ID:

dgr_91

 Coordinate:

scaffold_14387:2670-2726 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dgri\GH10341-cds]; exon [dgri_GLEANR_1029:3]; exon [dgri_GLEANR_1029:2]; CDS [Dgri\GH10341-cds]; intron [Dgri\GH10341-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

##################################################---------------------------------------------------------##################################################
CCCACCAAGCACTGTCCCCAATCGCCCACGACTCTAATGCTCCGCTCCAAGCAGCCAAACAACAGCAGCAGCAGCAGCAACAACAACAACAACAATAATAATATCAGTAACAGCAGCAGCAGCGCAGCTGGCTCCAATAGTGGACCACGTGTCCGCA
**************************************************..............((.((....)).)).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Anti-sense strand reads

GGGTGGTTCGTGACAGGGGTTAGCGGGTGCTGAGATTACGAGGCGAGGTTCGTCGGTTTGTTGTCGTCGTCGTCGTCGTTGTTGTTGTTGTTGTTATTATTATAGTCATTGTCGTCGTCGTCGCGTCGACCGAGGTTATCACCTGGTGCACAGGCGT
**************************************************..............((.((....)).)).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V109
male body
GGGTGGTATGTGACAGGGGTT........................................................................................................................................ 21 2 2 0.50 1 1
...TGGTACGTGACAGGGGCTAGGG.................................................................................................................................... 22 3 4 0.25 1 1
.GGTGGTCCGTGACAGGCGTG........................................................................................................................................ 20 3 9 0.11 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14387:2620-2776 + dgr_91 CCCACCAAGCAC--------------------------------TGTCCCCAAT---C----------------GCCCAC--GAC--TC-----TAA--------------TGC--------TCCGCTCCAAGCAG----CCA-AACA----------ACAGC---AGC------AG------------CAGCAGCAACAACAAC---AACAACAA----------TAATAATAT------------------CAGTAA------------------CAGC------AG------------CAG---------CAGCGCAGCTGGCTC------CAATAG----------------------------------TGGACCACGTGTCCGCA
droVir3 scaffold_13047:11466967-11467123 + GCCGCCAACGATTGG--------TGC-AAC---------------------------G---------------------------GT----------CACGACA---TCGGCGC------TAA---CAGCCAAAGCTG--C--CAAC-----------ATAGC---AGC------AG------------CAGCAGCAACAACAAC---AGGAGGAG----------CAGCAGCGG------------------GCGCGAC------------------AGC------AG------------CAG------CA---GCAGCAGCAACTG------CAACAGCTGCTCCTTCA-------------------------------GTATCTGCA
droMoj3 scaffold_6540:20842576-20842733 - CCCACCTACTGT------------CC----CATT-----------------------C----------------GCT-AT--CAT--CC-----TTT--------------TGC---------------CCAG-----------------------------C---AAC------AACAGCAGCAACAGCA---------A------CAGCAGCAGCA--ACAA--CAACA------GCAG---------------CAA---------CAGCAACAACAGC------AACAGCA---GCAACAAC------AGCAACAGG--CAGCTGCGGCTGCGGCAG---CGG--------------------------------CAGCGCAGCAGCA
droWil2 scf2_1100000004943:15670569-15670719 + AAG--CATTATACCCACCTATTGCCC----CATG--------------------------------------------------C--GA--------------------------TATCAT--------CCC-T---TTC-----------------ATCAGC---AGC------AGCAGCAGCAACAGCA---------G------CAGCAGCAG----------CAACAACAACAGCAG---------------CAG---------CAGCAACAACAAC------AG---CAGCAGCAACAA---------CATC---------------------------------AGGC------------------AGCGCAGCAGGCAGCAGCA
dp5 XR_group8:2357757-2357883 + CGC--CAACGAC---------------------------------------------------------------------------TC--------CACAACA------------------------------------------------------TCTTC---AAC------AACAGCAG------CAAC------AGCAG---CAGCAGCAGCA--ACAA--CAG---------CAG---------------CAAC------AACA---ACA---AC------AACAGCAGCAACAACAA---------CAGCATATGTTGCAC------CAAC---------ATT-------------------------------CGCATCCGCA
droPer2 scaffold_35:288035-288148 - CCCACAAGTA---------------CGGAC---------------------------C---------------------------AC----------CGCC----------------------GACGTCCCAGGAG----CAGCAGCA----------------------------GCAGCAG------CAGC------AACAA---CAACAACAA----------CAACAACA------A------------CAACAAC------AA------CAACAGC------AGCAGCA---GCAACAA------CAGCAGC--------------------------------------------------------------------------
droAna3 scaffold_13117:2898784-2898909 + CCCACCGGCAGC------------CC-TGC---------------------------C-----------------------------CC--------CACCATC----------------GCTCAGCTCCCAGCAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCAACAGCA--GCAG--CAACA------GTCG------------------CAG------CAGCAGCAGCAGT------CG---CAGCAGCAGCAAC---------A---------GTC-------------------------------------------------------GCAGCAGCA
droBip1 scf7180000396543:345586-345747 + TCTATCGCCGCA-------------------------------TCATCACCAGCAACAGCAACC----------------------------------------CCAA------CAGACCGCA-------CACCTG----CAACAGCA------AC----ATCAGCAGC------AG------------CAGC------AGCAAC---A----------------------------GCAGCAGCAGCACCACCTGCAG------------------CAGCAGCAGCA---------------G---CAGCA---CCACCACCAGCAA------CAACAACAACAACATCA-------------------------------TGCCCAGCA
droKik1 scf7180000302469:468353-468513 + CAGCCA-AAGCA----------------------------------A---------------CAGCAAC-AAATGCC-AT--GAC--TT-----TGA--------------CGT------TGA-------CAGCGG----CAATAGCAACAGCAACA-GCAAC---AGC------AG------------CGGC------AGCAG---CAGCATCTG--CAAC--ATCTGCAACAT------------------CAGCAGCAGCAGCGG------CA---------------------------------------GCAGCAGCGGCAG------CAGCAG---CGGCAACA-------------------------------GCATCTGCA
droFic1 scf7180000454072:806955-807095 - CAA--CAAGCGC-----------TCC-GAC---------------------------G----------------GCC-GC--CAC--TC-----GGA--------------GG------AGTTCAGCGCCAAGGAG----CAGCAGCA------AC----ACC---ACC------AG------------CAGCAGCAGCAGCAAC---A----------------------------GCAGCAGCAGCAACACC------------AG------CAACAGA------AGGAGCA---------GCAGCAACGCCAGC---------------------------------A-------------------------------GGAGATGCA
droEle1 scf7180000491278:565387-565536 + ACTGTCCGC--ACGAA---------CGGAT---------------------------C----------------GCC-A-----C--C----------------CCGG------CAATGT------TGCTCCGGGG----CAGCAGCA------TC----A-C---AGT------AT------------CAGCAGCAGCAACAAC---AG----------------------------CAGCAA---------CAACAACAGC---AA------CAGCAGC------AACAACA---------ACAGCAACAGCAGC------------------AAT---------------C------------------AGTGCACAGTGTGTTCATG
droRho1 scf7180000779985:85494-85654 + GCATCCGTGGAG-----------------------AGTCCGGAGAATCTGCAGC---G----------------GCACAA--GTC--CC-----TCA--------------CGC--------TGGT---CAAGC-----------------------AGCAGC---AGCAACAACAG------------CAGC------AGCAG---CACCAACAG--CAAC--TACAACT------GCAT------------CAGCAACTGCATCAG------CAACAGC------AG------CAGCAGCAA---CAGCA---GC------------------------------ACCA-------------------------------GCAGCAGCA
droBia1 scf7180000302193:3010505-3010677 - CCAACCGAAGAA-----------------------AACGC---TCATCCCCAGCAGTAGCGACT----------------------------------------ACGG------CAATGTGCGCAGTCCCCAGGAG----CCGCAGCA------TC----ACC---AGT------TG------------CAGCAGCAACAGCAAC---A----------------------------GCAGCAGCAGCACAATCAGCAA------------------CAGC------AG------------CAG---------CAGAACA-------------------------------CGTACTACGACTTCAACAGCAAGTGGAACAC---TCCGC-
droTak1 scf7180000415376:173965-174122 - CCAAGCACGC------------------GC--------------C-G---------------CAGCCGC-ATCTGCCAACGAGCC--AATACCAT-CC-------------------------------ACAG------C-----------------AGCAAC---AGC------AACAGCAG------CAAC------AGCAG---CAGCAGCAG----------CAACA---------C------------CAGCAGCAGC---AGCA---GCT---GC------AGCAGCAACTGCAGCAG---------CAGCAGATGCTG----------------------------------------CAGATG--------CACCAGCGTCTG
droEug1 scf7180000407756:204710-204860 - CCACA--AAGCA----------------AC---------------------------------TGCAACTGATTTTCTAG--GCC--TT-----TAA--------------TGT---------------GCAG-----------------------------------C------AGCAGTCGCCACAGCA---------G------CCGCAGCAGCA--ACAG--CAACA------GCAG------------------C------AGGAGCAGCAGCAGC------CG---CAGCAGCATGGCC---------A---------GTTT------CCGTACCCGGTGGTCCG---------------------------GTAT-CCGGTGCT
dm3 chrX:7583063-7583208 - CCAGCAAAGCC----------------AA-----------------T----------C----------------AGC-A------GC----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCAGCAGCA---------------GCAGCAGCAGCAACAA----------CAACA------ACAA------------CAACAACAAC---AACA---ACAACAAC------AA---CAACAACAACAA---------CAA---------CAA------CAACAA-------------------------CAGACG--------ACCTATTTGCCA
droSim2 3l:16653558-16653693 - CCGAGTAGTT---------------T-AGC---------------------------C---------------------------GC----------TGCCGCG---TCC-----------------------G---TGC-----------------TGCAAC---AGC------AGCAGCAGCAAC------------AGCAG---CAGCAGCAA----------CAACAACAT------------------CAGCAGC---------A---------GC------A---------------A---CAGCA---CCACCAGCAGCTG------CACCACA----------CACA--------CCCACAGT--------CACCCGCCCACA
droSec2 scaffold_11:135401-135556 - CCAACCGAAGAA-----------------------AACGC---TCATCCCCAGTAGCAGCGACT----------------------------------------ACGG------CAATGTGCGCAGTCCCCAGGAG----CCGCAGCA------TC----ATC---AGT------TG------------CAGCAGCAACAGCAAC---A----------------------------ACAACAGCAGCACAATCAGCAA------------------CAGC------AG------------CAA---------CAGAACA-------------------------------CGTACTACGACTTCAATA---------------------G
droYak3 3L:17000305-17000444 + GCCAAGTAGT--------------TT-AGC---------------------------C---------------------------GC----------TGCCGCG---TCC-----------------------G---TGC-----------------TGCAGC---AGC------ACCAGCAGCAAC------------AGCAG---CAGCAGCAG----------CAACAACAT------------------CAGCAGC------AGCAG------------------------------CAA---CAGCA---CCACCAGCAGCTG------CACCACA----------CACA--------CCCACAGT--------CACCCGCCCACA
droEre2 scaffold_4690:3079981-3080133 + CCGGCCAAGCAT----------------GCCACCGAGCAC---GCGACCACAACAACACGGGCG---------------------AC----------AA---------------CAACGT---------CCA-G---TAC-----------------GACAAC---AGC------AGCAGCAGCAGC------------AGCAG---CAGCAACAG----------CAGCAACAG------------------CAGCAGCACC---AG---------------------------------CAA---------CAACACACGCAGCAG------CAAC---------ATCG-------------------------------GCCAAAGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CCCACCAAGCAC--------------------------------TGTCCCCAAT---C----------------GCCCAC--GAC--TC-----TAA--------------TGC--------TCCGCTCCAAGCAG----CCA-AACA----------ACAGC---AGC------AG------------CAGCAGCAACAACAAC---AACAACAA----------TAATAATAT------------------CAGTAA------------------CAGC------AG------------CAG---------CAGCGCAGCTGGCTC------CAATAG----------------------------------TGGACCACGTGTCCGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droVir3
GCCGCCAACGATTGG--------TGC-AAC---------------------------G---------------------------GT----------CACGACA---TCGGCGC------TAA---CAGCCAAAGCTG--C--CAAC-----------ATAGC---AGC------AG------------CAGCAGCAACAACAAC---AGGAGGAG----------CAGCAGCGG------------------GCGCGAC------------------AGC------AG------------CAG------CA---GCAGCAGCAACTG------CAACAGCTGCTCCTTCA-------------------------------GTATCTGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................AGCAACAACAAC---AGGAGGAG----------C....................................................................................................................................................................2114.004201000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCGG------------------GCGCGAC------------------AGC------AG------------CA........................................................................................1912.002000100000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................GCAACAACAAC---AGGAGGAG----------C....................................................................................................................................................................2012.002000100000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CAGCAACAACAAC---AGGAGGAG----------C....................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................AACAACAAC---AGGAGGAG----------CA...................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................AGCAGCAACAACAAC---AGGAGGAG----------C....................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....CAACGATTGG--------TGC-AAC---------------------------G---------------------------GT----------CA....................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AACAACAAC---AGGAGGAG----------CAGCAGCG.............................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................G--C--CAAC-----------ATAGC---AGC------AG------------CAGC......................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCGG------------------GCGCGAC------------------AGC------AG------------CAG------CA---GCA.........................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................AGCAGCGG------------------GCGCGAC------------------AGC------AG------------CAG------CA---GC..........................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................CACGACA---TCGGCGC------TAA---CAGCC....................................................................................................................................................................................................................................................................2211.001000000000001000000000000000000000000000000000000000000000000000
.........................C-AAC---------------------------G---------------------------GT----------CACGACA---TCGGCG......................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AGCAACAACAAC---AGGAGGAG----------CA...................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.........................................................G---------------------------GT----------CACGACA---TCGGCGC------TAA---C........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................AAAGCTG--C--CAAC-----------ATAGC---AGC------AG------------..........................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.........................C-AAC---------------------------G---------------------------GT----------CACGACA---TCGGC.......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GG------------------GCGCGAC------------------AGC------AG------------CAG------CA---GCA.........................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCGG------------------GCGCGAC------------------AGC------AG------------C.........................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
............................AC---------------------------G---------------------------GT----------CACGACA---TCGGCGC------TAA---CAGCCA...................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................CAGCGG------------------GCGCGAC------------------AGC------AG------------CAG------C................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................CAGCAACAACAAC---AGGAGGA................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................C-AAC---------------------------G---------------------------GT----------CACGACA---TCGGCGC------TA.............................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCAGCAACAACAAC---AGGAGGAG----------C....................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................AGCAGCGG------------------GCGCGAC------------------AGC------A.......................................................................................................1921.002000000010000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................AGCAGCAACAACAAC---AGGAG..................................................................................................................................................................................2050.402001000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................G------CA---GCAGCAGCAACTG------CAACA....................................................21150.071001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GC---AGC------AG------------CAGCAGCAACAAC.............................................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................AGC------AG------------CAGCAGCAACAAC.............................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATAGC---AGC------AG------------CAGCAGCAAC................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
CCCACCTACTGT------------CC----CATT-----------------------C----------------GCT-AT--CAT--CC-----TTT--------------TGC---------------CCAG-----------------------------C---AAC------AACAGCAGCAACAGCA---------A------CAGCAGCAGCA--ACAA--CAACA------GCAG---------------CAA---------CAGCAACAACAGC------AACAGCA---GCAACAAC------AGCAACAGG--CAGCTGCGGCTGCGGCAG---CGG--------------------------------CAGCGCAGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................AGCAACAGG--CAGCTGCGG............................................................1811.001000100
......................................................................................................................................................................................................................................................................................AGC------AACAGCA---GCAACAAC------AGC.............................................................................21200.153300000
.........................................................................................................................................................................................ACAGCA---------A------CAGCAGCAGCA--ACA........................................................................................................................................................................21200.153000030
..............................................................................................................................................................................................................................AA--CAACA------GCAG---------------CAA---------CAGCAACA...................................................................................................................22200.102200000
..............................................................................................................................................................................................................................................................................GCAACAACAGC------AACAGCA---GCA...........................................................................................21200.102200000
........................................................................................................................................................................................................A------CAGCAGCAGCA--ACAA--CAACA------..........................................................................................................................................................21200.051100000
.............................................................................................................................................................................................CA---------A------CAGCAGCAGCA--ACAA--CAA..................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................ACAA--CAACA------GCAG---------------CAA---------CAGCAAC....................................................................................................................23200.051000010
................................................................................................................................................................................................................................................................CAA---------CAGCAACAACAGC------AACAGCA---GC............................................................................................25200.051100000
................................................................................................................................................................................................................AGCAGCAGCA--ACAA--CAACA------GCAG---------------CA.....................................................................................................................................25200.051100000
......................................................................................................................................................................................................................................A------GCAG---------------CAA---------CAGCAACAACAGC------........................................................................................................21200.051100000
........................................................................................................................................................................C------AACAGCAGCAACAGCA---------A------CAGCAGC.................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................A---------A------CAGCAGCAGCA--ACAA--CAACA------..........................................................................................................................................................22200.051010000
droWil2
AAG--CATTATACCCACCTATTGCCC----CATG--------------------------------------------------C--GA--------------------------TATCAT--------CCC-T---TTC-----------------ATCAGC---AGC------AGCAGCAGCAACAGCA---------G------CAGCAGCAG----------CAACAACAACAGCAG---------------CAG---------CAGCAACAACAAC------AG---CAGCAGCAACAA---------CATC---------------------------------AGGC------------------AGCGCAGCAGGCAGCAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................ACAACAGCAG---------------CAG---------CAGCA......................................................................................................................18200.45900090
....................................................................................................................................................................................................................................................................................ACAAC------AG---CAGCAGCAACA........................................................................................18200.20400040
..................................................................................................................................................................................AGCAGCAACAGCA---------G------CAGCAGCAG----------CA...................................................................................................................................................................25200.10200020
.........................................................................................................................................................................................................................................AACAGCAG---------------CAG---------CAGCAACA...................................................................................................................19200.10200020
.........................................................................................................................................................................................ACAGCA---------G------CAGCAGCAG----------CAAC.................................................................................................................................................................20200.10202000
.....................................................................................................................................................................................................................................CAACAACAGCAG---------------CAG---------CAG........................................................................................................................18200.05100001
....................................................................................................................................................................................................................................................................................ACAAC------AG---CAGCAGCAACAA---------CA............................................................................21200.05101000
.................................................................................................................................................................................................................GCAGCAG----------CAACAACAACAGCAG---------------CAG---------...........................................................................................................................25200.05100010
...............................................................................................................................................................................AGCAGCAGCAACAGCA---------G------CAGCAGC.................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................AG---------------CAG---------CAGCAACAACAAC------AG---CAG................................................................................................23200.05101000
.....................................................................................................................................................................................................................CAG----------CAACAACAACAGCAG---------------C......................................................................................................................................19200.05100010
..........................................................................................................................................................................................................................................ACAGCAG---------------CAG---------CAGCAACAACAAC------AG---CA.................................................................................................27200.05100001
......................................................................................................................................................................................................................................AACAACAGCAG---------------CAG---------CAGCAAC....................................................................................................................21200.05101000
.......................................................................................................................................................................................CAACAGCA---------G------CAGCAGCAG----------CAACAACA.............................................................................................................................................................26200.05100100
................................................................................................................................................................................................................................................G---------------CAG---------CAGCAACAACAAC------AG---CAGCAG.............................................................................................25200.05100010
......................................................................................................................................................................................................................................AACAACAGCAG---------------CAG---------CAGCAACAA..................................................................................................................23200.05100010
...................................................................................................................................................................................................................AGCAG----------CAACAACAACAGCAG---------------CA.....................................................................................................................................22200.05100001
.............................................................................................................................................................................................CA---------G------CAGCAGCAG----------CAACAACA.............................................................................................................................................................20200.05100100
......................................................................................................................................................................................GCAACAGCA---------G------CAGCAGCAG----------C....................................................................................................................................................................20200.05100001
......................................................................................................................................................................................................................AG----------CAACAACAACAGCAG---------------CAG---------CAGCA......................................................................................................................25200.05101000
................................................................................................................................................................................................................AGCAGCAG----------CAACAACAACAGCAG---------------.......................................................................................................................................23200.05101000
............................................................................................................................................................................................................................................................................CAGCAACAACAAC------AG---CAGC...............................................................................................19200.05100010
...............................................................................................................................................................................................................................................................................................AG---CAGCAGCAACAA---------CATC---------------------------------A........................................19200.05100010
.................................................................................................................................................................................................................................................................AG---------CAGCAACAACAAC------AG---CAGCAGCAA..........................................................................................26200.05101000
...................................................................................................................................................................................GCAGCAACAGCA---------G------CAGCAGC.................................................................................................................................................................................20200.05100010
....................................................................................................................................................................................................................................................................................ACAAC------AG---CAGCAGCAACAA---------..............................................................................19200.05100010
.............................................................................................................................................................................................................................................GCAG---------------CAG---------CAGCAACAACAAC------AG---CA.................................................................................................24200.05101000
..........................................................................................................................................................................................................................................ACAGCAG---------------CAG---------CAGCAACAACAAC------A.......................................................................................................24200.05101000
dp5
CGC--CAACGAC---------------------------------------------------------------------------TC--------CACAACA------------------------------------------------------TCTTC---AAC------AACAGCAG------CAAC------AGCAG---CAGCAGCAGCA--ACAA--CAG---------CAG---------------CAAC------AACA---ACA---AC------AACAGCAGCAACAACAA---------CAGCATATGTTGCAC------CAAC---------ATT-------------------------------CGCATCCGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................TATGTTGCAC------CAAC---------ATT-------------------------------CGCATC....2311.0010010000000
............................................................................................................................................................................................................................................................................CA---ACA---AC------AACAGCAGCAACAACAA---------CAGCA.........................................................................2940.2510100000000
.......................................................................................................................................................................................................................GCA--ACAA--CAG---------CAG---------------CAAC------AACA---ACA---A...............................................................................................................2550.2010100000000
...........................................................................................................................................................................................................................................................................ACA---ACA---AC------AACAGCAGCAACA...........................................................................................21200.1020100100000
............................................................................................................................................................................................................................................................................CA---ACA---AC------AACAGCAGCAACAAC.........................................................................................22200.1020011000000
............................................................................................................................................................................................................................................................................CA---ACA---AC------AACAGCAGCAACAACA........................................................................................23200.1020110000000
.............................................................................................................................................................................................................................................................................A---ACA---AC------AACAGCAGCAACAAC.........................................................................................21200.1020110000000
.........................................................................................................................................................................................................................A--ACAA--CAG---------CAG---------------CAAC------AACA---ACA---................................................................................................................22200.1020101000000
..........................................................................................................................................................................................................AG---CAGCAGCAGCA--ACAA--CAG---------CA.......................................................................................................................................................22200.1020200000000
..................................................................................................................................................................................................................................................................AC------AACA---ACA---AC------AACAGCAGC...............................................................................................20200.1020020000000
.......................................................................................................................................................................AC------AACAGCAG------CAAC------AGCAG---CAGCAG..................................................................................................................................................................................25110.0910000100000
..................................................................................................................................................................................................................................................................AC------AACA---ACA---AC------AACAGCAGCAACA...........................................................................................24140.0710000100000
..............................................................................................................................................................................................................................AA--CAG---------CAG---------------CAAC------AACA---ACA---AC------AACA....................................................................................................25190.0510100000000
...................................................................................................................................................................................................................................AG---------CAG---------------CAAC------AACA---ACA---AC------AACAGC..................................................................................................24200.0510010000000
........................................................................................................................................................................................................................CA--ACAA--CAG---------CAG---------------CAAC------AACA---ACA---................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................CAA--CAG---------CAG---------------CAAC------AACA---ACA---AC------AA......................................................................................................24200.0510001000000
..........................................................................................................................................................................................................AG---CAGCAGCAGCA--ACAA--CAG---------CAG---------------.......................................................................................................................................23200.0510000000100
......................................................................................................................................................................................................................AGCA--ACAA--CAG---------CAG---------------CAAC------AACA---......................................................................................................................22200.0510100000000
...................................................................................................................................................................................GCAG------CAAC------AGCAG---CAGCAGCAGC..............................................................................................................................................................................23200.0510000100000
................................................................................................................................................................................................................................................G---------------CAAC------AACA---ACA---AC------AACAGCAG................................................................................................22200.0510100000000
................................................................................................................................................................................................................................................................CAAC------AACA---ACA---AC------AACAGCAGCAA.............................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................................A---AC------AACAGCAGCAACAACAA---------CA............................................................................22200.0510100000000
.......................................................................................................................................................................................................AGCAG---CAGCAGCAGCA--ACAA--CA...................................................................................................................................................................22200.0510000100000
..................................................................................................................................................................C---AAC------AACAGCAG------CAAC------AGCAG---........................................................................................................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................CAGCA--ACAA--CAG---------CAG---------------CAAC------AA...........................................................................................................................21200.0510100000000
......................................................................................................................................................................AAC------AACAGCAG------CAAC------AGCAG---CA......................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................CA---AC------AACAGCAGCAACAACAA---------CA............................................................................23200.0510100000000
.......................................................................................................................................................................................................AGCAG---CAGCAGCAGCA--ACA........................................................................................................................................................................19200.0510000010000
.................................................................................................................................................................................................................GCAGCAGCA--ACAA--CAG---------CAG---------------.......................................................................................................................................19200.0510100000000
..................................................................................................................................................................................................................CAGCAGCA--ACAA--CAG---------CAG---------------CAAC------A............................................................................................................................23200.0510100000000
...............................................................................................................................................................................................................................................................................................AACAGCAGCAACAACAA---------CAGC..........................................................................21200.0510100000000
........................................................................................................................................................................C------AACAGCAG------CAAC------AGCAG---C.......................................................................................................................................................................................19200.0510000100000
...........................................................................................................................................................................................................G---CAGCAGCAGCA--ACAA--CAG---------CA.......................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................G------CAAC------AGCAG---CAGCAGCAGC..............................................................................................................................................................................20200.0510000100000
............................................................................................................................................................................................................................ACAA--CAG---------CAG---------------CAAC------AACA---ACA---................................................................................................................21200.0510100000000
droPer2
CCCACAAGTA---------------CGGAC---------------------------C---------------------------AC----------CGCC----------------------GACGTCCCAGGAG----CAGCAGCA----------------------------GCAGCAG------CAGC------AACAA---CAACAACAA----------CAACAACA------A------------CAACAAC------AA------CAACAGC------AGCAGCA---GCAACAA------CAGCAGC--------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..CACAAGTA---------------CGGAC---------------------------C---------------------------AC----------CGCC----------------------GAC.........................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................CAGGAG----CAGCAGCA----------------------------GCAGCA.................................................................................................................................................................................................................20200.051010000
......................................................................................................................................................................................G------CAGC------AACAA---CAACAACAA----------CAACAA...............................................................................................................................................................25200.051010000
droAna3
CCCACCGGCAGC------------CC-TGC---------------------------C-----------------------------CC--------CACCATC----------------GCTCAGCTCCCAGCAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCAACAGCA--GCAG--CAACA------GTCG------------------CAG------CAGCAGCAGCAGT------CG---CAGCAGCAGCAAC---------A---------GTC-------------------------------------------------------GCAGCAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................CG---CAGCAGCAGCAAC---------A---------GTC-------------------------------------------------------GCA......2211.001001000
...................................................................................................................................................................................................................................AACA------GTCG------------------CAG------CAGCAGCA...................................................................................................................1940.251000001
...................................................................................................................................................................................GCAG------CA---------A------CAGCAACAGCA--GCAG--C....................................................................................................................................................................23200.153120000
...................................................................................................................................AGCAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCA...................................................................................................................................................................................25200.102100001
..............................................................................................................................................GCAGCA-------------------------------GCAG------CA---------A------CAGCAACAGC..............................................................................................................................................................................23200.102010001
.....................................................................................................................................................................................AG------CA---------A------CAGCAACAGCA--GCAG--C....................................................................................................................................................................21200.102010001
......................................................................................................................................................................................................................................A------GTCG------------------CAG------CAGCAGCAGCA................................................................................................................19110.091010000
.....................................................................................................................................................................................................................................CA------GTCG------------------CAG------CAGCAGCAGC.................................................................................................................19110.091000001
....................................................................................................................................GCAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCA...................................................................................................................................................................................24200.051100000
...................................................................................................................................................A-------------------------------GCAG------CA---------A------CAGCAACAGCA--GC.........................................................................................................................................................................21200.051010000
.....................................................................................................................................CAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCAAC.................................................................................................................................................................................25200.051010000
.............................................................................................................................................AGCAGCA-------------------------------GCAG------CA---------A------CAGCAACAGCA--GC.........................................................................................................................................................................27200.051000001
................................................................................................................................................................................................................AGCAACAGCA--GCAG--CAACA------G.........................................................................................................................................................20200.051010000
................................................................................................................................................AGCA-------------------------------GCAG------CA---------A------CAGCAACAGCA--...........................................................................................................................................................................22200.051010000
...............................................................................................................................TCCCAGCAG----CAGCAGCA-------------------------------GCA.................................................................................................................................................................................................................20200.051010000
...................................................................................................................................AGCAG----CAGCAGCA-------------------------------GCAG------CA---------A------CAGCAACA................................................................................................................................................................................28200.051010000
...............................................................................................................................................CAGCA-------------------------------GCAG------CA---------A------CAGCAAC.................................................................................................................................................................................19200.051100000
................................................................................................................................................AGCA-------------------------------GCAG------CA---------A------CAGCAACAGCA--GC.........................................................................................................................................................................24200.051001000
...............................................................................................................................................CAGCA-------------------------------GCAG------CA---------A------CAGCAACAG...............................................................................................................................................................................21200.051000001
...................................................................................................................................................................................GCAG------CA---------A------CAGCAACAGCA--GCAG--CAAC.................................................................................................................................................................26200.051010000
droBip1
TCTATCGCCGCA-------------------------------TCATCACCAGCAACAGCAACC----------------------------------------CCAA------CAGACCGCA-------CACCTG----CAACAGCA------AC----ATCAGCAGC------AG------------CAGC------AGCAAC---A----------------------------GCAGCAGCAGCACCACCTGCAG------------------CAGCAGCAGCA---------------G---CAGCA---CCACCACCAGCAA------CAACAACAACAACATCA-------------------------------TGCCCAGCASizeHit CountTotal NormTotal
No Reads
droKik1
CAGCCA-AAGCA----------------------------------A---------------CAGCAAC-AAATGCC-AT--GAC--TT-----TGA--------------CGT------TGA-------CAGCGG----CAATAGCAACAGCAACA-GCAAC---AGC------AG------------CGGC------AGCAG---CAGCATCTG--CAAC--ATCTGCAACAT------------------CAGCAGCAGCAGCGG------CA---------------------------------------GCAGCAGCGGCAG------CAGCAG---CGGCAACA-------------------------------GCATCTGCASizeHit CountTotal NormTotal
No Reads
droFic1
CAA--CAAGCGC-----------TCC-GAC---------------------------G----------------GCC-GC--CAC--TC-----GGA--------------GG------AGTTCAGCGCCAAGGAG----CAGCAGCA------AC----ACC---ACC------AG------------CAGCAGCAGCAGCAAC---A----------------------------GCAGCAGCAGCAACACC------------AG------CAACAGA------AGGAGCA---------GCAGCAACGCCAGC---------------------------------A-------------------------------GGAGATGCASizeHit CountTotal NormTotal
No Reads
droEle1
ACTGTCCGC--ACGAA---------CGGAT---------------------------C----------------GCC-A-----C--C----------------CCGG------CAATGT------TGCTCCGGGG----CAGCAGCA------TC----A-C---AGT------AT------------CAGCAGCAGCAACAAC---AG----------------------------CAGCAA---------CAACAACAGC---AA------CAGCAGC------AACAACA---------ACAGCAACAGCAGC------------------AAT---------------C------------------AGTGCACAGTGTGTTCATGSizeHit CountTotal NormTotal
No Reads
droRho1
GCATCCGTGGAG-----------------------AGTCCGGAGAATCTGCAGC---G----------------GCACAA--GTC--CC-----TCA--------------CGC--------TGGT---CAAGC-----------------------AGCAGC---AGCAACAACAG------------CAGC------AGCAG---CACCAACAG--CAAC--TACAACT------GCAT------------CAGCAACTGCATCAG------CAACAGC------AG------CAGCAGCAA---CAGCA---GC------------------------------ACCA-------------------------------GCAGCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
CCAACCGAAGAA-----------------------AACGC---TCATCCCCAGCAGTAGCGACT----------------------------------------ACGG------CAATGTGCGCAGTCCCCAGGAG----CCGCAGCA------TC----ACC---AGT------TG------------CAGCAGCAACAGCAAC---A----------------------------GCAGCAGCAGCACAATCAGCAA------------------CAGC------AG------------CAG---------CAGAACA-------------------------------CGTACTACGACTTCAACAGCAAGTGGAACAC---TCCGC-SizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGCACGC------------------GC--------------C-G---------------CAGCCGC-ATCTGCCAACGAGCC--AATACCAT-CC-------------------------------ACAG------C-----------------AGCAAC---AGC------AACAGCAG------CAAC------AGCAG---CAGCAGCAG----------CAACA---------C------------CAGCAGCAGC---AGCA---GCT---GC------AGCAGCAACTGCAGCAG---------CAGCAGATGCTG----------------------------------------CAGATG--------CACCAGCGTCTGSizeHit CountTotal NormTotal
No Reads
droEug1
CCACA--AAGCA----------------AC---------------------------------TGCAACTGATTTTCTAG--GCC--TT-----TAA--------------TGT---------------GCAG-----------------------------------C------AGCAGTCGCCACAGCA---------G------CCGCAGCAGCA--ACAG--CAACA------GCAG------------------C------AGGAGCAGCAGCAGC------CG---CAGCAGCATGGCC---------A---------GTTT------CCGTACCCGGTGGTCCG---------------------------GTAT-CCGGTGCTSizeHit CountTotal NormTotal
No Reads
dm3
CCAGCAAAGCC----------------AA-----------------T----------C----------------AGC-A------GC----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCAGCAGCA---------------GCAGCAGCAGCAACAA----------CAACA------ACAA------------CAACAACAAC---AACA---ACAACAAC------AA---CAACAACAACAA---------CAA---------CAA------CAACAA-------------------------CAGACG--------ACCTATTTGCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................A------GC----------AA---------------CAAAAT---------TCG-C---CGC-----------------AAC.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GC----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACA......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCAG...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AAAT---------TCG-C---CGC-----------------AACAGC---AGC------A.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCA....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................A------CAACAA-------------------------CAGACG--------ACCTATTTGC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................A---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---A................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------A.......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A---------CAA---------CAA------CAACAA-------------------------CAGACG--------A...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AA------CAACAA-------------------------CAGACG--------ACCTATTTGCC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................A---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AG......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAA-------------------------CAGACG--------ACCTATTTGC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................A---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCA....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAA---------CAA---------CAA------CAACAA-------------------------CAGACG--------ACC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAA-------------------------CAGACG--------ACCTATTTG...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................C----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------A.......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................C----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AG...............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................C----------AA---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AG......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................A------GC----------AA---------------CAAAAT---------TCG-C---CGC-----------------..........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCA....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CAAAAT---------TCG-C---CGC-----------------AACAGC---A................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ACAA---------CAA---------CAA------CAACAA-------------------------CAGACG--------ACC.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------AGCA....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................A---------------CAAAAT---------TCG-C---CGC-----------------AACAGC---AGC------........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A------ACAA------------CAACAACAAC---AAC..........................................................................................................................18200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AA----------CAACA------ACAA------------CAACAACAAC---.............................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AACAA----------CAACA------ACAA------------CAACAAC...................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CA---ACAACAAC------AA---CAACAACAAC.........................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CAA------------CAACAACAAC---AACA---ACAACAAC------........................................................................................................25200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................C------AA---CAACAACAACAA---------CAA---------CAA------C........................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAAC------AA---CAACAACAACAA---------CAA---------C.................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CAACAAC------AA---CAACAACAACAA---------C.............................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAACA------ACAA------------CAACAACAAC---AACA---AC....................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CA------ACAA------------CAACAACAAC---AACA---ACAAC.................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAACAACAACAA---------CAA---------CAA------CAAC.....................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CAACAACAA---------CAA---------CAA------CAACAA-------------------------C.........................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAACA------ACAA------------CAACAACAAC---AACA---ACA...................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACAACAACAA---------CAA---------CAA------CAACAA-------------------------C.........................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AAC------AA---CAACAACAACAA---------CAA---------CAA------CA.......................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AACAACAACAA---------CAA---------CAA------CAACAA-------------------------CA........................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................C-----------------AACAGC---AGC------AGCAGCAGCA---------------G..............................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.........................................................................................................................................................................................................CAGCAGCAGCAACAA----------CAACA------ACA.......................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000010000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CA------ACAA------------CAACAACAAC---AACA---ACAACA................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CAA----------CAACA------ACAA------------CAACAACAAC---AACA---......................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AA---CAACAACAACAA---------CAA---------CAA------CAACA....................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGC-----------------AACAGC---AGC------AGCAGCAGCA---------------GCAGC..........................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................C---CGC-----------------AACAGC---AGC------AGCAGCAG................................................................................................................................................................................................................21150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................ACAAC---AACA---ACAACAAC------AA---CAA................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAC---AACA---ACAACAAC------AA---CAACAACAACA........................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GCAGCAGCA---------------GCAGCAGCAGCA...................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACAACAAC---AACA---ACAACAAC------AA---...................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CAGCAGCAACAA----------CAACA------ACAA------------C.........................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAAC---AACA---ACAACAAC------AA---CAACAACA...........................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AA------------CAACAACAAC---AACA---ACAACAAC------AA---CA.................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
CCGAGTAGTT---------------T-AGC---------------------------C---------------------------GC----------TGCCGCG---TCC-----------------------G---TGC-----------------TGCAAC---AGC------AGCAGCAGCAAC------------AGCAG---CAGCAGCAA----------CAACAACAT------------------CAGCAGC---------A---------GC------A---------------A---CAGCA---CCACCAGCAGCTG------CACCACA----------CACA--------CCCACAGT--------CACCCGCCCACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................CACCAGCAGCTG------CACCAC...................................................1821.00200000200000000000
....................................................................................................................................................................................................................................ACAACAT------------------CAGCAGC---------A---------G...............................................................................................................16140.07100000000001000000
droSec2
CCAACCGAAGAA-----------------------AACGC---TCATCCCCAGTAGCAGCGACT----------------------------------------ACGG------CAATGTGCGCAGTCCCCAGGAG----CCGCAGCA------TC----ATC---AGT------TG------------CAGCAGCAACAGCAAC---A----------------------------ACAACAGCAGCACAATCAGCAA------------------CAGC------AG------------CAA---------CAGAACA-------------------------------CGTACTACGACTTCAATA---------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................AGCGACT----------------------------------------ACGG------CAATGTGCGCA..........................................................................................................................................................................................................................................................................2211.0010010
............................................CATCCCCAGTAGCAGCGA.........................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................AACAGCAAC---A----------------------------ACAACAGCAG................................................................................................................................................20160.0610010
droYak3
GCCAAGTAGT--------------TT-AGC---------------------------C---------------------------GC----------TGCCGCG---TCC-----------------------G---TGC-----------------TGCAGC---AGC------ACCAGCAGCAAC------------AGCAG---CAGCAGCAG----------CAACAACAT------------------CAGCAGC------AGCAG------------------------------CAA---CAGCA---CCACCAGCAGCTG------CACCACA----------CACA--------CCCACAGT--------CACCCGCCCACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................GCAG----------CAACAACAT------------------CAGCAGC------AGCAG------------------------------C.........................................................................................2640.25101000000000
..................................................................................................................................................................................................................................CAACAACAT------------------CAGCAGC------AGC..........................................................................................................................19160.25401110100000
................................................................................................................................................................................................................AGCAGCAG----------CAACAACAT------------------CAGCAGC------A............................................................................................................................2560.17101000000000
......................................................................................................................................................................................................................AG----------CAACAACAT------------------CAGCAGC------AGCAG------------------------------CA........................................................................................2580.13101000000000
..........................................................................................................................................................................................................AG---CAGCAGCAG----------CAACAACAT------------------CAGCA.....................................................................................................................................2590.11101000000000
................................................................................................................................................................................CCAGCAGCAAC------------AGCAG---CAGCAGCAG----------C....................................................................................................................................................................26100.10101000000000
..................................................................................................................................................................................................................................CAACAACAT------------------CAGCAGC------AGCAG------------------------------C.........................................................................................22110.09100000010000
...................................................................................................................................................................................................................................AACAACAT------------------CAGCAGC------AGCA.........................................................................................................................19180.06101000000000
.................................................................................................................................................................................CAGCAGCAAC------------AGCAG---CAGCAG..................................................................................................................................................................................21200.05101000000000
..........................................................................................................................................................................................................................................T------------------CAGCAGC------AGCAG------------------------------CAA---CAGCA---............................................................................21200.05101000000000
..................................................................................................................................................................................................................................CAACAACAT------------------CAGCAGC------AG...........................................................................................................................18200.05100000100000
.....................................................................................................................................................................................AGCAAC------------AGCAG---CAGCAGCAG----------CAACA................................................................................................................................................................25200.05101000000000
...............................................................................................................................................................................ACCAGCAGCAAC------------AGCAG---CA......................................................................................................................................................................................19200.05101000000000
..............................................................................................................................................................................................................................................................AGCAGC------AGCAG------------------------------CAA---CAGCA---CCC.........................................................................22200.05100000100000
droEre2
CCGGCCAAGCAT----------------GCCACCGAGCAC---GCGACCACAACAACACGGGCG---------------------AC----------AA---------------CAACGT---------CCA-G---TAC-----------------GACAAC---AGC------AGCAGCAGCAGC------------AGCAG---CAGCAACAG----------CAGCAACAG------------------CAGCAGCACC---AG---------------------------------CAA---------CAACACACGCAGCAG------CAAC---------ATCG-------------------------------GCCAAAGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................CAC---GCGACCACAACAACAC............................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................................................................................................................................................................................AGCAGCAGC------------AGCAG---CAGCA...................................................................................................................................................................................19200.2550000050
................................................................................................................................................................AAC---AGC------AGCAGCAGCAGC------------A...............................................................................................................................................................................................19200.2040004000
......................................................................................................................................................................................................................AG----------CAGCAACAG------------------CAGCAGCACC---A............................................................................................................................22120.0810001000
...........................................................................................................................................................................................................G---CAGCAACAG----------CAGCAACAG------------------CAGCAGC...................................................................................................................................26200.0510100000
..........................................................................................................................................................................................................AG---CAGCAACAG----------CAGCAACAG------------------CAGCAG....................................................................................................................................26200.0511000000
...........................................................................................................................................................................................................G---CAGCAACAG----------CAGCAACAG------------------CAGCA.....................................................................................................................................24200.0510000100

Generated: 05/17/2015 at 09:59 PM