dmo-mir-10

Antisense to intron [Dmoj\GI22893-in]; pre_miRNA [Dmoj\mir-10-RM]; utr3 [utr3_minus_6887]; miRNA [Dmoj\miR-10-RA]

TACATTAATATGCATATAAATATGAATGCATGTCTAAGTTCCACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCTTTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAATCGAATGTGAATCGTGAGTGTTCGGTGCTCTATA *****************************************...((..((((((..(((((.((((.(((((((((((................))))))))))).)))).)).)))..))))))..)).....***************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M060 embryo	M046 female body	V110 male body	V041 embryo	V056 head	V049 head
..........................................................ACCCTGTAGATCCGAATTTGTT.................................................................................................	22	0	1	438052.00	438052	370003	28798	23109	14157	1280	705
..................................................................................................CAAATTCGGTTCTAGAGAGGTTT........................................................	23	0	1	323963.00	323963	230117	70958	17222	2759	1932	975
..........................................................ACCCTGTAGATCCGAATTTGTC.................................................................................................	22	1	1	32440.00	32440	32127	107	186	11	8	1
..................................................................................................CAAATTCGGTTCTAGAGAGGTT.........................................................	22	0	1	25263.00	25263	14784	6731	2882	213	433	220
..........................................................ACCCTGTAGATCCGAATTTGT..................................................................................................	21	0	1	18452.00	18452	12962	2799	1715	342	407	227
..........................................................ACACTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	18122.00	18122	18023	9	15	66	6	3
..........................................................AGCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	15810.00	15810	15805	1	0	2	1	1
..................................................................................................CGAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	12179.00	12179	12145	16	4	11	3	0
..........................................................ACCTTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	11665.00	11665	11642	1	7	14	0	1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTC........................................................	23	1	1	9935.00	9935	9869	33	21	6	4	2
..................................................................................................CAATTTCGGTTCTAGAGAGGTTT........................................................	23	1	1	9392.00	9392	9385	2	5	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGT..........................................................	21	0	1	9328.00	9328	1370	3982	3365	41	377	193
..........................................................ACCCTGTAGATCCGAATTTGTTT................................................................................................	23	1	1	8847.00	8847	7073	769	629	309	45	22
...................................................................................................AAATTCGGTTCTAGAGAGGTTT........................................................	22	0	1	6883.00	6883	1018	5710	118	22	10	5
..................................................................................................CAAATTCGGTTCTAGAGAGG...........................................................	20	0	1	5866.00	5866	178	2579	2589	31	358	131
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.......................................................	24	1	1	5425.00	5425	3217	930	957	175	90	56
..........................................................ACCCTGTAGATCCGAATTTGTTC................................................................................................	23	1	1	4179.00	4179	2524	964	633	21	19	18
..........................................................ATCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	2867.00	2867	2835	5	15	8	1	3
...........................................................CCCTGTAGATCCGAATTTGTT.................................................................................................	21	0	1	2843.00	2843	194	2637	2	9	1	0
..........................................................ACCCTGTAGATCCGAATTTGC..................................................................................................	21	1	1	2280.00	2280	2272	3	3	0	2	0
..........................................................ACCCTGTAGATCCGAATTTTTT.................................................................................................	22	1	1	2228.00	2228	2175	23	11	10	6	3
..........................................................ACTCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	2120.00	2120	2099	5	7	9	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTT........................................................	23	1	1	2066.00	2066	1987	44	12	15	5	3
.........................................................TACCCTGTAGATCCGAATTTGT..................................................................................................	22	0	1	1906.00	1906	1707	87	45	50	10	7
..................................................................................................CTAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	1897.00	1897	1894	1	0	1	0	1
..........................................................ACCCTGTCGATCCGAATTTGTT.................................................................................................	22	1	1	1838.00	1838	1827	0	3	6	1	1
..........................................................TCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	1708.00	1708	1700	2	1	4	1	0
..........................................................ACCCTTTAGATCCGAATTTGTT.................................................................................................	22	1	1	1681.00	1681	1658	5	16	1	0	1
..........................................................ACACTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	1472.00	1472	1472	0	0	0	0	0
..........................................................ACCCTGTAGATCAGAATTTGTT.................................................................................................	22	1	1	1405.00	1405	1372	0	8	20	4	1
..........................................................AGCCTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	1283.00	1283	1282	0	0	1	0	0
..................................................................................................TAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	1261.00	1261	1224	13	6	6	8	4
..........................................................ACCCTGTAGATACGAATTTGTT.................................................................................................	22	1	1	1225.00	1225	1107	84	9	23	1	1
..........................................................ACCCTGTAGATCCGCATTTGTT.................................................................................................	22	1	1	1174.00	1174	797	0	5	329	11	32
..........................................................ACCTTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	1121.00	1121	1121	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGGT.................................................................................................	22	1	1	1121.00	1121	1096	1	3	17	0	4
..........................................................ACGCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	988.00	988	977	4	1	6	0	0
..........................................................ACCCTGTAGATCCGATTTTGTT.................................................................................................	22	1	1	976.00	976	950	1	8	14	3	0
..........................................................ACCCTGGAGATCCGAATTTGTT.................................................................................................	22	1	1	908.00	908	827	1	2	70	5	3
.........................................................CACCCTGTAGATCCGAATTTGTT.................................................................................................	23	1	1	863.00	863	835	26	0	1	0	1
..................................................................................................CAAATTCGTTTCTAGAGAGGTTT........................................................	23	1	1	804.00	804	760	24	17	0	0	3
..................................................................................................CAAATTCTGTTCTAGAGAGGTTT........................................................	23	1	1	798.00	798	732	30	35	0	1	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTC.........................................................	22	1	1	784.00	784	725	20	36	0	2	1
..........................................................ACCCTGTAGATCCGAATTTG...................................................................................................	20	0	1	692.00	692	124	371	131	10	36	20
..................................................................................................CGAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	690.00	690	685	2	1	0	1	1
..........................................................ACCCTGTACATCCGAATTTGTT.................................................................................................	22	1	1	682.00	682	672	1	3	5	1	0
..................................................................................................CAATTTCGGTTCTAGAGAGGTT.........................................................	22	1	1	662.00	662	662	0	0	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGTT.........................................................	21	0	1	625.00	625	54	534	31	0	3	3
..........................................................ACACTGTAGATCCGAATTTGT..................................................................................................	21	1	1	621.00	621	614	1	2	2	1	1
..................................................................................................CGAATTCGGTTCTAGAGAGGTTC........................................................	23	2	1	578.00	578	578	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTA................................................................................................	23	1	1	574.00	574	448	82	30	8	4	2
..........................................................AGCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	562.00	562	561	0	0	1	0	0
..................................................................................................CAAATTCGGTTATAGAGAGGTTT........................................................	23	1	1	556.00	556	372	175	6	3	0	0
..................................................................................................CAAATTCGGCTCTAGAGAGGTTT........................................................	23	1	1	553.00	553	440	47	25	14	19	8
..................................................................................................CAAATTCGGTTCTAGATAGGTTT........................................................	23	1	1	547.00	547	479	34	27	1	3	3
..................................................................................................CACATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	544.00	544	532	1	9	1	0	1
..................................................................................................CAAATTCGGTTCTAGAGAGTTTT........................................................	23	1	1	529.00	529	471	36	17	1	2	2
..................................................................................................CAAATTCGGTTCTAGAGATGTTT........................................................	23	1	1	498.00	498	458	17	16	1	0	6
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.......................................................	24	1	1	474.00	474	212	147	104	2	5	4
....................................................................................................AATTCGGTTCTAGAGAGGTTT........................................................	21	0	1	471.00	471	159	305	7	0	0	0
..................................................................................................CAAATTCGGGTCTAGAGAGGTTT........................................................	23	1	1	443.00	443	394	13	4	4	17	11
..........................................................ACCTTGTAGATCCGAATTTGT..................................................................................................	21	1	1	428.00	428	427	0	0	0	1	0
..........................................................ACCCTGTATATCCGAATTTGTT.................................................................................................	22	1	1	423.00	423	388	9	19	6	1	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.......................................................	24	0	1	420.00	420	242	120	43	6	6	3
..........................................................ACCCCGTAGATCCGAATTTGTT.................................................................................................	22	1	1	410.00	410	373	5	10	19	1	2
..................................................................................................CAATTTCGGTTCTAGAGAGGTTC........................................................	23	2	1	407.00	407	407	0	0	0	0	0
..................................................................................................CAAATGCGGTTCTAGAGAGGTTT........................................................	23	1	1	406.00	406	391	0	0	7	6	2
..........................................................ACCCTGTAGATTCGAATTTGTT.................................................................................................	22	1	1	403.00	403	362	19	11	8	3	0
..........................................................ACCCTGTAGATCCGAATTTGTA.................................................................................................	22	1	1	403.00	403	382	10	9	2	0	0
..................................................................................................CAAATTCGGTTCTAGTGAGGTTT........................................................	23	1	1	397.00	397	388	5	1	2	1	0
..........................................................ACCCTGTAGATCCGAATTTTT..................................................................................................	21	1	1	395.00	395	390	2	1	0	1	1
..........................................................ACCCTGTAGATCCAAATTTGTT.................................................................................................	22	1	1	377.00	377	328	17	21	9	2	0
..................................................................................................CAAATTCGGTTGTAGAGAGGTTT........................................................	23	1	1	370.00	370	26	343	0	1	0	0
..........................................................ACACTGTAGATCCGAATTTGTTT................................................................................................	23	2	1	360.00	360	357	1	0	1	1	0
.................................................................................................CCAAATTCGGTTCTAGAGAGGTTT........................................................	24	1	1	340.00	340	284	54	2	0	0	0
..................................................................................................CAAATTCAGTTCTAGAGAGGTTT........................................................	23	1	1	335.00	335	292	20	13	6	2	2
.........................................................TACCCTGTAGATCCGAATTTGC..................................................................................................	22	1	1	335.00	335	335	0	0	0	0	0
..........................................................AGCCTGTAGATCCGAATTTGTTT................................................................................................	23	2	1	333.00	333	332	0	0	1	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGT..........................................................	20	0	1	327.00	327	4	309	9	0	4	1
..................................................................................................CAAATTCGGTTCTAGAGAG............................................................	19	0	1	325.00	325	7	164	123	2	18	11
..........................................................AGCTTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	322.00	322	322	0	0	0	0	0
..................................................................................................CGATTTCGGTTCTAGAGAGGTTT........................................................	23	2	1	300.00	300	300	0	0	0	0	0
..........................................................ACCCTGTAGACCCGAATTTGTT.................................................................................................	22	1	1	299.00	299	260	6	12	20	0	1
..........................................................GCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	297.00	297	237	21	13	25	1	0
..........................................................ACCCTGTAGATCCGAATTTGCT.................................................................................................	22	1	1	281.00	281	201	6	20	45	6	3
..................................................................................................CAAATTCGGTTCTAGAGAGTTT.........................................................	22	1	1	269.00	269	246	8	12	0	2	1
..........................................................ACCCTGTAGATGCGAATTTGTT.................................................................................................	22	1	1	261.00	261	95	159	2	5	0	0
..........................................................ACCCTGTAGATCCTAATTTGTT.................................................................................................	22	1	1	258.00	258	222	9	22	5	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGCTT........................................................	23	1	1	257.00	257	159	46	21	15	13	3
..........................................................ACCCTGTAGATCCGAATTTGTTTC...............................................................................................	24	2	1	244.00	244	73	105	64	0	1	1
..........................................................ACCCTGTGGATCCGAATTTGTT.................................................................................................	22	1	1	240.00	240	191	4	14	26	4	1
...................................................................................................AAATTCGGTTCTAGAGAGG...........................................................	19	0	1	237.00	237	1	213	21	0	1	1
..................................................................................................CAAATTCCGTTCTAGAGAGGTTT........................................................	23	1	1	229.00	229	211	11	7	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGGGTTT........................................................	23	1	1	227.00	227	180	30	8	5	3	1
..........................................................ACACTGTCGATCCGAATTTGTT.................................................................................................	22	2	1	225.00	225	225	0	0	0	0	0
..........................................................ACCTTGTAGATCCGAATTTGTTT................................................................................................	23	2	1	225.00	225	223	0	0	1	1	0
...........................................................CCCTGTAGATCCGAATTTGT..................................................................................................	20	0	1	220.00	220	6	214	0	0	0	0
..................................................................................................CAAATTCGGATCTAGAGAGGTTT........................................................	23	1	1	216.00	216	192	7	8	4	4	1
..........................................................ACCCTGTAGATCCGAATTTTTTT................................................................................................	23	2	1	215.00	215	209	3	3	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTG........................................................	23	1	1	215.00	215	196	9	7	1	1	1
..........................................................ATCCTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	214.00	214	213	0	0	1	0	0
..........................................................ACCCTGCAGATCCGAATTTGTT.................................................................................................	22	1	1	214.00	214	176	6	12	15	4	1
..........................................................ACCCTGTAGAACCGAATTTGTT.................................................................................................	22	1	1	213.00	213	201	7	2	3	0	0
..................................................................................................CAAATTCGGTTCTAGGGAGGTTT........................................................	23	1	1	211.00	211	147	51	7	3	2	1
..................................................................................................CAAATTCGGTTCTAGAGAGGC..........................................................	21	1	1	206.00	206	197	7	2	0	0	0
..................................................................................................CAAATTTGGTTCTAGAGAGGTTT........................................................	23	1	1	203.00	203	169	12	16	3	2	1
..................................................................................................CAAATTCGGTTCTAGAGAGGATT........................................................	23	1	1	203.00	203	149	28	15	7	1	3
..........................................................ACTCTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	202.00	202	202	0	0	0	0	0
............................................................CCTGTAGATCCGAATTTGTT.................................................................................................	20	0	1	199.00	199	83	107	7	2	0	0
..................................................................................................CAAATTCGGTTCTAGAGGTTT..........................................................	21	3	1	189.00	189	158	12	17	0	1	1
.........................................................TACCCTGTAGATCCGAATTTGTT.................................................................................................	23	0	1	186.00	186	135	38	5	7	1	0
..........................................................ACCCTGTAGATCCGGATTTGTT.................................................................................................	22	1	1	183.00	183	132	6	5	39	0	1
..........................................................ACCCTGTCGATCCGAATTTGTC.................................................................................................	22	2	1	179.00	179	179	0	0	0	0	0
..................................................................................................CAAATTCGCTTCTAGAGAGGTTT........................................................	23	1	1	177.00	177	168	3	3	0	3	0
..................................................................................................CAAATTCGGTTTTAGAGAGGTTT........................................................	23	1	1	177.00	177	108	59	4	4	1	1
..........................................................ACCCTGTAGATCCGAATTTT...................................................................................................	20	1	1	175.00	175	170	3	2	0	0	0
..........................................................ACCCTGTAGATCTGAATTTGTT.................................................................................................	22	1	1	175.00	175	121	3	22	26	1	2
..........................................................ACCCTGTAGATCCGAATTGGTT.................................................................................................	22	1	1	170.00	170	166	0	0	2	1	1
..........................................................TCCCTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	170.00	170	170	0	0	0	0	0
..................................................................................................CGAATTCGGTTCTAGAGAGGTTTT.......................................................	24	2	1	167.00	167	164	1	0	0	1	1
..........................................................ACCCTATAGATCCGAATTTGTT.................................................................................................	22	1	1	164.00	164	139	3	9	11	0	2
..................................................................................................CAAATTCGGTTCTAGAGTGGTTT........................................................	23	1	1	156.00	156	147	0	1	5	2	1
..........................................................ACCCTGTAGGTCCGAATTTGTT.................................................................................................	22	1	1	149.00	149	108	5	16	16	3	1
..........................................................ACATTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	146.00	146	146	0	0	0	0	0
..........................................................ACCCTGTAAATCCGAATTTGTT.................................................................................................	22	1	1	145.00	145	128	3	9	5	0	0
..........................................................ACCCGGTAGATCCGAATTTGTT.................................................................................................	22	1	1	145.00	145	141	1	1	1	1	0
..........................................................ACCCTTTAGATCCGAATTTGTC.................................................................................................	22	2	1	140.00	140	140	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTCC...............................................................................................	24	2	1	139.00	139	20	42	70	2	2	3
..................................................................................................CAAATTCGGTCCTAGAGAGGTTT........................................................	23	1	1	139.00	139	111	14	7	3	4	0
..........................................................ACCCTGTAGATCCGAATTCGTT.................................................................................................	22	1	1	137.00	137	113	1	5	14	4	0
..........................................................ACCCAGTAGATCCGAATTTGTT.................................................................................................	22	1	1	137.00	137	128	2	0	3	3	1
..........................................................ACCCTGTAGATCCGAAGTTGTT.................................................................................................	22	1	1	135.00	135	128	0	0	4	0	3
..........................................................ACCCTGTAGATCCGAATGTGTT.................................................................................................	22	1	1	134.00	134	122	0	0	7	4	1
...................................................................................................AAATTCGGTTCTAGAGAGGTTTT.......................................................	23	1	1	134.00	134	46	73	14	0	0	1
..........................................................ACCCTGTAGATCCGATTTTGTC.................................................................................................	22	2	1	134.00	134	134	0	0	0	0	0
..........................................................ACACTGTAGATCCGAATTTGTTC................................................................................................	23	2	1	131.00	131	130	0	0	0	0	1
..................................................................................................CAAATTCGGTTCTGGAGAGGTTT........................................................	23	1	1	131.00	131	66	41	14	0	7	3
..................................................................................................CAAACTCGGTTCTAGAGAGGTTT........................................................	23	1	1	130.00	130	118	4	4	4	0	0
..................................................................................................CAAAATCGGTTCTAGAGAGGTTT........................................................	23	1	1	127.00	127	121	2	0	3	1	0
......................................................................................................TTCGGTTCTAGAGAGGTTT........................................................	19	0	1	126.00	126	66	58	1	1	0	0
..........................................................ACACTGTAGATACGAATTTGTT.................................................................................................	22	2	1	126.00	126	125	0	0	1	0	0
..................................................................................................CAATTTCGGTTCTAGAGAGGTTTT.......................................................	24	2	1	126.00	126	125	0	1	0	0	0
..........................................................ACCCTGTAGATCCGACTTTGTT.................................................................................................	22	1	1	126.00	126	20	0	14	61	12	19
..................................................................................................CAACTTCGGTTCTAGAGAGGTTT........................................................	23	1	1	126.00	126	8	2	101	3	3	9
..........................................................ACACTGTAGATCAGAATTTGTT.................................................................................................	22	2	1	123.00	123	119	0	0	4	0	0
.................................................................................................ACAAATTCGGTTCTAGAGAGGTTT........................................................	24	0	1	123.00	123	50	68	3	2	0	0
..................................................................................................CTAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	123.00	123	120	0	2	0	1	0
