dgr_72

TAACGTTCTATTGTTTTCAAGAGATGATTATTATTTTCCTCGTAGTGTAAGCGTACTGGGCCCATAACCTGTTGGAGATTTGGGGTTATGGGTGCAGGCTTACTGATTGAAACATGATCATTAATAACACGAGGAGTTTTCTTTAGAGGTTA *********************************....(((....((((((...(((.(((((((((((............))))))))))).)))))))))....))).......*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
................................................AAGCGTACTGGGCCCATAAC....................................................................................	20	0	4	0.50	2	1	1
.................................................AGCGTACTGGGCCCATAACC...................................................................................	20	0	4	0.25	1	1	0
..................................................GCGTACTGGGCCCATAAC....................................................................................	18	0	4	0.25	1	1	0
................................................AAGCGTACTGGGCCCATA......................................................................................	18	0	4	0.25	1	1	0
..................................................GCGTACTGGGCCCATAACC...................................................................................	19	0	4	0.25	1	0	1
...................................................CGTACTGGGCCCATAACC...................................................................................	18	0	4	0.25	1	1	0
.................................................AGCGTACTGGGCCCATAAC....................................................................................	19	0	4	0.25	1	0	1
................................................AAGCGTACTGGGCCCATAA.....................................................................................	19	0	4	0.25	1	0	1
...............................................TAAGCGTGCTGGGCCCATA......................................................................................	19	1	20	0.05	1	1	0
.................................................AGCGTTCTGGGCCCATAAC....................................................................................	19	1	20	0.05	1	0	1
.................................................AGCGTTCTGGGCCCATAACC...................................................................................	20	1	20	0.05	1	1	0

Species	Coordinate	ID	Alignment
droGri2	scaffold_14355:13-164 +	dgr_72	TAA--CGTT-CTA-TTGTTTTCAAG---AGATGA-TTATTATTTTCCTCGTAGTGTAAGCGTACTGGGCCCATAACCTGTTGGAG--ATTTGGGGTTATGGGTGCAGGCTTACTGATTGAAACATG-------------------ATCATTAATAACACGAGGAGTTTTCTTTA---------------------------GAGGTTA
droVir3	scaffold_13324:1068015-1068162 -		AAT--T--CTTTGGCGAATGCCAAT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAGTGGCTTGCGTCTTGCAATTCTCGCATTGTACCCAGC-------------------CTTGTGTAGTACCCGCCGTACCGGTTTGGAGTGA-ATTTCTTTCCCAGTCTCTTCTTTAACCT
droMoj3	scaffold_6500:32087548-32087692 -		AGT--GCTCCTCGGCAAATTTTTGG---CGACAC-TTCTTTATTT------------------------------TAT--CGCTTATAAAAGGCTTCTTGCGTGGTACTCTGTTATTAAAGTCATG-------------------TTCCCGAAGCATACGGCGAATAGTTTCTGGGTGGCATGACTTGCCAACTCC-TCCT-----TG
droWil2	scf2_1100000004949:366025-366160 -		AAGAGAGTCGGCTTTG---------------------GACATTTT------------------------------TTT--TTGAAATGAATGGCTTCTTTCGAGCTACTCGACCGTTAAAATCATG-------------------GTCGCGCAGCACACGTCGCACAGTTTCTGCGCTCGACGCCTTGCCCAGTTCATCCTCCACCTC
dp5	Unknown_group_667:4509-4621 -		GAA---TTCATTGGCGAAATCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTTTCCTGCGAGCAACTCGGCCATGAAACCCCGC-------------------CTTTCTCCAAGTGCGTCGGACAGTTT-------------------------------------
droPer2	scaffold_10:499461-499581 -		AATGTATTCATTGGCGAAATCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTTTCCTGCGAGCAACTCGGCCATGAAACCCTGC-------------------CTTTCTCCAAGTGCGTCGGACAGTTTCTTCA--------------------------------
droAna3	scaffold_12984:445729-445867 -		AAT--GCTCATTCGAAAATTTTAAC---CGAGCC-GCTATATTCT------------------------------TCT--TACTAATGAAGGGCTTCTTCCGTGCTACACGACCATAAAAGTTGTG-------------------ATCGTGTAGCACGCGGCGCACCGTATCAGCACTGCACTTTTCCCCCATTTC------------
droBip1	scf7180000391445:2110-2260 -		TAT--GGTCCATGGCGAATTTTAAT---CTTGCC-TTCTGGTTTT------------------------------TTG--CACTAATGAAAGGCTTCTTTCGTGCAATTCGACCATTAAACCCCTG-------------------GCTGTGCAGAACTCGTCGGATGGTGTCTGGGTGGCAAGACTTGCCCAGCTCTGTCTCCACTTG
droKik1	scf7180000302446:8212-8362 -		CAT--GCTCCTTGACAAATTTAAGC---CTGCAC-TTTTGATTTT------------------------------TAT--CGTTGATGAAGGGCTTTTTCCGAGCTACTCGGCCATTAAAGTTATG-------------------TTCCCGCAATACCCGGCGGACGGTCTCCACGGAACATTTTTTGCCCAATTCCTTTTCCACATC
droFic1	scf7180000452016:14820-14972 -		AATGTGCTCCTTTGTGAACTTTAGA---CGAGCA-GCAATATTCT------------------------------TCG--TACTGATGAATGGCTTCTTCCGTGCTACTCGACCATTAAAGTTGTT-------------------ATTTTGCAGCACACGACGCACCGTAGCAGGACTACACTGTTTTCCCATTTCGTCCTCGACCTC
droEle1	scf7180000487404:1981-2119 -		AGT--A-----------ATTTTAGG---CGAGCAGAAATTATTTT------------------------------TGT--TGCTGATAAATGGCTTTTTCCGTGCAACTCGGTCGTTAAAGTTGTG-------------------ATCATGCAA--CACGGCGCACTGCATCAGCACTACACTTTTGGCCCCCATCTTCCTCGACCTG
droRho1	scf7180000777524:21022-21170 -		TGT--GTTCCTTTGCGAACTTTAAG---CGGCTG-GCTCTATTT-------------------------------TTT--TATTTATTAACGGCTTCTTGCGAGCAACTCGGCCATTAAAATCATG-------------------TTCCCTTAAAACACGTCGGACTGTTTCCGTGCTAAATTTTTGGCCGGTTATGTCCTGCA-TTT
droBia1	scf7180000302261:1324552-1324704 -		TATGTGTTGCTTTGTAAACTTTAGC---CGAGCA-GCAATATTTT------------------------------TCT--TGCTGATAAAGGGCTTCTTCCGTGCTACTCGACCATTGAAGTTATG-------------------ATCGTGCAGCACACGACGCACCGTATCAGGACTACACTTCTTGCCCATTTCGTCCTCGACCTC
droTak1	scf7180000415858:295259-295322 -		TGG--T-GGCTTG-GAAATGTGGTCCTTTGATGT-GGTCGATTTG------------------------------TTT--TTGAAATATAGGGCTTCTTTC-----------------------------------------------------------------------------------------------------------
droEug1	scf7180000409184:46944-47093 -		AA---GTTCCCTGGCGAATTTGACG---CGCGCC-AACTTATTTT------------------------------TAG--CACTTATAAAGGGCTTTTTTCTAGGAACTCGACCATTAAAGTTATG-------------------GTTCTGTAAAATGTTCCGAACTGTACCTGGGCAACATTTTTTGCCCATTTCGTTCTCGATCTC
droYak3	2L:21027401-21027516 -		AAT--GCTTTTTAGCAAACTTTTAA---CGTGCC-TTAATGTTTT------------------------------GAG--CACTTATAAATGCTTTCTTACGTGCAGTTTTATCATTTAAATCATG-------------------CTCACGGAGCACACGCCGAATTGTTTCC-----------------------------------
droEre2	scaffold_4512:450138-450306 -		TGT--GCTCCTTTGAGAATTTTATC---TTAGCA-GCTCTATTTT------------------------------TTT--GGCTTATGAAAGGCTTCTTTCGTAATACTCGACCATAAAAATAATGGTATAAAAATACCATAATGATCATGTAATACAAGGCACACTGTATCATGACTAT-CTTCTTGCCCATTTCGTCCTTGATCTG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

TAA--CGTT-CTA-TTGTTTTCAAG---AGATGA-TTATTATTTTCCTCGTAGTGTAAGCGTACTGGGCCCATAACCTGTTGGAG--ATTTGGGGTTATGGGTGCAGGCTTACTGATTGAAACATG-------------------ATCATTAATAACACGAGGAGTTTTCTTTA---------------------------GAGGTTA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................AAGCGTACTGGGCCCATAAC....................................................................................................................................	20	4	0.50	2	1	1
.........................................................AGCGTACTGGGCCCATAACC...................................................................................................................................	20	4	0.25	1	1	0
..........................................................GCGTACTGGGCCCATAAC....................................................................................................................................	18	4	0.25	1	1	0
........................................................AAGCGTACTGGGCCCATA......................................................................................................................................	18	4	0.25	1	1	0
..........................................................GCGTACTGGGCCCATAACC...................................................................................................................................	19	4	0.25	1	0	1
...........................................................CGTACTGGGCCCATAACC...................................................................................................................................	18	4	0.25	1	1	0
.........................................................AGCGTACTGGGCCCATAAC....................................................................................................................................	19	4	0.25	1	0	1
........................................................AAGCGTACTGGGCCCATAA.....................................................................................................................................	19	4	0.25	1	0	1

droVir3

AAT--T--CTTTGGCGAATGCCAAT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAGTGGCTTGCGTCTTGCAATTCTCGCATTGTACCCAGC-------------------CTTGTGTAGTACCCGCCGTACCGGTTTGGAGTGA-ATTTCTTTCCCAGTCTCTTCTTTAACCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCT..........	27	13	232.92	3028	0	0	43	4	82	16	105	0	4	1	10	5	55	5	0	1	0	0	0	1	13	0	3	72	116	176	467	385	106	39	15	61	282	5	68	386	227	202	45	24	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTC...........	26	13	231.77	3013	0	0	39	1	70	21	122	3	5	5	6	1	13	7	0	0	0	0	0	0	30	0	0	70	129	169	358	325	89	52	39	110	299	19	95	327	267	210	97	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTAG......................................................	28	13	81.00	1053	0	0	166	0	31	0	35	0	0	0	0	2	26	2	0	0	0	0	0	0	0	0	0	7	55	79	108	7	34	13	12	8	133	1	32	147	13	113	25	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAA..........................................................................................................................	26	13	61.31	797	0	0	54	0	13	0	10	0	2	1	0	0	0	0	0	0	0	1	0	0	1	0	0	9	48	52	91	79	24	17	8	16	99	0	26	162	17	59	7	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTA.......................................................	27	13	40.77	530	0	0	38	5	12	0	12	0	0	0	0	0	8	0	0	0	0	0	0	0	14	0	0	12	23	48	49	9	23	3	6	8	83	1	20	71	1	62	14	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGT........................................................	26	13	37.54	488	0	0	108	13	24	0	6	0	1	0	0	5	10	0	0	0	0	0	0	0	3	0	0	20	31	24	40	4	27	18	6	2	36	1	12	27	1	48	13	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTG.........................................................	25	13	33.85	440	1	0	97	9	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	6	37	36	62	8	29	11	7	6	44	0	10	29	2	33	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGT..........................................................	24	13	18.46	240	0	0	65	0	6	2	4	0	0	0	0	1	1	0	0	0	0	0	0	0	4	0	0	8	9	14	18	4	14	6	3	3	21	2	5	11	0	26	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTAG......................................................	27	13	16.15	210	0	0	39	0	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	3	70	0	1	0	20	0	1	6	0	57	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAGTCTC...........	27	13	15.46	201	0	0	0	0	5	0	7	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	7	11	15	23	29	2	0	0	0	27	0	10	39	0	22	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCT............	25	13	14.69	191	0	0	7	5	4	1	13	0	2	0	2	1	3	1	0	0	0	0	0	0	1	0	0	8	10	11	16	15	10	11	3	6	15	1	3	14	7	8	7	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	3
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTC.............	24	13	14.31	186	0	0	13	0	13	2	19	0	1	0	5	0	1	1	0	0	0	0	0	0	1	0	0	6	7	8	20	14	3	3	1	3	10	5	5	10	11	6	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGA............................................................................................................................	24	13	14.15	184	0	0	11	0	6	6	9	1	2	0	2	0	0	1	0	0	0	0	0	0	4	0	0	6	4	4	15	16	3	5	2	3	16	0	8	23	13	9	12	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAGTCTCT..........	28	13	12.85	167	0	0	1	0	7	0	8	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	1	6	18	33	18	0	0	0	0	23	0	8	24	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTA.......................................................	26	13	11.62	151	0	0	11	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	51	1	0	0	22	1	0	5	1	50	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTG...........................................................	23	13	10.85	141	0	0	36	0	4	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	3	0	0	2	11	10	15	4	10	9	2	1	5	1	1	2	1	6	11	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGT..............	23	13	10.31	134	0	0	6	0	2	1	28	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	7	5	5	16	8	1	1	0	1	5	1	3	11	10	7	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTAGT.....................................................	29	13	9.23	120	0	0	28	2	0	0	5	0	0	0	0	2	61	2	0	0	0	0	0	0	0	0	0	0	0	2	4	1	0	0	0	0	1	0	1	2	1	6	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAA...........................................................................................................................	25	13	7.85	102	0	0	10	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	7	2	13	8	6	1	0	0	10	0	1	17	7	7	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGT........................................................	25	13	5.38	70	0	0	24	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	18	1	0	0	9	0	0	2	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	28	12	5.33	64	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	5	7	5	2	2	2	8	0	1	14	1	8	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTG.........................................................	24	13	4.54	59	0	0	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	12	0	0	0	4	1	0	1	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTAGT.....................................................	28	13	4.46	58	0	0	5	0	2	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	28	0	0	0	4	0	0	0	1	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCC.................	20	13	4.31	56	0	0	2	1	4	3	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	0	8	3	0	0	0	0	4	0	0	9	4	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCG.............................................................................................................................	23	13	3.92	51	1	0	2	0	5	0	2	0	0	2	0	0	1	0	0	0	0	0	0	0	1	0	0	7	4	2	1	2	1	2	0	3	0	1	0	1	6	1	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAAT.........................................................................................................................	27	13	3.46	45	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	6	5	2	0	0	2	7	0	2	8	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAGTC.............	25	13	3.31	43	0	0	1	0	1	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	5	7	1	0	0	0	2	0	2	4	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCA................	21	13	3.31	43	0	0	5	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	3	6	1	0	0	0	1	1	0	0	5	2	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAA..........................................................................................................................	27	13	3.00	39	0	0	35	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCC..................	19	13	2.54	33	0	0	0	0	4	1	7	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	3	1	0	1	0	0	1	0	0	2	0	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAG...............	22	13	2.38	31	0	0	4	0	7	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	3	2	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTT............................................................	22	13	2.38	31	0	0	12	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	3	1	1	0	0	0	2	0	2	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTAG......................................................	25	14	1.71	24	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	1	1	1	2	2	0	1	2	0	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTC...................	18	13	1.69	22	0	0	0	0	2	1	7	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	0	0	0	0	0	0	2	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGA............................................................................................................................	25	13	1.69	22	0	0	14	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TC-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	25	12	1.58	19	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	2	1	4	0	1	1	3	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAGT.....................................................................................................................	29	12	1.58	19	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	1	2	0	1	2	0	0	3	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTC.......................................................	27	13	1.46	19	1	0	6	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	2	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCTT.........	28	13	1.46	19	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	4	0	0	2	0	2	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CT.............................................................	21	14	1.43	20	1	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	2	0	3	1	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAGTCT............	26	13	1.38	18	0	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	3	1	2	0	1	0	0	0	1	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTG...........................................................	22	13	1.31	17	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	2	0	6	0	0	0	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGGAGTGA-ATTTCTTTCCCAGTCTC...........	25	13	1.23	16	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	1	0	0	1	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCTTC........	29	13	1.15	15	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAG......................................................	20	14	1.14	16	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	3	0	0	0	0	0	1	0	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGGAGTGA-ATTTCTTTCCCAGTCTCT..........	26	13	1.00	13	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	1	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTAGT.....................................................	26	14	0.93	13	0	0	0	0	2	1	1	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTAGA.....................................................	28	13	0.85	11	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGT..........................................................	23	13	0.85	11	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAATG........................................................................................................................	28	12	0.83	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	1	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------...............................................................	19	15	0.80	12	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	3	0	0	0	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCC..........	27	13	0.77	10	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TTC-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	26	12	0.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................C-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	24	12	0.67	8	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------C..............................................................	20	14	0.64	9	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................ATTCTCGCATTGTACCCAGC-------------------CTTG...........................................................	24	13	0.62	8	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTCGCATTGTACCCAGC-------------------CTTGTGTAG......................................................	26	13	0.62	8	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCA................	22	13	0.62	8	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TC-GATTGGTTAA------------------------------CAC--TCGAAATGAGT.....................................................................................................................	26	12	0.58	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AATTCTCGCATTGTACCCAGC-------------------CTTG...........................................................	25	13	0.54	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--T...............................................................................................................................	21	13	0.54	7	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAGTACCCGC...............................................	27	12	0.50	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TACCGGTTTGGAGTGA-ATTTCTTTC...................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TACCGGTTTGGAGTGA-ATTTCTT.....................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TACCGGTTTGGAGTGA-ATTTCTTTCC..................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................GGTTTGGAGTGA-ATTTCTTTCC..................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTC.........................................................	25	13	0.46	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATTGTACCCAGC-------------------CTTGTGTAGTACCC.................................................	26	13	0.46	6	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AT---CTCTTC-GATTGGTTAA------------------------------CAC--TCG.............................................................................................................................	24	13	0.46	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAGT..............	24	13	0.46	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AT---CTCTTC-GATTGGTTAA------------------------------CAC--TC..............................................................................................................................	23	13	0.46	6	0	0	4	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTA.......................................................	24	14	0.43	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGA.......................................................................................................................	29	12	0.42	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................CAAT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGA............................................................................................................................	27	13	0.38	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TGCGTCTTGCAATTCTCGCATTGTACC......................................................................................	27	13	0.38	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTT...........	26	13	0.38	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCTC.........	28	13	0.38	5	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTAG........................................................	26	13	0.38	5	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAGTACCC.................................................	25	13	0.38	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................A-ATTTCTTTCCCAGTCTCT..........	19	13	0.38	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
..................................................................................................................ATTGTACCCAGC-------------------CTTGTGTAG......................................................	21	14	0.36	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................CGCATTGTACCCAGC-------------------CTTGTGTAGT.....................................................	25	14	0.36	5	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTT.......................................................	27	13	0.31	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AATTCTCGCATTGTACCCAGC-------------------CTTGT..........................................................	26	13	0.31	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................ATTCTCGCATTGTACCCAGC-------------------CTTGTG.........................................................	26	13	0.31	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TGA-ATTTCTTTCCCAGTCTCT..........	21	13	0.31	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTA...........	26	13	0.31	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGC........................................................	26	13	0.31	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TGCGTCTTGCAATTCTCGCATTGTA........................................................................................	25	13	0.31	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTCC........................................................	26	13	0.31	4	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTCC......................................................	28	13	0.31	4	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCC.................	21	13	0.31	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAA..........................................................................................................................	25	13	0.31	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAA...........................................................................................................................	26	13	0.31	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................ATTCTCGCATTGTACCCAGC-------------------CTTGT..........................................................	25	13	0.23	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TACCCAGC-------------------CTTGTGTAGTACC..................................................	21	13	0.23	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCTA.........	28	13	0.23	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TGCAATTCTCGCATTGTACCCAGC-------------------CTTG...........................................................	28	13	0.23	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTCGCATTGTACCCAGC-------------------CTTGTGTAGT.....................................................	27	13	0.23	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGGAGTGA-ATTTCTTTCCCAGTC.............	23	13	0.23	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTCCCAG...............	23	13	0.23	3	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTCGCATTGTACCCAGC-------------------CTTGTGTA.......................................................	25	13	0.23	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................GGAGTGA-ATTTCTTTCCCAGTCTC...........	24	13	0.23	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTT............................................................	21	13	0.23	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AAT---CTCTTC-GATTGGTTAA------------------------------CAC--TCGA............................................................................................................................	26	13	0.23	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TC..............................................................................................................................	22	13	0.23	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTTC...................	19	13	0.23	3	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAGTACCCGCC..............................................	28	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGC-------------------CTTGTGTAGTACCCGCCGTACC.........................................	25	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	27	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAGTACCCG................................................	26	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	29	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TCTTC-GATTGGTTAA------------------------------CAC--TCG.............................................................................................................................	21	13	0.15	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AATTCTCGCATTGTACCCAGC-------------------CTT............................................................	24	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CCAAT---CTCTTC-GATTGGTTAA------------------------------CAC--................................................................................................................................	24	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
....................................................................................................................................................................................ATTTCTTTCCCAGTCTCT..........	18	13	0.15	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAAA.........................................................................................................................	27	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTG.......................................................	27	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTCGCATTGTACCCAGC-------------------CTTGTGT........................................................	24	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TTCTTTCCCAGTCTCTTCTTTAACCT	26	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GCCAAT---CTCTTC-GATTGGTTAA------------------------------CAC--................................................................................................................................	25	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.............................TCTTC-GATTGGTTAA------------------------------CAC--TCGAAA..........................................................................................................................	24	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTCA..........	27	13	0.15	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGC............................................................................................................................	24	13	0.15	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTAGA.....................................................	29	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCA............	25	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAAC..........................................................................................................................	26	13	0.15	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTAGTA....................................................	27	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCC................	21	13	0.15	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTAGTAC...................................................	28	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GAGTGA-ATTTCTTTCCCAGTCTCT..........	24	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTC.......................................................	26	13	0.15	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GATTGGTTAA------------------------------CAC--TCGAAA..........................................................................................................................	19	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AGTGA-ATTTCTTTCCCAGTCTCT..........	23	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTT.............	24	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................GGAGTGA-ATTTCTTTCCCAGTCTCT..........	25	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGGAGTGA-ATTTCTTT....................	18	13	0.15	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................CAATTCTCGCATTGTACCCAGC-------------------CTTG...........................................................	26	13	0.15	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CA...................................................................................................................................	19	13	0.15	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................T---CTCTTC-GATTGGTTAA------------------------------CAC--TCGAC...........................................................................................................................	25	13	0.15	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGGAGTGA-ATTTCTTTCCCAGTCTCTT.........	27	13	0.15	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TTGCGTCTTGCAATTCTCGCATTGTACCC.....................................................................................	29	13	0.15	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................CGCATTGTACCCAGC-------------------CTTGTGTAGTAC...................................................	27	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGGAGTGA-ATTTCTTTCCCAGTCTTAA.........	28	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TGCAATTCTCGCATTGTACCCAGC-------------------CTT............................................................	27	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTC...........................................................	23	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTAT......................................................	28	14	0.14	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTACCCAGC-------------------CTTGTGTAGT.....................................................	21	14	0.14	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TCGCATTGTACCCAGC-------------------CTTGTGTC.......................................................	24	14	0.14	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTATC.....................................................	29	14	0.14	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................GCATTGTACCCAGC-------------------CTTGTGTAG......................................................	23	14	0.14	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CTTGTGTAA......................................................	27	14	0.14	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GGCGAATGCCAAT---CTCTTC-GATTGGT......................................................................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCGCATTGTACCCAGC-------------------CT.............................................................	20	14	0.14	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TACCCAGC-------------------CTTGTGTAGTACCCGCC..............................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTACCCAGC-------------------CTTGTGTAGTACCCGCCGTA...........................................	29	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...................................................................................................................................................TGTGTAGTACCCGCCGTAC..........................................	19	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ACCCAGC-------------------CTTGTGTAGTACCCGCCG.............................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GC-------------------CTTGTGTAGTACCCGCCGTA...........................................	22	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGC-------------------CTTGTGTAGTACCCGCCGTACCT........................................	26	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................ATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	22	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GATTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	23	12	0.08	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ACCCAGC-------------------CTTGTGTAGTACCCGC...............................................	23	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................C-GATTGGTTAA------------------------------CAC--TCGAAATGAGT.....................................................................................................................	25	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................CATTGTACCCAGC-------------------CTTGTGTAGTACCCG................................................	28	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TACCCAGC-------------------CTTGTGTAGTACCCG................................................	23	12	0.08	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TTC-GATTGGTTAA------------------------------CAC--TCGAAATGAGTC....................................................................................................................	28	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................TTGGTTAA------------------------------CAC--TCGAAATGAG......................................................................................................................	21	12	0.08	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTACCCAGC-------------------CTTGTGTAGTACCCGC...............................................	26	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TTCTCGCATTGTACCCAGC-------------------CTTGTGTAGTACCCGCCT.............................................	37	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.....................................TTGGTTAA------------------------------CAC--TCGAAATGAGTGG...................................................................................................................	24	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TGA-ATTTCTTTCCCAGTCTC...........	20	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AGT--GCTCCTCGGCAAATTTTTGG---CGACAC-TTCTTTATTT------------------------------TAT--CGCTTATAAAAGGCTTCTTGCGTGGTACTCTGTTATTAAAGTCATG-------------------TTCCCGAAGCATACGGCGAATAGTTTCTGGGTGGCATGACTTGCCAACTCC-TCCT-----TG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACTTGC...................	24	4	10.50	42	33	1	0	0	6	2
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACTTG....................	23	4	8.75	35	33	0	0	0	2	0
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACTTGCC..................	25	2	5.50	11	7	0	0	0	4	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTGGCA...........................	25	3	3.00	9	9	0	0	0	0	0
......................................................................................................................................................................AGTTTCTGGGTGGCATGACTTGC...................	23	4	1.25	5	5	0	0	0	0	0
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACTTGCCAA................	27	2	1.00	2	1	1	0	0	0	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTGGC............................	24	3	0.67	2	2	0	0	0	0	0
......................................................................................................................................................................AGTTTCTGGGTGGCATGACTTGCCAA................	26	2	0.50	1	1	0	0	0	0	0
......................................................................................................................................................................AGTTTCTGGGTGGCATGACTTGCC..................	24	2	0.50	1	0	0	0	0	1	0
........................................................................................................................................................................TTTCTGGGTGGCATGACTTGCCA.................	23	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................GCGAATAGTTTCTGGGTGGCATGAC.......................	25	4	0.50	2	1	0	0	0	1	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTG..............................	22	3	0.33	1	1	0	0	0	0	0
..........................................................................................AGGCTTCTTGCGTGGTACTC..................................................................................................	20	3	0.33	1	0	0	0	0	1	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTGGCG...........................	25	3	0.33	1	1	0	0	0	0	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTGGCATG.........................	27	3	0.33	1	1	0	0	0	0	0
.....................................................................................................................AAAGTCATG-------------------TTCCCGAAG......................................................	18	3	0.33	1	1	0	0	0	0	0
............................................................................................................................................................TACGGCGAATAGTTTCTGGGTGGCAA..........................	26	3	0.33	1	1	0	0	0	0	0
.............................................................................................................................................................ACGGCGAATAGTTTCTGGGTGGCA...........................	24	4	0.25	1	1	0	0	0	0	0
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACT......................	21	4	0.25	1	1	0	0	0	0	0
........................................................................................................................................................................TTTCTGGGTGGCATGACTTGC...................	21	4	0.25	1	0	0	0	0	1	0
.............................................................................................................................................................ACGGCGAATAGTTTCTGGGTGGC............................	23	4	0.25	1	1	0	0	0	0	0
..............................................................................................................................................................CGGCGAATAGTTTCTGGGTGGCA...........................	23	4	0.25	1	1	0	0	0	0	0
......................................................................................................................................................................AGTTTCTGGGTGGCATGACTTG....................	22	4	0.25	1	1	0	0	0	0	0
...............................................................................................................................................................GGCGAATAGTTTCTGGGTGGCATGACT......................	27	4	0.25	1	0	0	0	0	1	0
....................................................................................................................................................................ATAGTTTCTGGGTGGCATGACT......................	22	4	0.25	1	0	0	0	0	1	0
.....................................................................................................................................................................TAGTTTCTGGGTGGCATGACTTGG...................	24	4	0.25	1	1	0	0	0	0	0
........................................................................................................................................................................TTTCTGGGTGGCATGACTTG....................	20	4	0.25	1	0	1	0	0	0	0

droWil2

AAGAGAGTCGGCTTTG---------------------GACATTTT------------------------------TTT--TTGAAATGAATGGCTTCTTTCGAGCTACTCGACCGTTAAAATCATG-------------------GTCGCGCAGCACACGTCGCACAGTTTCTGCGCTCGACGCCTTGCCCAGTTCATCCTCCACCTC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....................................................................................................................TAAAATCATG-------------------GTCGCGCAGCACACGT...............................................	26	3	8.33	25	0	12	0	12	1
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCT......................	23	4	7.25	29	0	12	0	17	0
.................................................................................................................................................................CGCACAGTTTCTGCGCTCGACGCCT......................	25	4	4.50	18	1	10	0	7	0
..........................................................................................................................................................CACACGTCGCACAGTTTCTGCGCTCGA...........................	27	3	4.00	12	0	9	0	3	0
................................................................................................................................................................TCGCACAGTTTCTGCGCTCGACGCCT......................	26	3	3.33	10	0	7	0	3	0
........................................................................................................................................................AGCACACGTCGCACAGTTTCTGCGCT..............................	26	3	3.33	10	0	4	0	6	0
....................................................................................................................TAAAATCATG-------------------GTCGCGCAGCACACG................................................	25	3	3.00	9	0	6	0	2	1
....................................................................................................................TAAAATCATG-------------------GTCGCGCAGCACACGTCG.............................................	28	3	2.33	7	0	2	3	2	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCAC..........................................	26	4	2.00	8	0	3	0	5	0
..........................................................................................................................................................CACACGTCGCACAGTTTCTGCGCT..............................	24	3	1.67	5	0	3	0	2	0
............................................................................................................................................................................TGCGCTCGACGCCTTGCCCAGTTCATCC........	28	3	1.33	4	0	4	0	0	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTT.....................	24	4	1.25	5	0	4	0	1	0
........................................................................................................................................................AGCACACGTCGCACAGTTTCTGCGCTCG............................	28	3	1.00	3	0	1	0	2	0
................................................................................................................................................................TCGCACAGTTTCTGCGCTCGACGCCTT.....................	27	3	1.00	3	0	3	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCA...........................................	25	4	1.00	4	0	0	0	4	0
........................................................................................................................................................................TTTCTGCGCTCGACGCCTTGCCCAG...............	25	4	1.00	4	0	4	0	0	0
..............TG---------------------GACATTTT------------------------------TTT--TTGAAATGAATGGCT.................................................................................................................	28	3	1.00	3	0	3	0	0	0
.................................................................................TGAAATGAATGGCTTCTTTCGAGC.......................................................................................................	24	4	1.00	4	0	3	0	1	0
.....................................................................................................................................................CGCAGCACACGTCGCACAGTTTCTG..................................	25	3	1.00	3	0	3	0	0	0
....................................................................................................CGAGCTACTCGACCGTTAAAATCATG-------------------G..............................................................	27	4	1.00	4	0	4	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGC............................................	24	4	0.75	3	0	0	1	2	0
..................................................................................................................................................TCGCGCAGCACACGTCGCACAGTTTC....................................	26	4	0.75	3	0	2	0	1	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCCAGT..............	25	4	0.75	3	0	3	0	0	0
.......................................................................................................................................................CAGCACACGTCGCACAGTTTCTGC.................................	24	3	0.67	2	2	0	0	0	0
.................................................................................................................................................................................TCGACGCCTTGCCCAGTTCATCC........	23	3	0.67	2	0	2	0	0	0
.......................................................................................................................................................CAGCACACGTCGCACAGTTTCTGCGC...............................	26	3	0.67	2	0	1	0	1	0
............................................T------------------------------TTT--TTGAAATGAATGGCTTCTTT............................................................................................................	24	3	0.67	2	0	2	0	0	0
..........................................TTT------------------------------TTT--TTGAAATGAATGGCTTCTTT............................................................................................................	26	3	0.67	2	0	1	1	0	0
..........................................................................................................................................................CACACGTCGCACAGTTTCTGCGCTCG............................	26	3	0.67	2	0	2	0	0	0
.............TTG---------------------GACATTTT------------------------------TTT--TTGAAATGAATGGC..................................................................................................................	28	3	0.67	2	1	1	0	0	0
..........................................................................................................................................................................TCTGCGCTCGACGCCTTGCCCAGT..............	24	4	0.50	2	0	2	0	0	0
...................................................................................................TCGAGCTACTCGACCGTTAAAATCATG-------------------G..............................................................	28	4	0.50	2	0	2	0	0	0
..........................................................................................................................................................................TCTGCGCTCGACGCCTTGCCCAGTTC............	26	4	0.50	2	0	2	0	0	0
.....................................................................................................GAGCTACTCGACCGTTAAAATCATG-------------------G..............................................................	26	4	0.50	2	0	1	0	1	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCACA.........................................	27	4	0.50	2	0	0	0	2	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTTG....................	25	4	0.50	2	0	2	0	0	0
........................................................................................................................................................................TTTCTGCGCTCGACGCCTTGCCC.................	23	4	0.50	2	1	1	0	0	0
........................................................................................................................................................................TTTCTGCGCTCGACGCCTTGCCCA................	24	4	0.50	2	0	2	0	0	0
..........................................................................................................................................................................TCTGCGCTCGACGCCTTGCCCAGTT.............	25	4	0.50	2	0	2	0	0	0
............................................................................................................................................................................TGCGCTCGACGCCTTGCCCAGTTCA...........	25	4	0.50	2	0	2	0	0	0
.................................................................................................................................................................CGCACAGTTTCTGCGCTCGACGCCTTG....................	27	4	0.50	2	0	1	0	1	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCACAG........................................	28	4	0.50	2	0	0	0	2	0
...............................................................................................TCTTTCGAGCTACTCGACCGT............................................................................................	21	4	0.50	2	0	2	0	0	0
...............................................................................................TCTTTCGAGCTACTCGACCGTT...........................................................................................	22	4	0.50	2	0	2	0	0	0
.................................................................................................................................................................CGCACAGTTTCTGCGCTCGACGCCTT.....................	26	4	0.50	2	0	2	0	0	0
..........................................................................................................................CATG-------------------GTCGCGCAGCACACGTCGCA...........................................	24	4	0.50	2	0	0	0	2	0
..........................................................................................................................CATG-------------------GTCGCGCAGCACACGTCGCACAG........................................	27	4	0.50	2	0	1	0	1	0
...................................................................................................................TTAAAATCATG-------------------GTCGCGCAGCACAC.................................................	25	3	0.33	1	0	1	0	0	0
.......................................................................................................................AATCATG-------------------GTCGCGCAGCACACGTCGCAC..........................................	28	3	0.33	1	0	1	0	0	0
.........................................................................................................TACTCGACCGTTAAAATCATG-------------------GTCG...........................................................	25	3	0.33	1	0	1	0	0	0
.....................................................................................................................AAAATCATG-------------------GTCGCGCAGCACACGTTT.............................................	27	3	0.33	1	0	1	0	0	0
.......................................................................................................................................................CAGCACACGTCGCACAGTTTCTGCGCT..............................	27	3	0.33	1	0	1	0	0	0
............................................................................................................................................................CACGTCGCACAGTTTCTGCGCTCGA...........................	25	3	0.33	1	0	0	0	1	0
......................................................................................................................................................................................GCCTTGCCCAGTTCATCCTCCACCTC	26	3	0.33	1	0	1	0	0	0
........................................................................................................................................................AGCACACGTCGCACAGTTTCTGCGC...............................	25	3	0.33	1	0	1	0	0	0
.................................................................................................................CGTTAAAATCATG-------------------GTCGCGCAGCACAC.................................................	27	3	0.33	1	0	1	0	0	0
.................................................................................................................CGTTAAAATCATG-------------------GTCGCGC........................................................	20	3	0.33	1	0	0	0	1	0
......................................................................................................................................................................................GCCTTGCCCAGTTCATCCTCC.....	21	3	0.33	1	0	1	0	0	0
.............................................................................................................................................................ACGTCGCACAGTTTCTGCGCTCGACGCCT......................	29	3	0.33	1	0	1	0	0	0
.................................................................................................................................................................................TCGACGCCTTGCCCAGTTCATCCTCCA....	27	3	0.33	1	0	1	0	0	0
.....................................................................................................................AAAATCATG-------------------GTCGCGCAGCACACGT...............................................	25	3	0.33	1	0	1	0	0	0
..............................................................................................................................................................CGTCGCACAGTTTCTGCGCTCGACGCCT......................	28	3	0.33	1	0	1	0	0	0
..................................................................................................................................................................................CGACGCCTTGCCCAGTTCATCCTCCACC..	28	3	0.33	1	0	1	0	0	0
.................................................................................................................................................................................TCGACGCCTTGCCCAGTTCATCCTC......	25	3	0.33	1	0	1	0	0	0
.......................................................................................................................AATCATG-------------------GTCGCGCAGCACACGTC..............................................	24	3	0.33	1	0	0	0	0	1
....................................................................................................................TAAAATCATG-------------------GTCGCGCAGCACA..................................................	23	3	0.33	1	0	1	0	0	0
..................................................................................................................GTTAAAATCATG-------------------GTCGCGC........................................................	19	3	0.33	1	0	0	0	1	0
..............TG---------------------GACATTTT------------------------------TTT--TTGAAATGAATGGC..................................................................................................................	27	3	0.33	1	0	1	0	0	0
..GAGAGTCGGCTTTG---------------------GACATTT....................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0
..............TG---------------------GACATTTT------------------------------TTT--TTGAAATGAA......................................................................................................................	23	3	0.33	1	0	1	0	0	0
.................................................................................................................CGTTAAAATCATG-------------------GTCGCGCAGCACA..................................................	26	3	0.33	1	1	0	0	0	0
.................................................................................................................................................................................TCGACGCCTTGCCCAGTTCATCCTCC.....	26	3	0.33	1	0	1	0	0	0
.......................................................................................................................AATCATG-------------------GTCGCGCAGCACACGTCG.............................................	25	3	0.33	1	0	0	0	1	0
.......................................................................................................................................................CAGCACACGTCGCACAGTTTCTGCAAA..............................	27	3	0.33	1	0	1	0	0	0
.......TCGGCTTTG---------------------GACATTTT------------------------------TTT--TTGAA...........................................................................................................................	25	3	0.33	1	0	1	0	0	0
...........................................................................................................................................................ACACGTCGCACAGTTTCTGCGCTCGA...........................	26	3	0.33	1	0	1	0	0	0
......................................................................................................................................................GCAGCACACGTCGCACAGTTTCTGC.................................	25	3	0.33	1	0	1	0	0	0
..................................................................................................................................................TCGCGCAGCACACGTCGCACAGTTTCT...................................	27	3	0.33	1	0	1	0	0	0
....................................................................................................................TAAAATCATG-------------------GTCGCGCAGCACACTA...............................................	26	3	0.33	1	0	1	0	0	0
.............TTG---------------------GACATTTT------------------------------TTT--TTGAAATGAATG....................................................................................................................	26	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................TGCGCTCGACGCCTTGCCCAGTTCATC.........	27	4	0.25	1	0	1	0	0	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTTGCCC.................	28	4	0.25	1	1	0	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCACT.........................................	27	4	0.25	1	0	0	0	1	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCC.................	22	4	0.25	1	0	1	0	0	0
........................................................................................................................................................................TTTCTGCGCTCGACGCCTTGCCCAGT..............	26	4	0.25	1	0	1	0	0	0
.................................................................................................................................................................CGCACAGTTTCTGCGCTCGACGCC.......................	24	4	0.25	1	0	1	0	0	0
............................................................................................................................TG-------------------GTCGCGCAGCACACGTCGCAC..........................................	23	4	0.25	1	0	1	0	0	0
....................................................................................................................................................................ACAGTTTCTGCGCTCGACGCCTT.....................	23	4	0.25	1	0	1	0	0	0
......................................................................................................................................................................AGTTTCTGCGCTCGACGCCTTGCCC.................	25	4	0.25	1	0	1	0	0	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCCAGTT.............	26	4	0.25	1	0	1	0	0	0
..........................................................................................................................................................................TCTGCGCTCGACGCCTTGCCCAG...............	23	4	0.25	1	0	1	0	0	0
...............................................................................................TCTTTCGAGCTACTCGACCGTTAA.........................................................................................	24	4	0.25	1	0	1	0	0	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCCAG...............	24	4	0.25	1	0	1	0	0	0
............................................................................................................................................................................TGCGCTCGACGCCTTGCCCAGTTCAT..........	26	4	0.25	1	0	1	0	0	0
....................................................................................................................................................................ACAGTTTCTGCGCTCGACGCCTTG....................	24	4	0.25	1	0	0	0	1	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCCAGTTG............	27	4	0.25	1	0	1	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTC..............................................	22	4	0.25	1	0	0	0	1	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTTT....................	25	4	0.25	1	0	0	0	1	0
..................................................................................................................................................TCGCGCAGCACACGTCGCA...........................................	19	4	0.25	1	0	1	0	0	0
........................................................................................................................ATCATG-------------------GTCGCGCAGCACACGTCGCACA.........................................	28	4	0.25	1	0	1	0	0	0
..........................................................................................................................CATG-------------------GTCGCGCAGCACACGTCGCAC..........................................	25	4	0.25	1	0	0	0	1	0
..........................................................................................TGGCTTCTTTCGAGCTACTCGACCGT............................................................................................	26	4	0.25	1	0	1	0	0	0
..............................................................................................TTCTTTCGAGCTACTCGACCGTTAAA........................................................................................	26	4	0.25	1	0	1	0	0	0
....................................................................................................CGAGCTACTCGACCGTTAAAATCA....................................................................................	24	4	0.25	1	0	1	0	0	0
..................................................................................................................................................TCGCGCAGCACACGTCGCACAGTTT.....................................	25	4	0.25	1	0	0	0	1	0
.............................................................................T--TTGAAATGAATGGCTTCTTT............................................................................................................	21	4	0.25	1	0	0	0	1	0
.................................................................................TGAAATGAATGGCTTCTTTCGAG........................................................................................................	23	4	0.25	1	0	1	0	0	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTTGCC..................	27	4	0.25	1	0	1	0	0	0
....................................................................................................................................................GCGCAGCACACGTCGCACAGTTTC....................................	24	4	0.25	1	0	1	0	0	0
..................................................................................................TTCGAGCTACTCGACCGTTAAAATC.....................................................................................	25	4	0.25	1	0	1	0	0	0
...........................................................................................................................................................................CTGCGCTCGACGCCTTGCCCAGTT.............	24	4	0.25	1	0	1	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCACG.........................................	27	4	0.25	1	0	0	0	1	0
..................................................................................................TTCGAGCTACTCGACCGTTAAAATCATG-------------------...............................................................	28	4	0.25	1	0	1	0	0	0
.........................................................................................................................TCATG-------------------GTCGCGCAGCACACGTCGCAA..........................................	26	4	0.25	1	0	0	0	1	0
...................................................................................................................................................................CACAGTTTCTGCGCTCGACGCCTTGC...................	26	4	0.25	1	0	1	0	0	0
..................................................................................................TTCGAGCTACTCGACCGTTAAAATCA....................................................................................	26	4	0.25	1	0	1	0	0	0
..........................................................................................................................CATG-------------------GTCGCGCAGCACACGTCGCACA.........................................	26	4	0.25	1	0	1	0	0	0
...............................................................................................TCTTTCGAGCTACTCGACCG.............................................................................................	20	4	0.25	1	0	1	0	0	0
.........................................................................................................................................................................TTCTGCGCTCGACGCCTTGCCCAGTAA............	27	4	0.25	1	0	1	0	0	0
...............................................................................................TCTTTCGAGCTACTCGACCGTTAAA........................................................................................	25	4	0.25	1	0	1	0	0	0

dp5

GAA---TTCATTGGCGAAATCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTTTCCTGCGAGCAACTCGGCCATGAAACCCCGC-------------------CTTTCTCCAAGTGCGTCGGACAGTTT-------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	27	2	63.00	126	0	120	4	0	1	0	1	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGC.......................................................................................................	24	1	53.00	53	0	19	0	0	0	0	0	30	4	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAACC......................................................................................	27	1	47.00	47	0	39	2	0	1	0	0	5	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	28	2	45.00	90	0	79	9	0	2	0	0	0	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAAC.......................................................................................	26	1	42.00	42	0	38	1	0	2	0	0	1	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGC.....................................................................................................................	25	2	30.50	61	0	55	3	1	0	0	0	2	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAACCC.....................................................................................	28	1	25.00	25	0	20	4	0	1	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	29	2	20.50	41	0	41	0	0	0	0	0	0	0	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	27	2	19.00	38	0	16	0	0	0	0	0	20	2	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAA........................................................................................	25	1	18.00	18	0	18	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCAAC....................................................................................................	27	1	17.00	17	0	4	0	0	0	0	0	12	1	0
.................................................................................TGATACATGCGGTTTCCTGCGAG........................................................................................................	23	1	14.00	14	0	7	0	0	0	0	0	2	5	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	24	2	13.00	26	0	25	0	0	0	0	1	0	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGA..........................................................................................	23	1	13.00	13	0	13	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACCC.....................................................................................	25	1	13.00	13	0	12	1	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATG......................................................................................................................	24	2	12.50	25	0	25	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCAA.....................................................................................................	26	1	12.00	12	0	1	0	0	0	0	0	5	6	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCA......................................................................................................	25	1	11.00	11	0	5	0	0	0	0	0	4	2	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	25	2	10.00	20	0	10	0	0	0	0	0	10	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCG....................................................................................................................	26	2	8.50	17	0	17	0	0	0	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	22	2	8.50	17	0	13	0	0	0	0	1	0	3	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	23	2	8.50	17	0	12	0	0	4	0	1	0	0	0
.......................................................................................................GCAACTCGGCCATGAAACCCCGC-------------------...............................................................	23	1	8.00	8	0	7	1	0	0	0	0	0	0	0
..........................................TGA------------------------------CCT--CTGATACATGCGGTTTCCTG............................................................................................................	26	1	8.00	8	0	8	0	0	0	0	0	0	0	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	26	2	8.00	16	0	13	0	0	1	0	0	2	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCATG...........................................................................................	22	1	8.00	8	0	8	0	0	0	0	0	0	0	0
..................................................................................GATACATGCGGTTTCCTGCGAGC.......................................................................................................	23	1	7.00	7	0	0	0	0	0	0	0	7	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAGTT......................................	23	2	7.00	14	0	10	0	0	0	0	1	2	1	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAAA.......................................................................................	26	1	7.00	7	0	6	1	0	0	0	0	0	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	26	2	6.50	13	0	13	0	0	0	0	0	0	0	0
........................................................................................TGCGGTTTCCTGCGAGCAACTCGG................................................................................................	24	1	6.00	6	0	4	0	0	0	0	0	2	0	0
........................................................................................TGCGGTTTCCTGCGAGCAACTCGGCCA.............................................................................................	27	1	6.00	6	0	2	0	0	0	0	0	2	2	0
.................................................................................TGATACATGCGGTTTCCTGCGA.........................................................................................................	22	1	5.00	5	0	3	0	0	0	0	0	1	1	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAA.........................................................................................	24	1	5.00	5	0	4	1	0	0	0	0	0	0	0
........................................................................................TGCGGTTTCCTGCGAGCAACTCGGC...............................................................................................	25	1	5.00	5	0	2	0	0	0	0	0	2	1	0
........................................ATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	23	2	4.50	9	0	8	0	0	0	0	0	0	1	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACAT.......................................................................................................................	23	2	4.50	9	0	9	0	0	0	0	0	0	0	0
.........................................TTGA------------------------------CCT--CTGATACATGCGGTTTCCTG............................................................................................................	27	1	4.00	4	0	4	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAACCC.....................................................................................	27	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.........................................TTGA------------------------------CCT--CTGATACATGCGGTTTCC..............................................................................................................	25	1	4.00	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAGT.......................................	22	2	3.50	7	0	7	0	0	0	0	0	0	0	0
.......................TA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGA............................................................................................................................	25	2	3.50	7	0	1	1	0	0	0	0	5	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATGC.....................................................................................................................	24	2	3.50	7	0	7	0	0	0	0	0	0	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAGTGC.................................................	25	1	3.00	3	0	2	0	0	0	0	0	1	0	0
.................................................................................................................CATGAAACCCCGC-------------------CTTTCTCCAAG....................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................T--CTGATACATGCGGTTTCCTGCGAGC.......................................................................................................	26	1	3.00	3	1	1	0	0	0	0	0	1	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAA........................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAAC.......................................................................................	25	1	3.00	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGTT......................................	22	2	3.00	6	0	5	0	0	0	0	0	1	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAAC.......................................................................................	23	1	3.00	3	0	2	1	0	0	0	0	0	0	0
..........................................TGA------------------------------CCT--CTGATACATGCGGTTTCC..............................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACC......................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................T--CTGATACATGCGGTTTCCTGCGAG........................................................................................................	25	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCG..........................................................................................................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......................TA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATA..........................................................................................................................	27	2	3.00	6	0	2	0	0	0	0	0	2	2	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	28	2	3.00	6	0	6	0	0	0	0	0	0	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCAT............................................................................................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGCG....................................................................................................................	24	2	3.00	6	0	2	0	0	0	0	0	3	1	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	27	2	2.50	5	0	5	0	0	0	0	0	0	0	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGC.....................................................................................................................	23	2	2.50	5	0	1	0	0	0	0	0	3	1	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACATGC.....................................................................................................................	26	2	2.50	5	0	4	1	0	0	0	0	0	0	0
................................................................................................................CCATGAAACCCCGC-------------------CTTTCTCCAAG....................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACCCCGC-------------------...............................................................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................GCAACTCGGCCATGAAACCCCGC-------------------CT.............................................................	25	1	2.00	2	0	1	1	0	0	0	0	0	0	0
...................................................................................................GCGAGCAACTCGGCCATGAAAC.......................................................................................	22	1	2.00	2	0	1	1	0	0	0	0	0	0	0
......................................CTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	24	2	2.00	4	0	2	1	0	1	0	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAG........................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAA........................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................GCAACTCGGCCATGAAACCCCGC-------------------CTT............................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACA........................................................................................................................	22	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................TTTCTCCAAGTGCGTCGGACAGTT......................................	24	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................TTTCCTGCGAGCAACTCGGCCATGAAAC.......................................................................................	28	1	2.00	2	0	1	0	0	0	0	0	1	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAGTGCG................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................CTGATACATGCGGTTTCCTGCGA.........................................................................................................	23	1	2.00	2	0	1	0	0	0	0	0	1	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAGTGCGTC..............................................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATATGA.......................................................................................................................	23	3	1.67	5	0	5	0	0	0	0	0	0	0	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	29	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................CGC-------------------CTTTCTCCAAGTGCGTCGGACAG........................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAAA.......................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGAAG........................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................TTTCCTGCGAGCAACTCGGCC..............................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................CTGATACATGCGGTTTCCTG............................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................T--CTGATACATGCGGTTTCCTGCGA.........................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAGTGCA................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................GA------------------------------CCT--CTGATACATGCGGTTTCC..............................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................CATGAAACCCCGC-------------------CTTTCTCCAAGTGCG................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACA........................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACCCCGC-------------------C..............................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCGGC..................................................................................................................	28	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.............................................................................................TTTCCTGCGAGCAACTCGGCCATGA..........................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................CTGCGAGCAACTCGGCCATGAAACCC.....................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................TTGA------------------------------CCT--CTGATACATGCGGTTTCCT.............................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................GCGAGCAACTCGGCCATGAAACCC.....................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCAACT...................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................TCCTGCGAGCAACTCGGCCATGT..........................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................TCCTGCGAGCAACTCGGCC..............................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................GATACATGCGGTTTCCTGCGAGCAAC....................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................TCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--C...............................................................................................................................	26	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.............................................................................T--CTGATACATGCGGTTTCCTGC...........................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................CGC-------------------CTTTCTCCAAGTGCGTCGA............................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........................................................................................TGCGGTTTCCTGCGAGCAACTCGGCC..............................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................ATACATGCGGTTTCCTGCGA.........................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATGCG....................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAACC......................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TACATGCGGTTTCCTGCGAGCAACT...................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................GA------------------------------CCT--CTGATACATGCGGTTTCCTGC...........................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................TTCCTGCGAGCAACTCGGC...............................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................TTCCTGCGAGCAACTCGGCCATGAAAC.......................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................GAGCAACTCGGCCATGAAACCCCGC-------------------CTT............................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................CT--CTGATACATGCGGTTTCCTGCGA.........................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CCTATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCAC.....................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................T--CTGATACATGCGGTTTCC..............................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TACATGCGGTTTCCTGCGAGCAACTC..................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAA.........................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TACATGCGGTTTCCTGCGAGCAACTCGGC...............................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................GCAACTCGGCCATGAAACCCCGC-------------------C..............................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAGTGCGT...............................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................CTGCGAGCAACTCGGCCATGAAACC......................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAACCCC....................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACATGCG....................................................................................................................	27	2	1.00	2	0	1	0	0	0	0	1	0	0	0
......................................................................................CATGCGGTTTCCTGCGAGCAACTCGG................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................TGATACATGCGGTTTCCTGCGAGCAAA....................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................GAAACCCCGC-------------------CTTTCTCCAAGTGC.................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................TGAAACCCCGC-------------------CTTTCTCCAAG....................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................ACATGCGGTTTCCTGCGAGCAACTCGGC...............................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................CTGATACATGCGGTTTCCTGCGAGCAAC....................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................A------------------------------CCT--CTGATACATGCGGTTTCCTGCG..........................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................ATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................CT--CTGATACATGCGGTTTCCTGCGAGC.......................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTC.................................................................................................................	29	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.............................................................................................TTTCCTGCGAGCAACTCGG................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACCCC....................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................AACTCGGCCATGAAACCCCGC-------------------CTT............................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................CATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGAT...........................................................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	2	0	0
...........................................................................................................CTCGGCCATGAAACCCCGC-------------------CT.............................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................GCGAGCAACTCGGCCATGAAACCCC....................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACCCCG...................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TGCGAGCAACTCGGCCATGAAACA......................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................CATGCGGTTTCCTGCGAGC.......................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................CT--CTGATACATGCGGTTTCCT.............................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................CATGAAACCCCGC-------------------CTTTCTCCAA.....................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAAAAA......................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................TTT-TTCCTATTGA------------------------------CCT--CTGATACATG......................................................................................................................	26	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................CCTGCGAGCAACTCGGCCATGAA.........................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGT.......................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................TT-TTCCTATTGA------------------------------CCT--CTGATACATG......................................................................................................................	25	2	1.00	2	0	1	1	0	0	0	0	0	0	0
....................................................................................................CGAGCAACTCGGCCATGAAAC.......................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................C-------------------CTTTCTCCAAGTGCGTCGGAC..........................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................CATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATA..........................................................................................................................	29	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......TCATTGGCGAAATCCATA---CGCTT...............................................................................................................................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGGTTA................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCAA...................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................TCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--CT..............................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................CTTT-TTCCTATTGA------------------------------CCT--CTGATAC.........................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	1	0	0
...............................TTT-TTCCTATTGA------------------------------CCT--CTGATAC.........................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................C-------------------CTTTCTCCAAGTGCGTCGGACAGT.......................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAGTTT-------------------------------------	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATACATG......................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................GA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGC.....................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................TTGA------------------------------CCT--CTGATACATGCGGTTTC...............................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................ATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAG........................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGTTT-------------------------------------	23	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGGTTT................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGTTA-------------------------------------	23	2	0.50	1	0	0	0	0	0	0	0	0	1	0
....................................TCCTATTGA------------------------------CCT--CTGATACATGCGGTTA................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................TTT-TTCCTATTGA------------------------------CCT--CTGA............................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGCG....................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATATG........................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................TT-TTCCTATTGA------------------------------CCT--CTGA............................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................CCTATTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................CTATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................GA------------------------------CCT--CTGATACATGCGGTTT................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGT.....................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................TGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................C-------------------CTTTCTCCAAGTGCGTCGGACAGTT......................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................TTGA------------------------------CCT--CTGATACATGCGGT..................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................CTTTCTCCAAGTGCGTCGGACAG........................................	23	2	0.50	1	0	0	0	0	0	0	0	0	1	0
.....................................CCTATTGA------------------------------CCT--CTGATACATGCGGTT.................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................T-TTCCTATTGA------------------------------CCT--CTGATACATGCA....................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................TCCATA---CGCTTT-TTCCTATTGA------------------------------CC...................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	2	0	0
...................................TTCCTATTGA------------------------------CCT--CTGATATGA.......................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TCCAAGTGCGTCGGACAGA.......................................	19	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...........TGGCGAAATCCATA---CGCTTT-TTCC.........................................................................................................................................................................	24	4	0.25	1	0	0	0	0	0	0	0	0	1	0
.......TCATTGGCGAAATCCATA---CGCTTT-TTC..........................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.......TCATTGGCGAAATCCATA---CGCTTT-T............................................................................................................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................TCCAAGTGCGTCGGACAGTTT-------------------------------------	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TCCAAGTGCGTCGGACAGTTA-------------------------------------	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................A---CGCTTT-TTCCTATTGA------------------------------C....................................................................................................................................	18	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

AATGTATTCATTGGCGAAATCCATA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATACATGCGGTTTCCTGCGAGCAACTCGGCCATGAAACCCTGC-------------------CTTTCTCCAAGTGCGTCGGACAGTTTCTTCA--------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.......................TA---CGCTTT-TTCCTATTGA------------------------------CCT--CTGATA..........................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
.......................................TATTGA------------------------------CCT--CTGATACATGCGG...................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAGT.......................................	22	2	1.00	2	1	1	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACAGTT......................................	23	2	0.50	1	0	0	1	0	0	0
.............................................................................................................................C-------------------CTTTCTCCAAGTGCGTCGGACAGTT......................................	26	2	0.50	1	0	1	0	0	0	0
...................................................................................................................................................TTCTCCAAGTGCGTCGGACA.........................................	20	2	0.50	1	0	1	0	0	0	0
........CATTGGCGAAATCCATA---CGCTTT-T............................................................................................................................................................................	24	6	0.50	3	0	3	0	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGTT......................................	22	2	0.50	1	0	0	1	0	0	0
....................................................................................................................................................TCTCCAAGTGCGTCGGACAGT.......................................	21	2	0.50	1	1	0	0	0	0	0
........CATTGGCGAAATCCATA---CGCTTT-TT...........................................................................................................................................................................	25	6	0.33	2	0	2	0	0	0	0
.........ATTGGCGAAATCCATA---CGCTTT-TT...........................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0
.........ATTGGCGAAATCCATA---CGCTT...............................................................................................................................................................................	21	7	0.14	1	0	1	0	0	0	0

droAna3

AAT--GCTCATTCGAAAATTTTAAC---CGAGCC-GCTATATTCT------------------------------TCT--TACTAATGAAGGGCTTCTTCCGTGCTACACGACCATAAAAGTTGTG-------------------ATCGTGTAGCACGCGGCGCACCGTATCAGCACTGCACTTTTCCCCCATTTC------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................................................................CACCGTATCAGCACTGCACTTTTCCCC..................	27	1	7.00	7	1	6	0	0	0	0
...............................................................................................TCTTCCGTGCTACACGACCATAAAAGT......................................................................................	27	1	4.00	4	2	2	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCACC.........................................	24	9	3.44	31	8	23	0	0	0	0
.................................................................................................TTCCGTGCTACACGACCATAAAAGTTG....................................................................................	27	1	3.00	3	0	3	0	0	0	0
..............................................................................................TTCTTCCGTGCTACACGACCATAAAAGT......................................................................................	28	1	3.00	3	1	2	0	0	0	0
........................................................................................................................................................................TATCAGCACTGCACTTTTCCCCCATT..............	26	1	2.00	2	0	2	0	0	0	0
...................................................................................................................................................................CACCGTATCAGCACTGCACTTTTCCC...................	26	1	2.00	2	0	2	0	0	0	0
.........................................................................................................................................................................ATCAGCACTGCACTTTTCCCCCATT..............	25	1	2.00	2	2	0	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCACCG........................................	25	9	1.56	14	13	1	0	0	0	0
..................................................................................................................................................................GCACCGTATCAGCACTGCACTTTTCCCCC.................	29	1	1.00	1	1	0	0	0	0	0
...................................................................................................CCGTGCTACACGACCATAAAAGTTG....................................................................................	25	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................TATCAGCACTGCACTTTTCCCC..................	22	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................TCAGCACTGCACTTTTCCCCCATTTC------------	26	1	1.00	1	0	1	0	0	0	0
..............................................................................................TTCTTCCGTGCTACACGACCATAAAA........................................................................................	26	1	1.00	1	1	0	0	0	0	0
..T--GCTCATTCGAAAATTTTAAC---CGAGCC-.............................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................TATCAGCACTGCACTTTTCCCCCATTT.............	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................TATCAGCACTGCACTTTTCCCCCATC..............	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................TATCAGCACTGCACTTTTCCCCC.................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................ACCGTATCAGCACTGCACTTTTCCCC..................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................TCTTCCGTGCTACACGACCATAAAAGTTG....................................................................................	29	1	1.00	1	1	0	0	0	0	0
.................................................................................................................CATAAAAGTTGTG-------------------ATCGTGTAGCACGCG................................................	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................CACCGTATCAGCACTGCACTTTTCC....................	25	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................TAGCACGCGGCGCACCGTATCAGCAC...............................	26	8	0.75	6	2	4	0	0	0	0
..........................................................................................................................TGTG-------------------ATCGTGTAGCACGCGGCGCACCG........................................	27	9	0.56	5	5	0	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCACCGTA......................................	27	8	0.50	4	2	2	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCACCGT.......................................	26	9	0.44	4	3	1	0	0	0	0
..........................................................................................................................TGTG-------------------ATCGTGTAGCACGCGGCGCACC.........................................	26	9	0.44	4	3	1	0	0	0	0
............................................................................................................................................................CGCGGCGCACCGTATCAGCACTGCACT.........................	27	3	0.33	1	1	0	0	0	0	0
......................................ATATTCT------------------------------TCT--TACTAATGAAGGG...................................................................................................................	23	3	0.33	1	1	0	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCAC..........................................	23	9	0.33	3	1	2	0	0	0	0
...........................................................................TCT--TACTAATGAAGGGCTTCTTCCGT.........................................................................................................	26	3	0.33	1	0	1	0	0	0	0
.........................................................................................................................TTGTG-------------------ATCGTGTAGCACGCGGCGCA...........................................	25	9	0.33	3	3	0	0	0	0	0
.....................................TATATTCT------------------------------TCT--TACTAATGAAGGGC..................................................................................................................	25	3	0.33	1	0	0	0	0	1	0
.........................................................................................................................TTGTG-------------------ATCGTGTAGCACGCGGCGCACC.........................................	27	9	0.33	3	3	0	0	0	0	0
.....................................................................................................................................................TGTAGCACGCGGCGCACCGTATCAGC.................................	26	7	0.29	2	1	1	0	0	0	0
.....................................TATATTCT------------------------------TCT--TACTAATGAAGGGCC.................................................................................................................	26	4	0.25	1	0	1	0	0	0	0
.......................................................................................................................................................TAGCACGCGGCGCACCGTATCAGCACTG.............................	28	8	0.25	2	1	1	0	0	0	0
......................................................................................TGAAGGGCTTCTTCCGTGCTACACGA................................................................................................	26	4	0.25	1	1	0	0	0	0	0
..................................................................................................................................................TCGTGTAGCACGCGGCGCACCGTATC....................................	26	8	0.25	2	1	1	0	0	0	0
..........................................................................................................................TGTG-------------------ATCGTGTAGCACGCGGCGCAC..........................................	25	9	0.22	2	2	0	0	0	0	0
......................................................................................................................AAGTTGTG-------------------ATCGTGTAGCACGCGGC..............................................	25	9	0.22	2	1	1	0	0	0	0
.........................................................................................................................TTGTG-------------------ATCGTGTAGCACGCGGCGCACCG........................................	28	9	0.22	2	2	0	0	0	0	0
..................................................................................................................................................TCGTGTAGCACGCGGCGCACCG........................................	22	9	0.22	2	1	1	0	0	0	0
.......................................................................................................................................................TAGCACGCGGCGCACCGTATCAGCACTGC............................	29	5	0.20	1	0	1	0	0	0	0
.....................................................................................................................................................TGTAGCACGCGGCGCACCGTATCAG..................................	25	7	0.14	1	1	0	0	0	0	0
..................................................................................................................................................TCGTGTAGCACGCGGCGCACCGTATCAG..................................	28	7	0.14	1	1	0	0	0	0	0
..................................................................................................................................................TCGTGTAGCACGCGGCGCACCGTATT....................................	26	8	0.13	1	1	0	0	0	0	0
...................................................................................................................................................CGTGTAGCACGCGGCGCACCGTATC....................................	25	8	0.13	1	1	0	0	0	0	0
....................................................................................................................................................GTGTAGCACGCGGCGCACCGTATC....................................	24	8	0.13	1	1	0	0	0	0	0
..................................................................................................................................................TCGTGTAGCACGCGGCGCACCGTAC.....................................	25	8	0.13	1	0	1	0	0	0	0
.......................................................................................................................................................TAGCACGCGGCGCACCGTATCAGCACT..............................	27	8	0.13	1	1	0	0	0	0	0
.........................................................................................................................TTGTG-------------------ATCGTGTAGCACGCG................................................	20	9	0.11	1	1	0	0	0	0	0
..........................................................................................................................TGTG-------------------ATCGTGTAGCACGCGGCGCA...........................................	24	9	0.11	1	1	0	0	0	0	0
.........................................................................................................................TTGTG-------------------ATCGTGTAGCACGCGGCGC............................................	24	9	0.11	1	1	0	0	0	0	0
........................................................................................................................GTTGTG-------------------ATCGTGTAGCACGCGGCGC............................................	25	9	0.11	1	1	0	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGCA...........................................	22	9	0.11	1	1	0	0	0	0	0
.............................................................................................................................G-------------------ATCGTGTAGCACGCGGCGCACC.........................................	23	9	0.11	1	0	1	0	0	0	0
............................................................................................................................TG-------------------ATCGTGTAGCACGCGGCGC............................................	21	9	0.11	1	0	0	0	1	0	0
.....................................................................................................................AAAGTTGTG-------------------ATCGTGTAGCACGCGG...............................................	25	9	0.11	1	0	1	0	0	0	0
...........................................................................................................................GTG-------------------ATCGTGTAGCACGCGGC..............................................	20	9	0.11	1	1	0	0	0	0	0
........................C---CGAGCC-GCTATATTCT------------------------------TCT--T...............................................................................................................................	21	10	0.10	1	0	1	0	0	0	0
..........................................................................................................................................................CACGCGGCGCACCGTATCAGCAC...............................	23	11	0.09	1	0	1	0	0	0	0
..............................................................................................................................................................CGGCGCACCGTATCAGCACTG.............................	21	13	0.08	1	1	0	0	0	0	0
...............................................................................................TCTTCCGTGCTACACGACCA.............................................................................................	20	15	0.07	1	1	0	0	0	0	0

droBip1

TAT--GGTCCATGGCGAATTTTAAT---CTTGCC-TTCTGGTTTT------------------------------TTG--CACTAATGAAAGGCTTCTTTCGTGCAATTCGACCATTAAACCCCTG-------------------GCTGTGCAGAACTCGTCGGATGGTGTCTGGGTGGCAAGACTTGCCCAGCTCTGTCTCCACTTG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAT--GCTCCTTGACAAATTTAAGC---CTGCAC-TTTTGATTTT------------------------------TAT--CGTTGATGAAGGGCTTTTTCCGAGCTACTCGGCCATTAAAGTTATG-------------------TTCCCGCAATACCCGGCGGACGGTCTCCACGGAACATTTTTTGCCCAATTCCTTTTCCACATC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AATGTGCTCCTTTGTGAACTTTAGA---CGAGCA-GCAATATTCT------------------------------TCG--TACTGATGAATGGCTTCTTCCGTGCTACTCGACCATTAAAGTTGTT-------------------ATTTTGCAGCACACGACGCACCGTAGCAGGACTACACTGTTTTCCCATTTCGTCCTCGACCTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGT--A-----------ATTTTAGG---CGAGCAGAAATTATTTT------------------------------TGT--TGCTGATAAATGGCTTTTTCCGTGCAACTCGGTCGTTAAAGTTGTG-------------------ATCATGCAA--CACGGCGCACTGCATCAGCACTACACTTTTGGCCCCCATCTTCCTCGACCTG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGT--GTTCCTTTGCGAACTTTAAG---CGGCTG-GCTCTATTT-------------------------------TTT--TATTTATTAACGGCTTCTTGCGAGCAACTCGGCCATTAAAATCATG-------------------TTCCCTTAAAACACGTCGGACTGTTTCCGTGCTAAATTTTTGGCCGGTTATGTCCTGCA-TTT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TATGTGTTGCTTTGTAAACTTTAGC---CGAGCA-GCAATATTTT------------------------------TCT--TGCTGATAAAGGGCTTCTTCCGTGCTACTCGACCATTGAAGTTATG-------------------ATCGTGCAGCACACGACGCACCGTATCAGGACTACACTTCTTGCCCATTTCGTCCTCGACCTC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGG--T-GGCTTG-GAAATGTGGTCCTTTGATGT-GGTCGATTTG------------------------------TTT--TTGAAATATAGGGCTTCTTTC-----------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AA---GTTCCCTGGCGAATTTGACG---CGCGCC-AACTTATTTT------------------------------TAG--CACTTATAAAGGGCTTTTTTCTAGGAACTCGACCATTAAAGTTATG-------------------GTTCTGTAAAATGTTCCGAACTGTACCTGGGCAACATTTTTTGCCCATTTCGTTCTCGATCTC	Size	Hit Count	Total Norm	Total
No Reads

droYak3

AAT--GCTTTTTAGCAAACTTTTAA---CGTGCC-TTAATGTTTT------------------------------GAG--CACTTATAAATGCTTTCTTACGTGCAGTTTTATCATTTAAATCATG-------------------CTCACGGAGCACACGCCGAATTGTTTCC-----------------------------------

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

TGT--GCTCCTTTGAGAATTTTATC---TTAGCA-GCTCTATTTT------------------------------TTT--GGCTTATGAAAGGCTTCTTTCGTAATACTCGACCATAAAAATAATGGTATAAAAATACCATAATGATCATGTAATACAAGGCACACTGTATCATGACTAT-CTTCTTGCCCATTTCGTCCTTGATCTG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
......................................................................................................................................................................TGTATCATGACTAT-CTTCTTGCCCAT...............	26	1	1.00	1	1	0	0	0	0	0	0

dgr_72

scaffold_14355:63-114 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads