ID:

dmo-mir-1

 Coordinate:

scaffold_6500:24555186-24555275 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.7 -35.3 -35.3

Flybase annnotation

pre_miRNA [Dmoj\mir-1-RM]; miRNA [Dmoj\miR-1-RA]

No Repeatable elements found

Sense Strand Reads

ACATTAAAGCCAAGAGTGTATGGCCCACAAATGGGTCTTAAATTGTTCATTGCGCCTTTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATTTATATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAGCATCATACCAAACTGTAAAAAAAAACACATTATGAAATTGTGTTTAAA

***************************************************.((((.......((((((((((((.((((((((.(((((..........)).))).)))))))).)))))))))))).......))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V110

male body		 M060

embryo

 V041

embryo

 V056

head

 V049

head
.........................................................................................................TGGAATGTAAAGAAGTATGGAG............................................................... 22 0 1 3195614.00 3195614 1746967 798198 205106 253555 139201 52587
.........................................................................................................TGGAATGTAAAGAAGTATGGA................................................................ 21 0 1 247608.00 247608 180663 49397 4896 374 9100 3178
..........................................................................................................GGAATGTAAAGAAGTATGGAG............................................................... 21 0 1 197023.00 197023 196115 477 144 176 80 31
.........................................................................................................TGGAATGTAAAGAAGTATGGAGT.............................................................. 23 1 1 76793.00 76793 25860 32183 13168 2728 2124 730
.........................................................................................................TTGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 62365.00 62365 1326 1286 59648 60 25 20
.........................................................................................................TGGAATGTAAAGAAGTATGG................................................................. 20 0 1 35553.00 35553 21219 11340 1467 30 1121 376
.........................................................................................................TGGAATGTAAAGAAGTATGGAGA.............................................................. 23 1 1 35444.00 35444 17128 13931 2368 547 1122 348
..........................................................................................................GGAATGTAAAGAAGTATGGA................................................................ 20 0 1 19795.00 19795 19750 33 7 0 3 2
.........................................................................................................TGGTATGTAAAGAAGTATGGAG............................................................... 22 1 1 16809.00 16809 74 106 16153 220 204 52
.........................................................................................................TGGAATGTAAAGAAGTATGGAC............................................................... 22 1 1 9758.00 9758 567 552 8266 140 185 48
.........................................................................................................TGCAATGTAAAGAAGTATGGAG............................................................... 22 1 1 7154.00 7154 506 259 6272 49 51 17
...........................................................................................................GAATGTAAAGAAGTATGGAG............................................................... 20 0 1 6719.00 6719 6204 289 108 69 36 13
.........................................................................................................TGGAATGTAAAGAAGTATGGAA............................................................... 22 1 1 6510.00 6510 3810 2025 157 81 325 112
.........................................................................................................TGAAATGTAAAGAAGTATGGAG............................................................... 22 1 1 5719.00 5719 1036 926 3503 134 68 52
.........................................................................................................TGGAATGTAAAGAAGTATG.................................................................. 19 0 1 4908.00 4908 2980 1609 53 2 194 70
.........................................................................................................TGGAATGTAAAAAAGTATGGAG............................................................... 22 1 1 4698.00 4698 4313 202 66 67 31 19
.........................................................................................................TGGAATGTAAGGAAGTATGGAG............................................................... 22 1 1 4679.00 4679 1974 1567 95 529 397 117
.........................................................................................................TTGTATGTAAAGAAGTATGGAG............................................................... 22 2 1 4321.00 4321 0 0 4317 3 0 1
........................................................................................................CTGGAATGTAAAGAAGTATGGAG............................................................... 23 1 1 4183.00 4183 1407 1195 642 518 301 120
.........................................................................................................TTGAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 3812.00 3812 16 57 3737 2 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGGAGC.............................................................. 23 0 1 3648.00 3648 462 276 2494 291 102 23
.........................................................................................................TGGAATGTAAAGAAGTATGTAG............................................................... 22 1 1 3236.00 3236 522 1051 89 338 809 427
.........................................................................................................TGGAATGTAAAGAAGCATGGAG............................................................... 22 1 1 3141.00 3141 582 478 1011 493 438 139
..........................................................................................................GGAATGTAAAGAAGTATGGAGT.............................................................. 22 1 1 3001.00 3001 2815 118 54 6 7 1
..........................................................................................................TGAATGTAAAGAAGTATGGAG............................................................... 21 1 1 2759.00 2759 612 1018 1067 21 34 7
.........................................................................................................TGGAATGTAAAGAAGTATTGAG............................................................... 22 1 1 2750.00 2750 554 1040 164 415 127 450
.........................................................................................................TGGAATGTAAAGAGGTATGGAG............................................................... 22 1 1 2683.00 2683 1004 736 168 443 245 87
.........................................................................................................TGGAATGTAAAGAAGAATGGAG............................................................... 22 1 1 2554.00 2554 824 96 829 396 367 42
.........................................................................................................TGGAATGTAAATAAGTATGGAG............................................................... 22 1 1 2537.00 2537 1670 586 89 72 79 41
.........................................................................................................TGTAATGTAAAGAAGTATGGAG............................................................... 22 1 1 2477.00 2477 1143 857 406 26 25 20
.........................................................................................................TGGAGTGTAAAGAAGTATGGAG............................................................... 22 1 1 2400.00 2400 825 625 130 453 260 107
.........................................................................................................TTGAATGTAAAGAAGTATGGAC............................................................... 22 2 1 2357.00 2357 1 1 2355 0 0 0
.........................................................................................................TGGAATGTAAACAAGTATGGAG............................................................... 22 1 1 2293.00 2293 1945 96 76 69 73 34
.........................................................................................................TCGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 2280.00 2280 427 321 1444 40 30 18
.........................................................................................................TGGGATGTAAAGAAGTATGGAG............................................................... 22 1 1 2280.00 2280 575 556 126 445 399 179
.........................................................................................................TGGAATTTAAAGAAGTATGGAG............................................................... 22 1 1 2224.00 2224 936 611 580 47 27 23
..........................................................................................................GGAATGTAAAGAAGTATGG................................................................. 19 0 1 2175.00 2175 2162 12 0 0 1 0
.........................................................................................................TGGAATGTAAAGAAGTATGGCG............................................................... 22 1 1 2149.00 2149 54 319 1 1132 416 227
.........................................................................................................TGGAATGTAAAGAAGTATGGAT............................................................... 22 1 1 2120.00 2120 791 747 100 179 159 144
.........................................................................................................TGGAATGTAAAGAAGTATGGGG............................................................... 22 1 1 2092.00 2092 647 363 395 391 237 59
.........................................................................................................TGGAATGGAAAGAAGTATGGAG............................................................... 22 1 1 2064.00 2064 141 48 37 917 720 201
..........................................................................................................GGAATGTAAAGAAGTATGGAGA.............................................................. 22 1 1 1995.00 1995 1977 13 5 0 0 0
.........................................................................................................TGGAATGTAACGAAGTATGGAG............................................................... 22 1 1 1981.00 1981 86 126 1147 368 128 126
.........................................................................................................TGGAATGTAAAGAAGGATGGAG............................................................... 22 1 1 1967.00 1967 642 62 651 316 208 88
.........................................................................................................CGGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 1900.00 1900 558 487 334 271 180 70
.........................................................................................................TGGAATGTAGAGAAGTATGGAG............................................................... 22 1 1 1839.00 1839 555 571 70 356 196 91
.........................................................................................................TAGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 1819.00 1819 193 252 879 293 88 114
.........................................................................................................TGGAATGTAAAGAATTATGGAG............................................................... 22 1 1 1744.00 1744 1206 295 66 64 86 27
.........................................................................................................TTGAATGTAAAGAAGTATGGA................................................................ 21 1 1 1683.00 1683 124 91 1459 1 5 3
.........................................................................................................TTCAATGTAAAGAAGTATGGAG............................................................... 22 2 1 1598.00 1598 1 0 1596 0 0 1
.........................................................................................................TGGAATGCAAAGAAGTATGGAG............................................................... 22 1 1 1583.00 1583 395 335 305 264 223 61
..................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................... 22 0 1 1535.00 1535 501 1 1017 14 1 1
.........................................................................................................TGGAATGTAAAGAAGTATAGAG............................................................... 22 1 1 1503.00 1503 192 397 58 514 163 179
.........................................................................................................TGGAATGTAAAGAAGTGTGGAG............................................................... 22 1 1 1414.00 1414 434 353 127 297 159 44
.........................................................................................................TGGAATGTAAAGAAGTATGCAG............................................................... 22 1 1 1403.00 1403 169 473 18 165 473 105
.........................................................................................................TGGAATGTAAAGCAGTATGGAG............................................................... 22 1 1 1362.00 1362 41 78 608 369 115 151
.........................................................................................................TGGCATGTAAAGAAGTATGGAG............................................................... 22 1 1 1357.00 1357 55 311 5 354 315 317
.........................................................................................................TGGAACGTAAAGAAGTATGGAG............................................................... 22 1 1 1299.00 1299 290 222 71 407 159 150
.........................................................................................................TGGAATGTAAAGAAGTATGGTG............................................................... 22 1 1 1209.00 1209 60 96 13 327 553 160
.........................................................................................................TGGAATGTAAAGAAGTATGGAGTT............................................................. 24 2 1 1203.00 1203 283 433 402 54 26 5
.........................................................................................................TGGAATGTAAAGGAGTATGGAG............................................................... 22 1 1 1201.00 1201 387 238 53 289 169 65
.........................................................................................................TGGAATGTGAAGAAGTATGGAG............................................................... 22 1 1 1195.00 1195 296 339 69 297 133 61
.........................................................................................................TGGAATGTAAAGTAGTATGGAG............................................................... 22 1 1 1156.00 1156 57 59 19 669 194 158
.........................................................................................................TGGAATGTAAAGAAGTACGGAG............................................................... 22 1 1 1107.00 1107 309 270 60 269 152 47
.........................................................................................................TGGTATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 1085.00 1085 1 11 1065 3 4 1
.........................................................................................................TGGAATGTAAAGAAGTATGAAG............................................................... 22 1 1 1084.00 1084 155 456 104 144 172 53
..........................................................................................................GGAATGTAAAGGAGTATGGAG............................................................... 21 1 1 1082.00 1082 1082 0 0 0 0 0
.........................................................................................................TGGAATATAAAGAAGTATGGAG............................................................... 22 1 1 1069.00 1069 310 390 132 141 64 32
.........................................................................................................TGGAATGTAAAGAAGTATCGAG............................................................... 22 1 1 1061.00 1061 238 430 40 120 173 60
........................................................................................................TTGGAATGTAAAGAAGTATGGAG............................................................... 23 1 1 1001.00 1001 981 11 4 1 3 1
.........................................................................................................GGGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 956.00 956 460 86 308 45 44 13
.........................................................................................................TTAAATGTAAAGAAGTATGGAG............................................................... 22 2 1 951.00 951 0 0 950 0 0 1
.........................................................................................................TGGAAGGTAAAGAAGTATGGAG............................................................... 22 1 1 911.00 911 29 20 454 143 222 43
.........................................................................................................TGGAATGTAAAGAACTATGGAG............................................................... 22 1 1 893.00 893 404 224 78 65 88 34
.........................................................................................................TGGATTGTAAAGAAGTATGGAG............................................................... 22 1 1 885.00 885 72 74 536 142 47 14
.........................................................................................................TGGAATGAAAAGAAGTATGGAG............................................................... 22 1 1 859.00 859 333 149 225 40 99 13
........................................................................................................ATGGAATGTAAAGAAGTATGGAG............................................................... 23 0 1 809.00 809 773 7 13 7 4 5
.........................................................................................................TGGAATGTAAAGAAGTATGGAGG.............................................................. 23 1 1 788.00 788 665 41 68 8 5 1
.........................................................................................................TGGAATGTAAAGAAGTATGAG................................................................ 21 2 1 758.00 758 165 505 44 14 23 7
.........................................................................................................AGGAATGTAAAGAAGTATGGAG............................................................... 22 1 1 738.00 738 355 74 175 64 52 18
.........................................................................................................TGGAATGTAAAGACGTATGGAG............................................................... 22 1 1 733.00 733 38 65 4 298 180 148
.........................................................................................................TTGAATGTAAAGAAGTATGGAGC.............................................................. 23 1 1 722.00 722 0 0 722 0 0 0
.........................................................................................................TTGAATGTAAAGAAGTATGGAGA.............................................................. 23 2 1 714.00 714 14 27 672 1 0 0
.........................................................................................................TGGAATCTAAAGAAGTATGGAG............................................................... 22 1 1 688.00 688 272 265 49 38 50 14
.........................................................................................................TGGAATGTAAAGAAATATGGAG............................................................... 22 1 1 685.00 685 362 121 45 90 36 31
.........................................................................................................TGGAATGTAAAGAAGTCTGGAG............................................................... 22 1 1 655.00 655 14 43 5 281 143 169
.........................................................................................................TGGTATGTAAAGAAGTATGGAC............................................................... 22 2 1 648.00 648 0 0 646 0 2 0
.........................................................................................................TTGAATGTAACGAAGTATGGAG............................................................... 22 2 1 626.00 626 0 0 622 4 0 0
...........................................................................................................GAATGTAAAGAAGTATGGA................................................................ 19 0 1 605.00 605 569 34 1 0 1 0
.........................................................................................................TGGAATGTACAGAAGTATGGAG............................................................... 22 1 1 594.00 594 32 66 12 256 92 136
............................................................................................................AATGTAAAGAAGTATGGAG............................................................... 19 0 1 591.00 591 507 50 19 7 6 2
.............................................................................................................ATGTAAAGAAGTATGGAG............................................................... 18 0 1 591.00 591 430 113 30 9 7 2
.........................................................................................................TGGAATGTAAAGAAGTATGGG................................................................ 21 1 1 575.00 575 78 39 431 3 14 10
.........................................................................................................TGGAATGTAAAGAAGTATGGAGAA............................................................. 24 2 1 538.00 538 305 183 18 0 20 12
........................................................................................................GTGGAATGTAAAGAAGTATGGAG............................................................... 23 1 1 522.00 522 513 1 3 4 1 0
.........................................................................................................TGGACTGTAAAGAAGTATGGAG............................................................... 22 1 1 465.00 465 25 106 6 154 112 62
.........................................................................................................TTGAATGTAAAGAAGTATGG................................................................. 20 1 1 463.00 463 16 29 418 0 0 0
.........................................................................................................TGGAATGTAAAAAAGTATGGA................................................................ 21 1 1 445.00 445 426 15 1 0 0 3
.........................................................................................................TGGAATGTAAAGAAGTAGGGAG............................................................... 22 1 1 427.00 427 34 45 52 126 132 38
..........................................................................................................GGAATGTAAAGAAGTATGGAA............................................................... 21 1 1 405.00 405 405 0 0 0 0 0
.........................................................................................................TGGTATGTAAAGAAGTATGGA................................................................ 21 1 1 398.00 398 4 17 350 0 21 6
.........................................................................................................TGCTATGTAAAGAAGTATGGAG............................................................... 22 2 1 395.00 395 0 0 394 0 1 0
...........................................................................................................TAATGTAAAGAAGTATGGAG............................................................... 20 1 1 389.00 389 73 163 150 1 1 1
.........................................................................................................TGGAATGTATAGAAGTATGGAG............................................................... 22 1 1 377.00 377 31 49 69 134 68 26
.........................................................................................................TGGAATGTAATGAAGTATGGAG............................................................... 22 1 1 370.00 370 103 102 7 85 64 9
.........................................................................................................TGCAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 366.00 366 2 11 353 0 0 0
.........................................................................................................TGGAATGTAAAGATGTATGGAG............................................................... 22 1 1 360.00 360 66 82 46 102 55 9
........................................................................................................CTGGAATGTAAAGAAGTATGGA................................................................ 22 1 1 348.00 348 146 102 9 2 71 18
.........................................................................................................GTGAATGTAAAGAAGTATGGAG............................................................... 22 2 1 343.00 343 1 1 341 0 0 0
..........................................................................................................TTAATGTAAAGAAGTATGGAG............................................................... 21 2 1 340.00 340 44 2 294 0 0 0
.........................................................................................................TGGAATGTCAAGAAGTATGGAG............................................................... 22 1 1 326.00 326 13 55 33 142 49 34
.........................................................................................................TTGAATGTAAAGAAGCATGGAG............................................................... 22 2 1 325.00 325 1 1 320 1 1 1
.........................................................................................................TGGAATGTAAAGAAGTAAGGAG............................................................... 22 1 1 318.00 318 97 80 26 69 37 9
.........................................................................................................TGGAATGTAGGGAAGTATGGAG............................................................... 22 2 1 309.00 309 91 199 0 1 13 5
.........................................................................................................TGGAATGTAAAGAAGTATGGAAA.............................................................. 23 2 1 305.00 305 167 117 1 0 15 5
.........................................................................................................TGGAATGTAAAGAAGTATGGAGTA............................................................. 24 2 1 300.00 300 101 168 15 2 13 1
..........................................................................................................GGAATGTAAAGAAGTATG.................................................................. 18 0 1 296.00 296 295 1 0 0 0 0
.........................................................................................................TGCAATGTAAAGAAGTATGGAC............................................................... 22 2 1 290.00 290 0 0 289 0 0 1
.........................................................................................................TGGAATGTAAGGAAGTATGGA................................................................ 21 1 1 289.00 289 175 76 0 0 30 8
.........................................................................................................CTGAATGTAAAGAAGTATGGAG............................................................... 22 2 1 286.00 286 3 3 273 4 2 1
.........................................................................................................TTGAATTTAAAGAAGTATGGAG............................................................... 22 2 1 274.00 274 31 3 235 4 0 1
.......................................................................................................TCTGGAATGTAAAGAAGTATGGAG............................................................... 24 1 1 270.00 270 14 118 64 30 35 9
..................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................... 21 0 1 266.00 266 113 0 148 5 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGGT................................................................ 21 1 1 265.00 265 63 140 21 2 32 7
.........................................................................................................TGGAATGTAAAGAAGTAT................................................................... 18 0 1 260.00 260 210 13 4 0 25 8
.........................................................................................................TGGAATGTAAAGAAGTTTGGAG............................................................... 22 1 1 256.00 256 92 76 12 45 20 11
.........................................................................................................TGGAATGTTAAGAAGTATGGAG............................................................... 22 1 1 250.00 250 28 50 7 122 22 21
.........................................................................................................TTGAATGTAAAGCAGTATGGAG............................................................... 22 2 1 244.00 244 0 0 241 3 0 0
.........................................................................................................TGAAATGTAAAGAAGTATGGA................................................................ 21 1 1 238.00 238 97 71 62 0 6 2
.........................................................................................................TTGAATGTAAAGAAGAATGGAG............................................................... 22 2 1 235.00 235 1 0 228 4 1 1
.........................................................................................................TGGAATGTAAATAAGTATGGA................................................................ 21 1 1 233.00 233 182 43 1 0 3 4
.........................................................................................................TTGAATGTAAAGAAGGATGGAG............................................................... 22 2 1 216.00 216 1 0 211 2 1 1
.........................................................................................................TGTAATGTAAAGAAGTATGGA................................................................ 21 1 1 210.00 210 114 73 16 0 4 3
.........................................................................................................TGCAATGTAAAGAAGTATGGA................................................................ 21 1 1 206.00 206 52 20 132 0 2 0
.........................................................................................................TGGAATGTAAACAAGTATGGA................................................................ 21 1 1 198.00 198 180 7 1 0 4 6
.........................................................................................................TGGTATGGAAAGAAGTATGGAG............................................................... 22 2 1 196.00 196 0 0 3 49 125 19
..........................................................................................................GGAATGTAAAGCAGTATGGAG............................................................... 21 1 1 196.00 196 196 0 0 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGGAGTTT............................................................ 25 3 1 195.00 195 56 111 17 2 6 3
.........................................................................................................TGAAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 194.00 194 19 42 128 2 1 2
.........................................................................................................TGGAATGGAAAGAAGTGTGGAG............................................................... 22 2 1 189.00 189 0 0 1 178 6 4
.........................................................................................................TGGAATGTAAAGAATTATGGA................................................................ 21 1 1 187.00 187 141 29 8 0 5 4
.........................................................................................................ATGAATGTAAAGAAGTATGGAG............................................................... 22 2 1 186.00 186 2 0 183 1 0 0
.........................................................................................................TGGTATGTAAAGAAGTATGGAGC.............................................................. 23 1 1 185.00 185 0 0 182 3 0 0
.........................................................................................................TGGTATTTAAAGAAGTATGGAG............................................................... 22 2 1 180.00 180 0 0 180 0 0 0
.........................................................................................................TGGTATGTAAAGAAGTATGGAGA.............................................................. 23 2 1 180.00 180 0 6 170 1 3 0
...........................................................................................................AAATGTAAAGAAGTATGGAG............................................................... 20 1 1 176.00 176 4 48 124 0 0 0
..........................................................................................................GGAATGTAAGGAAGTATGGAG............................................................... 21 1 1 172.00 172 170 2 0 0 0 0
.........................................................................................................TGGAATGTAAAGAGGTATGGA................................................................ 21 1 1 171.00 171 99 47 3 0 16 6
..........................................................................................................CGAATGTAAAGAAGTATGGAG............................................................... 21 1 1 168.00 168 41 88 34 0 3 2
.........................................................................................................TGGAATTTAAAGAAGTATGGA................................................................ 21 1 1 164.00 164 95 51 14 0 3 1
..........................................................................................................TGAATGTAAAGAAGTATGGA................................................................ 20 1 1 160.00 160 51 86 21 0 2 0
...........................................................................................................GAATGTAAAGAAGTATGGAGT.............................................................. 21 1 1 155.00 155 102 30 21 1 1 0
.........................................................................................................TTTAATGTAAAGAAGTATGGAG............................................................... 22 2 1 150.00 150 2 1 142 1 1 3
.........................................................................................................TGGAGTGTAAAGAAGTATGGA................................................................ 21 1 1 148.00 148 74 37 2 0 26 9
..........................................................................................................GTAATGTAAAGAAGTATGGAG............................................................... 21 1 1 148.00 148 107 2 39 0 0 0
.........................................................................................................TGGAATGTAAAGAAGAATGGA................................................................ 21 1 1 143.00 143 69 12 16 1 44 1
.........................................................................................................TGGAATGTAAAGAAGCATGGA................................................................ 21 1 1 141.00 141 56 30 20 0 29 6
.........................................................................................................TTGATTGTAAAGAAGTATGGAG............................................................... 22 2 1 140.00 140 0 0 140 0 0 0
.........................................................................................................TGGAATGTAAAGTAGTATGGTG............................................................... 22 2 1 138.00 138 0 0 0 15 68 55
...........................................................................................................GAATGTAAAGAAGTATGGAGA.............................................................. 21 1 1 136.00 136 67 56 6 3 2 2
.........................................................................................................TGAAATGTAAAGAAGTATGGAC............................................................... 22 2 1 135.00 135 0 0 133 1 1 0
..........................................................................................................GGAATGTAAAGTAGTATGGAG............................................................... 21 1 1 134.00 134 133 0 0 0 1 0
.........................................................................................................TGGGATGTAAAGAAGTATGGA................................................................ 21 1 1 132.00 132 67 33 4 3 19 6
.........................................................................................................TGGTATGGAAAGAAGAATGGAG............................................................... 22 3 1 130.00 130 0 0 0 17 101 12
..........................................................................................................GGAATGTAAAGAAGAATGGAG............................................................... 21 1 1 130.00 130 130 0 0 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTATTGA................................................................ 21 1 1 130.00 130 52 55 4 1 4 14
.........................................................................................................TGGTATGTAAAGAAGAATGGAG............................................................... 22 2 1 126.00 126 0 1 50 10 55 10
..........................................................................................................GGAATTTAAAGAAGTATGGAG............................................................... 21 1 1 124.00 124 121 0 2 1 0 0
..........................................................................................................GGAATGTAAAGAATTATGGAG............................................................... 21 1 1 123.00 123 123 0 0 0 0 0
.........................................................................................................TGGCATGGAAAGAAGTATGGAG............................................................... 22 2 1 122.00 122 0 0 0 50 43 29
.........................................................................................................TGGAATGTAACGAAGTATGGAGT.............................................................. 23 2 1 120.00 120 3 11 95 3 4 4
.........................................................................................................TTGAATGAAAAGAAGTATGGAG............................................................... 22 2 1 117.00 117 1 0 116 0 0 0
.........................................................................................................TGGAATGTAAAGAAGCATGGAGT.............................................................. 23 2 1 116.00 116 9 16 76 7 6 2
.........................................................................................................TGGAATGTAGAGAAGTATGGA................................................................ 21 1 1 115.00 115 58 36 2 1 13 5
.........................................................................................................CGGAATGTAAAGAAGTATGGA................................................................ 21 1 1 115.00 115 55 35 8 1 13 3
.........................................................................................................TGGTTTGTAAAGAAGTATGGAG............................................................... 22 2 1 112.00 112 0 0 98 7 5 2
.........................................................................................................TCGAATGTAAAGAAGTATGGA................................................................ 21 1 1 111.00 111 49 22 35 0 3 2
.........................................................................................................TGGCATGTAAAGAAGTATGGTG............................................................... 22 2 1 111.00 111 1 1 0 18 55 36
.........................................................................................................TGGTATGTAAAGAAGTATGG................................................................. 20 1 1 111.00 111 1 1 107 0 2 0
..........................................................................................................GGAATGTAAAGAGGTATGGAG............................................................... 21 1 1 110.00 110 110 0 0 0 0 0
.........................................................................................................TTGAATGCAAAGAAGTATGGAG............................................................... 22 2 1 109.00 109 0 0 108 1 0 0
..........................................................................................................GAAATGTAAAGAAGTATGGAG............................................................... 21 1 1 106.00 106 94 2 10 0 0 0
........................................................................................................ATGGAATGTAAAGAAGTATGGA................................................................ 22 0 1 105.00 105 92 7 4 0 2 0
.........................................................................................................TGGAATGTAAAGAAGGATGGA................................................................ 21 1 1 104.00 104 67 5 10 0 17 5
.........................................................................................................TGGAAGGTAAAGTAGTATGGAG............................................................... 22 2 1 104.00 104 0 0 0 32 52 20
.........................................................................................................TGGAAAGTAAAGAAGTATGGAG............................................................... 22 1 1 100.00 100 31 15 20 16 16 2
.........................................................................................................TTGAATGTAAAGAAGTATGGAGTT............................................................. 24 3 1 100.00 100 0 1 99 0 0 0
........................................................................................................CTGGAATGTAAAGAAGTATGGAGT.............................................................. 24 2 1 99.00 99 25 14 38 19 3 0
........................................................................................................TTGGAATGTAAAGAAGTATGGA................................................................ 22 1 1 98.00 98 96 2 0 0 0 0
...................................................................CATGCTTCCTTGCATTCAATA...................................................................................................... 21 0 1 98.00 98 44 0 52 2 0 0
..........................................................................................................TGAATGTAAAGAAGTATGGAGT.............................................................. 22 2 1 96.00 96 7 43 46 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGTA................................................................ 21 1 1 95.00 95 32 32 2 0 15 14
..........................................................................................................GGAATGTAAAGGAGTATGGA................................................................ 20 1 1 95.00 95 95 0 0 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTGTGGA................................................................ 21 1 1 94.00 94 47 26 4 2 12 3
.........................................................................................................TGGAATGTAAAGAAGTATGGAGAT............................................................. 24 2 1 94.00 94 43 35 10 1 3 2
.........................................................................................................TTCAATGTAAAGAAGTATGGAGT.............................................................. 23 3 1 93.00 93 0 0 93 0 0 0
.........................................................................................................TGGAAGGGAAAGAAGTATGGAG............................................................... 22 2 1 93.00 93 0 0 0 5 69 19
.........................................................................................................TGGAATGGAAAGAAGAATGGAG............................................................... 22 2 1 91.00 91 0 1 0 7 73 10
.........................................................................................................TGGAATGCAAAGAAGTATGGA................................................................ 21 1 1 91.00 91 45 20 5 0 15 6
..........................................................................................................GGAATGTAAAGAAGGATGGAG............................................................... 21 1 1 89.00 89 86 0 2 1 0 0
.........................................................................................................TGGAATGGAAAGATGTATGGAG............................................................... 22 2 1 89.00 89 0 0 0 60 28 1
.........................................................................................................TTGTATGTAAAGAAGTATGGAGT.............................................................. 23 3 3 88.00 264 0 0 264 0 0 0
..........................................................................................................TAAATGTAAAGAAGTATGGAG............................................................... 21 2 1 87.00 87 0 21 66 0 0 0
.........................................................................................................TGCAATGTAAAGAAGTATGGAGC.............................................................. 23 1 1 87.00 87 0 0 87 0 0 0
.........................................................................................................TGGAATGTAAAGAAGAATGGAGT.............................................................. 23 2 1 86.00 86 12 4 58 6 6 0
.........................................................................................................TGGAATGTAAAGAAGTATGGC................................................................ 21 1 1 85.00 85 44 7 6 0 19 9
.........................................................................................................TCGAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 85.00 85 6 18 61 0 0 0
.........................................................................................................TGGAATGGAAAGTAGTATGGAG............................................................... 22 2 1 84.00 84 0 0 0 27 34 23
.........................................................................................................TTGAATGTAAAGAAGTATTGAG............................................................... 22 2 1 83.00 83 2 3 76 0 1 1
.........................................................................................................TGGAATGTAAAGAAGTATGTAT............................................................... 22 2 1 83.00 83 0 1 0 24 34 24
...........................................................................................................GAATGTAAAGAAGTATGG................................................................. 18 0 1 82.00 82 75 6 1 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGGATC.............................................................. 23 1 1 82.00 82 12 2 68 0 0 0
.........................................................................................................TGGAATGTAAAAAAGTATGGAGT.............................................................. 23 2 1 81.00 81 67 9 3 0 2 0
.........................................................................................................TGGAACGTAAAGAAGTATGGA................................................................ 21 1 1 81.00 81 30 23 1 0 15 12
.........................................................................................................TGGCATGTAAAGAAGTATGGA................................................................ 21 1 1 81.00 81 7 20 0 0 36 18
.........................................................................................................TGATATGTAAAGAAGTATGGAG............................................................... 22 2 2 80.50 161 0 0 151 3 2 5
.........................................................................................................TGGAATGTAAAGAACTATGGA................................................................ 21 1 1 80.00 80 46 17 8 0 9 0
..........................................................................................................GGAGTGTAAAGAAGTATGGAG............................................................... 21 1 1 79.00 79 79 0 0 0 0 0
.........................................................................................................TGGGATGGAAAGAAGTATGGAG............................................................... 22 2 1 79.00 79 0 0 0 15 47 17
..........................................................................................................GGGATGTAAAGAAGTATGGAG............................................................... 21 1 1 79.00 79 73 1 0 2 3 0
.........................................................................................................TGGAATGTAAAGAAGTATGA................................................................. 20 1 1 78.00 78 33 19 18 0 8 0
.........................................................................................................TGTAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 78.00 78 19 33 24 1 1 0
..........................................................................................................GGAATGTAAAGAAGCATGGAG............................................................... 21 1 1 78.00 78 75 1 0 2 0 0
.........................................................................................................TGGCATGTAAAGTAGTATGGAG............................................................... 22 2 1 77.00 77 0 0 0 17 25 35
.........................................................................................................TGGAATGGAAAGAAGTATGGTG............................................................... 22 2 2 77.00 154 0 0 0 22 104 28
.........................................................................................................TGGTATGCAAAGAAGTATGGAG............................................................... 22 2 1 77.00 77 0 0 68 5 3 1
........................................................................................................CTGGAATGTAAAGAAGTATGGAGA.............................................................. 24 2 1 76.00 76 12 42 5 7 6 4
.........................................................................................................TGGAATGTAACGCAGTATGGAG............................................................... 22 2 1 76.00 76 0 0 58 8 5 5
..........................................................................................................GGAATGTAAAGAAGTATGGAT............................................................... 21 1 1 76.00 76 75 1 0 0 0 0
.........................................................................................................TGGAATGTAACGAAGTATGGA................................................................ 21 1 1 76.00 76 17 15 27 0 11 6
.........................................................................................................TAGAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 75.00 75 5 8 54 2 2 4
.........................................................................................................TGGAATGTAAAGTAGTATGGA................................................................ 21 1 1 75.00 75 2 5 0 3 45 20
.........................................................................................................TAGAATGTAAAGAAGTATGGA................................................................ 21 1 1 74.00 74 19 14 28 0 7 6
..........................................................................................................GGAATGTAAAGAAGTGTGGAG............................................................... 21 1 1 74.00 74 74 0 0 0 0 0
.........................................................................................................TGGAATGTAAAGGAGTATGGA................................................................ 21 1 1 74.00 74 42 18 0 0 10 4
.........................................................................................................TGGTATGTAAAGAAGTATGTAG............................................................... 22 2 1 74.00 74 0 4 19 12 29 10
..........................................................................................................GGAATGTAAAGAAGTATTGAG............................................................... 21 1 1 74.00 74 70 2 0 0 1 1
.........................................................................................................TGGCATGTAAAGAAGTATGGCG............................................................... 22 2 1 73.00 73 0 2 0 35 20 16
.........................................................................................................TGGAATGTAAAGAAGTATGCTG............................................................... 22 2 1 73.00 73 0 4 0 12 52 5
.........................................................................................................TGGAATTTAAAGAAGTATGGAGT.............................................................. 23 2 1 72.00 72 13 24 35 0 0 0
.........................................................................................................TGGAATGGAAAGAAGTATGGA................................................................ 21 1 1 72.00 72 18 3 0 0 39 12
.........................................................................................................TGGCATGTAAAGTAGTATGGTG............................................................... 22 3 1 72.00 72 0 0 0 4 31 37
........................................................................................................CGGGAATGTAAAGAAGTATGGAG............................................................... 23 2 1 72.00 72 0 0 72 0 0 0
.........................................................................................................TGGTATGTAAAGAAGCATGGAG............................................................... 22 2 1 71.00 71 0 0 60 8 3 0
.....................................................................................................GATCTGGAATGTAAAGAAGTATGGAG............................................................... 26 2 1 70.00 70 0 19 32 18 1 0
..........................................................................................................GGAATGTAAAGAAGTATGGAGC.............................................................. 22 0 1 70.00 70 53 1 16 0 0 0
.........................................................................................................TGGAATGTAAAGAAGCATGTAG............................................................... 22 2 1 70.00 70 0 0 1 12 43 14
..........................................................................................................GGAATGTAAAGAAGTATGGAGG.............................................................. 22 1 1 69.00 69 69 0 0 0 0 0
.........................................................................................................TGGAATGTAAAGAAGTATGGGGT.............................................................. 23 2 1 69.00 69 10 22 28 3 4 2
.........................................................................................................TTGAATGTAAAGAAGTATGGGG............................................................... 22 2 1 69.00 69 0 0 68 0 1 0
......................................................................................................ATCTGGAATGTAAAGAAGTATGGAG............................................................... 25 1 1 69.00 69 5 24 22 9 8 1
.........................................................................................................TGGAATGTGAAGAAGTATGGA................................................................ 21 1 1 68.00 68 33 21 1 0 10 3
.........................................................................................................TGGAATGTAAAGAGGTATGGAGT.............................................................. 23 2 1 68.00 68 17 29 12 4 4 2
.........................................................................................................TGGAATGGAAAGAAGGATGGAG............................................................... 22 2 1 68.00 68 2 0 1 40 19 6
.........................................................................................................TGGAATGTAAAGAAGTATGGAGTTA............................................................ 25 2 1 68.00 68 22 43 1 0 1 1
.........................................................................................................TGGAATGTAAGGAAGTATGGAGT.............................................................. 23 2 1 67.00 67 19 35 4 5 4 0
.........................................................................................................TGCAATGTAACGAAGTATGGAG............................................................... 22 2 1 67.00 67 0 0 66 0 1 0
.........................................................................................................TGGAATGTAAAGAAGTATC.................................................................. 19 1 1 67.00 67 3 0 64 0 0 0
...........................................................................................................GAATGTAAAGAAGTATGGAGTT............................................................. 22 2 1 66.00 66 8 50 8 0 0 0
.........................................................................................................TGGCATGTAAAGAAGCATGGAG............................................................... 22 2 1 65.00 65 1 3 0 8 33 20
.........................................................................................................TTGAATGTAAAGAAGTATGGG................................................................ 21 2 2 65.00 130 0 0 130 0 0 0
............................................................................................................AATGTAAAGAAGTATGGA................................................................ 18 0 1 64.00 64 56 5 1 0 2 0
.........................................................................................................TGGAATGTAAAGAAGTATAGA................................................................ 21 1 1 64.00 64 22 21 2 1 11 7
.........................................................................................................TGCAATGTAAAGAAGTATGGAGA.............................................................. 23 2 1 64.00 64 6 2 56 0 0 0
..........................................................................................................GGAATGTAAATAAGTATGGAG............................................................... 21 1 1 63.00 63 63 0 0 0 0 0
.........................................................................................................TGGAGTGTAAAGAAGTATGGAGT.............................................................. 23 2 1 63.00 63 10 35 10 5 3 0
.........................................................................................................TCGAATGTAAAGAAGTATGGAC............................................................... 22 2 1 62.00 62 0 0 61 1 0 0
.........................................................................................................TGGTATGGAAAGGAGTATGGAG............................................................... 22 3 1 62.00 62 0 0 0 37 12 13
.........................................................................................................TTGAATGTAAAGAGGTATGGAG............................................................... 22 2 1 62.00 62 1 0 59 0 2 0
.........................................................................................................TGGAATGTAAAGAAGGATGGAGT.............................................................. 23 2 1 61.00 61 5 4 44 4 3 1
.........................................................................................................TGGAATGTAAAGAAGTACGGA................................................................ 21 1 1 61.00 61 25 18 3 0 13 2
.........................................................................................................TGGGATGTAAAGAAGGATGGAG............................................................... 22 2 1 61.00 61 0 0 0 32 15 14
.........................................................................................................GGGAATGTAAAGAAGTATGGA................................................................ 21 1 1 61.00 61 43 6 7 0 2 3
..........................................................................................................GGAATGTAAAGAAGTATGGGG............................................................... 21 1 1 60.00 60 57 0 1 2 0 0
.........................................................................................................TGGAATGTAAAGAAGCATGGTG............................................................... 22 2 1 59.00 59 0 0 0 9 38 12
.........................................................................................................TGGAATGTAACGAAGTATGGCG............................................................... 22 2 1 59.00 59 0 0 0 42 6 11
.........................................................................................................TGGAATGTAACGACGTATGGAG............................................................... 22 2 1 59.00 59 0 0 0 49 3 7
.........................................................................................................TGGAATGTAAAGAAGTATGAA................................................................ 21 1 1 58.00 58 27 17 4 2 5 3
.........................................................................................................TGGAATGTAAAGAAATATGGA................................................................ 21 1 1 58.00 58 37 10 3 1 2 5
.........................................................................................................TGGAATGTAAAGACGTATGGA................................................................ 21 1 1 57.00 57 2 16 1 0 23 15
.........................................................................................................TGGAATGTAAAGAAGTCTGGCG............................................................... 22 2 1 57.00 57 0 0 0 32 13 12
.........................................................................................................TGGAATATAAAGAAGTATGGA................................................................ 21 1 1 57.00 57 34 18 3 0 2 0
.........................................................................................................TGGAATGTAAAGAAGAATGTAG............................................................... 22 2 1 57.00 57 1 0 0 18 30 8
.........................................................................................................TGGAATGTAAAGAAGTATTGAGT.............................................................. 23 2 1 57.00 57 6 39 11 0 0 1
.........................................................................................................TGGTATGTAAAGAAGGATGGAG............................................................... 22 2 1 56.00 56 0 0 44 6 4 2
.........................................................................................................TGGAATGGAAAGATGTGTGGAG............................................................... 22 3 2 55.00 110 0 0 0 98 12 0
........................................................................................................GTGGAATGTAAAGAAGTATGGA................................................................ 22 1 1 55.00 55 52 3 0 0 0 0
.........................................................................................................TGGGATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 55.00 55 3 23 13 3 11 2
.........................................................................................................TGGAATGTAAAGAAGTATGTAGT.............................................................. 23 2 1 55.00 55 7 37 5 2 2 2
.........................................................................................................TGCAATGTAAAGAAGTATGG................................................................. 20 1 1 54.00 54 3 3 48 0 0 0
.........................................................................................................TTGAATGTATAGAAGTATGGAG............................................................... 22 2 1 54.00 54 0 0 54 0 0 0
.........................................................................................................AGGAATGTAAAGAAGTATGGA................................................................ 21 1 1 54.00 54 39 4 3 0 5 3
.........................................................................................................TGGAATGTAAAGTAGAATGGAG............................................................... 22 2 1 54.00 54 0 0 0 50 4 0
.........................................................................................................TGGCATGTAAAGCAGTATGGAG............................................................... 22 2 1 54.00 54 0 0 0 29 15 10
.........................................................................................................TGGAATGTAAAAAAGTATGG................................................................. 20 1 1 54.00 54 52 2 0 0 0 0
.........................................................................................................TTGAATATAAAGAAGTATGGAG............................................................... 22 2 1 53.00 53 1 2 49 1 0 0
.........................................................................................................TGGAATGTAAAAAAGTATGGAGA.............................................................. 23 2 1 53.00 53 47 3 1 0 2 0
.........................................................................................................TGGAATGTAAAGAAGTAAGGA................................................................ 21 1 1 53.00 53 8 3 39 0 2 1
.........................................................................................................CGGAATGTAAAGAAGTATGGAGT.............................................................. 23 2 1 52.00 52 13 17 20 2 0 0
.........................................................................................................TTGTATGTAAAGAAGTATGGAGC.............................................................. 23 2 1 52.00 52 0 0 52 0 0 0
.........................................................................................................TGGAATGGAAAGAAGTAGGGAG............................................................... 22 2 1 52.00 52 0 0 0 11 27 14

Anti-sense strand reads

TGTAATTTCGGTTCTCACATACCGGGTGTTTACCCAGAATTTAACAAGTAACGCGGAAACTCTCAAGGTACGAAGGAACGTAAGTTATCATAAATATATTCGTATACCTTACATTTCTTCATACCTCGCTTTAGACCGCTTCGTAGTATGGTTTGACATTTTTTTTTGTGTAATACTTTAACACAAATTT

************************************************.((((.......((((((((((((.((((((((.(((((..........)).))).)))))))).)))))))))))).......))))...*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 V056

head

 V041

embryo

 V049

head

 M046

female body

 V110

male body
.................................................................AGGTACGAAGAAATGTAAGTT........................................................................................................ 21 2 2 4.00 8 7 0 0 0 1 0
................................................................CAGGTACGAAGAAATGTAAGTT........................................................................................................ 22 3 2 2.00 4 4 0 0 0 0 0
................................................................GAGGTACGAAGCAATGTAAGTT........................................................................................................ 22 3 2 1.50 3 3 0 0 0 0 0
..................................................................GGTACGAAGAAATGTAAGTT........................................................................................................ 20 2 2 1.50 3 3 0 0 0 0 0
................................................................CAGGTATGAAGAAACGTAAGTT........................................................................................................ 22 3 2 1.00 2 2 0 0 0 0 0
................................................................GAGGTATGAAGCAACGTAAGTT........................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0
................................................................AAGGCACGAAGAAACGTAAGGT........................................................................................................ 22 3 2 0.50 1 0 0 1 0 0 0
.................................................................AGGTACGAAGCAACGTAAGGT........................................................................................................ 21 2 2 0.50 1 0 0 0 1 0 0
................................................................CAGGTATGAAGGAATGTAAGTT........................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0
..................................................................GGTATGAAGGAATGTAAGTT........................................................................................................ 20 2 2 0.50 1 1 0 0 0 0 0
.................................................................AGGTATGAAGAAACGTAAGTT........................................................................................................ 21 2 2 0.50 1 0 0 0 0 0 1
................................................................GAGGTAGGAAGGAACGTAAGGT........................................................................................................ 22 3 5 0.40 2 0 2 0 0 0 0
........................................................................................................................................................................TGTAATAGGTTAACACAACTT. 21 3 20 0.35 7 0 0 0 0 6 1
....................................................................................................................................AGACCGTTTCGTAGTAGAGTT..................................... 21 3 3 0.33 1 0 0 0 1 0 0
................................................................GAGGTACGAAGCAACGTAAGGT........................................................................................................ 22 3 3 0.33 1 0 0 1 0 0 0
................................................................GAGGTAGGAAGGAATGTAAGTT........................................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0
.................................................................AGGTATGAAGGAACGTAAGGT........................................................................................................ 21 2 3 0.33 1 0 1 0 0 0 0
................................................................GAGGTAAGAAGAAACGTAAGTT........................................................................................................ 22 3 3 0.33 1 1 0 0 0 0 0
..................................................................GGTATGAAGAAACGTAAGTT........................................................................................................ 20 2 3 0.33 1 1 0 0 0 0 0
................................................................AAGGTATGAAGAAAAGTAAGTT........................................................................................................ 22 3 9 0.33 3 3 0 0 0 0 0
................................................................GAGGTACGAAGAAACGTAAGCT........................................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0
................................................................GAGGTATGAAGGAACGTAAGAT........................................................................................................ 22 3 4 0.25 1 0 0 1 0 0 0
................................................................AAGGTATGAAGCAATGTAAGTT........................................................................................................ 22 3 4 0.25 1 1 0 0 0 0 0
................................................................CAGGTACGAAGAAACGTAAGGT........................................................................................................ 22 3 4 0.25 1 0 1 0 0 0 0
................................................................GATGTACGAAGGAACGTAAGGT........................................................................................................ 22 3 5 0.20 1 0 0 0 1 0 0
..........................................................................GGAACGCAAGTTTTCATA.................................................................................................. 18 2 5 0.20 1 0 1 0 0 0 0
.................................................................GGGTACGAAGAAACGTAAGGT........................................................................................................ 21 3 5 0.20 1 0 1 0 0 0 0
................................................................CAGGTAGGAAGGAACGTAAGGT........................................................................................................ 22 3 5 0.20 1 0 1 0 0 0 0
................................................................CAGGTACGAAGAAATGTAAGT......................................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0
................................................................GAGGTACGAAGTAACGTAAGGT........................................................................................................ 22 3 7 0.14 1 0 1 0 0 0 0
.................................................................AGGTATGAAGAAACGTATGTT........................................................................................................ 21 3 10 0.10 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6500:24555136-24555325 + dmo-mir-1 Known_mirbase AC------------------ATTAAA-GCCAAGAGTGTA-T-GG---C-CCA-------------CAAATGGGTCTTAAAT--------------------------TGT--------------TCATT----GCGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATTTAT-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAGCATCATACCAA--AC------------------TGT------AA-AAAAAAACACATT------------------------------A---------TGAA-A----TT-G----TGTTTAAA
droVir3 scaffold_12963:13613388-13613569 - dvi-mir-1 Known_mirbase AT------------------ATTAA-AGTTAAGAGTG-TGT-GAGTTG-----------------T-AATGGTTTTTAAAT--------------------------TG------------TGCTTACT----TGGCCT-TTGAGAGTTCCATGCTTCCTTACATTCAATAGTATTCAA-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAACATCACAAAA-ACAA---------------------------C---------AA-----------------------TAACAT-----T---------AAGC-AG---T-------CGTTTAAT
droGri2 scaffold_15126:6250367-6250579 + dgr-mir-1 Known_mirbase AC------------------CTT-AAAGTTAAGAGTGTG-----GTTT-----------------T-TATGGTTTTTAAAT--------------------------TGT--------------TTACT----TGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAA-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAACATCATAAAAA--AA------------------TGACAACATA------AAAAATATTATGTGCGTGCCGACAACATAAATTC-----T---------TAGC-------T-G-TTTTACTTAAA
droWil2 scf2_1100000004521:1845896-1846084 + dwi-mir-1 Known_mirbase ACATTATCC---------------AAA--TATA-------T-AG------------------------ATGGTAGATA-------------------------------T---A--TATGTAG-CTACT----TGGCCTCTTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATTAAATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGTCCGACATCATC---TACAA------------------TATAATCTCAA--A-GAAATAAACT-----------------------------------------GCG-AGTGACT-G----TCTATAAA
dp5 4_group3:7845263-7845410 - dps-mir-1 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAACA-TAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACAGCGTC---TACAGTGAAGTGGAAAAACTGAGTGAAAACATA---------------------------------------------------------GC----CTTAAAAC-ACACACTAA
droPer2 scaffold_1:9291962-9292185 - dpe-mir-1 Known_mirbase AAGCCATTC---------------A--GATAAA-GTGAG-T-GAGTG------------------------AGTC--------CCCACCCAGGAGAGGGCTAATAAAAGTCAAA-------GACGGAATCAGAAGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAACA-TAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGCC---TACAGTGAAGTGGAAAAACTGAGTGAAAACATA---------------------------------------------------------GC----CTTAAAAC-ACACACTAA
droAna3 scaffold_12916:6985775-6985972 + dan-mir-1 Known_mirbase T------------------TAG----AATTAATGGTAAA-----GTTTTCCA-AAAAG------------TG-----AC-GA--------------------AAAAATAT--------------CAAGA----GAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAATA-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACTTCAAG-TTT------------AAA-------TTT-----CAAA-AAA---T--------------------------------GGTAAGTTTTAAGAAAAAAATATTT-G----TTTTTAAA
droBip1 scf7180000396566:165960-166133 + T------------------TAC----ACATAAAGGTGTA-----GTGC-CCCAAACAG------------TG-----AAA------------------------AAATAT--------------CAATA----GAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAATA-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGAG-TTTACAT--------------------T-----CAAA-AAA---T------------------------------AAGG--------------------------T-ATGTTTAAA
droKik1 scf7180000302408:678947-679114 + C------------------CACTAAAAGTTAGCTGGC-AGC-GGAAAAT--AAACCAG------------TG-----AAATAAC--------------------------------------CCATTCG----GGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTAAATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAGACATCGAAGTTA--AC------------------TAT------AG-GAAA------------------------------------------------------------------------TAA
droFic1 scf7180000448593:10022-10168 + AAACTGTCC---------------AAAGTTGAACGGGTCGCTGGAAAAT--AAAACAA------------AG-----A-------------------------------------------AACGTAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAACTCATC------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491186:467165-467368 + GAACTGTCCAAGTGAGTGCCACTAAAAGTTAACCGGGGGGT-GAAA---------------------AAAGGAAACGAAAT----------------------------------------AACATAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCTGACATCGAAGTAG--AG------------------TGAAAACATA------------------------------------AAGA-----A---------CGAA-AGTGAA-------TGTCAAAC
droRho1 scf7180000773642:739-869 - ---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAGACATCGCAGCTA--AG------------------TGT------AA-AA------------------------------TAAGAA-----A---------TGAA-AGTGA----------TTAAAA
droBia1 scf7180000302422:7601723-7601925 - AA-CTGTCCCAGTGAGAGCCACCAAAAGTTAACC----CGC-GAGATA-------------------------------------------------------------T---AAACAGGGAGCAGAAT----CGGCCT-GTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATCTAT-TCAAGCCTATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCTTACATCAGTGTTC------------CAA-----------------A-AA-GATACA-----------------------TATTGC-----T---------TACC-AGTGATT-A-TTTTATTCATA
droTak1 scf7180000415115:70145-70311 - C------------------CACTAAAAGTTAACCGGC-GGA-GAAT----------------------TTGGTGGAGAAAT---------------------------ACACAAAACAAGAAACATAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATCTAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAAACATCGAAGATA------------------------------------------------------------------------------------------------------------TCAAA
droEug1 scf7180000409767:814605-814805 - C------------------CACTAAAAGTTAACCGCT-CGC-GGG-------------------------TG-----AA------------------GGAAA-AAAATATGAAAAACAAAGAACTTTAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAG-AAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGAAGTTG------------AAA--------AT----ATA----------------------------------TATAAC-----A---------TAAA-AGTGATTTA-AAATGTTTAAA
dm3 chr2L:20487405-20487568 + dme-mir-1 Known_mirbase GC------------------GTT----------------GT-GGAAAATCCAAAACAA------------AG-----AC-CATC--------------------------------------CCATATT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG------------AAA--------CT-------AA-AAC---T------------------------------GAAA--------------------------T-TTGATTGAA
droSim2 2l:19944051-19944149 + dsi-mir-1 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG-----------------------------------------------------------------------------------------------------------------
droSec2 scaffold_18:365670-365787 + dse-mir-1 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG------------AAA----------------------C---T------------------------------GAAA--------------------------T-TTAATTGAA
droYak3 2R:6842672-6842841 + dya-mir-1 Known_mirbase C------------------CACCAAAACTTAGCCGCGTTGT-GGAAAATCCAAAACAA------------AG-----AA-CATC--------------------------------------CCACCAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGTCATCGGAGTTG------------AAA--------GT------AA-AAGA------------------------------------------------------------------------AAA
droEre2 scaffold_4845:3954248-3954401 - der-mir-1 Known_mirbase C------------------CACCAAAAC---ACCG--------A----------AACCTAGCCGAAACAAGG-------------------------------------------------ACC---TC----CAGCCT-GTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAAAA--------------------------------------T---T------------------------------AAAA--------------------------T-GTAAAGTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AC------------------ATTAAA-GCCAAGAGTGTA-T-GG---C-CCA-------------CAAATGGGTCTTAAAT--------------------------TGT--------------TCATT----GCGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATTTAT-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAGCATCATACCAA--AC------------------TGT------AA-AAAAAAACACATT------------------------------A---------TGAA-A----TT-G----TGTTTAAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2213195614.003195614174696725355552587139201205106798198
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211247608.0024760818066337431789100489649397
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................211197023.001970231961151763180144477
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23176793.007679325860272873021241316832183
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20135553.003555321219303761121146711340
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23135444.0035444171285473481122236813931
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................20119795.001979519750023733
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2219758.009758567140481858266552
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2016719.0067196204691336108289
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2216510.0065103810811123251572025
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1914908.0049082980270194531609
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2313648.003648462291231022494276
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2213001.003001281561754118
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1912175.0021752162001012
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2212120.002120791179144159100747
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2211995.0019951977000513
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................2211535.001535501141110171
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2411203.00120328354526402433
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231809.00809773754137
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231788.007886658156841
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211758.007581651472344505
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191605.00605569001134
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191591.005915077261950
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181591.0059143092730113
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211575.00575783101443139
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241538.005383050122018183
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211405.0040540500000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231305.0030516705151117
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241300.00300101211315168
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181296.0029629500001
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................211266.002661135001480
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211265.0026563273221140
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181260.002602100825413
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251195.001955623617111
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211155.001551021012130
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211136.0013667322656
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221105.001059200247
......................................................................................................................................................CATGCTTCCTTGCATTCAATA...................................................................................................................................................................................21198.009844200520
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................24194.0094431231035
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................21185.008544091967
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18182.00827500016
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................20178.0078330081819
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................21176.00767500001
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................22170.007053000161
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGG..........................................................................................................................................22169.00696900000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATC..............................................................................................................................................19167.00673000640
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................22166.00668000850
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................18164.00645600215
droVir3
AT------------------ATTAA-AGTTAAGAGTG-TGT-GAGTTG-----------------T-AATGGTTTTTAAAT--------------------------TG------------TGCTTACT----TGGCCT-TTGAGAGTTCCATGCTTCCTTACATTCAATAGTATTCAA-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAACATCACAAAA-ACAA---------------------------C---------AA-----------------------TAACAT-----T---------AAGC-AG---T-------CGTTTAATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2214790478.0047904781151381101385431853685211856375505511944467208166010810252560822939810848937146619862914174312155150111259490389540584449855256793735442513146354044252111301112132952181104154631223252418134114111225198408481292449347912672153527251543043252947443520200214738407871483112321151379208719836073128603
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211347794.0034779435959811716313143952513545793809604000337031764991372304519905116369321427120890482416435903596516653341579411527835461175117625223341281020916136254323199840201384433409913657664122702020542548706932
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................211125188.001251882012204916311326635110105031931093982891608184285256463951144905000014000000000000000000010421737800100100100002312
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231113985.0011398512130091632735259889438923532860011457557402589104784986513630538748005899614824813712481191532131513532017325252497617121728649512791112862772074446408723300250211592532423600302038388346324375
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23166931.0066931301425036327149152878473077000601627611181437619872352811885378519494579474355091734670112120111195010101352312155811121066523112457206292981814110000005161183157205
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20148394.004839400180242648635297585143104110700014285401251047627980104917948498661811968248491025020002133700000000011330174303639376417649013481189000000111797163159
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................22117196.00171960038964515532275282092600015096994351077669502465951049132315421823929274218042000044001000000000001011123998804141010311100000021391928
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................20110473.001047300102260030200100036211430281631121010029607010001120000000000000000000081900001000000000111
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2218847.008847004661652445220749000326795520813275658913983775464416331190000060000000000000201224869509540400000200000008326
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1916532.00653200128432381272918528000635372200472313241431792692814612117610125690560000475000000000010000115144281314243127000000014396
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2015466.005466443041831241456423400018264531287947125288201717298260130010213000000000000000200053101125002000610947300000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2214480.0044802112551317272285248000297104351088742256122514342108817080000070010001002120103443136546104200210200000012171
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2413762.00376200324575914021851500052317695350146256912435613713114947215401000112190113223247111431115221521421957644021020000000017235
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2313143.0031430041727517343523100003791706128310715578926400343244782506000108000100210114231422913120932902001100000014301
.............................................................................................................................................................................................TGGAATGTAAAGAAGTA................................................................................................................................................1712264.002264000000000000000000000000000000000000000048101533826306051130846576458281676557010000679000000557423858
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................1811995.00199500176007562000013492071342971621541112917824321301917251160010090000000000000001010029900211000000001020
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1911989.00198900197100000000000000000002000000011000000000000000000000000000031100000000000000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2211619.00161900157200000000000521313039000000010000000000000000000000000000011700000000000000010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................2511592.001592001249220411730002367435160811433751600313285818020000130201022026410594178203131226400000000200000212
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................1811578.00157832185234142869100015391101152779586167223125114503000001000000000000000130012236800000062205301000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2211543.00154300140830002210000228101616111812000001304000000000000000000000000000041100000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................2411528.001528103018320308000018496331044898042128001217831001000000000000001010000213004935900000000000005546
.....................................................................................................................................................CCATGCTTCCTTACATTCAATA...................................................................................................................................................................................2211421.00142123424310100110000001344940429130416085032566225123083511131009000631354319271688920516119063110111105321100
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................1911226.001226383846733903541000966070854331142848310218275905000005000000000000000220020243800010084415401000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................2311102.00110200239003011112000884219692642332710002023280802000006000000000000000000103334600000000000000031
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241959.0095900184620611810009740216732440375500012644300000003000000000010000112022030200000100000000013
.....................................................................................................................................................CCATGCTTCCTTACATTCAAT....................................................................................................................................................................................211918.00918411273300100000001173629569632318778122132013625020511200000003100312120000202001510000000001000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211883.0088300764020858300039221145162702019001114525010000010000000000000000100284648200000000000000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231822.0082200688201001300002112783110227000000203020000000000000000110000000761300000000000001000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211689.006890080337218619200025497922410816010215813000000030000000000000000000210326801000000000001000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231516.0051601325100202181000852411131000121042302000002000000001000000004112197200000000000002210
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211437.00437004290000000000010001200100000001000000000000000000000000000001100000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241410.0041000830020206000034167191015191801011560300010000000000000001100001121214900000000000000012
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191402.00402203281100101000085664202900000061103000002000000000000000010004700000000100000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211393.00393001920454013000214251513115221522001310204000014000000000000000000021463800000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211287.002872258520241309100091623543282000012350100000000000000000002000420313900000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................231259.00259001200000062000232018453240000012100300000000000000000000000122815600000000010000100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCT...........................................................................................................................................221256.00256001001020100000203102300000000000010000000000000000000000000281811200000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATA..........................................................................................................................................231198.001980014000000100003123120250000000020100000100000000000000000004415200000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201153.001530018101000100001203121321000022000000000000000000000000000002721820000000000000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181151.00151001490000000000000000000000000000000000000000000000000000000001100000000000000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211143.0014310602010101000011216101147000002122020000010000000000000000010151600000000000000100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCC...........................................................................................................................................221133.00133000000000000001100014310000000000000000000000000000000000000380300000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201130.001300029202001100007514310200000002010000000100000000000000000201164900000000000000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211109.00109006510001000000531201043000000001000000000000000000000000000071500000000000000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................221106.0010600101100007000016558430516001003104000000000000000000000001000001500000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATT..............................................................................................................................................191106.00106002700601170000631422215011102112000000100000000000000000010062100000000000000000
.....................................................................................................................................................CCATGCTTCCTTACATTCAA.....................................................................................................................................................................................201103.00103101510000000000122221160191100001454400000000000000000010000000000000200000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................231101.0010100710000220000610545012000002213000000010000010000100000001134800000000000000100
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................181101.001010037002020200001105933041000000140003000002000000000000000000003000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTAT........................................................................................................................................25197.00970026000000200007448104012000000011000000000000000000000000000012600000000000000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................22191.009100451000000000054341003510010100100000000000000000000000000115900000000000000000
droGri2
AC------------------CTT-AAAGTTAAGAGTGTG-----GTTT-----------------T-TATGGTTTTTAAAT--------------------------TGT--------------TTACT----TGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAA-ATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAAACATCATAAAAA--AA------------------TGACAACATA------AAAAATATTATGTGCGTGCCGACAACATAAATTC-----T---------TAGC-------T-G-TTTTACTTAAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2211015272.001015272645154370118
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21172469.007246972314155
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................21142096.00420962451617580
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23118497.0018497800910488
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2315980.00598030492931
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................2013777.00377718481929
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2012789.00278927845
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2012129.002129208346
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2211437.001437597840
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................2211381.00138113765
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2211049.001049384665
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................221955.0095594510
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................221909.00909409500
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................191737.00737615122
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................241547.00547223324
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................231470.00470289181
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231435.0043537857
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................221347.003473452
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231346.003463415
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................211332.003323293
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211302.0030226276
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181222.0022217448
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................191192.001921911
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191180.001801728
......................................................................................................................................................CATGCTTCCTTGCATTCAATA...................................................................................................................................................................................211165.001651650
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241103.001034360
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241101.001017922
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................25193.00932865
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................18183.0083794
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................19181.0081774
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................18180.0080791
.....................................................................................................................................................CCATGCTTCCTTGCATTCA......................................................................................................................................................................................19157.0057570
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................21157.0057561
.....................................................................................................................................................CCATGCTTCCTTGCATTCAA.....................................................................................................................................................................................20156.0056560
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAC...........................................................................................................................................21154.0054540
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................23152.00522329
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGG..........................................................................................................................................22150.0050500
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................24148.00482325
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................21142.0042411
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................21136.00361224
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGGC.........................................................................................................................................24136.0036360
......................................................................................................................................................CATGCTTCCTTGCATTCAAT....................................................................................................................................................................................20135.0035350
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................21133.0033303
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................21131.00311417
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTC.........................................................................................................................................24126.0026224
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................22125.0025250
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACT..........................................................................................................................................23124.0024717
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................21123.0023194
.......................................................................................................................................................ATGCTTCCTTGCATTCAATA...................................................................................................................................................................................20123.0023230
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................23120.0020191
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23120.0020713
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................22119.0019154
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................21119.0019613
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTT...........................................................................................................................................22117.0017116
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCA.........................................................................................................................................24116.0016160
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAC.........................................................................................................................................24114.0014140
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACA..........................................................................................................................................23114.001468
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCT.........................................................................................................................................24112.001275
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................18112.0012120
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................20112.001239
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................23112.001248
...........................................................................................................................................................................................TATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................24112.0012120
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAGT..........................................................................................................................................19110.001091
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18110.0010100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGGT.........................................................................................................................................24110.0010100
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATT...................................................................................................................................................................................22110.0010100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTG........................................................................................................................................2519.00990
................................................................................................................................................................................................AATGTAAAGAAGTATGGAGT..........................................................................................................................................2019.00981
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATAA..................................................................................................................................................................................2319.00990
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGATG........................................................................................................................................2518.00880
droWil2
ACATTATCC---------------AAA--TATA-------T-AG------------------------ATGGTAGATA-------------------------------T---A--TATGTAG-CTACT----TGGCCTCTTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATTAAATAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGTCCGACATCATC---TACAA------------------TATAATCTCAA--A-GAAATAAACT-----------------------------------------GCG-AGTGACT-G----TCTATAAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2213227179.0032271793285977923853151316126927618
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211153590.001535902190066400861033113086
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21171727.0071727169819169854884
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23150379.00503797121721885294189930
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20135884.0035884120699935913744451
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23121234.002123438155794323302803
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2019845.009845098082584
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2217528.0075280271817815642465
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2217329.007329171195109513063716
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2213816.00381613982322437748
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2013748.003748169256872312627
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1912544.00254401400772122250
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1912487.00248702476704
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2311853.0018530194155705799
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................2111796.0017960359254756427
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2211530.00153001432293237
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191988.009889537127121374
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................221980.009800976301
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181860.008605540960126210
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................241511.00511016716943132
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191440.0044034109711
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231391.003911294373227
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211357.003570104164584
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231339.00339023696232
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241337.0033701801241122
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211307.003070302005
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231293.00293017488427
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241207.00207096641334
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181160.001600160000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211159.00159257343531
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221147.0014721230184
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181144.001440129564
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221143.00143270203516
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAC...........................................................................................................................................211130.001300127021
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211124.00124583131310
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201119.0011908127110
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211113.0011303442928
...........................................................................................................................................................................GTATATTAAATAAGCATA.................................................................................................................................................................181107.001070001052
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18186.0086083111
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................21186.008605751014
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................18168.0068256226
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................25161.006102623210
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACT..........................................................................................................................................23160.006012124410
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................20157.00570371343
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACA..........................................................................................................................................23153.005302412017
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGAG............................................................................................................................................20150.0050050000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................23149.00490811624
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGG.............................................................................................................................................21145.00450231228
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................24144.004401912310
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGG..........................................................................................................................................22143.0043043000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................21143.0043039130
...........................................................................................................................................................................................TATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................24129.00291111124
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAG...............................................................................................................................................18128.0028013582
................................................................................................................................................................................................AATGTAAAGAAGTATGGAGT..........................................................................................................................................20127.0027212526
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................22127.00270412011
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................23126.0026026000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................23125.0025025000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................22124.0024117123
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................21124.0024019050
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23123.002308762
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAGT..........................................................................................................................................19123.0023214106
dp5
---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAACA-TAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACAGCGTC---TACAGTGAAGTGGAAAAACTGAGTGAAAACATA---------------------------------------------------------GC----CTTAAAAC-ACACACTAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2213337846.00333784623171829879002725102462183888995579129765175452101881
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211426786.0042678602628073506678221751767366063140492573327998
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................211168799.0016879901674302257145266375183107214
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................201119464.001194640828566291168196258023264185440192898
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231105684.00105684146082381945662008476135847273931322729
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23132261.003226111911079382746110838369601565451
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................20125785.0025785025574150861235360
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................22116851.001685113682690730792048191191167161640
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................19112156.0012156093272514273071960124229143
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2219115.0091150599794132121361202310722951
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1918311.00831108280100117183
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2016881.006881176319283894141240112
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2214384.00438404289954550679
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2413623.003623120228197211061159465634
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2313115.0031150528829637349262309496785
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2212138.00213808272436287283482637264
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2211862.0018620185021116100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................2111817.0018170755916795839274425
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191994.009940939124738120
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181938.00938093600000200
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251806.0080604778123162691245
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191760.007601565266201546000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241747.00747045892131520812174
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231706.0070606543312149461
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231704.0070405982313181318696
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181700.0070076077891051100
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211611.006110148246981326613124
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211593.00593012461419543501565
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211543.00543054200001000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231514.00514035416012131271
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211431.0043112771139139000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201427.004270319131787504
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAC...........................................................................................................................................211415.00415040723000300
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241415.00415021645261479188
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................181332.00332032700212000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211326.003264229934473000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181321.00321024941123951316
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221308.003080128150131601000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211217.002170867245553235
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................231206.00206020600000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201174.001740117630733341
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221173.001730122555721233
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241158.00158083520360212
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTT...........................................................................................................................................221152.00152079309251323
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGAA.........................................................................................................................................221144.00144064150173000
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................181111.00111010900011000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACT..........................................................................................................................................23185.0085052540218022
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................21179.007907700001001
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................21179.0079049232410000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCT...........................................................................................................................................22177.0077000026483000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23175.0075042141221031
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................22171.007106234200000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACA..........................................................................................................................................23166.006605004019011
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGT............................................................................................................................................20162.006205800002020
droPer2
AAGCCATTC---------------A--GATAAA-GTGAG-T-GAGTG------------------------AGTC--------CCCACCCAGGAGAGGGCTAATAAAAGTCAAA-------GACGGAATCAGAAGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAACA-TAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGCC---TACAGTGAAGTGGAAAAACTGAGTGAAAACATA---------------------------------------------------------GC----CTTAAAAC-ACACACTAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2212788939.00278893953517316416811302722339961865621
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211331653.00331653074607611951219511227412
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23186832.00868320100543251731535769365
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21163101.0063101061507361161611281
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20146834.004683401144144846186532638
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23131022.003102204112109534163024637
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2219040.009040016856343612615595
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2018865.00886508587057266
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2217740.00774001648261624095495
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1914344.00434401092101192392884
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2213929.0039290835291003702595
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2013230.0032301920022365681053
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2412175.00217502793381421713
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2312053.002053017660932091515
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2211388.00138801118186255
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1911383.0013830131003268
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................2111269.001269031631131908
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................2111163.001163075321112952
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241613.006130660634507
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191604.006040283039309
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................221531.00531049400037
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211474.004740451315410
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211379.00379440144326
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251369.003690450419301
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231339.003390481114275
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181334.003341914081110146
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191292.002921116011201674
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231278.00278020430863
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241263.002630400720196
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211256.0025602511243175
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231208.00208016801930
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGAA.........................................................................................................................................221203.0020306003194
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAC...........................................................................................................................................211181.0018101741105
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201170.001700350312120
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211166.001660120258643
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181161.001610850103729
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241159.00159018007134
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201140.0014005206280
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181137.0013701330004
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211137.0013701360001
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCT...........................................................................................................................................221135.00135002138931
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTA.........................................................................................................................................22190.00900401184
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................22187.008712603651
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACT..........................................................................................................................................23176.007601511752
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23174.007401801946
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18174.007405001221
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................22165.00650101162
droAna3
T------------------TAG----AATTAATGGTAAA-----GTTTTCCA-AAAAG------------TG-----AC-GA--------------------AAAAATAT--------------CAAGA----GAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAATA-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACTTCAAG-TTT------------AAA-------TTT-----CAAA-AAA---T--------------------------------GGTAAGTTTTAAGAAAAAAATATTT-G----TTTTTAAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2211706439.0017064393059483460518607162577556127628575
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211148875.00148875307482346368114137967724323
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23151950.00519506762154619136122895410885
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20143071.00430718483456381807264825805
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21136245.003624535241101596342541
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23118418.00184183638335541135102972959
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................22117948.001794856519193375672810068
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2214369.004369113547273522144664
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2013523.00352334411175320
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2213124.003124273156425324567371
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2012259.0022591582171552218375
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1911591.00159134482117995125
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................2111173.001173522090880149
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2411092.00109221920379552219
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................231979.0097910828411159203214
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................221956.00956782100511742
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................191953.00953916102331
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211509.0050914234139752
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211469.00469194912631460
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................221444.00444433000101
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................212443.008861795318342339
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241425.0042596502424852
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191324.003241585121427108
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181310.00310145810216165
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251269.0026960203113343
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191241.002411632345019
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221228.00228197272002
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231207.00207118102142637
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231198.0019848201411519
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................202177.003541520626368
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241174.001744630138230
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231149.0014911921999
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................231135.00135222076935
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241121.00121250067713
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211119.00119402025124
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201113.001132690115512
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211111.00111361024428
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................221100.00100145126711
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................21195.00958800034
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................18194.009447512786
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTT...........................................................................................................................................22184.0084500204613
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCT...........................................................................................................................................22277.50155005695526
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................23175.007520004492
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATA..........................................................................................................................................23168.006812017417
droBip1
T------------------TAC----ACATAAAGGTGTA-----GTGC-CCCAAACAG------------TG-----AAA------------------------AAATAT--------------CAATA----GAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAATA-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGAG-TTTACAT--------------------T-----CAAA-AAA---T------------------------------AAGG--------------------------T-ATGTTTAAASizeHit CountTotal NormTotal
No Reads
droKik1
C------------------CACTAAAAGTTAGCTGGC-AGC-GGAAAAT--AAACCAG------------TG-----AAATAAC--------------------------------------CCATTCG----GGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTAAATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAGACATCGAAGTTA--AC------------------TAT------AG-GAAA------------------------------------------------------------------------TAASizeHit CountTotal NormTotal
No Reads
droFic1
AAACTGTCC---------------AAAGTTGAACGGGTCGCTGGAAAAT--AAAACAA------------AG-----A-------------------------------------------AACGTAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAACTCATC------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GAACTGTCCAAGTGAGTGCCACTAAAAGTTAACCGGGGGGT-GAAA---------------------AAAGGAAACGAAAT----------------------------------------AACATAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCTGACATCGAAGTAG--AG------------------TGAAAACATA------------------------------------AAGA-----A---------CGAA-AGTGAA-------TGTCAAACSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAGACATCGCAGCTA--AG------------------TGT------AA-AA------------------------------TAAGAA-----A---------TGAA-AGTGA----------TTAAAASizeHit CountTotal NormTotal
No Reads
droBia1
AA-CTGTCCCAGTGAGAGCCACCAAAAGTTAACC----CGC-GAGATA-------------------------------------------------------------T---AAACAGGGAGCAGAAT----CGGCCT-GTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATCTAT-TCAAGCCTATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCTTACATCAGTGTTC------------CAA-----------------A-AA-GATACA-----------------------TATTGC-----T---------TACC-AGTGATT-A-TTTTATTCATASizeHit CountTotal NormTotal
No Reads
droTak1
C------------------CACTAAAAGTTAACCGGC-GGA-GAAT----------------------TTGGTGGAGAAAT---------------------------ACACAAAACAAGAAACATAAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATCTAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCCAAACATCGAAGATA------------------------------------------------------------------------------------------------------------TCAAASizeHit CountTotal NormTotal
No Reads
droEug1
C------------------CACTAAAAGTTAACCGCT-CGC-GGG-------------------------TG-----AA------------------GGAAA-AAAATATGAAAAACAAAGAACTTTAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAG-AAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAGACATCGAAGTTG------------AAA--------AT----ATA----------------------------------TATAAC-----A---------TAAA-AGTGATTTA-AAATGTTTAAASizeHit CountTotal NormTotal
No Reads
dm3
GC------------------GTT----------------GT-GGAAAATCCAAAACAA------------AG-----AC-CATC--------------------------------------CCATATT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAT-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG------------AAA--------CT-------AA-AAC---T------------------------------GAAA--------------------------T-TTGATTGAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................22117533792.00175337920000179815113436810111230916487450753130173132014621670655918915105218610542128375645328824123894693925843325428046494446661603151493432224983141593020686964326611206431032390004355622040118800000000000000000030228723324411968925505281711452870622521433173103560611172465556615776254167283519041544261383959234915103252211610064192669567378285158051559669029585308916038436872112469421120042218951229701669146461581135291274024026312364622434147326369154391816519315696888469908747782741885535916629410444100011016135919336092034051549023052068419205139336182323464077911873995165067774633228945949321312126175655327476686617829421357839144767221293301382878480463605249270563221433550233578596493155327416744793310055428202230889581063986444138701724891829006445237425521476881128783490128562151729068102087294197970336138712132681296786325933954121925515819426273198973337082094143914032687620540152254329312219182103341893192017382939972550299852934899293250656551289687376822995621440685588706336339125491154373402756221363634106784183429770116305672857600128674172479818122345634168462048187092955974054114761586
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGATC........................................................................................................................................2515974282.005974282000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036013252372950000000000000000000001000000000000000000000000000000000000000000100000000000000000003010100000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................2111148252.0011482520000131157241436553620230012130708731134016318981253084446132281036100181148165116138145507111118511818914321915048215210300027327837350000000000000000063425239161316222228050011066353334828500361994310086028841226032772441102618213120334676735314311738237309515391489186792125564831816413391281285130000162324983024968157991723629726840534813415123248223140000002119015639485041040704422109450951413282106553347738128211111200277441857713063830001109192908132248792612301738312860190006494946270435324165485984742504241426789289766612000480430001824110726831554215002983303253071775341000136650002141710052012030122308037692330833072774014971131806422271311313734172932182831822535938750253424139933341010241156646815219029823831026391353792752610999611510272131815655173267448740210423308654090447343111003
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAATC.........................................................................................................................................241797614.007976140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443910353704000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................231611558.006115580000593802148170270300040618370009000000005919321043152617109231451846164421951117000000000000000000000007837278136552101280778582135510871737138816625753347121872271066142139510329197032447542552873456314176327619784684000000000020204413018074654410190168937584228000003000413110116070127410246114674310715318371520341870220087013036210873002110651275161027011701700000010671863350810931288125232761039152876112370001683744678700237113034602392742019746530086297600012327200000023000000002571895478293230324641711296012036880954279269892591960717941461913136911092321562821961837225314472968413567517823074254004310640715183955247901162891620636241293181200000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231603940.00603940000011557151419381230110032012287940024200000004628552643342844200391774483358552200533100000000000000000000000101177632339486290190135026413504432023117501383320851177961061921392121854714727834817258151541437253944816200225732819333054965334365010013114095811851452919321917427621442307010111188000004250054667810690110811430712782596832119414185729450120006593716573819330455241637404184231792251118000000381331721111788206018692271617814501966143918880000222914910091649221838216973301875142160524831000128260001104400311030546399095759378456835346270401209274416051891982335228218842024813131111031215184628153350262999426497844763211510116361965644104310152252250527883411840577142142117335338271443902200
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAC.........................................................................................................................................241365031.00365031000010000000000000000000000000000000000000001000000000000000000000000000000000000000000000200031300001000000010000005000010302011000000000000000000002000000000000000030100110101023000003000000000000000000000000000000144283024000021886214578300000000000540200000000000000000000017211112000007210713230180112110191700300000000000007121411171217000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................201245731.0024573100001814012740602101206199890210001210219942442504248212614415265245326352411924140002390119886400000000000000000410138114304983011055534664153119170358206052155553013427888143323232201010300115832563118411289703511002531861127706850705114025241631201700000220000350652028412917745039316197863783336715000040512012329384000251346122361013189011710000017213501018133067310801049273672012803411172000045320016510901183124011329751969211430001025500001080000000049038535163288474381621817490010592485155433554619300234752643059171441698220540956881087411010490014262011210300100002804121619838179357424836712849152812202000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241122305.0012230500001100001000000000003000000000000000000112000100100000000000000000000000000000000000001182005417002157300100210101401310303340110530000000000000000000091000000000000001022011001130130280280000001310510000050000100010000000001434102815371513514000070061483440000017141000424301100000200000000000000022074232241900001441655500737180133331816810151124005418120000000001093542627511179231280000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................22159550.005955000009811134994864025204002805511201000000000361751192055348645265100000000000000000000000011122066747351003813113330130345215395110146105317904043711018065151148828940221112514121068574580000001000235618181110206333441000000000002363330231115133691816346140312007001751119481300034412480000211341000000003830520337116320821159213419298267000115481264006421028518230017153400337000001760000003000000001089061701066102973503130100116213798529211216051263786344612063029217224973335134630016125937800000100040800230802724102499321772062000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................22135331.0035331000034013621405000001334003000000001133373040178139285142331343400000000000000000000000010004125553900017311129516233164420263315400007310731343303602011612660193590182000000000034102074121911182186341530000023106269890108011863232140043150100444671200009161000000282500000000010826432746555124146723175000062039800103440121110390092258321138000002393000010600000000754079044039403231970000835619425065246324731256964315811202394611116441187624451022712111700100100020249610061948507810632631100000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................23130997.0030997000045003313501001001317002013124351018761149852882571131052344000298481211540000000000000000000001334482013694015724222593115193313001027904303313118141443129311573771260410000010000191420241129514123149517500000100010031520451119451273211542400000331345370008069000000200000000004235811316733385712721384531000037582198008441018217130017521391197000023710000002001000001322227248223647104000042062053233331169985062550268901854282118311055922011174860003000000501102747142943610781143641000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21122163.0022163000021011000000000001112000118363997061123244147311410360465430004092932230000000000000000000014110894000040137525142314311661406384191013371511333252812935221781179159860101722715714000001300401471319011151295117151100000000100600591057213117185241447116379116556000003646117600070140000001400100000035201681095465577825643339000083003425184614001372810100000002460000102000000005237029156312521713200000136119129252239725459255197432181132453051775701100639210300000020390336695196440546356000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................19118912.001891200000000000000100000361210101195415056212134212451152832113045193300097514200000000000000000100213018800181212020919211091792002402122001812519212010514371101015223513700004411530778714349007200002400000419802029152165435210264139131400000662114521500036090512463175512002100000262401291331532531402324942000053430073420906530011832710770000020000010000000000292252517930214111280000115111018224638822021722164036758275030722756004360980000100000031991382944423390654722000001
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................22117957.0017957000066002143130100000001800000000000014268244161702210060000000000000000000000001002175110006212180013150110424260030504060029015340801065111011110000000000054101123810514377525600000000020107830112011551124010013100000402233500030260100006601000000095750271525491222284530650000218169001814099500003647840166000029800000030000000051541414023543625170000010231171188661305793635432055043912710250214541056104500102283100000100010578279669296420564312100000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGATC........................................................................................................................................24117483.00174830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114686015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTC.........................................................................................................................................24115281.00152810000100000010000000000200000000000000000000000000000000000000000000000000000000000000000002000118001020100001100000900002000301000000000000000200000000000000000000000210100010000000000000000000000000000001000000000011211241104000085416422000000100003301000003000000000000000010200010000052533753030114902220001043000000000001830208111213000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................24111676.00116760000210000100000000001200000000000100001021000001010000000000000000000000000100001009000332551027345100101547300100490200180193000100902552126000001000000100021001700200000000000068760450022650420138012410000003522500003013000000450020000001111395037348130392026000048629900100675520001864606800000210000000000000005521387106532300000176671951814391027213681532729270070649600551339000000000101971940823411331709697000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2419327.0093270000200000000000000000100000000000000000020111011002010000000000000000000000000002701310004422122138377810261930500103630720330918015081410709167000000000003100212303210220000000000073102101531117223139200000812151000023202300015000000000527573151346719412135000036122600740242210007462031000006100000010000000053965435833100002916210485211022031171140185218533100564591011264274000000010109401306766179234520312000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2019026.0090260000100000201000012014100001999010214024160014150521220133760000673900000000000000000000101014810015040900108172641473001010317208328030236011462000000000095719134347280396200000000000406206540236178103110132494711000004687420015010400000532000000001042433901814001200000100362507533100216415005400002132000000100000000815821510623851445000043562716309077224713688047949469118010500143801000000000192699410124266252227000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................2117809.007809000020000010200000000030000000000000111111808000203010000000000000000000000000001500240003002511024210012914610000220020024279030316021128180000000000001001030339030200000000000334303110070511405400000400310002010000000110000000004111215287172131500001114002304515300023814705600000220000000000000007367433262800000482250707288849081411731014901862190061818000000000002222130235012669275266000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGACC........................................................................................................................................2517436.007436000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000010101000049372487000000000000000000000000000000000000000000000000000000000000000000100000000000000001020010000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................2416464.006464000000000000000000000030000000000000000000300000001000000000000000000000000000000307000011691019185700832650040533011017012703093250150540000000000000001020082000000002000001516018001230132201301000003201100000500000000000000000131121313123712141190000866519001101721100177350420000024000000000000000123213344112000008129925642552390107122562024003944310029203000000000000627370501156184348289000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................2116387.006387000000000000000000000110000000000010000000001020000010000000000000000000000000021000600020400044100013020000010010031991102424024111111000000000001000000129002000000000000427403660206297818678976230000001000500002020000000100000000002154011110100000440001041500008997028000004110000000000000029316212090000018870295255415216023541926152022219500265800000000000639954588248249408353000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTC........................................................................................................................................2515665.005665000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010101011102000036551965000000000000400000000000000000000000000000000000001130100000000101100100000000000002523225000000
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................2215480.00548000008812019342030000000000000022980174101200000000100000110000010748460000000000000000001011426314342838182001040374210057108436361688911422410420532326018096216712116014113391125161001000000010757000000600000000000000062630876424885183241156837000003101100000000000000000000000080014017995338471121331620000000078000000030030000000000000000000000000000000002000018800000000000000000000000000000001000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGATT........................................................................................................................................2515227.005227000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001100100000000000000000000000000000000000000000000020000010000000000000000000000000000000000000023251101000030602048000002000000201000000000000000000000010000020000021000011030100200300200000000000003121121223000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................2315042.005042000041001100100000000000000000000000000000000000000000000000000000000000000000001005200000110012201122500001000000700101001100000000000000000000010002000000000000000120100020004000000003000100000200000001000000000031142651404000024751997000000000003201000000000000000000000262120212000008335363904324081102521005250000000000011466511141315000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2214855.0048550000100012000000000000700000000000200000000020000000100000000000000000000000001007034232007124650121724101425195000033605109058010131701041300000000000040000033240230000000000001719019104289172210538000001700310000080000000000010000021116804022321000051007101217200048140900000160000011000000005257365414160000190859610814134420011108351551716424023150010923300040000005030728226885189259195010000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................1814660.00466000000000000000000000240200065110264971600000000001000000100008529570000000000000000010000531431105413510104182061418200000140410230131010010016881212119440000312000012021560000000000000001538014962553102654118122141183003007418944500014111082102000140210000036024231062002110000000031170114000034160700000100000000000000022832141921600000304268763639555903982604970109217006590000000000048163427101534000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGATC...........................................................................................................................................2214611.004611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000003000000000000026731933000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCATC.......................................................................................................................................2614496.004496000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024572039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................1814481.004481000000000000000001002314000210000001120120100012310020001000000000000000000030010400100030840014842631100000002000040710001030302200000000001510120058617106190140000000600007100161214122612011000000819114000603000000000000000001510142118001100000000000025301140000201040000029000000000000000221273223316170000161568317611448232421504983119109119036900522360000000000090251213510988520000018
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................2114472.004472000002000000000000000000000000000000010012102802091401000000000000000000000000100100020000111001821800051200001100000916986211206370523504300000000000001001201170000000000000004133036000613020500000030130000100000000100000000000091020120214000018586001201536500010430021000001100000010000000041535701114514600002201927131186915583033074263877491412471004240000000001045263426295236000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................2313519.0035190000310010202000000000000000000000101021212200000100002000000000000000000000001000400820002646180086170018210001003303301911214060362505056000000000022200000001320020000000000016320280042208158154300000740100000020000003000000000048151161812307108120000262400210149000068170210000028000000000000000530122872536000031017519027156967700390112819311360335329001631400000000000168889734387767000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................2313264.003264000030000010100000000010000000000000100000001000001000000000000000000000000000000000000000621000310001222900200030000801102021703063000000000000000111112000000000000000092101000490603402100000044100000003000000040000000001527151513461016233000040180000019520002418090000030000000000000006297534302700001231137351427220259355384010712800151020000000000008733631955442112107000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCTC........................................................................................................................................2513225.003225000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019191306000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2312943.0029430000121003121150502000200120000010000021000000002110010010001251000000000000000000000111528182130400602716668251103131393107147249301631122152437113133115000000013030110000000000001000112025000000000000000210000040110000000000000000000100000000000000000297802350321000000001405300002820200000230000000000000000315151100000990283133136014220415021220004200001000000101122411178000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCG.........................................................................................................................................2412728.00272800000000000000000000000000000000000000000010000000000000127339310440000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200140010000000000000000000101000000000000000000000000000000000000000200000000001000000000000000001100000000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................2112636.00263600000000000000000000005000000000000000010120110001010000000000000000000000000000000010000001008170002020000100000000000200130513500000000000000001100170030000000000001023010820122042122052300000100241001050000000001000000019172110000020000000002011700002223060000014000000000000000221624526150000088669910528463920163013085401029300512150010001000022841022261100132136000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAATC.........................................................................................................................................2312363.00236300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519844000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................2112310.00231000002207001000000000011000000000004000010010010121011000000000000000000000000000020500004453105411006402000001000001400203021140000000000000004120113011680020000002000008607001413290801711300004006300011100000010000000000341616441761463110000000096043000046602000000380000000000000002531051024000023036244940161814809612241220115143005240000000001011479190616512376000000
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................1912299.00229900000000000000000000131000010000000010101260411032100000000000000000000000000001000000000030000043011000000001000000030000010000000000000603379013246114130000000000000810013016352290509200000123200000403000000030000000002470177001201002000000007407300011916013000001200000000000000038279222537019000036182981564112474570177160427020390026800000000000257410617875368000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................2112247.0022470000320001001000000000000000000000101001014010109310100000000000000000000000000060010000105250059200081022700000350200909130601011507076000000002000000010025000000000000000272902900614030280361000001020100000010000000000000000019129228302313000043004203412100011915024000007000000000000000742934839314000013143433611668566024151107740119141000250000000000076316125536051000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGCT...........................................................................................................................................2212196.002196000000000000000000000000000000000001000012000000100010000000000000000000000000000100300020100010100100000000000000013202010803512827000000000021200010026600010000000000010200190002010102300000100000000000000000000000000001360000000100000000115054101000294410570000030000000100000000024122039190000113919833216525314001711317111250106141001000000000000013263246000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCTG........................................................................................................................................2511811.001811000000000000000000000000000000000017810000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000001000004000000000000000000000000000003010000000003010000001201200100000000000000203100000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTAT........................................................................................................................................2511712.00171200000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010200240025000000000000000100000000101100000000000000000000000000000000000003000004020002000000200000000010000000000000000001004731172530000789479000002000004803000000000000000000000053602040000080159122501721419086001122000000000007649261183321000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTAC........................................................................................................................................2511561.0015610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000970549000000000000100000001000000000000000000100010000010100000020010302300110000000000007451102000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTA.........................................................................................................................................2211512.00151200000000000000000000010000000000000000000000000000000000000000000000000000000100000010001152007570014020000100000113121010101107140000000000000000020019000000000000000612019231611229648228800000200220001070000002100000000026830001000000000000110111000011100400000500000000000000003250201000015347865910213110603139509657001206000000000107010217153607260000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2211441.001441000000000000000000000000000000000000000000000000000000000000000000000000000001000001400000220010300000000000000000300101000200020000000000000000111021500000000000000044071790824053103700000001311200103000000020000000000682000200000000000033020000040010000030000000000000000021011002000001933383318281790610046033260046150010010003012527623136658767000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2011439.00143900000000010000000000000000010132530180000001101000000000002451700000000000000000000001010000020222055800280200000110010001250601032302422015000000000100000013101700000000000000045590380115691350560136400000350000000010700000000000000000223813916320000120001040000092040000020000000000000002324100120600000811131941729250220101150526000575000000000003623305183425000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2211427.001427000000000000000000001010000000000010000100000000000000000000000000000000000000000005000051210044400112210000000000020340204512013276000000000000000000001000000000000000172701710102631904804640000021001100000100000000000000000003012102311000019710300000110000540200000300000000000000001022404000001710242031418903225041704056001951200000000000127757623285049000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................2211395.0013950000030000000000000000000100000000101000000000000011000011100000000000000000020023050000121204401012351014292220000337230031001020002000000000000000001000122122000000000000000150500050005010000000003000010700000040000000000277433532012300002100100210000252050000000000001000000003212183362900001152514262914269460613176201121050033120010000001029135117303623000000
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................2111354.0013540000050673102000000000000002122831110100000010010000000000017190000000000000000043132794516110713008821201019621098317126114001217391573203405100010003060000000000078110100001400000000000000011220133231230313512142200000500100000000000000000000000003003169234736000000000200000001102000000000000000000000000000000000000004300000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................2511247.0012470000000000000000000000100000000000000000010000000000000000000000000000000000000002000000104010136000011000010100000000000001901010000000000000000000013000000000000000110700030305070000002100000000500000001000000000071112106155144500008700200450000162403000008000000000000000210510114312000001452153517100251629270497200238100000000000015422410126336335000000
droSim2
---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2211577512.00157751230973234527231410948239106153866381375289216244332383333592033791839696544324
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211131368.0013136813118437426195979747449648180144985132923705008477545636392
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCG.........................................................................................................................................24141757.0041757000076653409100001000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23139235.0039235114301891300143716381498791309911222311329221397
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21128968.002896806327954191291210128026330273350151
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20128533.0028533520675117296708128398113175885171665207795254142
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................23127703.00277038421654410014371386307415314942680163497732716144
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................19115832.00158320002472479120632241812398725412139105
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................1819211.009211000331523749029681763312000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2214382.004382010169500234235218901101472231421215
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2013737.00373700036376471011101272013
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2312424.002424134179165586119831741006548456403011
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2012344.0023441392522121367171156611478119016011
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2212167.002167010212900436101412006
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2211844.001844022261007277366572940667496315
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................2411239.00123925064300148461356112382021
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191869.00869102372117100120000166900000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................241808.0080800078001721481541079525227
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181747.0074786302112281200012011301000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211681.00681143006170046222201001
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................191680.00680000617124000002001206
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................221658.00658123585003025625416204
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................221514.005141327149300342164253593976118
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221512.00512034810738501100201000
.....................................................................................................................................................CCATGCTTCCTTGCATTCA......................................................................................................................................................................................191477.004770101620725300000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251361.0036100090042830124309001
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211334.003340001230081352122830561002
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241329.00329000730035430125215000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211325.003252250217004782910436001
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241323.0032320049001717101640190000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................211296.002960002960000000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211274.00274000320054103113214010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231252.002521471450052101817547000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231231.0023103012800757241965000
...................................................................................................................................................................................................GTAAAGAAGTATGGAG...........................................................................................................................................161221.002210000000001219000100
.....................................................................................................................................................CCATGCTTCCTTGCATTCAA.....................................................................................................................................................................................201216.0021600054316800000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGT.................................................................................................................................................161193.0019300000078813157000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191175.0017527113612003004001000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211172.001720001700000000001001
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTAT........................................................................................................................................251170.0017000040001600020139000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGCG.........................................................................................................................................231133.001330000409300000000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231123.001231001000000214519000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221116.0011621618013619820441203
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................211114.001140004337500000200000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTA................................................................................................................................................171110.00110000000111322748001305
.....................................................................................................................................................CCATGCTTCCTTGCATTC.......................................................................................................................................................................................181109.001090004456000000000000
....................................................................................................................................................................................................TAAAGAAGTATGGAG...........................................................................................................................................151108.001080000000001107000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211100.00100121814530000001101000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGAA.........................................................................................................................................22199.0099430890000101100000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23197.00970008002060112020012
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................18193.00930001577100000000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................23173.0073000720000000001000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................20170.0070000550010211109000
..................................................................................................................................................................................................TGTAAAGAAGTATGGAG...........................................................................................................................................17159.0059000000000059000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGCGAA.......................................................................................................................................26158.00580000263200000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAG..................................................................................................................................................15151.00510000001711428000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTT...........................................................................................................................................22150.0050000100103017631000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGC..........................................................................................................................................21144.00441410832700000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAC.........................................................................................................................................24142.00420001000101001425000
................................................................................................................................................................................................AATGTAAAGAAGTATGGA............................................................................................................................................18139.0039213180112119000000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGG.............................................................................................................................................21139.0039100501322300418000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAAT........................................................................................................................................25139.0039000700000010427000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................21138.00380001000212117113000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGATT........................................................................................................................................25137.0037000000000010333000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18137.00370102111210010000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................22134.0034201700011053112001
................................................................................................................................................................................................AATGTAAAGAAGTATGGAGA..........................................................................................................................................20133.0033150240010002000000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................22133.0033030201500010102000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................23132.0032010600032120017000
droSec2
---------------------------------------------------------------------------------------------------------------------------------------GCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAGTTG------------AAA----------------------C---T------------------------------GAAA--------------------------T-TTAATTGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2213611928.0036119287214591491441763386635642
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................231257456.0025745657163170753242327117
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211205205.002052058965594285582515440
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231124089.001240891852982416916013984
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................21181158.008115879179956546477
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20160510.006051018302342516937264
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................22115035.0015035451690613201138
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................2019669.00966996005748
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2216931.0069316591314125
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2316377.006377766286216491100
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................2116177.006177935439519828
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................2415944.0059441839369719389
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2015145.00514529681002468707
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2215001.00500113452762260634
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2214007.0040076722300364671
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1913274.0032741194160851421
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2212926.0029262106582126112
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2412914.002914376206043435
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................2412756.00275661419285209
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................2112441.00244123118878315
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................2112421.002421902743449327
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1911975.00197519422328
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................2311435.001435364991179
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................2411220.0012202158758122
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................211859.00859857200
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251773.00773765763118
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231755.007554682212541
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211753.00753620852820
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191657.006573118416894
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGAA.........................................................................................................................................221653.006531274062118
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211515.00515509501
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181508.0050816612818925
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211495.004951142783865
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201483.00483263184432
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191418.0041835538916
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................221307.00307241871779
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAAT........................................................................................................................................251301.0030157228115
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231274.00274224182111
................................................................................................................................................................................................AATGTAAAGAAGTATGGAGA..........................................................................................................................................201232.0023286108236
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATA..........................................................................................................................................231225.0022550137335
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201216.0021699104013
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTAT........................................................................................................................................251208.0020844147215
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181206.002061712528
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................231206.00206200600
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAT..........................................................................................................................................231171.0017142109218
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGATT........................................................................................................................................251170.0017022134014
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................231163.001636577417
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211145.001453088522
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACA..........................................................................................................................................231139.0013915109213
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................221134.001349517715
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTT...........................................................................................................................................221134.00134996722
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181131.00131130100
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTA.........................................................................................................................................221130.001301899211
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAC.........................................................................................................................................241129.00129447519
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGTA...........................................................................................................................................221120.001201482024
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAGA...........................................................................................................................................221102.00102296229
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGAG............................................................................................................................................20198.009897010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGACT..........................................................................................................................................23196.0096157407
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................18192.009277708
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................22189.0089662183
droYak3
C------------------CACCAAAACTTAGCCGCGTTGT-GGAAAATCCAAAACAA------------AG-----AA-CATC--------------------------------------CCACCAT----CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGTCATCGGAGTTG------------AAA--------GT------AA-AAGA------------------------------------------------------------------------AAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2212707444.0027074441091091127504930305630287101305746366171204116835770
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211197551.00197551310897423469177314607456532261101310634
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................211127313.001273130126500195208107531130110
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231105095.0010509542389439743334457025863462245523250
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23135158.00351580142415218638236109413648160670
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20129045.002904501464132387312465495275247320
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................22121762.002176247142027178151675110020
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................20112064.00120640120225005310010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2319627.00962704898251386201253540020
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2216647.006647240365121005220817280081
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2014732.004732324283143978371320000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2213462.0034620276653923271230020
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2212963.00296301491255174653396277050
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2211651.0016510161524000120000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1911544.00154401534300160000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1911531.00153108013981568555001332
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2411250.0012500345266306405561042
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................211898.008980677685311391040
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................231725.00725041219911111910000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231692.006920594352402351010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................241654.0065403302823262630020
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................211634.0063407595312104180030
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181490.004901636240529560000
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221458.004580273173110010000
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................191457.004572236616704420000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191405.0040513822104150000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211366.003660364000020000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211346.003460892543461751012
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231344.003440205803151130000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201336.00336014300313000303
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241311.0031101273332131330000
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221280.00280811370918671030
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................211221.00221510959321420000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGC..........................................................................................................................................221169.0016905610640210000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................211160.0016009423425320000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241125.0012504613003590013
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGC............................................................................................................................................211120.00120025191147260010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181118.0011808621314100011
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATC..............................................................................................................................................191114.001140411000000000
.....................................................................................................................................................CCATGCTTCCTTGCATTCAAT....................................................................................................................................................................................211110.001100693630020000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................221110.0011001820103680000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................23198.0098040253010200000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................18187.0087087000000000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................25282.0016404024108910000
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................20179.007902023012310011
droEre2
C------------------CACCAAAAC---ACCG--------A----------AACCTAGCCGAAACAAGG-------------------------------------------------ACC---TC----CAGCCT-GTGAGAGTTCCATGCTTCCTTGCATTCAATAGT-TATAC-TCAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCGAGACATCGGAAAA--------------------------------------T---T------------------------------AAAA--------------------------T-GTAAAGTAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAG...........................................................................................................................................2214204467.00420446714518867024510558119238212790021105055316
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGA............................................................................................................................................211258677.0025867713324226215003148792077242470
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAG...........................................................................................................................................211158970.0015897015716626921327168353
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGT..........................................................................................................................................231124373.0012437335519361020571735622021922822
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGA..........................................................................................................................................23158023.0058023246055677603482509866405
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGG.............................................................................................................................................20152952.0052952242594724631192062770120
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGA............................................................................................................................................20114046.00140461396105262160
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAA...........................................................................................................................................2219945.009945470965166148378910680
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAT...........................................................................................................................................2219199.0091991747162351519105146256
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAG...........................................................................................................................................2018743.008743661217458711088740
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAC...........................................................................................................................................2214747.0047479022170691986597481
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGT..........................................................................................................................................2214722.00472239323916126121110
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGC..........................................................................................................................................2313292.0032927205101002247649731
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGAG............................................................................................................................................2113228.0032281593712219306650
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAGA..........................................................................................................................................2212806.00280627501024940
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATG..............................................................................................................................................1912663.00266310976361512252840
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGG.............................................................................................................................................1912416.00241623801013040
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGA..........................................................................................................................................2111942.001942527324211482380
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAA.........................................................................................................................................2411749.001749751102108371300
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAT...........................................................................................................................................2111670.0016701660001450
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTT.........................................................................................................................................2411589.001589484261297942640
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGT..........................................................................................................................................2111274.00127428691287821770
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGG............................................................................................................................................2111129.001129911887864510
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGG..........................................................................................................................................2311096.0010967941958851823
................................................................................................................................................................................................AATGTAAAGAAGTATGGAG...........................................................................................................................................1911093.00109354946242112990
.................................................................................................................................................................................................ATGTAAAGAAGTATGGAG...........................................................................................................................................181803.0080323367222982352
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTA.........................................................................................................................................221790.007909611314332460
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGA............................................................................................................................................191678.00678534001114290
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTA.........................................................................................................................................241646.006462254122316861
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAAA..........................................................................................................................................231601.00601305260252360
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGAG...........................................................................................................................................231591.0059151232034382
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAA...........................................................................................................................................211568.00568567000100
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGAA.........................................................................................................................................221471.0047198060304630
...............................................................................................................................................................................................GAATGTAAAGAAGTATGGAGTT.........................................................................................................................................221427.00427430452471280
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGT............................................................................................................................................211408.004081203224195640
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGTTT........................................................................................................................................251361.0036194110205600
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGAGAT.........................................................................................................................................241231.0023180111124240
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGA.............................................................................................................................................201207.002071615003380
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGGATT..........................................................................................................................................231207.0020710607545440
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGAG............................................................................................................................................201206.00206206000000
...............................................................................................................................................................................................GAATGTAAAGAAGTATGG.............................................................................................................................................181200.002009000086240
............................................................................................................................................................................................ATGGAATGTAAAGAAGTATGGA............................................................................................................................................221163.001635914573210
.............................................................................................................................................................................................TGGAATGTAAAGAAGTAT...............................................................................................................................................181157.0015711103022210
.....................................................................................................................................................CCATGCTTCCTTGCATTCAATA...................................................................................................................................................................................221150.00150895604010
.............................................................................................................................................................................................TGGAATGTAAAGAAGTATGT.............................................................................................................................................201145.0014571024223511
..............................................................................................................................................................................................GGAATGTAAAGAAGTATGGAC...........................................................................................................................................211127.00127126100000
..............................................................................................................................................................................................GGAATGTAAAGAAGTATG..............................................................................................................................................181102.00102101000100

Generated: 10/20/2015 at 06:59 PM