..........................................................ACCCTGTAGATCCGAATTTGAC.................................................................................................	22	2	1	120.00	120	119	0	0	1	0	0
.....................................................................................................ATTCGGTTCTAGAGAGGTTT........................................................	20	0	1	117.00	117	59	54	1	2	1	0
..........................................................ACCCTGTAGATCCGAATTTATT.................................................................................................	22	1	1	116.00	116	93	0	4	17	0	2
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT......................................................	25	1	1	116.00	116	46	18	33	9	8	2
..........................................................ACCCTGTAGTTCCGAATTTGTT.................................................................................................	22	1	1	115.00	115	100	1	2	10	1	1
..........................................................ACCTTGGAGATCCGAATTTGTT.................................................................................................	22	2	1	112.00	112	111	0	0	1	0	0
..........................................................ACCCTGTCGATCCGAAGTTGTT.................................................................................................	22	2	1	112.00	112	112	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTCT........................................................	23	1	1	111.00	111	94	8	6	0	2	1
..........................................................ACCCTGTAGATCCGAATCTGTT.................................................................................................	22	1	1	110.00	110	93	3	5	8	0	1
..................................................................................................CAAATTCGGTTCTAGAGACGTTT........................................................	23	1	1	110.00	110	93	8	8	0	1	0
..........................................................ACCCTGTAGATCCGTATTTGTT.................................................................................................	22	1	1	108.00	108	39	1	2	62	3	1
..................................................................................................CAAATTCGGTTCTAGAAAGGTTT........................................................	23	1	1	106.00	106	91	5	4	2	3	1
..........................................................ACCCTGTAGATCCGAATTT....................................................................................................	19	0	1	106.00	106	63	36	0	0	2	5
.......................................................................................................TCGGTTCTAGAGAGGTTT........................................................	18	0	1	103.00	103	63	40	0	0	0	0
........................................................TCACCCTGTAGATCCGAATTTGTT.................................................................................................	24	2	1	102.00	102	102	0	0	0	0	0
...................................................................................................CAATTCGGTTCTAGAGAGGTTT........................................................	22	1	1	101.00	101	66	12	21	0	1	1
..........................................................AACCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	99.00	99	35	4	3	51	4	2
..................................................................................................CAAATTGGGTTCTAGAGAGGTTT........................................................	23	1	1	99.00	99	91	3	3	1	1	0
..................................................................................................CAAATTCGGTTCTAAAGAGGTTT........................................................	23	1	1	99.00	99	89	7	2	1	0	0
..................................................................................................TAAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	97.00	97	92	1	1	0	3	0
..................................................................................................CAAATTCGGTTCCAGAGAGGTTT........................................................	23	1	1	97.00	97	76	11	4	3	2	1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.......................................................	24	1	1	97.00	97	19	64	6	1	6	1
.........................................................TACTCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	97.00	97	97	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAAATTGTT.................................................................................................	22	1	1	95.00	95	78	1	16	0	0	0
..........................................................ACACTGTAGATCCGAATTTGC..................................................................................................	21	2	1	95.00	95	95	0	0	0	0	0
..........................................................ATCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	94.00	94	93	0	0	1	0	0
..................................................................................................CAAATCCGGTTCTAGAGAGGTTT........................................................	23	1	1	94.00	94	87	2	3	0	2	0
..........................................................ACCCTGTAGATCCGAGTTTGTT.................................................................................................	22	1	1	94.00	94	57	5	9	19	2	2
..........................................................AGCCTGTAGATCCGAATTTGTTC................................................................................................	23	2	1	94.00	94	93	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGT.........................................................	22	1	1	93.00	93	88	2	2	0	1	0
..........................................................ACCCTGTAGATCCGAATTTGGC.................................................................................................	22	2	1	93.00	93	93	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTA........................................................	23	1	1	93.00	93	34	38	18	0	2	1
..........................................................AGCCTGTAGATCCGAATTTGC..................................................................................................	21	2	1	93.00	93	93	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGACAGGTTT........................................................	23	1	1	88.00	88	78	7	0	1	2	0
..........................................................AGACTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	88.00	88	88	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTACAGAGGTTT........................................................	23	1	1	87.00	87	66	11	1	4	4	1
..........................................................ACCTTGTCGATCCGAATTTGTT.................................................................................................	22	2	1	85.00	85	85	0	0	0	0	0
..................................................................................................CAAATTCGATTCTAGAGAGGTTT........................................................	23	1	1	85.00	85	71	5	6	0	2	1
..................................................................................................CAGATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	85.00	85	54	21	8	0	2	0
..........................................................ACCTTGTAGATCCGAATTTTTT.................................................................................................	22	2	1	85.00	85	85	0	0	0	0	0
..................................................................................................CAAAGTCGGTTCTAGAGAGGTTT........................................................	23	1	1	85.00	85	80	0	0	1	3	1
..........................................................ACTCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	84.00	84	81	0	2	0	1	0
..........................................................ACCCTGTAGATCAGAATTTGTC.................................................................................................	22	2	1	84.00	84	84	0	0	0	0	0
..................................................................................................CTAATTCGGTTCTAGAGAGGTTC........................................................	23	2	1	83.00	83	83	0	0	0	0	0
..........................................................ACCCTGTAGATACGCATTTGTT.................................................................................................	22	2	1	82.00	82	80	0	0	2	0	0
..........................................................AGCCTGTAGATCCGAATTTTTT.................................................................................................	22	2	1	81.00	81	81	0	0	0	0	0
..................................................................................................CTATTTCGGTTCTAGAGAGGTTT........................................................	23	2	1	80.00	80	80	0	0	0	0	0
..........................................................ACGCTGTAGATCCGAATTTGTC.................................................................................................	22	2	1	79.00	79	79	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAACTTGTT.................................................................................................	22	1	1	78.00	78	50	3	5	16	3	1
..........................................................ACCCTGTAGATCCGAATTGTT..................................................................................................	21	2	1	78.00	78	64	4	9	1	0	0
..........................................................ACCCTGTAGCTCCGAATTTGTT.................................................................................................	22	1	1	78.00	78	25	0	3	44	4	2
..........................................................ACACTGTAGATCCGAATTTTTT.................................................................................................	22	2	1	78.00	78	78	0	0	0	0	0
..........................................................ACCTTGTAGATCCGAATTTGC..................................................................................................	21	2	1	77.00	77	77	0	0	0	0	0
...........................................................CCCTGTAGATCCGAATTTGTTC................................................................................................	22	1	1	77.00	77	1	76	0	0	0	0
..........................................................TGCCTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	75.00	75	75	0	0	0	0	0
..................................................................................................CGAATTCGGTTCTAGAGAGGGTT........................................................	23	2	1	75.00	75	74	0	0	0	0	1
..........................................................ACCTTGTAGATCCGAATTTGTTC................................................................................................	23	2	1	75.00	75	75	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAAGTTT........................................................	23	1	1	74.00	74	50	8	7	5	2	2
..................................................................................................CAAATTCGGTTCTAGAGA.............................................................	18	0	1	74.00	74	12	46	2	3	5	6
..........................................................AGCCTGTAGATCAGAATTTGTT.................................................................................................	22	2	1	73.00	73	73	0	0	0	0	0
.........................................................CACCCTGTAGATCCGAATTTGTC.................................................................................................	23	2	1	73.00	73	71	2	0	0	0	0
.........................................................TAACCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	70.00	70	70	0	0	0	0	0
.........................................................TGCCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	69.00	69	69	0	0	0	0	0
...................................................................................................AGATTCGGTTCTAGAGAGGTTT........................................................	22	1	1	69.00	69	67	2	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTA.........................................................	22	1	1	69.00	69	9	29	25	0	4	2
..........................................................ACCCTGTAGATCCGAATTTGTTCA...............................................................................................	24	2	1	68.00	68	3	26	37	1	1	0
...........................................................CCCTGTAGATCCGAATTTGTTT................................................................................................	22	1	1	68.00	68	2	66	0	0	0	0
......................................................GATCACCCTGTAGATCCGAATTTGTT.................................................................................................	26	3	1	68.00	68	68	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTTTC.................................................................................................	22	2	1	68.00	68	68	0	0	0	0	0
.................................................................................................TCAAATTCGGTTCTAGAGAGGTTT........................................................	24	1	1	67.00	67	3	64	0	0	0	0
..................................................................................................CAAATTCTGTTCTAGAGAGGTT.........................................................	22	1	1	66.00	66	58	4	4	0	0	0
..........................................................ACCCTGTAGATCAGAATTTGGT.................................................................................................	22	2	1	65.00	65	65	0	0	0	0	0
..................................................................................................CAAGTTCGGTTCTAGAGAGGTTT........................................................	23	1	1	64.00	64	42	13	4	1	2	2
..................................................................................................CGAATTCGGTTCTAGAGAGGT..........................................................	21	1	1	64.00	64	62	0	2	0	0	0
..........................................................ACCCTGTAGATCCGAATTATTT.................................................................................................	22	2	1	64.00	64	60	0	4	0	0	0
..........................................................ACCCTGTAGATCCGAATTAGTT.................................................................................................	22	1	1	64.00	64	56	0	3	5	0	0
..........................................................ACCCTGTAGATCAGAATTTGT..................................................................................................	21	1	1	63.00	63	61	0	0	0	2	0
...................................................................................................AAATTCGGTTCTAGAGAGGTTTA.......................................................	23	0	1	63.00	63	29	30	3	0	1	0
..........................................................ACCCTGTAGATCCGAATTTGTTTT...............................................................................................	24	1	1	62.00	62	46	7	5	4	0	0
..................................................................................................AAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	62.00	62	32	11	13	4	2	0
..................................................................................................CAAATTCGGTACTAGAGAGGTTT........................................................	23	1	1	62.00	62	51	8	2	0	1	0
..................................................................................................CAAATTCGGTTCTATAGAGGTTT........................................................	23	1	1	62.00	62	22	16	14	4	4	2
..........................................................ACCCTGTAGATCCGAATTTGTTG................................................................................................	23	0	1	62.00	62	43	15	3	1	0	0
..........................................................ACCCTGTACATCCGAATTTGTC.................................................................................................	22	2	1	61.00	61	61	0	0	0	0	0
..........................................................ACCCTGAAGATCCGAATTTGTT.................................................................................................	22	1	1	61.00	61	49	3	4	5	0	0
..........................................................TCCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	61.00	61	60	0	1	0	0	0
..........................................................ACACTGTAGATCCGCATTTGTT.................................................................................................	22	2	1	60.00	60	58	0	0	1	1	0
..........................................................ACCTTGTAGATCAGAATTTGTT.................................................................................................	22	2	1	60.00	60	60	0	0	0	0	0
..........................................................ATCCTGTAGATCCGAATTTGTTT................................................................................................	23	2	1	59.00	59	58	0	1	0	0	0
..........................................................ACCCTTTAGATCCGAATTTGT..................................................................................................	21	1	1	58.00	58	56	0	1	0	0	1
..........................................................AGCCTGTCGATCCGAATTTGTT.................................................................................................	22	2	1	58.00	58	58	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATT.....................................................................................................	18	0	1	57.00	57	39	18	0	0	0	0
..................................................................................................CAATTTCGGTTCTAGAGAGGGTT........................................................	23	2	1	57.00	57	57	0	0	0	0	0
..........................................................ACCCTGTTGATCCGAATTTGTT.................................................................................................	22	1	1	56.00	56	41	2	5	6	0	2
..........................................................ACCATGTAGATCCGAATTTGTT.................................................................................................	22	1	1	55.00	55	14	2	21	14	3	1
..................................................................................................TAAATTCGGTTCTAGAGAGGTTC........................................................	23	2	1	55.00	55	55	0	0	0	0	0
..........................................................AGCCTTTAGATCCGAATTTGTT.................................................................................................	22	2	1	54.00	54	54	0	0	0	0	0
.......................................................ATCACCCTGTAGATCCGAATTTGTT.................................................................................................	25	3	1	54.00	54	53	1	0	0	0	0
..................................................................................................GAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	54.00	54	37	13	3	0	1	0
..........................................................ACCCTGGAGATCCGAATTTGTC.................................................................................................	22	2	1	53.00	53	53	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATATGTT.................................................................................................	22	1	1	53.00	53	52	0	0	1	0	0
..........................................................ACCCTGTAGATACGAATTTGTC.................................................................................................	22	2	1	53.00	53	53	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTTT.......................................................	24	2	1	53.00	53	47	3	2	1	0	0
..................................................................................................CAAATTCGGTTCTAGAGCGGTTT........................................................	23	1	1	53.00	53	24	3	1	13	6	6
..........................................................ACCCTGTAGATCCGCATTTGT..................................................................................................	21	1	1	51.00	51	33	0	0	5	0	13
..........................................................ACACTGTACATCCGAATTTGTT.................................................................................................	22	2	1	48.00	48	48	0	0	0	0	0
..........................................................ACCCTGTCGATCCGAATTTGGT.................................................................................................	22	2	1	48.00	48	48	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTTGAGAGGTTT........................................................	23	1	1	48.00	48	37	6	4	1	0	0
..................................................................................................CAAATTCGGTTCTAGATAGGGTT........................................................	23	2	1	47.00	47	47	0	0	0	0	0
..................................................................................................CAAATTCGGCTCTAGAGAGGTT.........................................................	22	1	1	47.00	47	25	6	4	0	8	4
..........................................................AGCCTGTAGATCCGAATTTGGT.................................................................................................	22	2	1	46.00	46	46	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTAT........................................................	23	1	1	46.00	46	43	1	2	0	0	0
..........................................................ACCCTGTCGATCCGAATTTGT..................................................................................................	21	1	1	46.00	46	45	0	0	0	0	1
.............................................................CTGTAGATCCGAATTTGTT.................................................................................................	19	0	1	45.00	45	13	16	7	6	0	3
..........................................................ACCCTCTAGATCCGAATTTGTT.................................................................................................	22	1	1	45.00	45	34	3	1	6	1	0
..........................................................ACCCTGTATATCCGAATTTGTC.................................................................................................	22	2	1	45.00	45	45	0	0	0	0	0
..................................................................................................CAAATACGGTTCTAGAGAGGTTT........................................................	23	1	1	44.00	44	41	2	1	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGAT.................................................................................................	22	1	1	44.00	44	27	5	2	9	1	0
..................................................................................................CAATTTCGGTTCTAGAGATGTTT........................................................	23	2	1	44.00	44	44	0	0	0	0	0
..................................................................................................CAAATTCGTTTCTAGAGAGGTT.........................................................	22	1	1	44.00	44	36	4	3	1	0	0
..........................................................ATCTTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	44.00	44	44	0	0	0	0	0
..........................................................CCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	43.00	43	29	0	2	9	2	1
.........................................................CAACCTGTAGATCCGAATTTGTT.................................................................................................	23	2	1	42.00	42	42	0	0	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGTTC........................................................	22	1	1	42.00	42	40	2	0	0	0	0
.........................................................CACTCTGTAGATCCGAATTTGTT.................................................................................................	23	2	1	42.00	42	42	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGATTT........................................................	23	1	1	41.00	41	35	0	2	3	1	0
..........................................................ACCCTGTAGATACGAATTTGT..................................................................................................	21	1	1	41.00	41	34	6	0	0	1	0
..................................................................................................CAAATTCGGGTCTAGAGAGGTT.........................................................	22	1	1	41.00	41	33	1	1	1	3	2
..........................................................ACCTTGTACATCCGAATTTGTT.................................................................................................	22	2	1	41.00	41	41	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTC........................................................	23	2	1	40.00	40	40	0	0	0	0	0
..................................................................................................CAATTTCGGTTCTAGAGAGGT..........................................................	21	1	1	40.00	40	39	0	1	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTAA...............................................................................................	24	2	1	40.00	40	15	13	11	1	0	0
.........................................................TACCCTGTAGATCCGAATTTG...................................................................................................	21	0	1	40.00	40	21	13	1	2	2	1
..................................................................................................CACATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	40.00	40	39	0	1	0	0	0
..........................................................ACCCTGTAGATCCCAATTTGTT.................................................................................................	22	1	1	40.00	40	28	4	2	5	1	0
..................................................................................................CAAATTCGTTTCTAGAGAGGTTC........................................................	23	2	1	39.00	39	39	0	0	0	0	0
..........................................................AGCTTGTAGATCCGAATTTGTC.................................................................................................	22	3	1	39.00	39	39	0	0	0	0	0
..........................................................AGCCTGTAGATCCGATTTTGTT.................................................................................................	22	2	1	38.00	38	38	0	0	0	0	0
..........................................................ACCCTGTAGATCCGATTTTGT..................................................................................................	21	1	1	38.00	38	36	0	0	0	2	0
..................................................................................................CAAATTCGGTTGTAGAGAGGTT.........................................................	22	1	1	38.00	38	1	37	0	0	0	0
..................................................................................................CAATTTCGTTTCTAGAGAGGTTT........................................................	23	2	1	38.00	38	38	0	0	0	0	0
..........................................................ACTCTGTAGATCCGAATTTGTTT................................................................................................	23	2	1	38.00	38	38	0	0	0	0	0
..........................................................ACCCTGGAGATCCGATTTTGTT.................................................................................................	22	2	1	37.00	37	36	0	0	1	0	0
..........................................................ACCCTGTAGATCCGAATTTGG..................................................................................................	21	1	1	37.00	37	36	0	0	1	0	0
.........................................................CACCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	37.00	37	37	0	0	0	0	0
...........................................................CCCTGTAGATCCGAATTTGTC.................................................................................................	21	1	1	37.00	37	24	13	0	0	0	0
..........................................................ACCCTGTAGATCGGAATTTGTT.................................................................................................	22	1	1	36.00	36	28	3	3	2	0	0
..................................................................................................CAAATTCGGTTCTAGTGAGGTT.........................................................	22	1	1	36.00	36	34	0	1	1	0	0
....................................................................................................AATTCGGTTCTAGAGAGGTT.........................................................	20	0	1	36.00	36	12	23	1	0	0	0
..........................................................ACCCTGGAGATCCGAATTTGT..................................................................................................	21	1	1	36.00	36	29	0	0	0	5	2
.................................................................................................GCAAATTCGGTTCTAGAGAGGTTT........................................................	24	1	1	36.00	36	1	35	0	0	0	0
.........................................................TACCCTGTAGATCCGAATTTGTC.................................................................................................	23	1	1	36.00	36	29	4	3	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGTTTTT.......................................................	24	2	1	35.00	35	33	0	1	1	0	0
..................................................................................................CAATTTCTGTTCTAGAGAGGTTT........................................................	23	2	1	35.00	35	35	0	0	0	0	0

ATGTAATTATACGTATATTTATACTTACGTACAGATTCAAGGTGAGACAAGGTGCAGATGGGACATCTAGGCTTAAACAACATGGTATCGAAATTCCTGTTTAAGCCAAGATCTCTCCAAATACACCGAGTAACAGGTCGCTTAGCTTACACTTAGCACTCACAAGCCACGAGATAT ***************************************...((..((((((..(((((.((((.(((((((((((................))))))))))).)))).)).)))..))))))..)).....*****************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M060 embryo	V056 head	V049 head	V110 male body	M046 female body
.........................................................TTTGGAGATCTAGGCTTAAAC...................................................................................................	21	3	1	1.00	1	1	0	0	0	0
................................................................................................CTGTTTAAGCCTAGATCTC..............................................................	19	1	2	0.50	1	1	0	0	0	0
................................................................................................CTGTTTAAGCCTAGATGTCTCT...........................................................	22	3	2	0.50	1	1	0	0	0	0
.........................................................GTGAGAGATCTAGGCTTAAAC...................................................................................................	21	3	4	0.25	1	0	1	0	0	0
.........................................................CTGAGACATCTTGGCTTAAAC...................................................................................................	21	3	4	0.25	1	0	0	1	0	0
..........................................................TTGGAGATCTTGGCTTAAAC...................................................................................................	20	3	20	0.20	4	3	0	0	1	0
.........................................................TTTGGATATCTAGGCTTAAAC...................................................................................................	21	3	6	0.17	1	1	0	0	0	0
..........................................................TGGAAGATCTTGGCTTAAAC...................................................................................................	20	3	6	0.17	1	1	0	0	0	0
..........................................................TTGGAGATCTCGGCTTAAAC...................................................................................................	20	3	8	0.13	1	0	0	0	1	0
..........................................................TGACACATCTTGGCTTAAAC...................................................................................................	20	3	11	0.09	1	0	1	0	0	0
................................................................................................TTGTTTAAGCCTAGATCCCT.............................................................	20	3	12	0.08	1	1	0	0	0	0
..............................................................................................TCATGGTTAAGCCAAGACC................................................................	19	3	12	0.08	1	0	0	0	0	1

Species	Coordinate	ID	Type	Alignment
droMoj3	scaffold_6540:16502862-16503038 +	dmo-mir-10	Known_mirbase	TACATTA-ATATGCATATAAATAT-------------------------------GAATGCATGTCT-AAGT------------------------------------------------------------------------------------------------T------CCACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA------TCGAATGTGAA---------------------TCGTGAGTGTTCGGTGCTCTATA
droVir3	scaffold_13047:6092028-6092193 +	dvi-mir-10	Known_mirbase	TGT---------GTGTATTGCCA----------------------------------------------------------C-GC-------------------GTC-----------T---------------------------------------------AGGTT------TCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAA---------TATGTGAATAAGTGAAC---AT--GTGAATAGTGAAT----ATG------TG
droGri2	scaffold_14906:11443510-11443682 +	dgr-mir-10	Known_mirbase	TATAT-ATATATATATATATACATAT--------------------------------------------------------------------------------------------------------------------------AGTTTATATATACTGT---TT------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA------TGAGT----------AAAG---AATAGTGAATAGTGAAT---------------
droWil2	scf2_1100000004902:12007319-12007425 -	dwi-mir-10	Known_mirbase	TAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAA-------------------------------------------------------------
dp5	2:19739380-19739593 +	dps-mir-10	Known_mirbase	T-------------TTATTAATATTTTCACTT-T---TTTTT-CCAGTC----CTGATTGCTCACCTC-------------------TCGGCGCCCTCGGGCA-TGG--------CACCGG--GCTCCACACCCCGTCCTCTGCAGGCAGTTTTTTT----GGTTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAA-------------------------------------------------------------
droPer2	scaffold_3:2487575-2487786 +	dpe-mir-10	Known_mirbase	T-------------TTATTAATATTTTCACTT-T-----TTTTCCAGTC-----CGATTGCTCACCTC-------------------TCGGCGCCCTCGGGCT-TGG--------CACCGG--GCTCCACACCCCGTTCTCTGCAGGCAGTTTTTTT----GGTTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAA-------------------------------------------------------------
droAna3	scaffold_13340:5417315-5417458 +	dan-mir-10	Known_mirbase	C-----------------------------------------------------------------------------CGCC-TCACCCAACACCGTCACACCTTGC--------GGCTGT--GC--------------------------------------TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCG---------------------------------------------------------------
droBip1	scf7180000396708:3396386-3396584 -			TAT---------------------TTTAACCTTT---TTTTT-GCAGCCCACCGTGATTGCCTGCCTT-----------GC------CCGACACCGTCACACCTTGC--------AACTGT------------------------------------------TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTA---------AAAG--AA--------------GAGTGTTT-----------TGT------TA
droKik1	scf7180000302639:2316899-2317027 +			T-----------------------------------------------------------------------TCATTATCCC-GC-------------------AGC--------GGCTGT------------------------------------------TCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACG---------------------------------------------------------------
droFic1	scf7180000453835:71964-72111 -			TGAGTCA-CTGC-----------------------------------------------------------GTCATTTCAAC-CC-------------------GGC--------GACTGC------------------------------------------TCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAA-------------------------------------------------------------
droEle1	scf7180000491278:1424383-1424572 -			CACATGGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----GTGATTGCTCACCT-CAGTTCATTTCGCC-GC-------------------TGC--------GACTGC------------------------------------------TCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAA-------------------------------------------------------------
droRho1	scf7180000777432:2222-2360 +			TCC-------------------------------------------------------------------GTTCATTTCACC-CA-------------------TGCGACG---CGACTGT------------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGA--------------------------------------------------------------
droBia1	scf7180000302155:2026032-2026220 +			CACATTGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----GTGATTGCGCGCCCTGAGCTCCCTTCGCC-CC-------------------TGC--------GACTGC------------------------------------------TCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCG---------------------------------------------------------------
droTak1	scf7180000415671:411349-411575 +			CACATTGTATATGTTTATTAACATTTTCACTT-T---TTTTT-GCAGCC----GTGATTGCCCACCCTGAGTTCACTTCGCC-CC-------------------TGC--------GACTGC------------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATAAAACATTTAAAGTGAA--------ACTGAA--ATG--AAGTGAA---------------A
droEug1	scf7180000409886:257245-257452 +			CACATTGTATATGTTTATTAACAATTTCACTT-T-----TTT-GCAGCA----GTGATTGCTCACCT-GAGCTCATTCAGCCGCC-------------------TGC--------GACTGTTAGG--------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATAG----CCGAATACGGA--------------------------------------------
dm3	chr3R:2635212-2635406 -	dme-mir-10	Known_mirbase	CACATTGTATATGTTTATTAACATTTTCACTT-TTTTTTTTT-GCAGCC----GCGATTGCCTAGCG-GACTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------
droSim2	3r:2529820-2530011 -	dsi-mir-10	Known_mirbase	CACATTGTATATGTTTATTAACATTTTCACTT-T---TTTTT-GCAGCC----GCGATTGCCCAGCG-GAGTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------
droSec2	scaffold_6:2726433-2726625 -	dse-mir-10	Known_mirbase	CACATTGTATATGTTTATTAATATTTTCACTTTT---TTTTT-GCAGCC----GCGATTGCCCAGCG-GAGTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------
droYak3	3R:7777901-7778105 +	dya-mir-10	Known_mirbase	CACATTGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----ACGATTGCCCAGCG-AAGTTCATTTCGCC-CC-------------------TGCGACGAACTGA-CGT------------------------------------------TCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGA---------AAAGTGAA--------------------------------------------
droEre2	scaffold_4770:2882546-2882686 -	der-mir-10	Known_mirbase	CA--------------------------------------------------------------------GTTCATTTCGCC-CC-------------------TCC--------GAC-GT------------------------------------------TCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGA---------AAAGTGAA--------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

TACATTA-ATATGCATATAAATAT-------------------------------GAATGCATGTCT-AAGT------------------------------------------------------------------------------------------------T------CCACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA------TCGAATGTGAA---------------------TCGTGAGTGTTCGGTGCTCTATA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	438052.00	438052	28798	14157	705	1280	370003	23109
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	323963.00	323963	70958	2759	975	1932	230117	17222
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	32440.00	32440	107	11	1	8	32127	186
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	25263.00	25263	6731	213	220	433	14784	2882
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	18452.00	18452	2799	342	227	407	12962	1715
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	9935.00	9935	33	6	2	4	9869	21
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	9328.00	9328	3982	41	193	377	1370	3365
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	8847.00	8847	769	309	22	45	7073	629
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	6883.00	6883	5710	22	5	10	1018	118
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	5866.00	5866	2579	31	131	358	178	2589
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	5425.00	5425	930	175	56	90	3217	957
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	4179.00	4179	964	21	18	19	2524	633
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	2843.00	2843	2637	9	0	1	194	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	2280.00	2280	3	0	0	2	2272	3
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	1906.00	1906	87	50	7	10	1707	45
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	784.00	784	20	0	1	2	725	36
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	692.00	692	371	10	20	36	124	131
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	625.00	625	534	0	3	3	54	31
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	574.00	574	82	8	2	4	448	30
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	474.00	474	147	2	4	5	212	104
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	471.00	471	305	0	0	0	159	7
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	420.00	420	120	6	3	6	242	43
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	403.00	403	10	2	0	0	382	9
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGC..............................................................................................................................	22	1	335.00	335	0	0	0	0	335	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	327.00	327	309	0	1	4	4	9
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	325.00	325	164	2	11	18	7	123
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC...........................................................................................................................	24	1	244.00	244	105	0	1	1	73	64
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	237.00	237	213	0	1	1	1	21
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	220.00	220	214	0	0	0	6	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	215.00	215	9	1	1	1	196	7
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	206.00	206	7	0	0	0	197	2
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	199.00	199	107	2	0	0	83	7
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	186.00	186	38	7	0	1	135	5
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	175.00	175	3	0	0	0	170	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC...........................................................................................................................	24	1	139.00	139	42	2	3	2	20	70
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	134.00	134	73	0	1	0	46	14
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	126.00	126	58	1	0	0	66	1
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	123.00	123	68	2	0	0	50	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGAC.............................................................................................................................	22	1	120.00	120	0	1	0	0	119	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	117.00	117	54	2	0	1	59	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	106.00	106	36	0	5	2	63	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	103.00	103	40	0	0	0	63	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	97.00	97	64	1	1	6	19	6
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGGC.............................................................................................................................	22	1	93.00	93	0	0	0	0	93	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	93.00	93	38	0	1	2	34	18
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTC............................................................................................................................	22	1	77.00	77	76	0	0	0	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	74.00	74	46	3	6	5	12	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	69.00	69	29	0	2	4	9	25
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA...........................................................................................................................	24	1	68.00	68	26	1	0	1	3	37
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	68.00	68	66	0	0	0	2	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	63.00	63	30	0	0	1	29	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	62.00	62	15	1	0	0	43	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	57.00	57	18	0	0	0	39	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	45.00	45	16	6	3	0	13	7
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTC...................................................................................	22	1	42.00	42	2	0	0	0	40	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	40.00	40	13	1	0	0	15	11
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	40.00	40	13	2	1	2	21	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	37.00	37	0	1	0	0	36	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTC.............................................................................................................................	21	1	37.00	37	13	0	0	0	24	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	36.00	36	23	0	0	0	12	1
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTC.............................................................................................................................	23	1	36.00	36	4	0	0	0	29	3

droVir3

TGT---------GTGTATTGCCA----------------------------------------------------------C-GC-------------------GTC-----------T---------------------------------------------AGGTT------TCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAA---------TATGTGAATAAGTGAAC---AT--GTGAATAGTGAAT----ATG------TG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	419015.00	419015	8254	1181	7736	40960	49	532	209	215	306	2454	160	1	8	57	2180	1254	603	1349	1463	936	36	2209	2955	514	46	54	337	145	432	1320	273	534	20	725	82	87	153	65	49	5135	450	1036	1240	7044	5291	11494	9019	8658	16437	10498	19304	18134	11558	15829	12594	10011	7613	13524	87841	8469	563	20604	17	119	243	634	660	2310	613	1675	1456	763	690	609	1459	9274	7485	4593	4126
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	110936.00	110936	2610	1710	18365	22232	23	355	61	9	18	160	1	0	0	3	4031	2003	916	2791	1941	2009	29	2242	5779	345	64	52	386	196	441	1673	271	632	29	716	49	112	174	75	37	3991	15	51	46	159	137	327	267	292	591	349	695	504	313	439	342	364	283	445	2907	2206	1418	20758	10	165	146	49	53	91	39	179	81	73	45	40	49	123	111	96	147
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	37649.00	37649	3460	957	897	1641	2	44	23	15	22	175	7	1	0	1	461	253	140	328	505	250	4	611	587	48	2	10	36	9	55	130	32	56	1	91	1	2	6	2	11	466	58	122	130	139	105	305	266	304	643	565	1000	976	634	1061	744	1365	1032	2945	7448	209	163	2182	0	1	23	42	56	71	109	964	272	194	147	95	53	582	448	430	424
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	21220.00	21220	1809	1398	3909	2374	4	44	8	1	2	28	1	0	1	1	430	262	100	241	236	150	5	189	429	75	11	7	57	19	50	173	26	72	2	62	1	1	3	5	4	478	4	16	12	46	40	56	45	54	98	40	114	90	69	79	61	167	150	276	646	184	383	5540	0	15	25	15	11	12	7	78	22	17	8	6	16	31	27	31	61
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	16889.00	16889	85	6	66	1417	0	32	23	0	0	6	0	0	0	0	10	19	2	1	5	14	3	16	29	14	2	3	3	3	22	69	13	16	0	19	0	0	0	0	6	148	7	23	18	81	52	333	207	195	319	494	1000	1053	740	859	684	460	370	699	6056	83	0	103	0	9	2	22	21	25	60	35	217	68	70	49	9	162	132	73	47
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	16683.00	16683	400	189	4653	813	10	60	24	7	4	65	0	0	0	1	294	129	108	169	147	110	3	122	214	172	12	11	64	34	63	161	48	94	1	105	1	0	1	4	3	801	1	3	2	2	4	5	8	9	21	16	22	23	10	22	14	133	121	172	153	137	368	5873	0	19	20	22	8	4	28	95	61	37	35	16	4	18	23	32	45
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	15205.00	15205	140	62	7074	238	6	35	15	9	6	48	0	0	1	0	0	2	2	1	2	2	8	0	33	61	5	3	22	11	31	49	17	38	0	39	1	0	4	1	5	365	0	2	0	2	1	1	1	0	1	0	1	3	2	2	0	11	6	6	10	117	317	5963	0	5	25	41	31	15	18	30	16	13	17	10	16	33	29	56	68
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	9659.00	9659	172	17	242	828	1	21	7	3	12	61	3	0	0	1	70	36	17	26	38	31	3	73	115	12	2	1	9	3	17	29	11	15	0	14	0	0	6	3	2	123	11	20	33	156	104	201	181	141	320	230	374	388	254	305	285	324	269	387	1747	208	9	511	0	4	12	22	21	47	10	26	29	23	11	13	28	317	305	160	149
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	3885.00	3885	82	12	6	3307	0	5	2	0	0	4	1	0	0	0	1	2	1	0	2	1	0	5	5	2	0	0	1	0	4	4	0	1	0	10	0	0	0	1	1	33	0	1	0	1	4	4	6	5	3	7	8	15	9	16	9	26	18	47	107	14	2	30	0	3	0	1	1	6	2	5	17	5	5	5	2	3	3	1	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	3157.00	3157	31	14	341	314	3	12	3	1	1	13	0	0	0	1	106	54	31	82	37	62	1	55	143	5	0	1	15	3	7	35	14	21	2	31	1	4	5	1	0	139	0	0	0	0	2	5	4	4	7	6	12	5	6	8	8	6	7	11	36	141	50	1218	0	2	2	1	2	1	0	5	2	0	0	2	1	3	3	5	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	2657.00	2657	801	353	339	16	0	6	1	0	0	5	0	0	0	0	30	26	18	28	39	31	1	53	37	4	0	0	3	0	3	9	4	4	0	10	0	0	0	0	0	25	0	1	2	1	5	1	4	3	2	6	8	7	5	11	4	19	17	32	89	1	38	197	0	3	0	1	0	2	16	205	44	33	25	11	1	7	4	3	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	2328.00	2328	71	12	19	20	1	0	3	0	0	0	0	0	1	0	6	0	0	3	1	7	0	4	9	2	2	0	3	0	1	2	1	0	0	2	0	1	3	4	1	11	2	7	8	45	37	90	81	72	134	113	210	129	83	109	92	36	28	69	395	5	0	32	0	0	4	11	8	11	53	32	30	36	36	18	9	42	31	17	23
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	2030.00	2030	2	5	1550	81	0	3	0	0	1	0	0	0	0	0	14	12	4	17	6	8	0	12	45	5	0	0	5	2	4	15	2	4	2	4	0	0	1	0	0	20	0	0	0	0	1	1	1	1	1	2	1	3	0	2	2	0	0	0	6	21	5	150	0	5	1	0	1	0	0	1	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGA..........................................................................................................	40	1	1784.00	1784	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	138	111	93	59	111	199	37	72	66	43	54	66	27	20	17	663	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGG...........................................................................................................	39	1	1512.00	1512	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	118	80	119	86	69	175	64	110	94	58	63	54	10	4	4	402	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................CACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	1405.00	1405	10	4	24	96	0	0	0	0	0	0	1	0	0	0	3	2	0	1	1	0	0	1	4	2	0	0	0	0	0	3	0	3	0	0	0	0	0	0	0	1	1	4	4	22	23	53	44	27	95	49	74	73	56	65	52	14	20	32	290	15	1	22	0	0	0	6	2	4	1	5	0	0	0	2	5	78	64	22	24
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	1302.00	1302	28	19	1	993	0	2	1	0	0	0	0	0	0	0	2	0	0	4	0	0	1	1	2	1	0	0	0	1	0	2	0	0	0	1	0	0	0	0	0	8	0	0	1	9	5	10	11	4	8	10	23	16	13	3	8	4	4	9	43	3	1	27	0	0	0	0	0	0	4	4	1	4	0	9	0	0	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC...........................................................................................................................	24	1	1056.00	1056	29	4	5	23	1	3	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	3	0	0	0	0	2	2	0	0	0	7	0	0	0	0	1	5	0	0	1	2	0	14	4	3	7	32	56	53	41	42	32	55	40	83	371	0	0	3	0	0	0	0	0	1	29	7	47	11	14	15	0	0	2	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAA.........................................................................................................	41	1	903.00	903	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	93	72	61	58	31	63	30	52	41	27	40	30	6	5	12	280	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	866.00	866	21	1	719	9	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	2	2	2	1	2	4	5	3	7	6	4	12	4	3	5	6	26	2	0	4	0	0	0	1	0	0	0	1	0	0	0	0	1	1	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	818.00	818	8	5	299	10	0	3	2	0	0	1	0	0	0	0	18	14	4	5	6	5	0	5	20	2	0	1	1	0	7	10	3	2	0	11	0	0	0	1	1	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	5	22	286	0	0	4	1	0	0	2	7	0	3	2	0	0	3	0	1	3
................................................................................................................................................................................................CACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	700.00	700	19	8	8	28	0	0	1	0	0	1	0	0	0	0	0	2	2	0	2	1	0	1	4	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3	1	1	2	7	9	22	23	15	18	21	45	42	25	41	24	10	14	18	166	2	1	5	0	0	0	0	1	2	2	2	4	3	1	0	2	31	25	20	13
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	654.00	654	0	0	608	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	2	35	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	538.00	538	17	1	4	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	1	0	1	1	1	0	2	0	1	1	2	0	0	0	0	2	5	1	3	4	6	4	9	6	15	11	6	8	9	3	1	8	28	0	0	4	18	0	0	31	19	14	43	27	14	45	22	12	9	43	27	15	28
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	520.00	520	78	20	20	3	0	2	1	0	0	0	0	0	0	0	1	1	1	2	1	1	0	1	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	1	3	7	3	5	3	2	10	9	10	7	3	10	5	20	19	26	76	3	0	0	0	0	0	0	0	0	19	41	28	27	30	14	1	1	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	476.00	476	0	0	420	2	0	1	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	0	0	0	0	4	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	447.00	447	147	50	1	231	0	0	1	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	3	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	433.00	433	322	67	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	2	1	3	5	4	15	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	397.00	397	0	0	323	12	0	0	0	0	0	0	0	0	0	0	1	0	0	3	2	3	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	1	0	0	44	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA...........................................................................................................................	24	1	386.00	386	9	0	3	1	1	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	2	0	1	1	0	0	2	0	0	0	0	0	0	1	0	3	2	2	3	1	3	2	8	2	0	2	7	13	13	5	8	3	8	8	31	73	3	0	3	0	0	0	6	2	2	16	11	25	12	26	22	4	10	15	4	3
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	356.00	356	8	2	32	9	0	0	0	0	0	1	0	0	0	0	1	0	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	1	1	4	5	9	11	6	22	2	21	5	7	7	13	8	10	5	130	2	0	5	0	0	2	0	1	0	0	4	8	0	0	0	0	1	2	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	259.00	259	48	27	13	3	0	0	0	0	0	0	0	0	0	0	4	3	3	0	5	2	0	4	3	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	9	3	0	2	2	0	0	0	0	1	0	19	24	15	24	17	14	0	0	0	3	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	249.00	249	14	3	0	4	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	2	1	3	4	3	5	4	4	11	5	9	7	8	4	3	79	7	0	35	0	0	0	0	0	0	0	1	0	0	0	0	0	9	10	4	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	244.00	244	7	2	4	62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	0	2	1	0	0	0	0	3	0	1	0	3	0	6	8	2	4	1	7	2	1	6	4	6	5	2	43	3	1	14	0	0	0	2	4	10	0	5	0	1	0	3	7	3	2	1	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	234.00	234	10	7	9	48	0	6	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	1	1	1	0	0	1	0	1	2	0	2	0	1	0	0	0	0	0	4	0	1	0	3	2	12	5	6	9	8	8	7	7	9	1	1	3	0	26	7	0	8	0	0	0	0	0	0	0	2	1	5	3	2	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	209.00	209	34	16	4	126	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	11	0	0	0	0	0	0	1	1	4	0	0	1	0	0	0	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	203.00	203	25	12	7	128	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	201.00	201	1	1	57	10	0	0	0	0	0	0	0	0	0	0	6	3	3	8	7	2	0	4	9	1	0	0	1	0	1	3	0	2	0	3	0	1	3	0	0	4	0	0	0	0	0	0	0	0	1	1	0	0	0	2	0	1	0	0	1	4	6	52	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	180.00	180	1	3	55	3	0	1	1	0	0	0	0	0	0	0	3	5	2	5	2	1	0	1	5	2	1	0	0	1	0	7	1	2	0	3	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	1	0	9	2	4	0	1	1	0	6	2	4	6	1	4	11	4	1	0	0	1	5
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	143.00	143	0	0	109	17	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	2	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	132.00	132	6	2	38	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	1	2	0	1	1	3	0	0	3	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	2	50	0	0	0	2	3	1	0	0	0	2	0	1	2	0	0	0	2
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	121.00	121	12	1	2	0	0	0	0	3	1	7	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	8	0	1	2	1	3	5	4	3	6	0	4	2	1	4	2	4	0	2	16	0	0	2	0	0	0	0	0	2	0	2	3	0	0	1	1	2	0	5	4
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	116.00	116	15	3	9	7	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	2	5	1	9	1	7	2	1	5	2	2	0	2	17	1	0	2	0	0	0	0	0	0	1	6	1	2	0	2	0	0	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTCC............................................................................................................................	23	1	109.00	109	15	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	1	0	1	0	0	1	1	0	2	0	2	11	8	16	12	0	0	0	0	0	0	0	0	0	1	0	15	2	8	3	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	93.00	93	5	2	77	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	92.00	92	37	20	12	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	89.00	89	7	2	36	3	0	0	0	0	0	0	0	0	0	0	5	2	1	2	0	1	0	0	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	3	11	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	88.00	88	4	2	8	2	1	0	1	0	0	1	0	0	0	0	1	0	0	1	2	1	0	1	1	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	13	0	0	0	0	1	2	1	0	1	0	1	3	1	1	2	1	8	0	9	4	0	2	0	0	0	0	0	0	0	0	2	0	0	0	1	0	2	2	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAG............................................................................................................	38	1	88.00	88	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	3	6	7	7	0	6	8	3	8	4	0	1	0	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	87.00	87	1	0	19	3	0	0	0	0	0	0	0	0	0	0	2	0	2	4	2	1	0	3	2	1	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	81.00	81	9	5	12	23	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	3	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	1	1	2	2	2	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	81.00	81	0	0	29	6	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	2	0	4	2	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	25	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................CACCCTGTAGATCCGAATTTGTTC............................................................................................................................	24	1	70.00	70	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	1	0	1	1	4	6	2	1	3	2	0	2	30	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC..........................................................................................................................	25	1	69.00	69	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	1	2	9	8	0	0	0	0	0	0	0	0	0	6	2	11	0	6	9	0	0	0	0	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	69.00	69	1	2	40	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	11	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	65.00	65	0	0	34	5	0	0	0	0	1	0	0	0	0	0	1	1	0	0	2	0	0	2	6	1	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	2	0	0	0	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC.................................................................................	25	1	60.00	60	2	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	2	0	1	0	5	3	4	4	0	0	1	1	1	1	14	1	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	51.00	51	3	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	20	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGG......................................................................................	18	1	45.00	45	0	0	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA...........................................................................................................................	24	1	44.00	44	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	1	0	1	1	2	0	1	1	0	2	0	0	1	0	10	0	0	6	0	0	0	2	0	0	0	2	0	0	1	0	0	4	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAAT..................................................................................................................................	17	1	43.00	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	11	15	3	7	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAG.........................................................................................................	41	1	41.00	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	4	2	5	2	4	3	1	0	1	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC...........................................................................................................................	24	1	39.00	39	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	2	2	2	2	2	1	1	1	12	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCC..........................................................................................................................	25	1	36.00	36	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	1	1	1	1	1	2	4	0	3	15	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	36.00	36	0	0	33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAG.........................................................................................	17	1	32.00	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	1	1	1	1	0	0	2	6	6	7	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	29.00	29	1	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	29.00	29	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................CACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	27.00	27	9	1	4	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	27.00	27	0	0	25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTAA...................................................................................	23	1	24.00	24	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	0	0	0	3	2	0	0	0	0	0	1	0	1	0	0	0	2

droGri2

TATAT-ATATATATATATATACATAT--------------------------------------------------------------------------------------------------------------------------AGTTTATATATACTGT---TT------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA------TGAGT----------AAAG---AATAGTGAATAGTGAAT---------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	10470.00	10470	6550	3920
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	4022.00	4022	2104	1918
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	893.00	893	493	400
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	585.00	585	561	24
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	334.00	334	118	216
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	298.00	298	126	172
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	260.00	260	169	91
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	191.00	191	191	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	116.00	116	69	47
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	89.00	89	40	49
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	56.00	56	53	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	32.00	32	17	15
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	29.00	29	19	10
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	29.00	29	29	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	27.00	27	1	26
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	26.00	26	2	24
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	23.00	23	1	22
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	20.00	20	20	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	18.00	18	15	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	17.00	17	11	6
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	17.00	17	17	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	14.00	14	11	3
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	12.00	12	12	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	12.00	12	12	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	11.00	11	10	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	9.00	9	9	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	9.00	9	9	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	9.00	9	9	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	8.00	8	8	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	8.00	8	5	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	7.00	7	7	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	7.00	7	7	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	6.00	6	6	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	3.00	3	3	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAAA................................................................................	26	1	3.00	3	1	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	3.00	3	1	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	3.00	3	3	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGC................................................................................	26	1	2.00	2	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	2.00	2	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	2.00	2	2	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAG.......................................................................................	18	1	2.00	2	2	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGG......................................................................................	18	1	2.00	2	2	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	2.00	2	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGG...........................................................................................................................	24	1	2.00	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT..................................................................................	24	1	2.00	2	0	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	2.00	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCC...............................................................................	27	1	2.00	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGC.................................................................................	25	1	2.00	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	2.00	2	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	2.00	2	1	1
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	2.00	2	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG.................................................................................	25	1	2.00	2	2	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT....................................................................................	18	1	1.00	1	1	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTT..................................................................................	22	1	1.00	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAG...........................................................................................................................	24	1	1.00	1	1	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTGTT................................................................................	25	1	1.00	1	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCA...............................................................................	27	1	1.00	1	1	0
.......................................................................................................................................................................................................................GTACACTAGCT-TTAAGGAA.........................................................................................................	19	1	1.00	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCT..........................................................................................................................	25	1	1.00	1	1	0
................................................................................................................................................................................................................................................CGGTTCTAGAGAGGTTTA..................................................................................	18	1	1.00	1	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	1.00	1	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA.................................................................................	25	1	1.00	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTA..........................................................................................................................	25	1	1.00	1	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAG.................................................................................	25	1	1.00	1	1	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTGT.................................................................................	23	1	1.00	1	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGA..............................................................................................................................	21	1	1.00	1	0	1
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTTT............................................................................................................................	20	1	1.00	1	0	1
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	1.00	1	1	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	1.00	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTATG...........................................................................................................................	24	1	1.00	1	1	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTTT..................................................................................	21	1	1.00	1	1	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTT................................................................................................................................	18	1	1.00	1	1	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTTG..................................................................................	19	1	1.00	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	1.00	1	1	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTG............................................................................................................................	22	1	1.00	1	1	0

droWil2

TAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	263241.00	263241	14990	17712	11613	199894	19032
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	81969.00	81969	7722	30545	6283	34289	3130
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	17650.00	17650	7555	2050	1166	5397	1482
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	17478.00	17478	6857	4628	1722	3382	889
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	4828.00	4828	830	1869	949	868	312
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	3374.00	3374	183	594	291	1854	452
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	2623.00	2623	3	2353	45	208	14
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	2395.00	2395	130	677	485	849	254
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	2139.00	2139	146	1003	529	239	222
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	1943.00	1943	1298	387	92	113	53
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	1671.00	1671	33	1601	2	26	9
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	499.00	499	14	284	110	60	31
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	397.00	397	155	33	10	184	15
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	356.00	356	8	302	14	24	8
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	348.00	348	110	8	17	182	31
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	323.00	323	321	0	0	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	295.00	295	275	1	2	14	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	207.00	207	86	29	1	81	10
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	204.00	204	8	192	1	0	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	199.00	199	164	13	0	20	2
.......................................................................................................................................................................................................................TTATACTAGTTTTTAAGGA..........................................................................................................	19	1	186.00	186	0	1	0	182	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	169.00	169	1	152	6	8	2
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	166.00	166	21	95	7	33	10
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	157.00	157	1	139	11	6	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	149.00	149	1	85	12	44	7
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	125.00	125	78	8	9	22	8
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	124.00	124	44	25	7	24	24
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC...........................................................................................................................	24	1	123.00	123	106	6	4	0	7
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	111.00	111	4	57	4	37	9
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT.................................................................................	25	1	103.00	103	1	30	29	16	27
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	83.00	83	53	16	6	5	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	80.00	80	0	74	2	3	1
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	73.00	73	9	56	1	6	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	70.00	70	56	4	4	1	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	65.00	65	2	37	9	14	3
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	63.00	63	2	59	1	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	61.00	61	8	5	3	32	13
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	60.00	60	39	9	2	8	2
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	59.00	59	0	59	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	59.00	59	44	3	6	6	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	57.00	57	0	47	4	5	1
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	56.00	56	18	13	3	21	1
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	55.00	55	1	45	0	5	4
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	51.00	51	44	2	3	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	44.00	44	22	12	2	7	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	41.00	41	7	23	3	8	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	40.00	40	0	39	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	38.00	38	0	5	2	29	2
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	31.00	31	6	6	3	12	4
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	30.00	30	4	14	10	1	1
.......................................................................................................................................................................................................................TTATACTAGTTTTTAAGGAA.........................................................................................................	20	1	29.00	29	0	0	0	29	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAG.......................................................................................	18	1	29.00	29	0	27	1	0	1
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTTTT...........................................................................................................................	22	1	28.00	28	2	0	0	26	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC..........................................................................................................................	25	1	28.00	28	26	1	0	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	27.00	27	1	7	2	14	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCC.................................................................................	25	1	26.00	26	14	0	1	0	11
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTTT............................................................................................................................	21	1	25.00	25	3	4	1	11	6
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	23.00	23	12	0	0	11	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAT.................................................................................	25	1	23.00	23	3	1	7	6	6
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	22.00	22	0	21	0	0	1
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	22.00	22	0	13	2	7	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT......................................................................................................................	29	1	21.00	21	21	0	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	21.00	21	10	9	1	1	0
........................................................................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGGT.....................................................................................	23	1	20.00	20	0	0	1	17	2
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	19.00	19	4	14	0	1	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT....................................................................................	18	1	16.00	16	1	15	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT......................................................................................	20	1	16.00	16	4	11	1	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG....................................................................................	22	1	13.00	13	7	2	1	0	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	13.00	13	1	4	2	4	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTT................................................................................	26	1	13.00	13	0	2	6	4	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA...........................................................................................................................	24	1	12.00	12	4	3	1	3	1
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGT.....................................................................................	19	1	12.00	12	0	9	3	0	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGT.....................................................................................	22	1	11.00	11	0	2	3	6	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAA.......................................................................................	19	1	11.00	11	0	4	7	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTCC...................................................................................	23	1	10.00	10	9	0	0	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	10.00	10	4	3	2	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA...........................................................................................................................	24	1	9.00	9	4	1	1	0	3
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGG......................................................................................	18	1	9.00	9	0	8	0	1	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT....................................................................................	19	1	9.00	9	0	8	0	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	9.00	9	0	7	0	0	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCCC................................................................................	26	1	8.00	8	2	0	1	0	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGA......................................................................................	20	1	7.00	7	0	2	2	0	3
........................................................................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGG......................................................................................	22	1	6.00	6	0	1	0	4	1

dp5

T-------------TTATTAATATTTTCACTT-T---TTTTT-CCAGTC----CTGATTGCTCACCTC-------------------TCGGCGCCCTCGGGCA-TGG--------CACCGG--GCTCCACACCCCGTCCTCTGCAGGCAGTTTTTTT----GGTTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	206200.00	206200	2076	66242	85181	4923	18078	3324	18385	1699	202	6090
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	149614.00	149614	701	76579	43845	4367	3262	3150	16970	143	38	559
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	26194.00	26194	631	14371	3865	1090	348	804	4676	19	11	379
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	15428.00	15428	821	6831	3172	538	463	523	1605	86	17	1372
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	11179.00	11179	6	16	10694	413	23	6	21	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	6521.00	6521	2	6212	121	13	17	12	142	0	0	2
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	6275.00	6275	15	6167	36	5	8	1	42	1	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	5847.00	5847	61	2996	269	114	84	233	1449	9	10	622
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	3705.00	3705	13	2600	58	25	26	78	795	3	3	104
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	3651.00	3651	14	1531	338	105	74	90	1488	4	2	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	3630.00	3630	1	22	3413	177	1	5	11	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	3018.00	3018	25	1525	730	97	154	38	351	39	4	55
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	2404.00	2404	75	1933	36	7	15	76	127	4	3	128
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	1183.00	1183	0	1121	7	4	3	6	38	0	2	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	712.00	712	15	7	572	110	1	3	3	0	0	1
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	617.00	617	2	611	0	0	0	1	1	0	0	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	584.00	584	1	427	7	3	14	13	111	2	0	6
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	389.00	389	1	5	312	67	0	0	4	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	384.00	384	0	368	14	2	0	0	0	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	344.00	344	2	314	11	1	5	1	7	0	1	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	341.00	341	21	145	101	5	15	2	22	9	1	20
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	333.00	333	16	103	109	12	24	9	10	12	13	25
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	302.00	302	1	197	32	3	10	7	47	0	0	5
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	279.00	279	1	17	228	14	6	3	9	0	0	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	254.00	254	0	243	0	0	0	1	9	0	0	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	217.00	217	0	208	0	0	0	1	8	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	186.00	186	0	186	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	179.00	179	0	155	10	3	8	0	3	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	159.00	159	5	88	37	4	10	3	11	0	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	157.00	157	1	29	117	3	1	0	4	2	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	152.00	152	0	131	2	0	1	0	18	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	124.00	124	10	82	8	3	6	0	1	6	0	8
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	107.00	107	2	9	75	17	0	1	3	0	0	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	106.00	106	0	99	5	2	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	106.00	106	26	58	6	0	4	0	0	4	1	7
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	96.00	96	0	88	4	4	0	0	0	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	96.00	96	1	79	10	1	1	1	3	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	88.00	88	0	72	3	0	2	2	9	0	0	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	85.00	85	0	63	13	1	0	0	7	0	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	83.00	83	2	23	39	7	5	1	4	2	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	74.00	74	0	52	3	1	7	5	2	0	0	4
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	66.00	66	0	41	11	0	2	4	7	1	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	65.00	65	3	49	2	0	3	1	5	0	0	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGAC.............................................................................................................................	22	1	60.00	60	0	0	60	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	55.00	55	0	49	2	0	2	0	2	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	55.00	55	0	54	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	53.00	53	0	6	41	4	0	1	1	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	50.00	50	3	40	3	0	0	0	1	0	0	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	49.00	49	2	35	0	1	0	1	10	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	43.00	43	10	21	6	2	1	0	2	0	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	40.00	40	0	27	5	2	0	1	5	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGGC.............................................................................................................................	22	1	35.00	35	0	0	34	1	0	0	0	0	0	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	31.00	31	1	23	1	0	2	0	2	0	0	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	28.00	28	1	3	7	0	11	1	1	0	1	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	27.00	27	0	12	0	0	1	3	10	0	0	1
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGC..............................................................................................................................	22	1	27.00	27	0	0	24	2	0	0	0	1	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	24.00	24	0	18	3	0	0	0	2	0	0	1
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	23.00	23	0	22	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT....................................................................................	18	1	23.00	23	0	21	1	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT......................................................................................	20	1	23.00	23	0	16	1	0	0	1	5	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT....................................................................................	19	1	22.00	22	0	21	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	22.00	22	12	1	6	0	2	0	1	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAG.......................................................................................	18	1	22.00	22	0	21	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	18.00	18	0	12	0	0	0	1	2	0	0	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTG..................................................................................	23	1	16.00	16	0	13	3	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	13.00	13	0	4	7	1	0	0	1	0	0	0

droPer2

T-------------TTATTAATATTTTCACTT-T-----TTTTCCAGTC-----CGATTGCTCACCTC-------------------TCGGCGCCCTCGGGCT-TGG--------CACCGG--GCTCCACACCCCGTTCTCTGCAGGCAGTTTTTTT----GGTTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	54754.00	54754	13316	7935	2966	1022	3912	25603
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	29652.00	29652	5917	10002	768	1580	3744	7641
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	6958.00	6958	1742	1749	113	437	939	1978
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	5574.00	5574	1997	696	104	177	761	1839
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	1868.00	1868	350	404	21	90	265	738
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	1019.00	1019	19	348	6	22	83	541
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	879.00	879	124	729	1	1	2	22
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	869.00	869	46	164	13	50	148	448
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	864.00	864	5	790	8	9	23	29
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	711.00	711	101	123	30	11	57	389
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	522.00	522	196	125	8	22	71	100
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	288.00	288	243	10	7	3	10	15
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	210.00	210	151	20	1	2	8	28
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	190.00	190	170	12	3	0	1	4
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	163.00	163	151	10	1	0	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	158.00	158	10	58	9	8	14	59
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	148.00	148	3	129	0	2	4	10
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	119.00	119	118	0	0	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	106.00	106	73	12	1	2	9	9
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	90.00	90	20	68	0	0	0	2
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	76.00	76	10	48	1	2	2	13
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	67.00	67	65	0	0	0	1	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	62.00	62	1	23	4	3	14	17
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	59.00	59	28	24	1	1	3	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	52.00	52	32	2	2	3	7	6
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	45.00	45	0	44	0	1	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	42.00	42	17	11	1	2	5	6
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	40.00	40	22	12	0	1	1	4
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	39.00	39	31	5	0	1	1	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	36.00	36	7	13	8	1	4	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	36.00	36	0	33	0	0	1	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	35.00	35	31	2	0	0	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	34.00	34	32	1	0	0	0	1
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	31.00	31	15	6	0	0	0	10
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	30.00	30	8	13	0	2	3	4
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	29.00	29	0	29	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	25.00	25	5	6	2	1	1	10
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	21.00	21	18	0	0	0	3	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	20.00	20	16	1	0	0	0	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	20.00	20	4	13	0	0	2	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	20.00	20	16	1	0	0	1	2
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	17.00	17	0	13	0	0	3	1
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	16.00	16	2	9	1	1	0	3
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	15.00	15	1	14	0	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	14.00	14	8	4	0	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	14.00	14	4	8	0	0	0	2
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGG..............................................................................................................................	22	1	14.00	14	14	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	14.00	14	0	6	0	0	3	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG....................................................................................	22	1	13.00	13	4	6	0	0	3	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	12.00	12	0	5	0	1	4	2
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	11.00	11	0	10	0	0	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	11.00	11	7	1	0	1	2	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	9.00	9	4	1	0	1	1	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT......................................................................................	20	1	9.00	9	4	2	0	0	1	2
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	8.00	8	0	8	0	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGG......................................................................................	18	1	7.00	7	0	6	0	0	0	1
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGC..............................................................................................................................	22	1	7.00	7	6	0	0	0	1	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTT................................................................................................................................	18	1	7.00	7	6	1	0	0	0	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	6.00	6	0	6	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	5.00	5	0	2	0	0	0	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	4.00	4	1	2	0	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	4.00	4	1	0	0	0	0	3

droAna3

C-----------------------------------------------------------------------------CGCC-TCACCCAACACCGTCACACCTTGC--------GGCTGT--GC--------------------------------------TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCG---------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	107386.00	107386	30654	25704	2519	2718	19236	26555
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	72010.00	72010	37540	11911	479	2054	16536	3490
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	10625.00	10625	4054	1411	93	436	1991	2640
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	10012.00	10012	3827	868	39	523	3524	1231
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	4130.00	4130	1220	161	8	181	1417	1143
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	3914.00	3914	1462	256	34	101	783	1278
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	3125.00	3125	2940	43	3	14	104	21
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	3098.00	3098	802	90	7	228	1757	214
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	2941.00	2941	51	2837	2	4	18	29
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	2785.00	2785	2761	11	0	0	7	6
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	1659.00	1659	485	22	2	80	963	107
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	1543.00	1543	1139	20	4	53	225	102
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	656.00	656	7	622	1	3	22	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	368.00	368	103	10	5	23	195	32
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	367.00	367	364	1	0	0	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	346.00	346	4	321	0	3	15	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	344.00	344	317	2	1	1	18	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	207.00	207	133	14	1	4	47	8
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	205.00	205	85	63	1	1	29	26
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	203.00	203	172	26	0	1	4	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	191.00	191	167	8	1	0	9	6
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	159.00	159	140	2	0	0	5	12
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	132.00	132	112	1	0	1	13	5
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	115.00	115	56	11	9	3	2	34
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	114.00	114	105	3	0	2	1	3
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	105.00	105	104	0	0	0	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	81.00	81	7	67	0	1	5	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	76.00	76	23	14	1	5	22	11
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	72.00	72	21	2	0	4	13	32
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	67.00	67	35	21	0	0	7	4
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	62.00	62	49	1	0	2	8	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	60.00	60	29	2	0	7	20	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGA..............................................................................................................................	21	1	58.00	58	2	0	0	1	36	19
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	53.00	53	20	11	8	3	4	7
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	52.00	52	46	0	0	1	5	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	51.00	51	15	33	0	0	2	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	47.00	47	31	4	1	0	8	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	42.00	42	19	8	0	1	11	3
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	42.00	42	13	16	3	0	5	5
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	42.00	42	32	1	0	1	4	4
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	40.00	40	33	2	1	1	0	3
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	39.00	39	35	0	0	0	4	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	39.00	39	36	3	0	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	39.00	39	30	8	0	0	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	39.00	39	2	0	0	0	33	4
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	38.00	38	24	9	0	0	5	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	38.00	38	26	10	0	0	0	2
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	33.00	33	24	3	1	0	4	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	33.00	33	1	19	0	3	10	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	31.00	31	16	1	0	1	10	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	27.00	27	20	0	0	1	4	2
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	25.00	25	23	1	0	0	0	1
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	24.00	24	20	3	0	0	1	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	23.00	23	6	0	0	1	9	7
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	20.00	20	4	3	1	1	4	7
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	19.00	19	15	2	0	1	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGAC.............................................................................................................................	22	1	18.00	18	0	17	0	0	0	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	16.00	16	16	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTAT................................................................................	26	1	15.00	15	2	0	0	1	6	6
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG....................................................................................	22	1	15.00	15	14	0	0	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	14.00	14	1	1	1	1	9	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA.................................................................................	25	1	13.00	13	8	0	0	0	2	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT......................................................................................	20	1	13.00	13	3	0	0	0	10	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	12.00	12	0	0	0	2	10	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTA...................................................................................	22	1	11.00	11	11	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGGC.............................................................................................................................	22	1	11.00	11	0	10	1	0	0	0

droBip1

TAT---------------------TTTAACCTTT---TTTTT-GCAGCCCACCGTGATTGCCTGCCTT-----------GC------CCGACACCGTCACACCTTGC--------AACTGT------------------------------------------TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTA---------AAAG--AA--------------GAGTGTTT-----------TGT------TA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

T-----------------------------------------------------------------------TCATTATCCC-GC-------------------AGC--------GGCTGT------------------------------------------TCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACG---------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGAGTCA-CTGC-----------------------------------------------------------GTCATTTCAAC-CC-------------------GGC--------GACTGC------------------------------------------TCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CACATGGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----GTGATTGCTCACCT-CAGTTCATTTCGCC-GC-------------------TGC--------GACTGC------------------------------------------TCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCC-------------------------------------------------------------------GTTCATTTCACC-CA-------------------TGCGACG---CGACTGT------------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGA--------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CACATTGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----GTGATTGCGCGCCCTGAGCTCCCTTCGCC-CC-------------------TGC--------GACTGC------------------------------------------TCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCG---------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACATTGTATATGTTTATTAACATTTTCACTT-T---TTTTT-GCAGCC----GTGATTGCCCACCCTGAGTTCACTTCGCC-CC-------------------TGC--------GACTGC------------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATAAAACATTTAAAGTGAA--------ACTGAA--ATG--AAGTGAA---------------A	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CACATTGTATATGTTTATTAACAATTTCACTT-T-----TTT-GCAGCA----GTGATTGCTCACCT-GAGCTCATTCAGCCGCC-------------------TGC--------GACTGTTAGG--------------------------------------TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATAG----CCGAATACGGA--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

CACATTGTATATGTTTATTAACATTTTCACTT-TTTTTTTTT-GCAGCC----GCGATTGCCTAGCG-GACTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	1499097.00	1499097	0	0	0	0	5	6	7	40	22	63	10	7	7	0	11	0	0	6	0	0	21	25	114	7	0	27	1	37	46	155	331	758	6	9	147	128	130	23	12	19	51	23	47	51	88	61	270	32	81	106	108	108	66	0	0	0	156	89	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	2	3	11	1025	174	1222	1117	84	0	2	78	14	446	14	10	57	25	131	293	100	82	168	896	160	33	0	0	9	15	16	24	44	59	328	168	4	202	19	206	266	2	124	1	155	113	503	16	45	3	30	47	0	0	4	2	15	16	27	22	36	0	3078	6490	10779	15905	986	132	374	408	315	106	4381	159	152	202	45	0	0	0	0	0	0	10	10	1	9	14	1212	1161	0	1031	92	40	681	846	171	349	47	1092	379	2466	286	53	4	10	15	3	2107	12971	7436	5420	5362	130	4	0	17103	68	26571	762	5	11	5	0	15	2146	3772	51	16	174	25	7	64	0	0	0	993	3753	24752	49863	173	797	850	2130	128	1584	257	526	25	0	0	23	7	9	0	0	18430	19286	11	7613	902	42	116	1	16	5326	408	8	3957	11	2	1	19760	205	2184	18	6	1838	36936	57	11564	11704	3	51	111	13	372	2	0	3	3838	26618	3550	21714	3201	23658	1591	10517	0	17	9	4	13609	3245	3030	1670	3264	104894	74729	13867	10278	5174	4976	1260	4115	2096	6628	28729	40	51934	68214	9	299	434	7837	9909	98527	1096	275	80	17	14425	104	1716	57	142554	1252	24289	8423	34538	24384	87099	63646	87029	72	12	1374	16331	27	52
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	647414.00	647414	0	0	0	0	68	94	33	131	144	351	160	79	118	0	1	0	0	12	3	0	15	16	126	29	0	14	1	39	38	165	966	1865	6	4	50	32	51	11	5	7	34	11	33	34	63	41	124	19	38	31	38	72	41	0	0	0	1582	1531	330	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	3	2	61	2638	552	3378	2487	312	0	15	580	132	3504	195	103	400	409	903	2272	314	256	950	2314	1019	333	26	10	78	86	250	332	303	373	1186	1353	52	2368	6	510	169	3	84	1	88	98	341	10	235	37	413	244	0	5	0	3	44	20	26	18	19	2	467	1984	2789	2529	167	97	153	222	132	57	1833	28	34	52	23	0	0	0	0	0	7	0	0	1	11	4	3117	3216	0	2579	82	45	1176	2262	191	1082	44	2375	258	4543	90	37	0	10	1	0	2359	11802	2850	2044	2288	17	0	7	5157	56	11727	605	0	2	0	0	0	1939	1934	25	13	78	24	14	50	4	0	0	411	2846	17790	14386	426	1694	971	1788	389	2202	629	973	6	0	0	5	21	6	0	0	8595	6734	4	2253	984	34	36	0	10	2208	505	4	2618	6	2	0	4034	41	879	8	2	528	12780	18	6394	6413	1	21	70	3	128	1	3	0	1153	5416	1197	4528	905	5414	522	2440	0	7	4	4	3291	5155	7869	4894	5234	37077	41073	7337	5948	2140	7017	355	729	577	1400	18000	5	23984	15096	2	67	177	1315	2194	29448	374	62	30	10	4371	45	496	28	27459	356	20374	9463	26625	16947	25186	29748	26158	95	0	296	2173	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	138858.00	138858	0	0	0	0	5	17	4	16	8	32	12	8	9	0	15	0	0	2	0	0	0	1	54	95	0	7	0	19	9	52	195	349	2	5	9	7	12	1	4	1	3	2	13	9	23	4	34	2	17	8	9	8	8	0	0	0	206	202	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	14	262	24	181	124	26	0	1	95	15	280	29	11	21	20	87	419	27	19	195	555	209	42	0	0	9	0	15	51	28	20	80	116	8	255	10	160	97	5	42	1	59	64	256	5	73	20	112	56	0	2	9	24	4	2	1	0	3	3	58	305	330	385	13	10	14	34	12	5	346	3	1	11	2	0	0	0	0	0	0	0	0	0	0	0	689	720	0	562	41	22	193	391	58	217	9	584	90	1018	34	11	0	0	0	0	540	633	456	312	470	5	0	1	1120	5	1252	113	0	5	0	0	0	150	273	9	0	23	1	0	0	0	0	0	35	302	2822	1709	48	341	108	246	47	411	79	175	1	2	0	1	18	6	0	0	773	670	2	556	313	8	7	0	2	620	302	0	879	2	0	0	761	3	196	1	1	80	1947	1	1662	987	0	6	3	0	24	1	0	0	183	908	173	622	206	1018	108	498	0	1	0	1	1070	1957	2107	2071	2294	2758	4590	1779	1070	371	2162	105	243	152	322	5020	4	6004	4526	0	2	29	387	581	6261	82	12	6	2	838	3	60	5	4814	83	8649	6186	10282	5093	5200	7348	6685	30	1	70	333	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	131646.00	131646	0	0	0	0	0	2	0	1	1	6	1	3	1	0	1	0	0	0	0	0	2	7	14	0	0	4	0	6	5	14	73	126	1	1	50	8	11	4	2	0	6	1	2	4	6	3	10	1	3	7	4	4	1	0	0	0	107	88	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	7	10	1	23	55	4	0	0	25	8	99	10	4	18	34	53	75	11	8	81	157	86	15	0	0	0	2	7	6	19	13	22	17	1	38	3	81	20	0	8	2	24	23	64	4	9	1	13	15	0	2	1	6	5	1	0	1	4	1	138	286	421	151	9	20	23	48	14	8	577	7	12	8	0	0	0	0	1	0	0	0	0	0	0	0	315	346	0	213	9	8	188	145	17	80	5	330	45	638	77	0	0	10	3	0	635	1593	722	479	423	17	0	1	1934	6	1861	116	1	0	1	0	0	52	191	25	2	23	6	0	0	0	0	0	76	265	2319	4247	22	169	78	208	15	206	24	63	3	0	0	0	8	2	0	0	775	840	1	610	206	10	4	0	3	463	116	1	378	2	1	0	1344	14	168	3	1	160	2998	4	1650	732	0	8	7	1	29	0	0	0	470	3574	383	2487	384	2978	215	1371	0	3	1	0	3423	1234	1095	650	1712	1615	3267	2090	1499	783	968	96	285	177	520	3997	2	5713	7507	1	30	41	714	832	8743	119	18	6	4	2174	12	151	3	6102	107	3899	2840	4945	1977	5662	4659	6871	26	3	88	816	1	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	31375.00	31375	0	0	0	0	2	6	0	0	4	8	0	0	2	0	2	1	0	2	0	0	0	2	24	23	0	0	0	2	1	13	37	65	0	2	2	3	6	0	1	0	1	0	3	0	5	3	4	1	1	1	2	2	0	0	0	0	72	65	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	22	6	2	20	0	0	0	17	4	41	8	1	3	10	24	161	9	2	24	55	72	10	0	0	1	0	3	8	8	6	8	24	1	40	1	41	11	1	10	0	13	9	24	1	14	6	25	8	0	2	5	22	0	3	0	0	3	3	16	31	68	10	2	4	5	7	4	1	84	0	0	3	2	0	0	0	0	0	0	0	4	0	0	0	120	127	0	68	3	3	30	70	14	42	1	105	8	141	4	0	0	0	0	0	72	239	139	49	95	3	0	0	252	1	280	25	0	3	0	0	0	23	69	0	1	7	2	2	3	0	0	3	26	142	1164	903	16	40	27	46	7	77	6	20	0	0	0	1	16	7	0	0	205	136	0	146	75	4	2	0	0	206	80	0	231	0	0	0	259	7	54	0	0	20	591	2	905	507	0	6	4	0	11	0	0	0	29	180	21	118	43	227	22	99	1	1	4	0	541	512	406	375	525	203	624	356	208	65	347	35	78	22	72	1252	1	1134	999	0	1	6	86	164	1811	38	7	2	0	303	1	38	2	1745	19	1267	1302	1735	1269	1083	1134	1380	7	0	26	64	1	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	18860.00	18860	0	0	0	0	0	2	1	5	1	6	1	1	3	0	1	0	0	0	0	0	0	1	13	0	0	1	0	0	0	0	0	0	0	0	0	3	2	0	0	0	1	0	0	0	5	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	16	18	1	0	0	2	1	29	3	1	2	6	15	28	2	2	9	26	16	3	0	0	0	0	2	2	2	1	5	9	0	24	0	10	3	0	2	0	0	1	11	0	12	0	8	1	0	0	0	0	0	0	0	0	5	0	11	68	110	92	3	0	4	4	4	2	43	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	39	82	0	44	4	3	29	30	5	18	1	54	9	98	7	0	0	0	0	0	48	231	31	51	52	0	0	0	52	1	421	26	0	0	0	0	0	42	46	0	0	1	0	0	0	0	0	0	13	46	365	242	4	25	10	14	10	34	15	29	0	0	0	0	10	5	0	0	93	66	0	77	33	0	1	0	0	54	22	0	95	0	0	0	100	0	53	1	0	4	125	1	63	64	0	1	0	0	3	0	0	0	34	218	74	428	57	329	48	184	0	0	0	0	58	289	163	149	128	272	342	80	67	33	308	14	43	42	78	648	0	1169	614	0	4	8	42	122	819	13	0	1	0	78	2	12	0	921	15	1104	978	1346	853	608	1213	985	1	0	20	62	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	15056.00	15056	0	0	0	0	1	1	0	0	0	1	0	0	0	0	2	0	7	4	0	0	0	0	7	5	0	0	0	0	0	0	0	0	0	0	325	1	1	3	0	0	0	0	1	0	0	1	0	0	0	1	2	0	1	0	0	0	11	10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	2	4	0	0	0	3	1	5	1	1	1	3	3	13	2	0	1	0	18	0	0	0	0	0	1	1	0	1	3	3	0	7	0	19	8	0	5	0	10	5	22	1	5	19	10	4	3	8	15	35	1	0	5	5	4	6	14	18	48	0	0	0	0	1	2	3	26	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	33	84	0	22	1	5	14	23	10	15	5	49	7	78	12	0	0	0	0	0	40	77	39	15	31	0	0	0	71	0	52	5	0	3	0	0	0	0	10	0	0	3	1	0	0	0	0	0	8	68	550	466	0	37	6	16	1	21	5	6	1	0	2	1	5	2	0	0	24	21	0	4	23	1	1	0	1	57	55	0	105	0	0	0	93	2	15	0	0	6	105	0	274	99	0	2	0	0	5	0	0	0	25	76	5	59	9	77	10	36	0	0	0	1	301	203	115	180	254	61	100	130	63	16	231	1	28	2	29	41	0	23	34	0	0	3	48	90	893	25	0	0	0	331	1	15	0	679	10	1234	2213	1004	577	618	697	901	5	0	9	30	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	13353.00	13353	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	2	0	1	0	0	0	0	1	0	0	0	0	0	2	0	3	0	0	0	0	0	1	0	2	1	3	0	0	0	0	0	0	0	0	0	26	22	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	7	7	0	0	0	1	0	2	0	0	0	0	0	2	1	2	0	13	0	2	0	0	0	0	1	0	1	0	1	2	0	4	0	0	0	0	0	0	2	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	43	75	64	2	5	1	2	3	0	44	1	4	0	2	0	0	0	0	0	0	0	0	0	0	0	5	14	0	5	0	0	4	8	0	2	1	15	8	19	5	0	0	0	0	0	6	90	47	32	37	0	0	0	115	1	280	11	0	0	0	0	0	32	45	3	3	0	3	0	0	0	0	0	5	23	169	364	5	11	13	31	0	20	0	8	0	0	0	1	7	6	0	0	102	90	0	89	6	1	1	0	0	84	4	0	58	0	0	0	209	0	11	0	0	18	262	2	87	141	0	4	1	0	3	0	0	0	34	336	69	353	43	331	30	241	0	1	0	0	154	23	6	10	15	164	221	67	33	53	47	19	55	24	60	194	0	519	613	0	6	6	71	126	1023	11	4	0	0	168	2	12	0	1402	15	249	60	496	305	887	674	843	2	2	39	196	2	0
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.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	1044.00	1044	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	8	0	2	0	0	0	0	3	0	0	1	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	34	16	0	0	5	5	15	7	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	2	5	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	14	0	0	2	1	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	17	0	2	4	0	0	0	0	0	0	0	0	95	570	2	17	2	12	1	4	0	0	0	0	2	1	0	1	0	3	0	2	2	0	1	0	0	0	1	2	0	6	3	0	0	18	53	1	14	0	0	0	0	1	0	1	0	22	0	1	0	4	5	10	6	5	0	0	0	0	0	0
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...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	930.00	930	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	2	2	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	5	3	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	9	0	4	0	0	6	7	4	3	0	8	2	21	9	0	0	0	0	0	12	2	3	0	2	0	0	0	5	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	25	9	0	3	1	0	0	1	1	0	0	0	0	0	0	0	0	0	6	3	0	5	3	0	0	0	0	3	2	0	6	0	0	0	8	0	1	0	0	0	12	0	7	13	0	0	0	0	0	0	0	0	0	5	2	3	0	7	0	2	0	0	0	0	4	10	14	11	19	25	39	12	8	4	13	1	3	2	6	40	0	42	35	0	0	0	3	2	43	0	0	0	0	8	0	0	0	28	0	56	33	55	34	27	37	39	2	0	0	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	812.00	812	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	6	14	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	22	6	32	3	28	0	0	0	0	1	2	1	2	0	0	0	0	2	0	15	1	0	0	0	0	0	1	1	0	0	7	0	0	10	0	0	0	0	0	14	110	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	9	0	3	1	0	0	0	0	4	0	0	0	0	0	0	2	0	1	0	0	3	9	0	3	3	0	0	0	0	0	0	0	0	6	7	1	0	6	4	2	6	0	0	0	0	29	9	12	7	1	17	8	2	1	0	28	1	0	2	0	48	0	113	129	0	0	0	0	0	10	0	0	0	0	1	0	0	0	7	0	1	1	0	1	1	4	5	0	0	0	0	0	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	805.00	805	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	1	1	0	0	0	0	0	2	0	0	0	0	1	1	0	0	1	0	1	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	11	11	20	2	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	0	0	0	0	0	0	4	39	15	29	17	0	0	0	46	0	132	18	0	0	0	0	0	0	1	4	0	5	0	0	0	0	0	0	0	1	24	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	13	0	1	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	2	0	2	3	0	0	0	0	1	0	0	0	0	10	0	0	0	7	0	6	0	0	0	0	6	0	2	0	1	44	29	5	4	3	3	1	1	1	2	12	0	13	19	0	1	0	2	3	1	0	0	0	0	3	0	1	0	29	2	20	2	9	9	25	17	33	0	0	0	1	0	3
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	729.00	729	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	152	436	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	0	0	0	1	1	0	0	3	0	0	0	0	0	2	0	3	0	0	0	0	0	3	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	27	30	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	5	9	0	1	1	0	0	0	0	1	0	0	0	0	0	0	2	0	1	0	0	1	5	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	2	2	1	1	2	0	2	0	0	0	0	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
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..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC.................................................................................	25	1	225.00	225	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	156	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	220.00	220	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	1	0	0	0	0	4	0	4	0	0	0	0	0	0	9	1	1	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	1	0	0	0	0	0	0	0	0	0	2	0	2	2	5	0	1	0	0	0	0	3	5	8	4	6	2	3	1	2	0	4	0	1	0	0	19	1	15	9	0	0	0	0	0	6	0	0	0	0	1	0	0	0	8	0	6	11	10	6	10	1	5	0	0	1	1	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	212.00	212	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	26	17	0	0	4	3	0	2	0	0	0	0	0	2	0	0	1	0	0	0	2	0	0	0	0	0	6	0	3	0	0	0	0	0	0	0	0	0	1	9	0	1	0	6	1	4	0	0	0	0	2	0	0	0	1	14	9	3	1	0	1	1	0	0	0	1	0	2	1	0	0	1	0	0	7	0	0	0	0	1	0	1	0	9	0	1	1	5	1	12	9	3	0	0	0	3	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT..................................................................................	24	1	203.00	203	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	109	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	1	3	0	1	0	1	0	0	0	0	0	2	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	9	0	0	0	0	1	0	0	0	2	0	7	4	5	7	0	1	5	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	197.00	197	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	1	0	4	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	4	0	0	0	0	1	6	0	7	1	0	0	0	0	0	0	0	0	0	3	1	0	0	3	0	2	0	0	0	0	14	6	2	4	1	2	0	2	2	0	7	1	0	0	0	21	0	15	8	1	0	0	0	0	5	0	0	0	0	2	0	0	0	3	0	6	5	5	3	6	10	4	0	0	0	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	194.00	194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	0	3	1	0	0	7	1	2	0	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	17	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	15	0	6	0	4	0	1	0	0	0	0	1	2	1	0	1	11	15	2	0	0	3	0	0	0	0	2	0	4	10	0	0	0	0	3	0	0	0	0	0	1	0	0	0	1	0	3	0	5	1	3	7	4	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	191.00	191	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	1	6	4	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	3	0	2	0	0	0	6	0	6	5	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	12	14	21	10	0	0	7	2	0	0	10	0	0	0	0	12	0	12	15	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	1	1	2	2	4	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAC..................................................................................	24	1	168.00	168	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	133	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	165.00	165	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	2	0	2	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	5	0	3	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	3	3	1	2	2	1	6	3	1	2	0	0	0	0	0	8	0	3	3	0	0	0	0	0	7	0	0	0	0	3	0	0	0	9	0	7	12	7	8	4	6	5	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGA..............................................................................................................................	21	1	162.00	162	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	1	0	0	1	0	0	0	5	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	8	1	4	0	7	0	2	0	0	0	0	23	3	1	1	0	3	3	3	2	0	4	1	1	0	0	9	0	5	23	0	0	0	1	0	9	1	0	0	0	0	0	0	0	0	0	1	1	1	0	0	2	3	0	0	0	0	0	0

droSim2

CACATTGTATATGTTTATTAACATTTTCACTT-T---TTTTT-GCAGCC----GCGATTGCCCAGCG-GAGTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	217078.00	217078	11214	37469	88348	9099	774	344	16516	2920	12743	10253	321	26268	4	798	1	2	4
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	135074.00	135074	8051	17723	31242	16053	2151	1096	1669	434	6866	6748	86	3740	142	38291	187	167	428
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	44410.00	44410	10283	17348	9132	851	326	179	2422	432	1649	1176	26	491	0	95	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	44113.00	44113	10364	13682	5654	2192	182	106	1262	299	1986	1470	2	278	36	6529	9	22	40
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	9073.00	9073	934	2072	1657	1035	324	139	475	97	516	375	6	104	13	1307	3	5	11
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	9034.00	9034	3614	3379	557	162	723	261	138	31	106	43	1	11	0	8	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	4033.00	4033	85	130	453	1	2	3	52	3212	37	30	0	5	12	11	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	2895.00	2895	562	1443	877	9	0	0	2	0	0	0	0	2	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	2345.00	2345	286	420	415	6	882	313	8	3	5	5	1	1	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	1975.00	1975	665	848	459	1	0	0	0	0	0	1	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	1763.00	1763	209	404	83	239	294	169	126	26	80	54	1	26	0	49	1	1	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	1563.00	1563	8	18	37	1278	6	2	3	0	20	22	0	18	1	149	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	1516.00	1516	72	475	736	16	0	0	52	14	103	39	0	7	0	2	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	1366.00	1366	126	329	851	7	0	0	2	1	7	8	1	34	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	1301.00	1301	58	353	335	130	78	34	70	13	27	17	4	167	0	15	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	1290.00	1290	81	124	249	818	1	0	3	1	5	5	0	3	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	1283.00	1283	7	20	5	14	803	381	5	1	16	28	0	3	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	1235.00	1235	60	221	110	183	0	0	27	7	13	14	1	69	0	520	1	3	6
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	1213.00	1213	19	23	5	31	706	333	28	6	24	26	1	6	0	3	0	0	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	1035.00	1035	173	234	64	8	368	137	17	8	9	12	0	4	0	1	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	441.00	441	111	137	170	5	0	0	3	0	1	3	0	2	0	9	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	439.00	439	74	163	175	23	0	0	1	1	0	0	0	0	0	2	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	401.00	401	2	6	4	29	0	0	20	5	29	31	0	5	1	267	0	1	1
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	365.00	365	57	89	199	7	2	0	1	0	0	1	0	8	0	1	0	0	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	324.00	324	22	53	196	1	0	0	3	3	34	8	3	1	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	314.00	314	15	178	91	1	0	0	2	0	19	7	0	0	0	1	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	307.00	307	8	95	195	0	0	0	0	0	0	0	0	9	0	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	298.00	298	11	19	11	203	1	1	2	1	5	6	0	4	0	33	0	0	1
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	287.00	287	21	14	26	1	0	1	4	215	1	1	0	1	0	2	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	273.00	273	101	115	48	5	0	0	0	0	1	0	0	0	0	3	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	271.00	271	70	121	74	4	0	0	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	182.00	182	12	32	94	29	0	0	1	0	0	3	0	10	0	1	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTT................................................................................................................................	20	1	174.00	174	1	0	0	0	0	0	3	170	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	165.00	165	24	31	16	84	0	0	0	8	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	147.00	147	20	25	43	8	0	0	6	30	6	3	0	4	0	2	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	123.00	123	22	37	45	3	0	0	1	0	6	3	0	2	0	4	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	116.00	116	2	6	3	18	0	0	5	1	4	5	0	1	0	71	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	110.00	110	1	2	6	91	1	0	1	1	2	1	0	0	0	4	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	110.00	110	7	13	62	6	0	0	1	1	6	6	4	4	0	0	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	102.00	102	0	1	2	90	2	1	0	0	0	3	0	0	0	2	0	0	1
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	86.00	86	2	3	27	13	1	2	0	2	5	5	0	1	0	24	0	0	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	85.00	85	5	23	3	19	0	0	2	0	1	0	0	0	0	32	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	77.00	77	11	38	12	5	0	0	3	0	3	2	1	2	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	73.00	73	6	19	36	7	0	0	4	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................GTAGATCCGAATTTGTT.............................................................................................................................	17	1	73.00	73	0	0	0	0	0	0	26	0	32	8	7	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	72.00	72	6	28	24	5	0	0	0	0	0	0	0	2	0	7	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG....................................................................................	22	1	66.00	66	14	32	14	2	0	0	0	0	0	0	0	0	0	4	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	55.00	55	5	5	16	15	4	0	0	0	1	4	0	0	0	5	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	55.00	55	1	3	3	4	0	0	2	3	10	7	0	0	0	22	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGG..............................................................................................................................	22	1	47.00	47	5	14	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGA..........................................................................................	16	1	34.00	34	0	0	0	0	0	0	5	2	10	17	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	33.00	33	0	6	6	7	0	0	5	0	5	1	0	3	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATT.................................................................................................................................	19	1	31.00	31	2	2	4	0	0	0	1	22	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	30.00	30	0	0	2	19	0	0	1	0	0	0	0	0	0	8	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGC..............................................................................................................................	22	1	28.00	28	4	3	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	27.00	27	2	3	6	10	0	0	0	0	0	3	0	1	0	2	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	27.00	27	0	0	0	5	0	0	0	0	1	1	0	0	0	20	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	25.00	25	7	8	5	4	0	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	24.00	24	0	1	6	12	0	0	0	0	0	2	0	0	0	3	0	0	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTT....................................................................................	23	1	23.00	23	4	5	4	3	0	0	1	0	1	2	0	1	0	2	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAG.........................................................................................	17	1	23.00	23	0	0	0	0	0	0	2	0	14	7	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGA..............................................................................................................................	21	1	23.00	23	10	11	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	17.00	17	5	5	1	3	0	0	0	1	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	17.00	17	1	0	0	15	0	0	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	16.00	16	1	1	1	12	1	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGA..............................................................................................................................	22	1	16.00	16	0	0	0	0	0	0	1	15	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	15.00	15	1	1	1	10	0	0	0	0	1	0	0	0	0	1	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTA.............................................................................................................................	23	1	15.00	15	0	1	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAAT..................................................................................................................................	17	1	13.00	13	0	0	0	0	0	0	5	2	1	3	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGG........................................................................................	18	1	13.00	13	8	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGT........................................................................................	18	1	13.00	13	7	4	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	13.00	13	5	5	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT......................................................................................................................	29	1	12.00	12	0	6	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAA..................................................................................	24	1	11.00	11	1	0	0	1	0	0	0	0	0	2	0	0	0	7	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAAT..................................................................................................................................	18	1	10.00	10	0	0	2	0	0	0	0	8	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTAT.........................................................................................................................	26	1	10.00	10	6	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGT..............................................................................................................................	18	1	10.00	10	2	3	2	0	0	1	0	0	1	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTAA............................................................................................................................	23	1	9.00	9	1	7	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAG.......................................................................................	18	1	9.00	9	0	0	0	3	3	3	0	0	0	0	0	0	0	0	0	0	0

droSec2

CACATTGTATATGTTTATTAATATTTTCACTTTT---TTTTT-GCAGCC----GCGATTGCCCAGCG-GAGTTCATTTCGCC-CC-------------------AGC--------GACTGT------------------------------------------TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAA-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	161175.00	161175	35307	77073	38909	9886
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	97296.00	97296	36086	37344	19707	4159
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	19300.00	19300	6131	9706	2042	1421
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	14501.00	14501	3685	8806	897	1113
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	12774.00	12774	3397	6992	1592	793
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	5074.00	5074	1330	2945	253	546
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	3466.00	3466	3420	24	16	6
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	3265.00	3265	2838	284	119	24
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	2161.00	2161	327	1485	190	159
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	1749.00	1749	354	1046	193	156
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	1605.00	1605	643	793	54	115
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	534.00	534	462	53	13	6
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	385.00	385	132	144	69	40
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	372.00	372	366	6	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	311.00	311	266	34	6	5
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	239.00	239	199	30	10	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	190.00	190	25	102	54	9
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	178.00	178	66	63	36	13
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	176.00	176	132	20	23	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	165.00	165	60	72	28	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	119.00	119	113	4	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	118.00	118	35	72	2	9
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	117.00	117	95	21	0	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	84.00	84	44	11	14	15
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	80.00	80	43	17	13	7
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	77.00	77	18	37	13	9
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	74.00	74	17	33	21	3
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	71.00	71	71	0	0	0
.......................................................................................................................................................................................................................TTATACTAGCT-TTAAGGA..........................................................................................................	18	1	66.00	66	0	0	65	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	66.00	66	18	2	41	5
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	65.00	65	27	23	10	5
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	60.00	60	60	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	59.00	59	24	20	13	2
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	58.00	58	38	8	9	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	50.00	50	42	4	4	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	48.00	48	29	12	6	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	47.00	47	33	12	1	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	46.00	46	15	0	26	5
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	40.00	40	18	14	4	4
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	38.00	38	33	3	2	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	36.00	36	8	12	16	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	36.00	36	24	9	3	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	34.00	34	24	5	2	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA.....................................................................................	21	1	31.00	31	6	21	0	4
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	29.00	29	21	8	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	28.00	28	7	15	4	2
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGT..............................................................................................................................	19	1	26.00	26	23	1	1	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGGT.......................................................................................	19	1	26.00	26	8	12	5	1
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	26.00	26	9	12	5	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	26.00	26	3	20	1	2
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	24.00	24	23	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	24.00	24	22	2	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	23.00	23	16	3	2	2
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGT.....................................................................................	19	1	22.00	22	12	9	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	1	21.00	21	4	15	1	1
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGG......................................................................................	18	1	20.00	20	16	1	3	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	20.00	20	7	8	4	1
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	19.00	19	10	5	2	2
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	18.00	18	18	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTG.............................................................................................................................	21	1	18.00	18	18	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	14.00	14	11	2	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT......................................................................................	20	1	13.00	13	7	5	0	1
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAG.......................................................................................	18	1	13.00	13	12	1	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGG........................................................................................	18	1	13.00	13	4	6	0	3
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG.................................................................................	25	1	11.00	11	11	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	11.00	11	4	6	0	1

droYak3

CACATTGTATATGTTTATTAACATTTTCACTT-T-----TTT-GCAGCC----ACGATTGCCCAGCG-AAGTTCATTTCGCC-CC-------------------TGCGACGAACTGA-CGT------------------------------------------TCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGA---------AAAGTGAA--------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	803250.00	803250	4626	19990	740314	19593	595	1515	16585	1	2	2	27
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	72243.00	72243	67	20	72107	32	2	5	10	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	3	71583.33	214750	3719	52642	136605	2727	586	1915	15257	395	18	874	12
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	30913.00	30913	2559	1883	24315	457	173	282	1244	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	8319.00	8319	52	464	7251	179	8	21	344	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	3	7005.67	21017	2345	5805	8552	168	160	478	3402	32	2	61	12
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	4684.00	4684	170	0	4508	2	1	2	1	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	3	2283.00	6849	34	16	6785	2	0	4	7	0	0	1	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	2093.00	2093	16	1864	198	7	0	1	7	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	3	1531.33	4594	3	4141	327	16	3	13	89	0	0	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	3	1356.67	4070	276	1188	964	34	49	153	1335	20	0	51	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	1082.00	1082	443	324	204	10	11	22	68	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	719.00	719	2	7	704	3	1	1	1	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	576.00	576	2	24	539	5	1	0	5	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	3	407.67	1223	49	392	110	10	10	32	590	5	0	25	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	381.00	381	51	64	229	8	2	1	26	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	372.00	372	0	1	370	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGAC.............................................................................................................................	22	1	288.00	288	0	0	288	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	252.00	252	162	0	88	1	0	0	1	0	0	0	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	227.00	227	3	80	130	3	0	2	9	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGGC.............................................................................................................................	22	1	212.00	212	0	0	212	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	198.00	198	10	7	177	0	1	0	3	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	186.00	186	30	23	126	2	1	2	2	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	178.00	178	9	51	107	7	0	0	4	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	173.00	173	8	154	9	0	0	2	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	3	171.67	515	29	4	470	1	0	3	8	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	3	166.00	498	8	459	12	1	0	2	16	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	138.00	138	53	37	47	0	0	1	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	134.00	134	2	25	99	6	0	1	1	0	0	0	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	3	113.00	339	0	252	56	0	0	3	28	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	111.00	111	7	57	44	1	0	1	1	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	3	96.33	289	2	69	13	3	7	14	167	1	0	13	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	77.00	77	2	53	8	2	0	1	11	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC.....................................................................................	21	3	68.67	206	15	1	182	1	0	1	6	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGCC.............................................................................................................................	22	1	66.00	66	0	0	64	1	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	3	64.67	194	0	115	35	6	2	6	29	0	0	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	57.00	57	5	22	28	0	0	0	2	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	53.00	53	26	7	12	0	0	0	8	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	52.00	52	0	5	35	7	1	0	4	0	0	0	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	3	50.33	151	1	44	100	3	0	0	3	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	3	48.67	146	5	11	126	0	1	1	2	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	40.00	40	0	2	36	1	1	0	0	0	0	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGC..............................................................................................................................	22	1	37.00	37	0	0	37	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	3	34.33	103	18	15	63	1	2	1	3	0	0	0	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	3	31.67	95	0	53	39	0	0	0	3	0	0	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	3	30.67	92	2	81	0	0	0	0	9	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	30.00	30	1	29	0	0	0	0	0	0	0	0	0

droEre2

CA--------------------------------------------------------------------GTTCATTTCGCC-CC-------------------TCC--------GAC-GT------------------------------------------TCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGA---------AAAGTGAA--------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTT.............................................................................................................................	22	1	238423.00	238423	48903	62820	948	10865	102365	12522	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT...................................................................................	23	1	130742.00	130742	75348	18814	915	1450	26614	7469	132
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGT..............................................................................................................................	21	1	18168.00	18168	4161	2478	163	294	9770	1222	80
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT....................................................................................	22	1	16487.00	16487	7019	2242	286	149	4892	1884	15
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT...................................................................................	22	1	6342.00	6342	5926	46	3	6	307	45	9
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTT.............................................................................................................................	21	1	4621.00	4621	4584	14	0	0	12	11	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT............................................................................................................................	23	1	4585.00	4585	1445	472	17	77	2259	313	2
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTC.............................................................................................................................	22	1	4023.00	4023	28	3915	1	10	59	10	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT..................................................................................	24	1	3262.00	3262	1286	137	29	31	1328	451	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT.....................................................................................	21	1	2492.00	2492	879	127	60	25	1109	292	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTG...............................................................................................................................	20	1	1587.00	1587	627	15	16	7	800	95	27
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG......................................................................................	20	1	1396.00	1396	427	12	28	8	731	190	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC...................................................................................	23	1	719.00	719	34	581	2	0	12	90	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT....................................................................................	21	1	606.00	606	531	4	1	0	61	9	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGT..............................................................................................................................	20	1	379.00	379	376	1	0	0	0	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGC..............................................................................................................................	21	1	356.00	356	2	348	0	1	4	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA..................................................................................	24	1	348.00	348	186	11	4	3	121	21	2
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG.......................................................................................	19	1	345.00	345	111	4	5	5	190	30	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA............................................................................................................................	23	1	323.00	323	90	59	0	2	159	13	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT...................................................................................	21	1	321.00	321	295	11	1	0	11	3	0
...................................................................................................................................................................................................CCTGTAGATCCGAATTTGTT.............................................................................................................................	20	1	241.00	241	192	12	1	4	18	14	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTA.............................................................................................................................	22	1	158.00	158	35	86	0	5	28	4	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA...................................................................................	23	1	149.00	149	64	0	1	0	17	67	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT............................................................................................................................	22	1	141.00	141	136	1	0	2	2	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT..................................................................................	23	1	138.00	138	113	0	0	1	22	2	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG...................................................................................	23	1	102.00	102	41	20	0	0	6	35	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG..................................................................................	24	1	101.00	101	81	0	2	0	14	4	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTT................................................................................................................................	19	1	91.00	91	53	2	1	1	20	14	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGA........................................................................................	18	1	86.00	86	27	8	1	9	15	26	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC..................................................................................	24	1	78.00	78	43	16	1	1	12	5	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC....................................................................................	22	1	78.00	78	4	69	0	0	2	3	0
.............................................................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT...................................................................................	20	1	77.00	77	59	6	0	2	9	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGG..............................................................................................................................	21	1	68.00	68	57	6	0	0	4	1	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT.....................................................................................	20	1	67.00	67	56	1	0	0	8	2	0
.........................................................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT...................................................................................	24	1	66.00	66	44	6	2	2	9	3	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA...........................................................................................................................	24	1	61.00	61	24	1	0	0	35	1	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC............................................................................................................................	23	1	59.00	59	17	22	0	3	12	5	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG............................................................................................................................	23	1	49.00	49	32	3	0	1	11	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTT...............................................................................................................................	20	1	46.00	46	32	4	0	0	8	2	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT...........................................................................................................................	24	1	44.00	44	11	3	0	1	24	4	1
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTG...............................................................................................................................	21	1	43.00	43	0	0	0	0	0	0	43
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGTG.............................................................................................................................	22	1	42.00	42	21	5	1	7	7	1	0
..............................................................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT...................................................................................	19	1	41.00	41	33	6	0	0	2	0	0
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG......................................................................................	19	1	38.00	38	21	0	0	0	16	1	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG.....................................................................................	21	1	37.00	37	30	2	1	1	3	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGTT.............................................................................................................................	23	1	35.00	35	32	3	0	0	0	0	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTG...............................................................................................................................	19	1	34.00	34	34	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA....................................................................................	22	1	33.00	33	16	0	1	0	12	4	0
............................................................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT....................................................................................	20	1	32.00	32	30	0	0	0	2	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.................................................................................	25	1	30.00	30	17	0	0	0	8	5	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTTGT..............................................................................................................................	22	1	30.00	30	3	1	0	1	1	0	24
...........................................................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA..................................................................................	23	1	27.00	27	22	1	0	0	4	0	0
................................................................................................................................................................................................TACCCTGTAGATCCGAATTT................................................................................................................................	20	1	27.00	27	1	0	0	0	0	0	26
.................................................................................................................................................................................................ACCCTGTAGATCCGAATT.................................................................................................................................	18	1	25.00	25	8	4	0	0	1	12	0
.....................................................................................................................................................................................................TGTAGATCCGAATTTGTT.............................................................................................................................	18	1	25.00	25	9	1	0	0	11	4	0
..................................................................................................................................................................................................CCCTGTAGATCCGAATTTGTG.............................................................................................................................	21	1	25.00	25	25	0	0	0	0	0	0
....................................................................................................................................................................................................CTGTAGATCCGAATTTGTT.............................................................................................................................	19	1	25.00	25	16	0	0	1	4	4	0
...............................................................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT...................................................................................	18	1	20.00	20	20	0	0	0	0	0	0
.................................................................................................................................................................................................ACCCTGTAGATCCGAATTTGGC.............................................................................................................................	22	1	19.00	19	5	14	0	0	0	0	0
..........................................................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG.................................................................................	25	1	17.00	17	17	0	0	0	0	0	0

dmo-mir-10

scaffold_6540:16502912-16502988 +

Known

Unknown

antisense_to_intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads