000
........................................................................................................................AAATATCAGCTGGTAA...........................................................................................................................................................16113.0013000000000013000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGA....................................................................................................................................................24112.001211100035000100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................23112.001200012035000001000
......................................................................................................CACACGATTCTCAAAGGT...........................................................................................................................................................................18112.001201212000005100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA.................................................................................................................................................26111.001100000000442100000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23111.001101070001002000000
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22111.001134000022000000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCC................................................................................................................................................24110.0010001000000000000000
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19110.001000071200000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAG..................................................................................................................................................25110.001010100031210100000
....................................................................................................CTCACACGATTCTCAAAGGT...........................................................................................................................................................................20110.001000000001005400000
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................21110.001043200000000100000
........................................................................................................................AAATATCAGCTGGTAATTCTAA.....................................................................................................................................................2219.00900000020520000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTAT........................................................................................................1818.00802003201000000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2518.00812000010020200000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2217.00710400010001000000
...............................................................................................................................AGCTGGTAATTCTGG.....................................................................................................................................................1517.00700000000007000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAAA...................................................................................................2317.00700000020500000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2217.00700070000000000000
...............................................................................................................................AGCTGGTAATTCTGGGT...................................................................................................................................................1717.00700000000007000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTC..................................................................................................................................................2516.00610300002000000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCTT...............................................................................................................................................2516.00611400000000000000
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................1816.00600040000002000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGA...................................................................................................................................................2116.00620000001201000000
........................................................................................................................AAATATCAGCTGGTAATTCTAAA....................................................................................................................................................2316.00600000000600000000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGAC....................................................................................................2316.00600001012110000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT.................................................................................................................................................2616.00610000011120000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT.................................................................................................................................................2616.00612000000201000000
...............................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT..........................................................................................................................2415.00501011000001100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACAA..................................................................................................2415.00500000000000014000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGT.....................................................................................................2114.00401000000000003000
...........................................................................................................................TATCAGCTGGTAATTCTGGGT...................................................................................................................................................2114.00400200000002000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2214.00412100000000000000
..................................................................................................................................................TAAGCCTAAATA--TGAAACACTCGGAATT...................................................................................................................2814.00400000011200000000
.......................................................................................................................TAAATATCAGCTGGTAATT.........................................................................................................................................................1914.00420000000001000001
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................1914.00400040000000000000
.............................................................................................................................TCAGCTGGTAATTCTGG.....................................................................................................................................................1714.00400000011002000000
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1814.00400010020001000000
................................................................................................................................GCTGGTAATTCTGGGA...................................................................................................................................................1614.00400000000013000000
........................................................................................................................AAATATCAGCTGGTAATTCA.......................................................................................................................................................2014.00400000010003000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCG................................................................................................................................................2414.00401300000000000000
...............................................................................................................................................AGCTAAGCCTAAATA--TGAAACACTCG........................................................................................................................2614.00400004000000000000
.............................................................................................................................TCAGCTGGTAATTCTGGGT...................................................................................................................................................1914.00400000000004000000
............................................................................................................................ATCAGCTGGTAATTCTG......................................................................................................................................................1714.00400000000004000000
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................2014.00421000000001000000
.............................................................................................................................TCAGCTGGTAATTCTGGGA...................................................................................................................................................1914.00410000001002000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................2414.00431000000000000000
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................2114.00400040000000000000
............................................................................................................................ATCAGCTGGTAATTCT.......................................................................................................................................................1614.00400000010003000000
........................................................................................................................AAATATCAGCTGGTAATTCTGAA....................................................................................................................................................2313.00320000000100000000
droSec2
T------------------------------------------------------------------------------------G----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCGAAA-----CC----------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23131618.0031618200677279911913
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22119683.0019683192265236441
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2114722.004722434982110181
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2413677.0036776976272180173
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2411777.001777298389978112
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211666.0016661551139111
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2011428.001428564250134480
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2111261.0012611257130
.....................................................................................................TCACACGATTCTCAAAGGT...........................................................................................................................................................................191587.0058727652331
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231383.00383271266620
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201308.00308303131
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................181198.0019881614727
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................251183.0018385394217
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231179.00179106203914
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................201168.00168167010
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211161.001611117430
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221130.001309511321
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23199.009996120
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24193.0093470442
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................22191.00912614510
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................21187.00874824141
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23177.007761763
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21168.006859207
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................19164.0064432811
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25160.00601221189
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19153.0053273221
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23153.00532614130
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25149.00491214221
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................23147.004733293
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................21145.0045167616
....................................................................................................CTCACACGATTCTCAAAGGT...........................................................................................................................................................................20145.004522374
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................22143.004331435
......................................................................................................CACACGATTCTCAAAGGT...........................................................................................................................................................................18141.004150324
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20140.0040280111
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19136.003633120
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................23134.003447230
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24130.003021072
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................24130.003014790
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20128.002819621
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................26127.002713833
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19127.002725020
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19124.002424000
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................21122.002222000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24122.002221100
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18120.002020000
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22118.001817010
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................22116.001615010
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................25113.00134270
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22113.001311011
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................22113.00136250
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................22112.001210200
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA.................................................................................................................................................26111.001110100
...........................................................................................................................TATCAGCTGGTAATTCTGGGAG..................................................................................................................................................22110.00101171
........................................................................................................................AAATATCAGCTGGTAATTCTTT.....................................................................................................................................................2218.0087001
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................1818.0088000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2518.0080341
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................2418.0082060
........................................................................................................................AAATATCAGCTGGTAATTCTGGAT...................................................................................................................................................2418.0085120
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGT....................................................................................................................................................2417.0073040
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2117.0073130
...................................................................................................CCTCACACGATTCTCAAAGGT...........................................................................................................................................................................2117.0070070
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2517.0073040
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2217.0077000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................2316.0064110
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................2316.0065001
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................1816.0065010
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGA.....................................................................................................2015.0054010
.........................................................................................................................AATATCAGCTGGTAATTCTGGC....................................................................................................................................................2215.0054100
.......................................................................................................................TAAATATCAGCTGGTAATTC........................................................................................................................................................2015.0052201
...........................................................................................................................TATCAGCTGGTAATTCTGGGT...................................................................................................................................................2115.0053020
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT.................................................................................................................................................2615.0051121
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2315.0054100
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCG......................................................................................................2115.0055000
............................................................................................................................ATCAGCTGGTAATTCTGGGA...................................................................................................................................................2015.0051040
.............................................................................................................................................................................ATTTCAGTTGGTATCGAC....................................................................................................1814.0040040
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTA.................................................................................................................................................2614.0042101
........................................................................................................................AAATATCAGCTGGTAATTCTGGGATT.................................................................................................................................................2614.0041210
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAC..................................................................................................................................................2514.0041021
........................................................................................................................AAATATCAGCTGGTAATTCA.......................................................................................................................................................2014.0041012
...........................................................................................................................TATCAGCTGGTAATTCTGGGA...................................................................................................................................................2114.0040130
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................2014.0042002
...............................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT..........................................................................................................................2413.0032010
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2213.0031110
........................................................................................................................AAATATCAGCTGGTAATTCTGGTTT..................................................................................................................................................2513.0033000
.........................................................................................................................AATATCAGCTGGTAATTC........................................................................................................................................................1813.0033000
........................................................................................................................AAATATCAGCTGGTAATTCTTC.....................................................................................................................................................2213.0033000
..........................................................................................................................ATATCAGCTGGTAATTCTGGT....................................................................................................................................................2113.0033000
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................1813.0031011
droYak3
T------------------------------------------------------------------------------------G----------TCACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACCAACCGAAA-----CCAAACAC-CA----------CA------AAAAA----CAATCAACATSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23173417.0073417874154794930872143184163002262
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22130577.0030577117177371252992141210282
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................2116528.006528849495763345314260001
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2412451.0024518232295126064154001734
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2411753.0017538220272113352797000486
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................1911304.001304211259490331201847
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2111221.00122101212810000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211175.001175211313570000000
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2011126.001126117611632215577161154
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................231439.004392941980100000
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231422.00422171642061716100001
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................221398.00398076303110080000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................241350.00350381029190010001
.....................................................................................................TTACACGATTCTCAAAGGT...........................................................................................................................................................................191336.003362511571121580000
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201320.003201317000010001
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231274.00274748793171110000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................211183.00183049104511900014
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................191119.0011904545270020000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................251115.00115471923132300017
........................................................................................................................AAATATCAGCTGGTAATTCTGAC....................................................................................................................................................231111.001113010800000000
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................221101.001010198200000000
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211100.001003691580140000
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................22193.00933731102220000
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................20188.00880751300000000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23179.00790502900000000
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................18178.007821437003120370
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24165.00651203850010000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25159.00592424101800019
.....................................................................................................TTACACGATTCTCAAAGGC...........................................................................................................................................................................19151.0051114900000000
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19151.0051050010000000
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18151.0051046410000000
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22150.00509241700000000
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20148.00480251850000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24141.00411821330000005
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20135.00357111410020000
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................20134.0034013300000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................23132.0032222440000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23127.0027022200010002
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23127.0027121210110000
....................................................................................................CTTACACGATTCTCAAAGGT...........................................................................................................................................................................20126.0026021660020000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................26126.0026015000100019
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................23125.0025071800000000
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19123.0023020300000000
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19122.0022319000000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25118.001856111310000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................23118.0018001700010000
......................................................................................................TACACGATTCTCAAAGGT...........................................................................................................................................................................18118.001814850000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................26117.0017114100100000
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................21117.0017013101020000
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................22117.0017311300000000
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................21116.0016001501000000
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................18115.0015012300000000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21114.001418410000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24114.0014013100000000
................................................................................................................................................................TGAAACACTCGGAATTTCAGTTGGTAT........................................................................................................27114.0014000000000014
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGCT................................................................................................................................................24112.001250610000000
...............................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT..........................................................................................................................24111.001105600000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................22111.0011011000000000
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18110.001027010000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2518.00821400100000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGA.....................................................................................................2018.00806200000000
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................2117.00704100020000
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2117.00706000010000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................2217.00702500000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2217.00707000000000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACC...................................................................................................2316.00600600000000
............................................................................................................................ATCAGCTGGTAATTCTGGGA...................................................................................................................................................2016.00601200030000
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2515.00501210100000
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA....................................................................................................2214.00400400000000
....................................................................................................CTTACACGATTCTCAAAGGC...........................................................................................................................................................................2014.00400400000000
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1914.00411200000000
............................................................................................................................ATCAGCTGGTAATTCTGGGT...................................................................................................................................................2014.00400200020000
droEre2
ATAG-TAATTA--ATGT-----------------TAAGATTGGAA------------GA-------------AGAGAAA--AG-TG----------TCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA-AGCG--CAACAAACCG--------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................AAATATCAGCTGGTAATTCTGGG....................................................................................................................................................23125414.002541415648260874256452216922306
........................................................................................................................AAATATCAGCTGGTAATTCTGG.....................................................................................................................................................22125109.002510923725107073259107109
........................................................................................................................AAATATCAGCTGGTAATTCTG......................................................................................................................................................21114662.001466213881137847161316112
........................................................................................................................AAATATCAGCTGGTAATTCT.......................................................................................................................................................2013236.003236161821312279073816
........................................................................................................................AAATATCAGCTGGTAATTCTGGGT...................................................................................................................................................2412766.00276632145111023541661767
.........................................................................................................................AATATCAGCTGGTAATTCTGG.....................................................................................................................................................2111696.0016961694000110
.........................................................................................................................AATATCAGCTGGTAATTCTGGG....................................................................................................................................................2211219.00121911852063716
.........................................................................................................................AATATCAGCTGGTAATTCTG......................................................................................................................................................201984.00984984000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGA...................................................................................................................................................241956.009562146987841715614
........................................................................................................................AAATATCAGCTGGTAATTCTGGT....................................................................................................................................................231530.0053017294763633200
........................................................................................................................AAATATCAGCTGGTAATTCTGT.....................................................................................................................................................221300.0030021912150270
........................................................................................................................AAATATCAGCTGGTAATTCTT......................................................................................................................................................211229.002292120016100
........................................................................................................................AAATATCAGCTGGTAATTCTGGA....................................................................................................................................................231173.0017389102583821
........................................................................................................................AAATATCAGCTGGTAATTC........................................................................................................................................................191152.0015246591021250
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC....................................................................................................221118.001186023022490
.....................................................................................................TCACACGATTCTCAAAGGT...........................................................................................................................................................................191113.00113431011324220
..........................................................................................................................ATATCAGCTGGTAATTCTGG.....................................................................................................................................................201113.00113105700100
..........................................................................................................................ATATCAGCTGGTAATTCTGGG....................................................................................................................................................211107.00107764120312
........................................................................................................................AAATATCAGCTGGTAATT.........................................................................................................................................................18179.00791000235320
........................................................................................................................AAATATCAGCTGGTAATTCTGGC....................................................................................................................................................23171.00712815150211
.........................................................................................................................AATATCAGCTGGTAATTCT.......................................................................................................................................................19171.007171000000
.........................................................................................................................AATATCAGCTGGTAATTCTGGGT...................................................................................................................................................23157.0057180000039
............................................................................................................................ATCAGCTGGTAATTCTGGG....................................................................................................................................................19156.0056161030342
.......................................................................................................................TAAATATCAGCTGGTAATTCTGG.....................................................................................................................................................23148.004840100007
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAT..................................................................................................................................................25148.0048500012328
..........................................................................................................................ATATCAGCTGGTAATTCTG......................................................................................................................................................19146.004645000010
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGA.....................................................................................................21146.004628701730
.........................................................................................................................AATATCAGCTGGTAATTCTGGGA...................................................................................................................................................23142.0042260101500
........................................................................................................................AAATATCAGCTGGTAATTCTGA.....................................................................................................................................................22141.004138100110
........................................................................................................................AAATATCAGCTGGTAATTCTGGGAA..................................................................................................................................................25140.004044102380
.........................................................................................................................AATATCAGCTGGTAATTCTGT.....................................................................................................................................................21137.003737000000
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTT..................................................................................................................................................25129.002914100914
.......................................................................................................................TAAATATCAGCTGGTAATTCTG......................................................................................................................................................22128.002826000020
.......................................................................................................................TAAATATCAGCTGGTAATTCTGGG....................................................................................................................................................24128.002821004120
............................................................................................................................ATCAGCTGGTAATTCTGG.....................................................................................................................................................18127.002725101000
........................................................................................................................AAATATCAGCTGGTAATTCTGC.....................................................................................................................................................22125.002517800000
........................................................................................................................AAATATCAGCTGGTAATTCTA......................................................................................................................................................21124.002423000010
.......................................................................................................................TAAATATCAGCTGGTAATTCT.......................................................................................................................................................21123.002310000292
........................................................................................................................AAATATCAGCTGGTAATTCTGGGC...................................................................................................................................................24122.002210610113
...........................................................................................................................TATCAGCTGGTAATTCTGGG....................................................................................................................................................20119.001912104020
..........................................................................................................................ATATCAGCTGGTAATTCTGGGT...................................................................................................................................................22119.001900011116
........................................................................................................................AAATATCAGCTGGTAATTCTGTT....................................................................................................................................................23117.001730011300
........................................................................................................................AAATATCAGCTGGTAATTCTGGTT...................................................................................................................................................24114.00147012013
........................................................................................................................AAATATCAGCTGGTAATTCTC......................................................................................................................................................21114.001410200110
...........................................................................................................................TATCAGCTGGTAATTCTG......................................................................................................................................................18113.001313000000
......................................................................................................CACACGATTCTCAAAGGT...........................................................................................................................................................................18113.00137301020
........................................................................................................................AAATATCAGCTGGTAATTCTGGGG...................................................................................................................................................24113.00133002008
...........................................................................................................................TATCAGCTGGTAATTCTGG.....................................................................................................................................................19112.001212000000
....................................................................................................CTCACACGATTCTCAAAGGT...........................................................................................................................................................................20112.00123303210
........................................................................................................................AAATATCAGCTGGTAATTCTTT.....................................................................................................................................................22112.001212000000
..........................................................................................................................ATATCAGCTGGTAATTCT.......................................................................................................................................................18110.00105101030
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCG......................................................................................................20110.00106000400
.........................................................................................................................AATATCAGCTGGTAATTCTGGT....................................................................................................................................................2219.0097000101
........................................................................................................................AAATATCAGCTGGTAATTCC.......................................................................................................................................................2019.0090800100
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA...................................................................................................2319.0090300006
........................................................................................................................AAATATCAGCTGGTAATTCTGGAC...................................................................................................................................................2419.0090000009
............................................................................................................................ATCAGCTGGTAATTCTGGGT...................................................................................................................................................2018.0080000008
........................................................................................................................AAATATCAGCTGGTAATTT........................................................................................................................................................1918.0083000140
.........................................................................................................................AATATCAGCTGGTAATTCTGGA....................................................................................................................................................2217.0077000000
...........................................................................................................................TATCAGCTGGTAATTCTGGGAGC.................................................................................................................................................2317.0071202020
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTA..................................................................................................................................................2517.0075001100
.............................................................................................................................TCAGCTGGTAATTCTGGG....................................................................................................................................................1817.0074001110
..........................................................................................................................................................................GGAATTTCAGTTGGTATCGAC....................................................................................................2117.0075000200
.........................................................................................................................AATATCAGCTGGTAATTCTGA.....................................................................................................................................................2116.0066000000
........................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA.....................................................................................................2216.0064100100
.........................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT...................................................................................................2316.0064100100
........................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT.................................................................................................................................................2615.0053001100
..........................................................................................................................ATATCAGCTGGTAATTCTGGGA...................................................................................................................................................2215.0050102200
........................................................................................................................AAATATCAGCTGGTAATTCAA......................................................................................................................................................2114.0044000000

Generated: 10/20/2015 at 11:18 PM