ID:

dgr_7

Coordinate:

scaffold_14830:1051334-1051409 +

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

intron

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.0 -44.0 -43.9

Flybase annnotation

intron [Dgri\GH17244-in]; utr5 [utr5_plus_11464]

No Repeatable elements found

Sense Strand Reads

CAATCGTTATCCCAGATGTCCTTGACGAATGTCAAATGCTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGATTTGCCATACACATAAATATACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCAACTCCATCGCCAGTTAGATAGATAAATCAATCAAGATA

***********************************.((((((((..(((((((.(((((.((((.(((((((((......((.((.....)).))......))))))))))))).))))))))))))..)))).))))..************************************
Read size # Mismatch Hit Count Total Norm Total M041

female body

V109

male body
........................................................................................................TAGCACCACATGATTCGGCTT................................................... 21 0 1 2162.00 2162 1466 696
........................................................................................................TAGCACCACATGATTCGGCTTC.................................................. 22 0 1 229.00 229 127 102
........................................................................................................TAGCACCACATGATTCGGCTTT.................................................. 22 1 1 211.00 211 173 38
........................................................................................................TAGCACCACATGATTCGGCT.................................................... 20 0 1 141.00 141 102 39
.........................................................................................................AGCACCACATGATTCGGCTT................................................... 20 0 1 90.00 90 90 0
........................................................................................................TAGCACCACATGATTCGGC..................................................... 19 0 1 21.00 21 19 2
........................................................................................................TAGCACCACATGATTCGGCTG................................................... 21 1 1 16.00 16 15 1
........................................................................................................TAGCACCACATGATTCGGCTTCT................................................. 23 1 1 16.00 16 9 7
..................................................GCCCGGATTCTGTGTGTGCTGCG....................................................................................................... 23 0 1 15.00 15 11 4
........................................................................................................TAGCACCACATGATTCGGCTTCA................................................. 23 1 1 13.00 13 5 8
.........................................................................................................AGCACCACATGATTCGGCTTT.................................................. 21 1 1 13.00 13 13 0
........................................................................................................TAGCACCACATGATTCGG...................................................... 18 0 1 11.00 11 11 0
........................................................................................................TAGCACCACATGATTCGGCTTTT................................................. 23 2 1 11.00 11 11 0
........................................................................................................TAGCACCACATGATTCGCCTT................................................... 21 1 1 9.00 9 0 9
........................................................................................................TAGCACCACATGATTCGGCTTA.................................................. 22 1 1 6.00 6 3 3
.........................................................................................................AGCACCACATGATTCGGCT.................................................... 19 0 1 5.00 5 5 0
.......................................................................................................CTAGCACCACATGATTCGGCTT................................................... 22 1 1 5.00 5 5 0
........................................................................................................TAGCACTACATGATTCGGCTT................................................... 21 1 1 5.00 5 2 3
........................................................................................................TACCACCACATGATTCGGCTT................................................... 21 1 1 5.00 5 0 5
.........................................................................................................AGCACCACATGATTCGGCTTC.................................................. 21 0 1 5.00 5 5 0
........................................................................................................TAGCACCACATGATTCGGCTTCC................................................. 23 1 1 4.00 4 2 2
..........................................................................................................GCACCACATGATTCGGCTT................................................... 19 0 1 4.00 4 3 1
..................................................GCCCGGATTCTGTGTGTGCTG......................................................................................................... 21 0 1 4.00 4 3 1
........................................................................................................TAGCACAACATGATTCGGCTT................................................... 21 1 1 3.00 3 0 3
........................................................................................................TAGCACCACATGATTCGACTTC.................................................. 22 1 1 3.00 3 0 3
........................................................................................................TAGCACCACATGATTCGGCTTTG................................................. 23 1 1 3.00 3 3 0
.................................................AGCCCGGATTCTGTGTGTGCT.......................................................................................................... 21 0 1 3.00 3 2 1
........................................................................................................TAGCACCACATGATTCGACTT................................................... 21 1 1 3.00 3 0 3
.......................................................................................................TTAGCACCACATGATTCGGCTT................................................... 22 1 1 3.00 3 3 0
........................................................................................................TAGCAACACATGATTCGGCTT................................................... 21 1 1 3.00 3 0 3
........................................................................................................TAGCACCATATGATTCGGCTT................................................... 21 1 1 3.00 3 1 2
.........................................................................TTTGCTGATTTGCCATACACAT................................................................................. 22 0 1 3.00 3 3 0
........................................................................................................TAGCACCACATGATTCGGCTA................................................... 21 1 1 3.00 3 3 0
........................................................................................................TAGCACCACATGATTCGGCTTGGCA............................................... 25 3 1 3.00 3 3 0
........................................................................................................TAGCGCCACATGATTCGGCTT................................................... 21 1 1 2.00 2 1 1
........................................................................................................TAGCATCACATGATTCGGCTT................................................... 21 1 1 2.00 2 0 2
........................................................................................................TAGCACCACACGATTCGGCTT................................................... 21 1 1 2.00 2 0 2
........................................................................................................TAGCACCAGATGATTCGGCTTC.................................................. 22 1 1 2.00 2 0 2
..................................................GCCCGGATTCTGTGTGTGCTGCGT...................................................................................................... 24 0 1 2.00 2 2 0
........................................................................................................TAGCACCACATGATTCAGCTT................................................... 21 1 1 2.00 2 0 2
..................................................GCCCGGATTCTGTGTGTGCTGC........................................................................................................ 22 0 1 2.00 2 1 1
.................................................AGCCCGGATTCTGTGTGTGCTGCG....................................................................................................... 24 0 1 2.00 2 1 1
........................................................................................................TAGCACCACATGATTCGGCTTG.................................................. 22 1 1 2.00 2 2 0
........................................................................................................CAGCACCACATGATTCGGCTT................................................... 21 1 1 2.00 2 1 1
........................................................................................................TAGCACCACATGATTCGTCTTC.................................................. 22 1 1 2.00 2 0 2
........................................................................................................TAGCACCACATGATTCGGCTTGG................................................. 23 1 1 2.00 2 2 0
.......................................................................................................GTAGCACCACATGATTCGGCT.................................................... 21 0 1 1.00 1 1 0
....................................................CCGGATTCTGTGTGTGCTGCG....................................................................................................... 21 0 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGACT.................................................... 20 1 1 1.00 1 0 1
........................................................................................................TAGCTCCACATGATTCGGCTT................................................... 21 1 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGGCTTTGG................................................ 24 2 1 1.00 1 1 0
..........................................................................TTGCTGATTTGCCATACACAT................................................................................. 21 0 1 1.00 1 1 0
.........................................................................................................AGCACCACATGATTCGGCTTCC................................................. 22 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGCCTTT.................................................. 22 2 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGGCTTCTT................................................ 24 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGGCC.................................................... 20 1 1 1.00 1 0 1
........................................................................................................TAGCACCACGTGATTCGGCTT................................................... 21 1 1 1.00 1 0 1
........................................................................................................TATCACCACATGATTCGGCTT................................................... 21 1 1 1.00 1 1 0
........................................................................................................TAGCACCAAATGATTCGGCTTC.................................................. 22 1 1 1.00 1 0 1
........................................................................................................TAGCACCACATGCTTCGGCTT................................................... 21 1 1 1.00 1 0 1
........................................................................................................TAGCAACACATGATTCGGCTTC.................................................. 22 1 1 1.00 1 0 1
.........................................................................................................AGCACCACATGATTCGGCTTG.................................................. 21 1 1 1.00 1 1 0
..................................................GCCCGGATTCTGTGTATGCTGCGT...................................................................................................... 24 1 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGGCTTGGCG............................................... 25 2 1 1.00 1 1 0
........................................................................................................TAGCATCACACGATTCGGCTTC.................................................. 22 2 1 1.00 1 0 1
.........................................................................TTTGCTGATTTGCCATACAC................................................................................... 20 0 1 1.00 1 1 0
........................................................................................................TAACACCACATGATTCGGCTT................................................... 21 1 1 1.00 1 0 1
........................................................................................................TAGCAGCACATGATTCGGCTT................................................... 21 1 1 1.00 1 0 1
.........................................................................................................AGCACCACATGATTCGGC..................................................... 18 0 1 1.00 1 1 0
.........................................................................................................AGCACCACATGATTCGGCTTTG................................................. 22 1 1 1.00 1 1 0
........................................................................................................TAGAATCACATGATTCGGCTT................................................... 21 2 1 1.00 1 0 1
.................................................AGCCCGGATTCTGTGTGTGCTGC........................................................................................................ 23 0 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGGCTTCAT................................................ 24 1 1 1.00 1 0 1
.....................................................................................................ATTTAGCACCACATGATTCGGCTT................................................... 24 2 1 1.00 1 1 0
........................................................................................................TAGCACCACATAATTCGGCTTT.................................................. 22 2 1 1.00 1 0 1
........................................................................................................TAACACCACATGATTCGGC..................................................... 19 1 1 1.00 1 1 0
....................................................................................................CGAGTAGCACCACATGATTCGGCTT................................................... 25 3 1 1.00 1 1 0
......................................................................................................ATTAGCACCACATGATTCGGCTTC.................................................. 24 2 1 1.00 1 1 0
.........................................................................................................AGCACCACATGATTCGGCTG................................................... 20 1 1 1.00 1 1 0
........................................................................................................TAGCACCAAATGATTCGGCTT................................................... 21 1 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGGCTC................................................... 21 1 1 1.00 1 0 1
...................................................CCCGGATTCTGTGTGTGCTGC........................................................................................................ 21 0 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCTGCTTC.................................................. 22 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCCGCTT................................................... 21 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGGCTTCG................................................. 23 0 1 1.00 1 1 0
...................................................CCCGGATTCTGTGTGTGCTG......................................................................................................... 20 0 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATCCGGCTT................................................... 21 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGGCTTCCT................................................ 24 1 1 1.00 1 1 0
........................................................................................................TAGCACGACATGATTCGGCTTCT................................................. 23 2 1 1.00 1 0 1
.........................................................................................................AGCACCACATGATTCGGCTTA.................................................. 21 1 1 1.00 1 1 0
.........................................................................TTTGCTGATTTGCCATACACATAAATAT........................................................................... 28 0 1 1.00 1 1 0
......................................................................................................GGTAGCACCACATGATTCGGCTTC.................................................. 24 1 1 1.00 1 1 0
....................................................................................................CACGTAGCACCACATGATTCGGCTT................................................... 25 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTCGGCCTT.................................................. 22 2 1 1.00 1 1 0
........................................................................................................TAGCACCACATGGTTCGGC..................................................... 19 1 1 1.00 1 1 0
.................................................AGCCCGGATTCTGTGTGTGCTG......................................................................................................... 22 0 1 1.00 1 0 1
........................................................................................................TATCACCACATGATTCGG...................................................... 18 1 1 1.00 1 0 1
.........................................................................................................AGCACCACATGATTCGGCTTTT................................................. 22 2 1 1.00 1 1 0
.......................................................................................................ATAGCACCACATGATTCGGCTT................................................... 22 1 1 1.00 1 1 0
.......................................................................................................TTAGCACCACATGATTCGGCTTC.................................................. 23 1 1 1.00 1 1 0
........................................................................................................TAGTACCACATGATTCGGCTT................................................... 21 1 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATTAGGCTT................................................... 21 1 1 1.00 1 1 0
.......................................................................................................GTAGCACCACATGATTCGGCTT................................................... 22 0 1 1.00 1 1 0
........................................................................................................TAGCACCACATGATCCGGCT.................................................... 20 1 1 1.00 1 0 1
........................................................................................................TAGCACCACATGATTCGCCTTC.................................................. 22 1 1 1.00 1 0 1
........................................................................................................TAGCACCAAATGATTCGGCTTT.................................................. 22 2 1 1.00 1 0 1

Anti-sense strand reads

GTTAGCAATAGGGTCTACAGGAACTGCTTACAGTTTACGACATGTCACTTCGGGCCTAAGACACACACGACGCAAACGACTAAACGGTATGTGTATTTATATGCATCGTGGTGTACTAAGCCGAAGCACCACGATCGTTGAGGTAGCGGTCAATCTATCTATTTAGTTAGTTCTAT

************************************.((((((((..(((((((.(((((.((((.(((((((((......((.((.....)).))......))))))))))))).))))))))))))..)))).))))..***********************************
Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_14830:1051284-1051459 + dgr_7 confident CAA----TCGTTATCCCAG------ATGTCCTTGACGAATGTCAAATG---------------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGATTTGCCATACACATAAATA----TACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA-A-----CTCC------AT-----------------CGCCAG-T---------T--AGA-TAGATA---------------AAT--CA-----ATCAA-GATA
droVir3 scaffold_13047:12148433-12148606 - dvi-mir-995 Known_mirbase GCG----GCATC---CTTG------ATGTCCTTGACGAATGTCAAACGGCTTGGCCGGCTC-AACA--------------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGC----TGTTT------------AGAGG----TACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA-A-----CTGCAACAGA--G-----G-G--CGTCAACGG----T---------ATTT------------------------------------ATTAA-TATA
droMoj3 scaffold_6540:29636939-29637125 + dmo_11 confident TT-------ATC---CTTG------ATGTCCTTGACGAATGTCAAACAGCTTGGCTGGCTT-GGTA--------------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGC----TGTTT-----------T--GAG----TACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT-C-----ATTCAACAAATTA-----G-G--CAT---CAA----T---------TTT--A-TAG--------ATTAATACGTGCC--AA-----TTCTA-TATT
droWil2 scf2_1100000004921:2305154-2305342 - dwi_4 confident CAT-----TACC---TATGCC----GTGTCCTTGACGAATGTCAAATTT----TCTGACTCCTGCAAC---TCATGTAAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGC----TACAA-----------CAAGAACTAAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGTC------AT-----------------CG-----T---------GTT--GA-AGACTTAA------------------------TCTTA-TCCA
dp5 2:5900229-5900397 + dps-mir-995 Known_mirbase CC-----------------------GCGTCCTTGACGAATGTCAAACACCT-CGCAGGCTC-TGCAGCAGACC-----CTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------C------TT-----------------CAG----T---------ATC--CA-AGTCGCATTCAT------------------------T-AATA
droPer2 scaffold_19:1637048-1637222 + dpe_4 confident CC-----------------------GTGTCCTTGACGAATGTCAAACACCT-CGCAGGCTC-TGCAGCAGACC-----CTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------C------TT-----------------CAG----T---------ATC--CA-AGTCGCATTCAT-------------TA-----ATACT-GACA
droAna3 scaffold_13340:13021640-13021802 - dan_14 confident CGA----GCATC---CTTTAA----GTGTCCTTGACAAATGTCATTCGC--------------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGC----CGTTC-----------TTTCTA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------C------ATCCTGTTGGCTG--ACAC---AAGAAATTC--------------GCCA---------------AAAG---------------TAA
droBip1 scf7180000396691:1899360-1899529 - CAA----GCATC---CTTTAA----GTGTCCTTGACAAATGTCATTCGC--------------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGC----CGTTT----TTT--TCTGGCTA----ACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------C------ATCTTGTAATTTG--TCAA---AAGAAATTC--------------TC----------------------CA-----AACAA-CAAT
droKik1 scf7180000302307:196865-197037 - TC-------ATC---ATTGGC----GTGCCCTCGGCAAATGTTTTTCAC--------------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGC----TGTTC----CCC-TTTCCGCCA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAG--------C------ATCC-ACGGATCG--CCAC---CCGGAATTACCCGAAAAG------------------------------------TTCACAAAAA
droFic1 scf7180000453930:227818-227974 - T----------C---CTGGAC----GTGTCTTTGGCGAGTGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGC----TGTTT----ATA-C-TCCAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAG--------C------AT-----------------CGG----C---------TGTAGC-CATAAA---------------GCC--TA-----CCCAA-TATT
droEle1 scf7180000491080:437422-437599 + TG-----GCATC---CTGGGC----GTGCCCTTGGCGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGC----TGCTT----CTA-CTATCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AC-----------------CGG----A---------TTG--CATAGTCAGAGTTACCA------ATGGTTATCTTTATTTA-TTCA
droRho1 scf7180000779659:137846-138011 + TAA--TATGTGT-ATACTG------GCGTCCTGGGCGAATGTCCTTCGC--------------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGC----TGCTT----CTT-TTCTCAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AT-----------------CGG----C---------TTC--CAAAGCCA---CCAT-------------TA-----CACAC-AATA
droBia1 scf7180000302402:9398394-9398553 + -------------------------GTGTCCTTGGTGAATGTCAATCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTT----CTACCTCCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAG--------C------ATCGCGTG---CT--CCAA---CTACAGCCAACAGAAAAA------------------------------------GCTAT-AATA
droTak1 scf7180000415409:611545-611684 + T----------C---CTGGGC----GTGTCCTTGGCGAATGTCACCCAC--------------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGC----TGTTT----CTG-CCGCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AT-----------------C-------------------------------------------------TA-----ATCTC-TACA
droEug1 scf7180000409542:620344-620486 - TCG--TAGCCTC---CTGGGT----GTGTCCTTGGCGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTT----GTG-ATTCTAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAG--------C------AT-----------------CAG----A---------TTT-----------------------------------------------
dm3 chr3R:16561622-16561769 + dme-mir-995 Known_mirbase TA-----------------------TTATCCTTGACGAATGTCATCCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCGTAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCAA---------------ACGGGTA-----ATCAC-GATT
droSim2 3r:4744563-4744708 - dsi-mir-995 Known_mirbase CAA----GCAT------AG-------------GAAGAAATGTCGTTCAC--------------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCCA---------------GCC--AG-----TCCAC-GATT
droSec2 scaffold_27:174243-174377 - dse_20 confident A------------------------------------AATGTCGTTCAC--------------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCGAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCCA---------------GCGGGTA-----TCCAC-GATT
droYak3 3R:5351027-5351178 + dya_10 confident TT-------ATC---CTGGACGTTGCCATCCTGGATTAAACTCATTCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CTAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------C------AG-----------------CAA----T---------TTTTGG-TAGCCA---------------ATCG---------------TTA
droEre2 scaffold_4770:5101886-5102040 - der_22 confident CATGTTATTATC---TTGGAC----GCGTTCCTGACGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----TGTTT-----------TCAGGA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------C------AG-----------------CGG----T---------TTTTGC-TAGACA---------------ACGG---------------TTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CAA----TCGTTATCCCAG------ATGTCCTTGACGAATGTCAAATG---------------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGATTTGCCATACACATAAATA----TACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA-A-----CTCC------AT-----------------CGCCAG-T---------T--AGA-TAGATA---------------AAT--CA-----ATCAA-GATASizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................2112162.0021621466696
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................221229.00229127102
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................221211.0021117338
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................201141.0014110239
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................20190.0090900
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................19121.0021192
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................21116.0016151
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................23116.001697
.............................................................................................GCCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................23115.0015114
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................23113.001358
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21113.0013130
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18111.0011110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................23111.0011110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2216.00633
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................1915.00550
........................................................................................................................................................AGCACCACATGATTCGGCTTC...................................................................................................................2115.00550
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCC..................................................................................................................2314.00422
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................1914.00431
.............................................................................................GCCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................2114.00431
............................................................................................AGCCCGGATTCTGTGTGTGCT...............................................................................................................................................................................2113.00321
....................................................................................................................TTTGCTGATTTGCCATACACAT......................................................................................................................................................2213.00330
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................2113.00330
.............................................................................................GCCCGGATTCTGTGTGTGCTGCGT...........................................................................................................................................................................2412.00220
.............................................................................................GCCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................2212.00211
............................................................................................AGCCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................2412.00211
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................2212.00220
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................2111.00110
...............................................................................................CCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................2111.00110
.....................................................................................................................TTGCTGATTTGCCATACACAT......................................................................................................................................................2111.00110
........................................................................................................................................................AGCACCACATGATTCGGCTTCC..................................................................................................................2211.00110
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2011.00101
........................................................................................................................................................AGCACCACATGATTCGGCTTG...................................................................................................................2111.00110
....................................................................................................................TTTGCTGATTTGCCATACAC........................................................................................................................................................2011.00110
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................1811.00110
............................................................................................AGCCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................2311.00101
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................2011.00110
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2111.00101
..............................................................................................CCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................2111.00110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................2311.00110
..............................................................................................CCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................2011.00110
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................2111.00110
....................................................................................................................TTTGCTGATTTGCCATACACATAAATA----T............................................................................................................................................2811.00110
............................................................................................AGCCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................2211.00101
........................................................................................................................................................AGCACCACATGATTCGGCTTTT..................................................................................................................2211.00110
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................2211.00110
droVir3
GCG----GCATC---CTTG------ATGTCCTTGACGAATGTCAAACGGCTTGGCCGGCTC-AACA--------------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGC----TGTTT------------AGAGG----TACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA-A-----CTGCAACAGA--G-----G-G--CGTCAACGG----T---------ATTT------------------------------------ATTAA-TATASizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211460912.00460912628428197159401743875799909359636599422432612275473662751443613911662629382119014165104228709126271223543173262179946771018816151163312756991298741185519058491868144314149911787145815183112196335083468219922261828927710906259510182041678203531416818083141906580196841852712869147401852420185656552335554995510032
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................22129088.00290883871151128618464179232451911315874372492662684226312288738750552854687683766399119763621477882081775291924534575651395241447353115109847460322230777112243127243110951053604626629477475620639515301338674714
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................20121100.00211002339706257472917628041566721169528420212299139675390319421417404352183515412217540565566434683209681611649888128109117187102244179110115895547681756822866078898985930925827317616931322133855666610061008
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................22113944.00139448413025132513716134212461262217243955813931840128341536096914613946437540578651568469375714612190598873601265511510062605041236023136094105674586188581516323439464614180151155334349
.............................................................................................GCCCGGATACTGTGTGTGTTGC.............................................................................................................................................................................2216041.006041101312531851157422700000014029851215117633374110651111101231100010110155508727530842526251913312229091292911861280
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................2215507.0055074242625623712615510603412402201915825720238545249463356173505133189118171583812021220034455411153111276016183916114861625810698121281226
.............................................................................................GCCCGGATACTGTGTGTGTTG..............................................................................................................................................................................2113749.0037490039611171644420237258100110140214211856242534154017835193334141000010200100000000004560415246266328422924282024305365361489528
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................2213607.0036074146124411821144400300000001201332419402138441660246223933304281141153054151123645003116111012815611137367295329260357413224451113101
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................2313409.00340911711312311240000423400100050043130731316155421543126132305198841218411223437232000105000714135733676516425322945807267109129
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................2113147.00314734191488518327512011060000001400591324914136132262710531051122409020491923281614121117311521187711021780107311898927126108108129105102445213922
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2112731.0027313533264511342018160000000000000830228910105645132723286575312635123443323333410341630022624162230111322401313151417
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................2412359.0023591011820120200000620000000002212335160250001900731252601049100210010120201000001200094472952304612196813123055398090
.............................................................................................GCCCGGATACTGTGTGTGTTGCAA----.......................................................................................................................................................................2411768.00176800110000100100000000000000120000303100210020000000000000000000000014012911428425690280270326364
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................2311633.0016331444541761062302026041341223452020143524861197423524272631402641300010322111153111001106409195563211198119182215173826
.............................................................................................GCCCGGATACTGTGTGTGTTGCG............................................................................................................................................................................2311434.001434112021122123105100000000050241071471215921110351011251816201428814943510051330410253216014479851071882989793430
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................2311416.00141631193361766000012300000040034252030212427115133734336339318475354628411187470011461004146486502842332040393726255275
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................2111182.00118221835125256010120000010000801880103222118000205630747730997764129331000413717333937212060245112730
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................1911177.001177253328281402000002010232122011211419242186253022924232083433603335464143110434405643939187662604563511520213859
.............................................................................................GCCCGGATACTGTGTGTGTTGCA............................................................................................................................................................................2311167.0011670000000000003010000000000011000100000000000000000000000000000100070633900000132250227234243
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................2011069.001069059052350400000210000001004327710031058456100000000010000010002110711200922511501014
...........................................................TC-AACA--------------GCTGTACAACGAA...................................................................................................................................................................................................191520.0052000101240000022000100400523592102810405600000000000000000000400000404053283527123732424104541
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................241414.0041410451440000000000000001004241019413551201022191315100000000000200000002000344445147141408851317
.............................................................................................GCCCGGATACTGTGTGTGTTGCAA----A......................................................................................................................................................................251385.00385000000000000310000000000000000001011010000000000000000000000000003335273000101946577581
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................201385.0038510911020000000000000100210420101111119685001100010000100000011000003034150110001544465561
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................201333.00333331465109100000000000000010001000220400000031010000010000101000000000072000012520110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCC..................................................................................................................231268.0026837033114150000000000000230072112221372102300006210000000000000000010002050000110261000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................231256.00256009730100000100000003005557411115301168918616700000000101010100012120901013330142311044
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................231246.0024620143204000000010000050080013101161251021016141340000000000010000000400042813120010004151268
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................231243.00243130714300000000000000220040132303214470201020411000000000000000001000500050000001500311
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................231241.002418016151100000000000000100085165181910362601121112000000000000000000010400044222224722036
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................211211.0021100106000000000000000000022141000010325550100000000000000000000000023257000000425212929
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................181196.001960030104100100000000030158710851046100128118111000000000000000000001006171142000000111410
.............................................................................................GCCCGGATACTGTGTGTGTT...............................................................................................................................................................................201153.001530022000012010100000000010001011010120100000000000000000000030000091013100010717162533
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................181150.00150610101102010000100000010042104110010232010000001000000100130202000143115149482140010
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................221148.0014810215200000001000000000041028100035179225100000000000000000000000106318303000103200
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................231145.0014500241100000001000000000064210100002034332300000000000000000000000004084100000100012
...........................................................................................................................................................ACCACATGATTCGGCTT....................................................................................................................171133.001330000000000000000000000000000000000000000000000002010000320000000118111700000041131221
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................191126.0012603435302000001000000000123044110043222460000000000000000110011001200024435101021
.............................................................................................................................................................CACATGATTCGGCTT....................................................................................................................151124.0012400000000000000000000000000000000000000001753057818611813215461400000000000000000000
............................................................................................................................................................CCACATGATTCGGCTT....................................................................................................................161108.0010800000000000000000000000000000000000000007106414421441555205231500000000000000000000
.............................................................................................GCCCGGATACTGTGTGTGTTGA.............................................................................................................................................................................221107.0010700000000010010000000000101000000000020000000000000000000000000000813711100159102421
.............................................................................................GCCCGGATACTGTGTGTGT................................................................................................................................................................................191104.00104000000001000000000000000010000000000100000000000000000000000000009614131123128121217
.............................................................................................GCCCGGATACTGTGTGTGTTGAAA----.......................................................................................................................................................................24192.009200000000000000000000000010000000000010000000000000000000000000000414624201481561410
.......................................................................................................................................................TAGCACCACATGATTCGGCTCT...................................................................................................................22191.009112022031002000000000060010110312416010030210000001000000000000001000100000011001102
..........................................................CTC-AACA--------------GCTGTACAACGAA...................................................................................................................................................................................................20189.0089000110100000020000000000000100005003022000000000000000000000000001681627835121011
...........................................................................................................................................................ACCACATGATTCGGCTTT...................................................................................................................18188.0088230020500000001000000003201100011021200100000000000000000000000012037661291120001
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21186.008600735000000000000000000000000000020100001000000000000000000000000001100000000011
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................20178.0078153800000000000000000000000000000000000000001010010002241011101000022001010200100
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................23172.00723063013000000000000010011010133621122030000000000000000000000000182242021011013
.............................................................................................GCCCGGATACTGTGTGTGTTGCGC----TG.....................................................................................................................................................................26169.006910000000000000000000000000010000000000000000000000000000000000001000101660181600000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAG.................................................................................................................24165.0065002110000000000000000000100013111001003000000000000000000000010001014500010031158
.............................................................................................GCCCGGATACTGTGTGTGTTGT.............................................................................................................................................................................22163.0063000000000001220000001000100001000000111000000000000000000000000003531002101381411
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................22159.00591081001000001000000010011231351530111490000000001000000000000000300000000010000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................23158.00587101000000000000000030011010101102001010010000000001000000100100042047142501020
.............................................................................................GCCCGGATACTGTGTGTGTTA..............................................................................................................................................................................21157.00570000000000000100000000000001000000101000000000000000000000000000076700000038877
...........................................................................................................................................................ACCACATGATTCGGCTTA...................................................................................................................18152.00521000100000000000000000000010000110110030000000000000000000000000002063636840022
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.................................................................................................................24145.00450021000000000000000000001020603410110001000000000000010000000000063000000003315
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTC.................................................................................................................24145.00451022111000000000000040010020542803010002000000010000000000000000000100011001000
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22144.004400240000000000000000000000001000000010000000000010011100100000000000000000003181
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTCC.................................................................................................................24143.004310100000000000000000000011000563804000000000000000000000000000100100000200000000
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19140.004000282100100000000000000001100000010100100000000000000000000000000200000010000000
.............................................................................................GCCCGGATACTGTGTGTGTTGAA............................................................................................................................................................................23139.00390000000000000000000000000000000000000000000000000000000000010000034612000064255
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTG.................................................................................................................24132.00320030000000000000000010010000242300000100000000000000000000000000030230201002011
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCAA.................................................................................................................24131.00310020000000011000000000030000000010002300000000000000000000000000073000020011022
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGA..................................................................................................................23131.00312232000000000000000010011000000000000100000000000000000000000000004201000012152
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................22130.003062100000000001000000000000000000000000000000000000000000000001000000001000000000
.............................................................................................GCCCGGATACTGTGTGTGTTT..............................................................................................................................................................................21128.00280000100011011100000000010101000000200000000000000000000000000000023400000011033
.......................................................................................................................................................TAGCACCACATGATTCGGCTTACA.................................................................................................................24127.00270000001000000000000000010101000000058520010000000000000000000000001000000001000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAC.................................................................................................................24127.00270011000000000000000000000000000010010000000000000000000000000000066300000010124
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTCA.................................................................................................................24126.00260022100000001000000000030002010000111001000000000000000000000000003000010001041
.............................................................................................GCCCGGATACTGTGTGTGTTAAA............................................................................................................................................................................23126.00260000000000000000000000000000000000001000000000000000000000000000045200000002057
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAG.................................................................................................................24126.00260010000000000000000000021010000010102000000000000000000000000000023022001322000
.............................................................................................GCCCGGATACTGTGTGTGTTGCAT----.......................................................................................................................................................................24126.00260000000000000000000000000000000000000000000000000000000000000000001100000054546
.............................................................................................GCCCGGATACTGTGTGTG.................................................................................................................................................................................18125.00250001000100000000000000100000020100000010000000000000000000000000000120502012023
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22124.00241301100001000000000110000000111001110011001000000000000000001000020000001010001
.............................................................................................GCCCGGATACTGTGTGTGTTAA.............................................................................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000003600000053043
.......................................................................................................................................................TAGCACCACATGATTCGGAA.....................................................................................................................20122.00220000000000000000000000000000000000000000000000000000000000000000033300000002074
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................23122.00220012101000000000000000010021100110101020000000000000001001000000011000000100001
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................21122.002201122001000000000000000000010000020000000000000000000000000000002000000000001000
.............................................................................................GCCCGGATACTGTGTGTGTTGCAG----.......................................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000002000000003627
........................................................................................................................................................AGCACCACATGATTCGGCTTC...................................................................................................................21119.001900161000000000000000000000000000000000010000000000000000000000001000000000000000
................................................................................................CGGATACTGTGTGTGTTGCG............................................................................................................................................................................20118.00180000000000000000000000000000010000000000000000000110000000000000000050043300000
.......................................................................................................................................................TAGCACCACATGATTCGGAAA....................................................................................................................21117.00170000000000000000000000000000000000001000000000000000000000000000023000000003143
............................................................................................................................................................CCACATGATTCGGCTTA...................................................................................................................17116.00160000000000000000000000000000000000000000000100000000000000000000011400000022131
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCTC.................................................................................................................24116.00165010110000000000000000000100000201000000000000000000000000000000000000201000001
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGAA.................................................................................................................24116.00160000000000001000000000000010000100000110000000000000000000000000032100000001031
.......................................................................................................................................................TAGCACCACATGATTCGGCTCA...................................................................................................................22116.00160001200000000000000000001000001200022100000000000000000000000000020000000000110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTATA.................................................................................................................24115.00150010000000000000000000010010110000023110000000000000000000000000020000000001000
.............................................................................................GCCCGGATACTGTGTGTGTTGCT............................................................................................................................................................................23115.00150002000000000000000000000000000000000000000000000000000000000000012200000001322
..............................................................................................CCCGGATACTGTGTGTGTTGC.............................................................................................................................................................................21114.00140020000000000000000000000000000000000000000000000000000000000000000210102000132
.......................................................................................................................................................TAGCACCACATGATTCGGA......................................................................................................................19114.00140000000010000000000000010000000000000100000000000000000000000100031000000011013
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................21114.00143004000000000000000020000000000000000000000000000000000000000000000000003010001
.............................................................................................GCCCGGATACTGTGTGTGTTGCC............................................................................................................................................................................23113.00130000000000000000000020000010110001000000000000000000000000000000001000000102120
...........................................................................................................................................................ACCACATGATTCGGCTTC...................................................................................................................18113.00134000100000000000000000000000000100000000000000000000000000000000000000103300000
............................................................................................................................................................CCACATGATTCGGCTTT...................................................................................................................17113.00130000000000000000000000000000000000000000012101000011010100000000000100000010011
............................................................................................................................................................CCACATGATTCGGCT.....................................................................................................................15112.00120000000000000000000000000000000000000000002001101140001001000000000000000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................22112.00121300000000000000000000010000001000100010000000000000000000000000010100100000001
............................................................C-AACA--------------GCTGTACAACGAA...................................................................................................................................................................................................18112.00120000000000000000000000020000000000000000000000000000000000000000000012030300010
..............................................................................................CCCGGATACTGTGTGTGTTGCG............................................................................................................................................................................22112.00120020000000000000000000000000000000000000000000000000000000000000000021110500000
.......................................................................................................................................................TAGCACCACATGATTCGGCAAA...................................................................................................................22111.00110000000000000000000000001010000000001000000000000000001000000000003000000003100
.......................................................................................................................................................TAGCACCACATGATTCGGCAC....................................................................................................................21110.00100001000000000000000000000000000000000000000000000000000000000000011000000001231
droMoj3
TT-------ATC---CTTG------ATGTCCTTGACGAATGTCAAACAGCTTGGCTGGCTT-GGTA--------------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGC----TGTTT-----------T--GAG----TACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT-C-----ATTCAACAAATTA-----G-G--CAT---CAA----T---------TTT--A-TAG--------ATTAATACGTGCC--AA-----TTCTA-TATTSizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211338328.00338328405772388362943432860321359
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................21116664.0016664204911166173
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................22115042.001504219881253504351209252
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2018620.0086209411354215136494116
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2213762.003762745364452286916
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................2012700.00270020631326301
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................2211980.00198030172026158442
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................2211419.00141925745506110015
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2011134.001134010011330
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211995.0099512961398641
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................231933.0093339213045222
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211789.007893088734612
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................241577.00577473300974
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................231538.00538801117214063
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191309.0030958818122103
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................231233.00233434111831
.............................................................................................GCCCGGGTTTTGTGTGTGCCGCG............................................................................................................................................................................231180.001808303937633
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................211138.00138105000330
.............................................................................................GCCCGGGTTTTGTGTGTGCCG..............................................................................................................................................................................211131.00131122531321912
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................191129.0012963011613
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................24174.007450000240
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22168.006836101282
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19161.006151000100
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................21159.005947000120
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22157.00575400030
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................23154.00549010440
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23154.005417011341
........................................................................................................................................................AGCACCACATGATTCGGCTC....................................................................................................................20152.00522000500
.............................................................................................GCCCGGGTTTTGTGTGTGCCGC.............................................................................................................................................................................22144.00444860233
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22141.00410141332
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18137.003712412441
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................18133.003314001171
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................21132.00320000320
........................................................................................................................................................AGCACCACATGATTCGGCTTAAA.................................................................................................................23128.00282800000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................23126.00264211180
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................23125.00251600072
........................................................................................................................................................AGCACCACATGATTCGGCTTAA..................................................................................................................22124.00242300010
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20124.00246102123
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGG..................................................................................................................23123.00237000160
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................21122.00229000130
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................22120.00207000130
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................20119.00191900000
........................................................................................................................................................AGCACCACATGATTCGGCTTC...................................................................................................................21119.00191600030
.............................................................................................GCCCGGGTTTTGTGTGTGCC...............................................................................................................................................................................20118.0018125262
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................23118.00181200150
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................23115.0015600090
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................23114.0014900032
........................................................................................................................................................AGCACCACATGATTCGGCTTG...................................................................................................................21113.00131000030
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGA..................................................................................................................23112.0012401070
.......................................................................................................................................................TAGCACCACATGATTCGGCTGC...................................................................................................................22112.00120000120
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................22111.0011111170
.......................................................................................................................................................TAGCACCACATGATTCGGCAC....................................................................................................................21110.00100000100
.........................................................................................................................................................GCACCACATGATTCGGCTC....................................................................................................................19110.00100000100
.........................................................................................................................................................GCACCACATGATTCGGCTTT...................................................................................................................2019.009500040
droWil2
CAT-----TACC---TATGCC----GTGTCCTTGACGAATGTCAAATTT----TCTGACTCCTGCAAC---TCATGTAAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGC----TACAA-----------CAAGAACTAAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGTC------AT-----------------CG-----T---------GTT--GA-AGACTTAA------------------------TCTTA-TCCASizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211202227.002022271763891330790086342997
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2016359.006359449747966816501
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................2215641.005641410882743427236
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................2111899.001899181478043
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2111240.001240121911163
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2211082.001082743158715123
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................2211063.00106383161911151
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................201690.0069020657166
....................................................................................................................C----TACAA-----------CAAGAACTAAGACG.........................................................................................................................................201481.0048111337799
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................201441.004414410000
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211440.00440307661588
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................221384.003843272031816
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191311.003112252503130
.............................................................................................GCCCGGATTCTGCGAGTGCTGCG............................................................................................................................................................................231234.00234017517141
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................231125.0012576332113
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................20199.0099990000
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................18181.0081698022
.............................................................................................GCCCGGATTCTGCGAGTGCTG..............................................................................................................................................................................21149.00494142227
.............................................................................................GCCCGGATTCTGCGAGTGCTGC.............................................................................................................................................................................22147.00470402221
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................22146.0046460000
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................19145.00451427130
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................23142.0042314142
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21138.0038137000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................23138.0038740198
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18137.00371110178
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19128.0028027001
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22125.0025222010
.......................................................................................................................................................TAGCACCACATGATTCGGCGG....................................................................................................................21122.0022220000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTG..................................................................................................................23118.0018162000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................22115.0015141000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22115.0015132000
...........................................................................................................................................................ACCACATGATTCGGCTTT...................................................................................................................18213.0026251000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCC..................................................................................................................23113.001373201
..........................................................................TGTAAGGCTTCACCAAGCA...................................................................................................................................................................................................19112.0012000120
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................23111.001128001
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................23111.001190011
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23110.001023140
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................2119.00908010
.........................................................................................................................TACAA-----------CAAGAACTAAGACG.........................................................................................................................................1918.00801070
.............................................................................................GCCCGGATTCTGCGAGTGCTGCGT----.......................................................................................................................................................................2418.00800224
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................2318.00861010
............................................................................................AGCCCGGATTCTGCGAGTGCTGC.............................................................................................................................................................................2317.00700043
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTCC.................................................................................................................2417.00713003
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................2017.00722030
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................2016.00606000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTT..................................................................................................................2316.00660000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................2215.00523000
...........................................................................................................................................................ACCACATGATTCGGCTTA...................................................................................................................1815.00550000
.......................................................................................................................................................TAGCACCACATGATTCGGAC.....................................................................................................................2014.00440000
........................................................................................................................................................AGCACCACATGATTCGGCTTC...................................................................................................................2114.00404000
.............................................................................................GCCCGGATTCTGCGAGTGCT...............................................................................................................................................................................2014.00411101
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................2114.00440000
............................................................................................AGCCCGGATTCTGCGAGTGCTGCG............................................................................................................................................................................2414.00401030
............................................................................................AGCCCGGATTCTGCGAGTGCTG..............................................................................................................................................................................2213.00321000
..........................................................................................................................................................CACCACATGATTCGGCTTT...................................................................................................................1913.00311001
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCCC.................................................................................................................2413.00303000
.............................................................................................GCCCGGATTCTGCGAGTGCTGT.............................................................................................................................................................................2212.00200002
...........................................................................................CAGCCCGGATTCTGCGAGTGCTG..............................................................................................................................................................................2312.00210010
............................................................................................................................................................................CATGGTGAAGTACATCGC..................................................................................................1812.00200020
.......................................................................................................................................................TAGCACCACATGATTCGTT......................................................................................................................1912.00201001
................................................................................................................................................TAAGACGTAGCACCACATGATTCGGCT.....................................................................................................................2712.00211000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2212.00210010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAG..................................................................................................................2312.00211000
............................................................................................AGCCCGGATTCTGCGAGTGCT...............................................................................................................................................................................2112.00200110
....................................................................................................................C----TACAA-----------CAAGAACTAAGAC..........................................................................................................................................1912.00200020
...............................................................................................................................................CTAAGACGTAGCACCACATGATTC.........................................................................................................................2412.00200110
..............................................................................................CCCGGATTCTGCGAGTGCTGCG............................................................................................................................................................................2212.00202000
................................................................................................................................................TAAGACGTAGCACCACATGATTCGGC......................................................................................................................2612.00202000
........................................................................................................................................................AGCACCACATGATTCGGCTTCA..................................................................................................................2212.00200011
............................................................................................AGCCCGGATTCTGCGAGTGC................................................................................................................................................................................2011.00100010
.............................................................................................GCCCGGATTCTGCGAGTGCTGG.............................................................................................................................................................................2211.00110000
.............................................................................................GCCCGGATTCTGCGAGTGC................................................................................................................................................................................1911.00100010
dp5
CC-----------------------GCGTCCTTGACGAATGTCAAACACCT-CGCAGGCTC-TGCAGCAGACC-----CTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------C------TT-----------------CAG----T---------ATC--CA-AGTCGCATTCAT------------------------T-AATASizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211124101.0012410154078973786496774780340031115277123213
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................2216796.00679685522425137594376283553320
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2016695.00669544492555048316932616217514
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................2015429.0054291541165420000
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................2112052.002052261102679107753719520
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................221546.0054615405323314317720
.............................................................................................GCCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................211528.00528345751168184151
.............................................................................................GCCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................231526.005261251771096319131028
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211519.0051984393871863000
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191518.005181421914498141202114
.......................................................................................................................................................TAGCACCACATGATTCGGCTGC...................................................................................................................221464.00464131889410445180200
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTT..................................................................................................................231400.00400183216182720170
........................................................................................................................................................AGCACCACATGATTCGGCTGT...................................................................................................................211365.00365036201000011
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................191274.00274027301000000
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................201199.001992110293010000
.........................................................................................................................................................GCACCACATGATTCGGCTG....................................................................................................................191198.00198119500110000
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................211184.0018431512722962000
.............................................................................................GCCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................221165.00165110616111333426
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................221154.0015420782129210210
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................221127.001271763111251000
......................................................................................................................................................GTAGCACCACATGATTCGGCTG....................................................................................................................221122.00122012200000000
.............................................................................................GCCCGGATTCTGTGTGTGCT...............................................................................................................................................................................20186.008617310541010
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTAA.................................................................................................................24178.007807331010000
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18177.007703311101415021
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTA..................................................................................................................23159.005934353001400
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20157.005704921300200
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................20157.005705601000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAA..................................................................................................................23150.005013583000300
..........................................................................................................................................................CACCACATGATTCGGCTG....................................................................................................................18149.004903200476000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................21138.003813430000000
..............................................................................................CCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................20138.003803800000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAAA.................................................................................................................24136.003613220100000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTC..................................................................................................................23130.00306715035030
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................20128.002802800000000
........................................................................................................................................................AGCACCACATGATTCGGCTGTT..................................................................................................................22126.002602600000000
........................................................................................................................................................AGCACCACATGATTCGGCTGA...................................................................................................................21125.002502401000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................22124.002401461101001
..............................................................................................CCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................22122.002201900010002
.............................................................................................GCCCGGATTCTGTGTGTGCTA..............................................................................................................................................................................21118.001801710000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22116.001601330000000
.............................................................................................GCCCGGATTCTGTGTGTGC................................................................................................................................................................................19116.001601021020010
.............................................................................................GCCCGGATTCTGTGTGTGCTGT.............................................................................................................................................................................22115.001501110002010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................23114.00140922010000
........................................................................................................................................................AGCACCACATGATTCGGCTGC...................................................................................................................21113.001301300000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTTA.................................................................................................................24112.00121830000000
.........................................................................................................................................................GCACCACATGATTCGGCTGT...................................................................................................................20112.001201110000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTCC.................................................................................................................2419.0095002011000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................2319.0090440100000
..............................................................................................CCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................2119.0090900000000
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................2118.0080800000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................2318.0080700001000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGGT..................................................................................................................2318.0080000240200
.......................................................................................................................................................TAGCACCACATGATTCGGT......................................................................................................................1917.0070700000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCA..................................................................................................................2317.0070110311000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCT..................................................................................................................2317.0070000511000
........................................................................................................................................................AGCACCACATGATTCGGCTAA...................................................................................................................2117.0070700000000
..............................................................................................CCCGGATTCTGTGTGTGCT...............................................................................................................................................................................1917.0070700000000
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................2116.0060600000000
......................................................................................................................................................GTAGCACCACATGATTCGGCTGT...................................................................................................................2316.0060600000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................2215.0050410000000
.............................................................................................GCCCGGATTCTGTGTGTGCTGCGC----.......................................................................................................................................................................2415.0050400000010
.............................................................................................GCCCGGATTCTGTGTGTGCTT..............................................................................................................................................................................2115.0050400010000
.............................................................................................GCCCGGATTCTGTGTGTGCTGA.............................................................................................................................................................................2215.0050210000110
.............................................................................................GCCCGGATTCTGTGTGTGCTGCGT----.......................................................................................................................................................................2414.0040400000000
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................1814.0040400000000
........................................................................................................................................................AGCACCACATGATTCGGCTGAA..................................................................................................................2214.0040400000000
.............................................................................................GCCCGGATTCTGTGTGTGCTGCC............................................................................................................................................................................2314.0040030010000
........................................................................................................................................................AGCACCACATGATTCGGCAA....................................................................................................................2014.0040400000000
..........................................................................................................................................................CACCACATGATTCGGCTGT...................................................................................................................1914.0040400000000
.........................................................................................................................................................GCACCACATGATTCGGCT.....................................................................................................................1814.0040400000000
.......................................................................................................................................................TAGCACCACATGATTCGGCAC....................................................................................................................2114.0040220000000
........................................................................................................................................................AGCACCACATGATTCGGCTGG...................................................................................................................2114.0040400000000
........................................................................................................................................................AGCACCACATGATTCGGCTGTA..................................................................................................................2223.5070700000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGGC..................................................................................................................2313.0030200010000
...........................................................................................................................................................ACCACATGATTCGGCTGT...................................................................................................................1813.0031200000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCTG.................................................................................................................2413.0030100020000
........................................................................................................................................................AGCACCACATGATTCGGCA.....................................................................................................................1913.0030300000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2213.0030210000000
.......................................................................................................................................................TAGCACCACATGATTCGGCGT....................................................................................................................2113.0030110100000
.......................................................................................................................................................TAGCACCACATGATTCGGAC.....................................................................................................................2013.0030021000000
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................2013.0031010100000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAT..................................................................................................................2313.0030101100000
.......................................................................................................................................................TAGCACCACATGATTCGGCCT....................................................................................................................2113.0030111000000
.......................................................................................................................................................TAGCACCACATGATTCGGTA.....................................................................................................................2013.0030200100000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCC..................................................................................................................2312.0020100010000
.............................................................................................GCCCGGATTCTGTGTGTGCTAAA............................................................................................................................................................................2312.0020200000000
droPer2
CC-----------------------GTGTCCTTGACGAATGTCAAACACCT-CGCAGGCTC-TGCAGCAGACC-----CTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------C------TT-----------------CAG----T---------ATC--CA-AGTCGCATTCAT-------------TA-----ATACT-GACASizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211118009.001180099513513758254527313631209
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2012555.00255574176110022768046
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................2212290.0022906235423125180340
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211959.0095972110863144112
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................201803.00803177742325
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................221669.0066936011510451354
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................221377.00377302101212410
.......................................................................................................................................................TAGCACCACATGATTCGGCTGC...................................................................................................................221354.0035421853910640
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211331.003311721458330
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191303.003032532576120
.............................................................................................GCCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................211152.001521538051480
.............................................................................................GCCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................231100.0010017819161822
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTT..................................................................................................................23185.0085372402157
..........................................................................................................................................................CACCACATGATTCGGCTG....................................................................................................................18184.00846580371
.........................................................................................................................................................GCACCACATGATTCGGCTG....................................................................................................................19175.007546244100
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................20161.00615900011
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAA..................................................................................................................23155.00554291030
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTA..................................................................................................................23150.00503460370
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................21143.004324421120
........................................................................................................................................................AGCACCACATGATTCGGCTGT...................................................................................................................21143.00430430000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAAA.................................................................................................................24141.00413280001
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19141.00410390020
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18134.003414214112
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................22132.00322161121
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................20126.00262400020
.......................................................................................................................................................TAGCACCACATGATTCGGCTGGT..................................................................................................................23125.00251115170
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTAA.................................................................................................................24123.00231670000
.............................................................................................GCCCGGATTCTGTGTGTGCTGC.............................................................................................................................................................................22122.0022342238
......................................................................................................................................................GTAGCACCACATGATTCGGCTG....................................................................................................................22121.00210210000
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20119.00194120120
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTC..................................................................................................................23115.0015310281
.............................................................................................GCCCGGATTCTGTGTGTGCT...............................................................................................................................................................................20114.0014030128
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................22114.00141200110
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCT..................................................................................................................23112.0012020190
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................21112.00120120000
........................................................................................................................................................AGCACCACATGATTCGGCTGA...................................................................................................................21111.00110110000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................2217.007160000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGGC..................................................................................................................2316.006002130
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................2016.006060000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCA..................................................................................................................2315.005400010
.......................................................................................................................................................TAGCACCACATGATTCGGCAC....................................................................................................................2114.004310000
.......................................................................................................................................................TAGCACCACATGATTCGGCTCG...................................................................................................................2214.004000040
........................................................................................................................................................AGCACCACATGATTCGGCTGC...................................................................................................................2114.004040000
..............................................................................................CCCGGATTCTGTGTGTGCTGCG............................................................................................................................................................................2214.004020011
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTAC.................................................................................................................2423.507700000
........................................................................................................................................................AGCACCACATGATTCGGCTGG...................................................................................................................2113.003200010
..............................................................................................CCCGGATTCTGTGTGTGCTG..............................................................................................................................................................................2013.003030000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTTA.................................................................................................................2413.003120000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................2313.003300000
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................2113.003030000
.............................................................................................GCCCGGATTCTGTGTGTGCTA..............................................................................................................................................................................2113.003030000
....................................................................................................................C----TGTGT---------TCTTAAAA----GCCG.........................................................................................................................................1813.003201000
.............................................................................................GCCCGGATTCTGTGTGTGCTGA.............................................................................................................................................................................2213.003300000
.......................................................................................................................................................TAGCACCACATGATTCGGCTCT...................................................................................................................2212.002010010
.........................................................................................................................................................GCACCACATGATTCGGCT.....................................................................................................................1812.002020000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2212.002010010
.......................................................................................................................................................TAGCACCACATGATTCGGCTGAT..................................................................................................................2312.002100100
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTCA.................................................................................................................2412.002100001
.......................................................................................................................................................TAGCACCACATGATTCGGT......................................................................................................................1912.002110000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGCC..................................................................................................................2312.002000020
.............................................................................................GCCCGGATTCTGTGTGTGCTGCGT----.......................................................................................................................................................................2412.002001010
...........................................................................................................................................................ACCACATGATTCGGCTGT...................................................................................................................1812.002100100
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTCC.................................................................................................................2412.002200000
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................1812.002020000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................2212.002100010
........................................................................................................................................................AGCACCACATGATTCGGCTAA...................................................................................................................2112.002020000
......................................................................................................................................................GTAGCACCACATGATTCGGCTGT...................................................................................................................2312.002020000
........................................................................................................................................................AGCACCACATGATTCGGCTGTT..................................................................................................................2212.002020000
droAna3
CGA----GCATC---CTTTAA----GTGTCCTTGACAAATGTCATTCGC--------------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGC----CGTTC-----------TTTCTA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------C------ATCCTGTTGGCTG--ACAC---AAGAAATTC--------------GCCA---------------AAAG---------------TAASizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211113852.0011385216244916411185177014961516
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2019417.00941710166871268250138874
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2116196.006196861667465
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................2214527.00452762134434619441182
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2212851.00285110826653621417
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2011624.001624116220100
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................2111591.0015914314783701617
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................2311040.0010404898010002
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................201873.00873774981000
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211766.00766186496558138
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191722.0072215441016192121
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................221496.00496104706721
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................231271.0027164155131614
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................231249.00249112303311
.............................................................................................GCCCGGATTCTGTGGGAGCTGCG............................................................................................................................................................................231215.0021596422123132
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................221202.002023085425454
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................241188.00188161675000
.............................................................................................GCCCGGATTCTGTGGGAGCTGC.............................................................................................................................................................................221150.00150274198956
.............................................................................................GCCCGGATTCTGTGGGAGCTG..............................................................................................................................................................................211128.00128336537515
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................181120.001204123513137
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20198.00985827103
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22159.00593551000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................21158.00583541000
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................19154.005424290001
..............................................................................................CCCGGATTCTGTGGGAGCTGCG............................................................................................................................................................................22154.005424150348
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................24148.00483450000
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19145.00453960000
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22138.00383420002
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21137.00373430000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................23131.00315242000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22129.00295211200
..............................................................................................CCCGGATTCTGTGGGAGCTGC.............................................................................................................................................................................21126.00265603111
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23125.00253170401
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................22116.0016390013
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................23114.00140140000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................23112.00122100000
.............................................................................................GCCCGGATTCTGTGGGAGCT...............................................................................................................................................................................20112.0012290010
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................18111.00111010000
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................21111.00110110000
..............................................................................................CCCGGATTCTGTGGGAGCTG..............................................................................................................................................................................20110.0010700102
.......................................................................................................................................................TAGCACCACATGATTCGGAC.....................................................................................................................20110.00100100000
.............................................................................................GCCCGGATTCTGTGGGAGCTGCGT----.......................................................................................................................................................................2419.009500022
.............................................................................................GCCCGGATTCTGTGGGAGCTGT.............................................................................................................................................................................2219.009240111
.......................................................................................................................................................TAGCACCACATGATTCGGT......................................................................................................................1918.008210212
.............................................................................................GCCCGGATTCTGTGGGAGCTGCAA----.......................................................................................................................................................................2417.007250000
.............................................................................................GCCCGGATTCTGTGGGAGC................................................................................................................................................................................1917.007070000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.................................................................................................................2417.007060100
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................2016.006600000
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................2116.006420000
........................................................................................................................................................AGCACCACATGATTCGGCTC....................................................................................................................2016.006060000
........................................................................................................................................................AGCACCACATGATTCGGCTTAA..................................................................................................................2216.006330000
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................1816.006330000
.............................................................................................GCCCGGATTCTGTGGGAGCTGCA............................................................................................................................................................................2316.006060000
.........................................................................................................................................................GCACCACATGATTCGGCTTT...................................................................................................................2016.006310110
.......................................................................................................................................................TAGCACCACATGATTCGGA......................................................................................................................1916.006010023
.........................................................................................................................................................GCACCACATGATTCGGCT.....................................................................................................................1815.005230000
........................................................................................................................................................AGCACCACATGATTCGGCTTG...................................................................................................................2115.005310001
.............................................................................................GCCCGGATTCTGTGGGAGCTGCGA----.......................................................................................................................................................................2415.005050000
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................2015.005131000
droBip1
CAA----GCATC---CTTTAA----GTGTCCTTGACAAATGTCATTCGC--------------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGC----CGTTT----TTT--TCTGGCTA----ACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------C------ATCTTGTAATTTG--TCAA---AAGAAATTC--------------TC----------------------CA-----AACAA-CAATSizeHit CountTotal NormTotal
No Reads
droKik1
TC-------ATC---ATTGGC----GTGCCCTCGGCAAATGTTTTTCAC--------------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGC----TGTTC----CCC-TTTCCGCCA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAG--------C------ATCC-ACGGATCG--CCAC---CCGGAATTACCCGAAAAG------------------------------------TTCACAAAAASizeHit CountTotal NormTotal
No Reads
droFic1
T----------C---CTGGAC----GTGTCTTTGGCGAGTGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGC----TGTTT----ATA-C-TCCAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAG--------C------AT-----------------CGG----C---------TGTAGC-CATAAA---------------GCC--TA-----CCCAA-TATTSizeHit CountTotal NormTotal
No Reads
droEle1
TG-----GCATC---CTGGGC----GTGCCCTTGGCGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGC----TGCTT----CTA-CTATCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AC-----------------CGG----A---------TTG--CATAGTCAGAGTTACCA------ATGGTTATCTTTATTTA-TTCASizeHit CountTotal NormTotal
No Reads
droRho1
TAA--TATGTGT-ATACTG------GCGTCCTGGGCGAATGTCCTTCGC--------------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGC----TGCTT----CTT-TTCTCAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AT-----------------CGG----C---------TTC--CAAAGCCA---CCAT-------------TA-----CACAC-AATASizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------GTGTCCTTGGTGAATGTCAATCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTT----CTACCTCCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAG--------C------ATCGCGTG---CT--CCAA---CTACAGCCAACAGAAAAA------------------------------------GCTAT-AATASizeHit CountTotal NormTotal
No Reads
droTak1
T----------C---CTGGGC----GTGTCCTTGGCGAATGTCACCCAC--------------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGC----TGTTT----CTG-CCGCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------C------AT-----------------C-------------------------------------------------TA-----ATCTC-TACASizeHit CountTotal NormTotal
No Reads
droEug1
TCG--TAGCCTC---CTGGGT----GTGTCCTTGGCGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTT----GTG-ATTCTAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAG--------C------AT-----------------CAG----A---------TTT-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TA-----------------------TTATCCTTGACGAATGTCATCCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCGTAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCAA---------------ACGGGTA-----ATCAC-GATTSizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................2111759696.00175969600109929167263179773614142200955221167101695317696185899039163149175410898972730537245124743092205233032553873393615116372550104024714197518641052904705241141052227067000000000000000006312637851594170172256893722313356277632423310215941342331671568124312812812714591941187638524156128840961220151805252906161432510011931121549379916413231253259422396978202553296628232126980523059064680373837053863516535683043871225343747646275711344681675941427382017492153234620324191015696653864501208902128111813842150136923122383471255055833631691202012276147567781512751084132756209401101262164678020117439331210770363748152701584627564129683631611520612578842425564696865127509119927301762501002040247652698053138395492302593362746412090461348028112375286835343358338451050771127862163598459729051269381851183219585106536862482812090892771727310567115613130669130669635972078657131142259240681737163816492217205513759101915251007285218807586711427740680101725832805777662715052251440140658401190614834136861229140642312215981186232656514398160258645645612885714638213166972879151094311288216730
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................201226177.002261770000341012811211993286400141228122315316174831411457614411912652803442442962044138912981237722243624474982737121692792883000000000000000002742722541577152491201021182202147240162383551222021278944024398905921051316176011951031101200709825025341373214100020031615206617605083483484472492808618232662725236501103226167446047340110822008996425071128687130295107455337163214791355165299978307579340001682162214020009530140359180111855132184411731560457632266321621534376173164466351025342518721000184221129117101476406313517431325245638834725421426945777483447649545334415390224359414081746141610856492049154743235192163205276202003150421272141066322432603112532824161328172506383181151148419982846931624115761609469840221535650247013881347111343922112123172712791994172868559833071743337597117293086190938520
.............................................................................................GCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................23166035.006603500002122314101040000003111000180300000226412513302935383041939911605148113800110000000000000000005239282825461373302696010672325062413135520124472031924545120341339311051226901110020301223057000012103088202192871113925522237123345150142175892110015232150108495033310160091726311113495313802161987240202525000002630020140281192103394278291193666146929641198256163276041500000724641013408387209193894632698217582118642722810753475324131255174669792464213221258425267769137413441876411234534126449419339730273946310214932583375261746873151044195418202713086320726271118454148366961544989731958261477624247148414364025326215381343852971
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................22155179.0055179000011974315293101300334660251717300000007405145415810156128302754305483149118432603000000000000000000000160160132985134851428521120193352134017351700263673430735266660711611792646946870631505013217040369610000021070221402781231698487140106871559180230105001003332231901812007588443073532248134217648115102111618829557014425114111582073584150000075171007000342202119298784901112371793733382511119926262691744111001931103122648419312749616511342620124319581931143435220522415292141150550197285459409324179322208970340413543316485366266633431980736634050672485615212531061717633399032849916192499811034450802296261194232534833012246362432919144285392393317455663644911380
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................22136273.003627300001013144002011002002969470126000000017524578545771285840159711731011135854210000000000000000000000011981171972842531583313407509824500462903249988820117938489501150403271619140001410100191631781121128375148667544263111340000046107262110288601110713112016445007248613036211341276002071854000019527250010041201979116292012776216171191589023612204919300192141953210749261376199394251818181462320273577594446245503994622375881164735594327565449864332219313762034241947514923178543941082313719872914833835124863962351043858606391227968195121391070
.............................................................................................GCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................22124277.002427700000023210012000000780001310006101060438137961959438729224132531681072890032000000000000000000131248178124469876956615101281820001114010914524121923202132301933000000000000100000130110269244275264142841579415410918196132137100300009013106002000021060101003636132278360101171700000305101000043503328125026981513411516622860111165190212000010903615153147195132153149929828817757191317926118706675292111003418167133682481424360200925013462051115641711064241412631451671302813187634148508101513973779106580421246100921175337263538012210474433814335493046211534559
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................19120313.002031300000000000000541252300292321211518401195111222144028662877651412010433272751484760001151000000000000000007179574701152677002010141000000131424144621101533670001000042552531330000095441435410333332722275175596470030042114162792743012784301610311113931446443164121805533886234319720210144601000875022001025647178140334589401399810547235815811303931390000212123524224787981165881173269120546823556537840893971354226535103142188231841822025164493414230184906511321453146741671385405249693689844482478209856117931313624116275906671112391922526004591012720
.............................................................................................GCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2118140.008140000000121000010000002720008000000018821102283210111310312671211202990003400000000000000000068310362619126600200225100000038264235391030316010000000000100000000030761319255482649785244521233413000001208804310000420100013020110121121919200306160000019510022002016564783472371642803623167620010000733205121881111182663020731096128152204918282425134835192101713076778412249413121535141179825196401825016413623112032519217171116211372568101212172558514743550
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................2117732.00773200005112151060516000000722030350000000713330817019741134101310106360000000000000000000000201816122591429176912840511047921006143914192019701143034051010102010010000020020103852276234113981126105220000030843274604101155169401413701296492711004134000003462006000702262311311153122269728381310100078131343901604210306155531311412139831158981278522311665986039101846164674650031087230338901800412840682042067516910861110071595391220260
..............................................................................................CCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................2217631.00763100000009300212010000300204282240111021131412921133588510000000000000000000000013881101971712174223729322930106149016246051541037537227134041116031010001000110010110000181914831414183915812118300110220217025103051611232623521541623800423396000001100000320001001920112213031132086427734138644730114160000641126230242104633913131119022142335862320813418533161595122014745827136321382023272831410101431613111221914491111115342950261347448181508529178470133185981912681020815111702851150
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................2215642.00564200000000000000010100333200100000000053356012156110415141231000198106530000000000000000010201025098116010022202002200915211960035114074010000010550000500000281212663139100581260000071012226211031043020713009015038154710010140000041100000019992848612649910549171115110047210232010151312129211583333518154321108102031433231131819423835654396832520182131342422618021180511394795411650215134409419251825540191557263114131010711171221500
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................1813506.00350600000000000000002219006804125216430009147131415348111774381000122000000000000000006108804105666000000130000000210191141014031216300000001833014359000008141016581537880378602231171666213337023416951321241045564270624726590030211011031170001002216122350202346113711238132323000088103585203521215317311438710172111187622384644461716926478952412941132397118104982106217843938110112732917203563861451240040042753046990
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................2312799.0027990000208840000300000027000000000000126311493237311206665430000000000000000000000011200842446351016200010117310021200172318290311710250020000100100100000200005264823101241441109179400000100000030000020104010000000342214000341000000836002000101111730199201024151059400700003203042020021000001001010000011014272122815245301141272210100014930001244142369601010126671720000000133102021525050330
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2112786.002786000011201003060000001000017000000001222413810111464100000000000000000000000059421312104553024021100013407181165204200305100010102032000000010002213218121289100000412632617022123241214404536015024262000001000000440000002015712146661236202299247000054400874130020961820115810124831382123161242924147199441912516711273918743524507001059765713508921382132837311313101161819301621500942892119350
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................2011703.00170300001001000000000000010000123100000031104053003002592000063000000000000000000812990303735310300142000330067251514104013171010201000000000000120143321252611120000002901322323280187318418116111250502010020060020060000001004000712841126187042181123285004000032110212600203014203225522012786516462538721293756568312001122521904226190600818126237223181096400301230445320
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................1911443.00144300000000000000000000260000000000000000000310000000001000000000000000000000004223233413179271761162051574001571373965596141132100000000000000010000000000021002111200030000003811201044020001010200003010403015000000000002000100013132123310460030000000011010020600100010101112000021573017342517621663654124104100052001038040221411095052004304200100101010000
..............................................................................................CCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................2111245.00124500000000000101000000000001000000000210031042110203210200000000000000000000002003030014110002003341000000135170612113500000000000000101000000514109032365210515600000030010020000130200030003001311100000000000001100000010323031647515516130651000031113417401107053319415934255161340933228084210376441111131256001005516531193219221134268195118642916153212136262118121150
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................2111201.00120100001100431102010000010000000000003010162021010362020000000000000000000000005104401011103310010000000000846311002031010000001000100000000000022330121003111000005040025902000312014451640616040301000000000000130000001000362002102031104100000021063361312120110321421117871234133115416392824182450832715011121722202251614521833301262016210100212000200100310240
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................2311195.0011950000000010000200000022000040000000011020047232101110100000000000000000000000551203100045000000012000200122029172601301002100000003021000000000003406102210023100100805101033104000101021400011500115101000708600000410000001045244405781484177008000010210102511102142063202457524126158111081531266383365262795215203270114081781812001312101122421318841131041413026169650
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................2411158.001158000000100000000000001200000000000001431501371230235213000000000000000000000000000026626910000000030000000011100304008001000000000000000010000213117101231126023810000000000000000000000000000000031213000000300000720000000000532019221203036184300020000000101000000000000000010000000000121985641714674600000000060010918631023000000133683000000000000001803020000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................2411035.0010350000000000000000000000000000000000011100100303102001000000000000000000000000040201136896001003021000100196105020000000000000000000100000000000531211475102005000003000203000001203000100301000003000001100000000000000826590180861283712009000010001727110311145531027147553075145126312220212320101325052213151211504663011400110929220215375125112541020811204178713220
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................2011007.0010070000001000000000000012020040000000431105026400009421010000000000000000000000000007000210000000000000000212050001001000000000000100000000000175961222202923000006031400500000010001000007104641117000010000001200000050010310321821614211100001003000111200330010401020321014206111611163211591257671270030234012193171207005241038205112339340000133329164210
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................221901.0090100000000000000000000000102300000000112020340112142223000000000000000000000000110010010021000000000000000030010000120510000120104000100000001020111003020000000000100061603010200122730001205233100010000000025000000000690334474411071030000020001513242114102120254020531133741579127811103775451091011532000006273101901044416410425424400150002029115100
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................231708.007080000000020000000000000000000000000020000012100102212000010000000000000000000001008247202420010002200100100603301011111000000000000000000000000122102243230200300000000000100000010000100030000000100000040000000000000213110021687219172031430000110112312000010201021011132203110032062124103440530225950050463120501225252258111243111199115032016421080
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................231643.006430000001100000000000001110010000000010000073001005351100000000000000000000000010001212047600021000100000004342302120160020100000001000000000001711093141311433000001001001140000011100040000000291300000100000045000000030310104104542340001000000011003131001101061010120001313252072233623632623210172100014444231100032212242003023241001023200421110
.............................................................................................GCCCGAATTATGTGGGAGCT...............................................................................................................................................................................201622.0062200000000000000000000000000100000003130110103100100022000000000000000000000000011040300103200000100000000087339131000000000000000000000000000002550011302000200100020000023000000000000003010212000000006000000100000000065340047220120000000002000012000000000001000010016140122352140110614101000001001011110301116034000100110000200010032110
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................231540.00540000000012000000000001211000000000010002100300102311300000000000000000000000011000500411100000112100000001300110100000101000000010000000000002514011211000410000010000006000010010100000010365220004020000002200000003021710478513352000420001001101000100400002002010101000005294274815462141100112000027333200110014221120000004001020310020150
.......................................................................................................................................................TAGCACCACATGATTCGGT......................................................................................................................191464.0046400000000000000001000100002000000000200032160110514420000000000000000000000000000001000000000000000001000001000000000100000000003000000000002211341100030312000000000003901210110038000260120120010010200000000001200101427222711420226320000212103011042041621025143310724145103011300293092333311020000016102410303010002001021211155111525880
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................201455.00455000000000000010000000000001000000030000000000000100000000000000000000000000000000000000300000000000000001120000000000000000000010000100000000200100010001000000220011110000001007742000530302016000000000000000000020100010000000011004000000000301100301000001120000020011329172115205481712131375110101000112142030036001000010070201000000000230
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................181410.00410000000000000000000001200000000000001100100100000100100000000000000000000000047580000000000000000000000001000000000000000000000000000000000203000014241107000000103010110002000012000000124500000200000050000011000000531430000000000700100000410000000000000000002110000022230020862911051409301100106100102013020114034071001301100000301200110
.............................................................................................GCCCGAATTATGTGGGAGCTGCA............................................................................................................................................................................231392.003920000000110000000000000000000000000010301001112011151000000000000000000000000000009801211000000000000000333100001001500000000000000000000000031274022211010100000000000000000000000000000000000000000000000000000000020031114050512400020000000001000000001200000002000211001181741821429111100200270015158414012002413014150020212060101401015130
.......................................................................................................................................................TAGCACCACATGATTCGGCTTATC.................................................................................................................241371.00371000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027890000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................201365.0036500000000000000000000000010100000003000110030000000000000000000000000000000003001000000000000000000000000102010000100000000000000000100000000010000110001000000000000100000000000021102011101011001000000000000000012035100000000140010000030010000001000100011101000311130244353276431422117100030100056630800670461121101334210000122134140
.............................................................................................GCCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................241327.0032700000000000000000000000000100000000000000100010000000000000000000000000000000000034216020000002000000100601102000102400000000000000000000000004480023200100000000000000010000000001000000000000200000000000000000000030010072337254500210000100020000000102001010010000111231117655521032201000110000101411809000301015251714922000100101313020
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................191255.00255000000000000000000000000061100000000000010000000010000000000000000000000000000200010000010000000000000400143000000000000000000000000000000000000002010000020000000000022000021020143000020440001300000000000000000000000210022020020000000001110000000400111001000001000401048414236192110000000000000004100000002024211000100000000000002000
.............................................................................................GCCCGAATTATGTGGGAGCTGCT............................................................................................................................................................................231243.002430000000000000000000000000000000000000010010100100121000000000000000000000000000004470211001000000000000703100000000000000000000000000000000022000121200110000003001000000000000000000000000000000000000000100000000210010200101001000000001000341400102002301213110001324212052904160252200001401122001050140012060110001440000100010111120
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................221228.00228000000020000000000001000000000000000120101100000002200000000000000000000000002000507051000000100000000005400000100000000000000000000000000001600100000000000000000000000000010000000000000020200000000000002000000000001001212200000000000200000000000000000000000010001000122322443212000000000310002210160000011314000000000000001101000000
.............................................................................................GCCCGAATTATGTGGGAGCTGT.............................................................................................................................................................................221210.0021000000000000000000000000000000000001000010000000010210000000000000000000000000100000201210000000100000004311030000000000000000000000000000000121001102000100000002000001001000000000000000000010000001000000100000001021231544436230003000001000104100005010003100011060302000731268010500000011000200125110014065110130000000000000113020
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................231209.0020900000000000000000000100000100000000010010110000120100000000000000000000000000010000001100000000000000000000000000010000000000001000000000000000101011000000000000000000000000000000000010000000000000000002000000003030000012020120000000000010000000001000010000100100000011953722521810000000060000237160300124311002100001000000000001130
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................221204.0020400000000100000000000010001000000000001000000001100110000100000000000000000000001000300010000000000000000010000000000000000000000000000000000010001000000000000100000011000001000020000000010010001000000000000000000011010000000030000000010000120000001000000012000207031031121312061522010000017310200718000023043110211501100010010121140
.............................................................................................GCCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................241196.00196000000000000000000001010000000000001000000000000010000001000000000000000000000000000200000000000000000000400000000000000000000000000000000003200100010030000000008000000000000000010000000000000000000000000000000300120021100001210100000000010000000200000000000000021001050401020020200101300021022405000342940213001724100112101001210
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................231168.001680000000000000000000000000010000000001000112000001110000000000000000000000000100000003000000000000000000000000000000000000000000000000000000002000100000010000000000000000000000000000000000100000000000000000000000001400003000100001000000000000000110000401100000212120121172194300102100300002000101416130000002010101201000000000100130
.......................................................................................................................................................TAGCACCACATGATTCGGA......................................................................................................................191153.001530000000000000000000020000150000000100000024011004550000000000000000000000000020000010000000000000000000000000000000011010000000000000000000021010100000201000000000000100000020002000000000000000000000000010000000023110150011000010000000000210000100150000100010112103010202031103408100020001002100301190000000001000000301000111030
.............................................................................................GCCCGAATTATGTGGGAGCTGCC............................................................................................................................................................................231152.00152000000000000000000000000000000000000000013100100000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000011100100110010000000180000000000000000000000000000000000000000000000000010000010000000000000000000012100010000020321100000001130312371612012110000111012020220310003020000100133000000000010000
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................231145.001450000000110000000000000000000000000000000001000000201000000000000000000000000110200040001000000100000100300100000100000000000000000000000000011000010102006000000300100140000000100201000000000000000010000000000000101200010005222022000001000000100000201020001010101010100000000000320100001000000022000001011230103414100900100611310
.......................................................................................................................................................TAGCACCACATGATTCGGCTCT...................................................................................................................221130.0013000000000000000000000000000100000001000000000000000100000000000000000000000000000000000001000000100000001000000000000000000000001000000000000000000000000000000001000021000000000000000010110000000000000000000000010101100000000010040000001001001001001100042101110300000036112222031001300002000005431030001110100100000200000000201330
.............................................................................................GCCCGAATTATGTGGGAGC................................................................................................................................................................................191127.001270000000000000000000000000000000000120001100010000111000000000000000000000000040100000201010000011000000071891000101000000000000000102100000021000121022000000000000000000000000000000000100010000000000000000000000000562800541000000100000000000000000000010100100014110221000000000301000000000100000000010000000000000000000000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................211127.001270000000200110000000011000000000000000110041000011100000000000000000000000000000011400500000100010000000000000002001000000000000000000000000011271000200130000000000000100000000000000000001603000000000000120000000010000020102010000000000000000000000000000000001000001000702415020000000005100101100010010057000000000000000000100000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................231123.0012300000000000000000000000000000000000000100100000000010000442390000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000100000000000000010000000100000001000000230602020010200000000100201000001000003012100300100100001100
.............................................................................................GCCCGAATTATGTGGGAGCTGCAA----.......................................................................................................................................................................241118.00118000000010000000000000000000000000000010100010000000000000000000000000000000000000410030000000001000000000000000000000000000000000000000000001410330000000300000000000000000000000000000000000010000000000000000000000010000010412100000000000000000000000000000000000000000021221836060000000001000011502000000044000000000000002100000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................231116.001160000000000000000000000000000000000000000000000100012000000000000000000000000000100003121000001000000000233000000000000000000000000000000000013000000010300000000000000100000000000010001000030000000000000000000000002311102231400001100000000110000000000000000001020000100217015232000100011000003113000010001000100000000000010011130
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................241116.0011600000020000000000000010000000000000010000422000010000000000000000000000000001001040115000000000300000003010000020000000000000000000000000000100300001000000000000000000000000000000000000000100000010000000000000000001001010200100000000100001000000000000000000000000000103010205100000000200001344700000013104000000001000000000020020
.............................................................................................GCCCGAATTATGTGGGAGCTGCGC----C......................................................................................................................................................................251112.0011200000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000020000000000000000010000000000000000000000000000000000000000000020003002002000000000000000000000000000000000000000000000000100000000000400010121601700004243000010800000002200000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................231105.0010500000000000000000000010000000000000000100010110000100000000000000000000000000100000012100000000000000003211000110010000000000000000010000000010000000010000000000000000000000000001000000012000000000000000000000000002000010010000011030011000000000000010000000000000100001925212130010000000001003510000000142000000000000000100000010
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................232103.0020600000000000001000000110000000000001001100000000000001000000000000000000000000000000303000000000000000000000100000000000000000000000000000000130310100000000000000000000000000000000000000002100000000000000400000000000000020100220000000000000000000000000001000000000001051333166101600000000000000325310000001014000000000000001200000000
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................21196.0096000000000000000000000000010000000000000000100000010000000000000000000000000000000100000000000000000000000200000000000000000000000000000000002050000000000000000000000000000001000000000100020200000000000000000000100100000000000200000000001010000000100000100010000140000021023020022010002000100502020021055201211310030101000011140
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................22187.0087000000000000000000000100000000000000000010001100001100000000000000000000000000000100001100000000000000000000000000000100000000000000000000000100000000000100000000000020000010000000000000301000030000000000000000000060010001000000000000000000000000010000100011000000000191819060010000000000000202000021102000000000000101001110110
droSim2
CAA----GCAT------AG-------------GAAGAAATGTCGTTCAC--------------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCCA---------------GCC--AG-----TCCAC-GATTSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211314505.00314505114761552183293454365471670017153248162349917784137221362719103848
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................20126806.00268065200311284119237184177412053022669157223024112010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2218648.0086488634711067700873753251218213051798176000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................2216254.00625424681725471320025628033737123120801359001
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................2114637.0046373773956763400772235510000
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................2113427.0034275543873234002593177515891038537000
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................1912416.0024163222015381382193112943552543291003000
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2112226.0022261286477924001114121344201000
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2011117.0011177683231310000111000000
...........................................................................................................................................................ACCACATGATTCGGCTT....................................................................................................................171930.00930000000621421887000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................231883.0088330138928004825155143383158000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................241444.0044420912600342513010524322000
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................181417.0041700035210852304425101101000
.............................................................................................GCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................221394.0039430200200003374901000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................221385.0038599548141019366149371312000
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................201307.00307901621910459527012009
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................201306.003061641512310000003000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................231281.0028159985006476401172000
.............................................................................................GCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................211263.002638122010000248001000
.............................................................................................GCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................231218.002180007001301015523162100
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................231182.00182006300383263382000000
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................191178.001784182002874141010000
..............................................................................................CCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................221154.00154200900380130974729000
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................181151.0015139652100121247000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................231133.0013344720200459850524000
.......................................................................................................................................................TAGCACCACATGATTCG........................................................................................................................171125.001250000000100124000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................221118.00118855920033215102000
............................................................................................................................................................CCACATGATTCGGCTT....................................................................................................................161114.00114000000111121179000000
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................201102.00102414100131644134110000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23198.0098703400108231230226000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22173.007320192005415165113000
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................23160.0060000000101200253100
...........................................................................................................................................................ACCACATGATTCGGCTTT...................................................................................................................18157.00572648000000019000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................23155.005511090131710120010000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22150.0050422200000003001000
.......................................................................................................................................................TAGCACCACATGATT..........................................................................................................................15149.0049000000010147000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................23147.00470000008617132100000
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22145.00451011440031713010000
...........................................................................................................................................................ACCACATGATTCGGCT.....................................................................................................................16143.0043000000003040000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................22138.0038350200000000100000
...........................................................................................................................................................ACCACATGATTCGGCTTA...................................................................................................................18137.00376017000001013000000
.......................................................................................................................................................TAGCACCACATGATTCGGCGG....................................................................................................................21134.0034291400000000000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................24132.0032000200110928000000
.............................................................................................................................................................CACATGATTCGGCTT....................................................................................................................15132.0032000000315320000000
.......................................................................................................................................................TAGCACCACATGATTC.........................................................................................................................16131.0031000000000031000000
.............................................................................................GCCCGAATTATGTGGGAGCT...............................................................................................................................................................................20128.0028000010105120000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................22126.0026100000305600011000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................23125.0025121620010110010000
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19121.0021100110001403001000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................22121.0021170000000003001000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................24120.002000820010201042000
.............................................................................................GCCCGAATTATGTGGGAGC................................................................................................................................................................................19119.0019000054000010000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................23119.001921800000132002000
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----A......................................................................................................................................................................24118.0018000000000000018000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................21113.001300220001131003000
.................................................................................................GAATTATGTGGGAGCTGC.............................................................................................................................................................................18112.0012000000000012000000
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................23112.001200000050202012000
.......................................................................................................................................................TAGCACCACATGATTCGGCCG....................................................................................................................21111.001170300000001000000
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................21111.001180300000000000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCA............................................................................................................................................................................2319.00900010000103022000
.............................................................................................GCCCGAATTATGTGGGA..................................................................................................................................................................................1719.00900000000009000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----T......................................................................................................................................................................2519.00900000000001008000
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................2119.00920100011012100000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGA..................................................................................................................2319.00990000000000000000
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----T......................................................................................................................................................................2418.00800000000000008000
.......................................................................................................................................................TAGCACCACATGATTCGGAC.....................................................................................................................2018.00840300000001000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----A......................................................................................................................................................................2517.00700000000001006000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................2317.00720100000111001000
..............................................................................................CCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................2317.00700000000200014000
...........................................................................................................................................................ACCACATGATTCGGC......................................................................................................................1516.00600000000015000000
............................................................................................................................................................CCACATGATTCGGCTTA...................................................................................................................1716.00600000001212000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTCA...................................................................................................................2216.00600100030110000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTA..................................................................................................................2316.00660000000000000000
.......................................................................................................................................................TAGCACCACATGATTCGGA......................................................................................................................1916.00620000011100010000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................2316.00660000000000000000
.........................................................................................................................................................GCACCACATGATTCGGCTTA...................................................................................................................2016.00600000000006000000
..............................................................................................CCCGAATTATGTGGGAGCTTTT............................................................................................................................................................................2216.00600000000000006000
.........................................................................................................................................................GCACCACATGATTCGGCTTT...................................................................................................................2015.00500000000005000000
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................2115.00500030000001001000
..............................................................................................CCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2015.00510120100000000000
..............................................................................................CCCGAATTATGTGGGAGCTGTT............................................................................................................................................................................2215.00500000000000005000
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................2115.00500020010101000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................2415.00500000000003002000
.................................................................................................GAATTATGTGGGAGCTG..............................................................................................................................................................................1715.00500000000005000000
..............................................................................................CCCGAATTATGTGGGAGC................................................................................................................................................................................1815.00510001100002000000
..............................................................................................CCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................2115.00500000010001300000
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................1815.00520010200000000000
............................................................................................................................................................CCACATGATTCGGCT.....................................................................................................................1515.00500000001022000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTATA.................................................................................................................2414.00410000000120000000
.............................................................................................GCCCGAATTATGTGGGAG.................................................................................................................................................................................1814.00400002000002000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.................................................................................................................2414.00401000000000003000
.......................................................................................................................................................TAGCACCACATGATTCGGCGA....................................................................................................................2114.00410000000003000000
........................................................................................................................................................AGCACCACATGATTCGGCTTCG..................................................................................................................2214.00400400000000000000
............................................................................................................................................................CCACATGATTCGGCTA....................................................................................................................1614.00400000001102000000
...........................................................................................................................................................ACCACATGATTCGGCTC....................................................................................................................1714.00400000000004000000
.............................................................................................GCCCGAATTATGTGGGAGCTGT.............................................................................................................................................................................2214.00400000000003100000
.................................................................................................GAATTATGTGGGAGCTGCG............................................................................................................................................................................1914.00400000000004000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCAA----A......................................................................................................................................................................2513.00300010000002000000
.......................................................................................................................................................TAGCACCACATGATTCGGG......................................................................................................................1913.00310200000000000000
......................................................................................................................................................GTAGCACCACATGATTCGGCTTT...................................................................................................................2313.00310100000000001000
.............................................................................................GCCCGAATTATGTGGGAGCTGCAA----.......................................................................................................................................................................2413.00300030000000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGTT..................................................................................................................2313.00330000000000000000
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................2013.00300120000000000000
droSec2
A------------------------------------AATGTCGTTCAC--------------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CCGAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------C------AT-----------------CGG----T---------TTTTGC-TAGCCA---------------GCGGGTA-----TCCAC-GATTSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................21127694.002769415599117372963626
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2011789.001789610115531533
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................221840.0084042766170177
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................201715.00715708061
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................221287.0028715997346
.............................................................................................GCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................221177.001771057884
.............................................................................................GCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................231166.0016643119319
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211113.00113106322
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211107.001075752223
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................19183.00833221831
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................23169.0069400281
..............................................................................................CCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................22153.0053153305
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................21150.0050152258
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................22139.0039185106
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................23137.0037177211
.............................................................................................GCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................21127.002781711
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................22127.002720007
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19125.002525000
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21123.002322010
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18122.00228077
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................24121.002114061
..............................................................................................CCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................21121.00213576
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................23115.00151167
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22115.001514001
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................23115.001510113
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................19114.00149050
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................21113.001313000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23113.00136034
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20111.00113152
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................23110.00104321
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................24110.00102224
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................2318.0082051
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................2218.0085030
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----C......................................................................................................................................................................2418.0080053
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................2315.0053110
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................1815.0053011
.............................................................................................GCCCGAATTATGTGGGAGCTGCA............................................................................................................................................................................2315.0050041
.......................................................................................................................................................TAGCACCACATGATTCGGT......................................................................................................................1914.0042002
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................2314.0041030
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................2314.0041120
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................2414.0043001
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................2214.0044000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.................................................................................................................2413.0031200
...........................................................................................CAGCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................2413.0030021
.......................................................................................................................................................TAGCACCACATGATTCGGA......................................................................................................................1913.0032100
.............................................................................................GCCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................2413.0030210
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................2313.0033000
......................................................................................................................................................GTAGCACCACATGATTCG........................................................................................................................1812.0020020
..............................................................................................CCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................2312.0021001
........................................................................................................................................................AGCACCACATGATTCGGCTTG...................................................................................................................2112.0022000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................2112.0020020
........................................................................................................................................................AGCACCACATGATTCGGCTTAA..................................................................................................................2212.0022000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................2312.0021001
.............................................................................................GCCCGAATTATGTGGGAGCTGCAA----.......................................................................................................................................................................2412.0021010
......................................................................................................................................................GTAGCACCACATGATTCGGCTTT...................................................................................................................2312.0022000
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................2012.0022000
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----CG.....................................................................................................................................................................2512.0021010
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2012.0021001
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2212.0021100
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................2112.0021010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTATA.................................................................................................................2411.0010010
..............................................................................................CCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2011.0011000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................2211.0011000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----T......................................................................................................................................................................2511.0010010
..............................................................................................CCCGAATTATGTGGGAGCTGCGT----TT.....................................................................................................................................................................2511.0010001
.......................................................................................................................................................TAGCACCACATGATTCGGAA.....................................................................................................................2011.0010100
...........................................................................................CAGCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................2511.0010010
...................................................................................................................................................TCCGTAGCACCACATGATTCGGCTT....................................................................................................................2511.0011000
.......................................................................................................................................................TAGCACCACATGATTCGGCTATT..................................................................................................................2311.0010001
..............................................................................................CCCGAATTATGTGGGAGCTGCGG----.......................................................................................................................................................................2311.0010001
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................2311.0010001
.............................................................................................GCCCGAATTATGTGGGAGCT...............................................................................................................................................................................2011.0011000
.............................................................................................................................................AG----TCCGTAGCACCACATGATTCG........................................................................................................................2311.0010010
.......................................................................................................................................................TAGCACCACATGATTCGTT......................................................................................................................1911.0010001
.......................................................................................................................................................TAGCACCACATGATTCGGAGA....................................................................................................................2111.0010100
........................................................................................................................................................AGCACCACATGATTCGGCTC....................................................................................................................2011.0011000
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................2011.0011000
...........................................................................................................................................GAAG----TCCGTAGCACCACATGATT..........................................................................................................................2311.0011000
........................................................................................................................................................AGCACCACATGATTCGGCTTCT..................................................................................................................2211.0011000
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................2111.0010010
.............................................................................................GCCCGAATTATGTGGGAGCTGTT............................................................................................................................................................................2311.0011000
...........................................................................................CAGCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2311.0010010
droYak3
TT-------ATC---CTGGACGTTGCCATCCTGGATTAAACTCATTCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT-----------CTAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------C------AG-----------------CAA----T---------TTTTGG-TAGCCA---------------ATCG---------------TTASizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................211150883.001508832180516107107850166810971559521361819131
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................2117681.0076812837737554700000
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2015921.005921696585420316491115601060
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................2213830.0038305547152376364583142050
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................2211207.001207981818931441070000
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................2011099.001099120197701000000
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................2011006.00100639039710001010
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211555.00555235131611578800000
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211488.004886064345123400000
.............................................................................................GCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................231475.004750393744421240000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................221444.004443233362321020000
.............................................................................................GCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................221265.00265020193338920000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................231243.0024315318340110000
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191190.00190452210971311010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................231108.0010817236102110120
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................22181.008123232810510000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................24176.00761254910000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................23165.006513143600110000
.............................................................................................GCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................21163.00631124313210000
..............................................................................................CCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................22158.00580242440400020
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21151.0051146400000000
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................19148.00480351102000000
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22147.00471271900000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23142.00422241410010000
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19138.0038034400000000
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................23135.0035032730010010
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22123.0023171500000000
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................18123.00231121000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................21121.0021401700000000
..............................................................................................CCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................21120.0020021220130000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22120.0020303041000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................24118.001819800000000
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................21115.0015013200000000
......................................................................................................................................................GTAGCACCACATGATTCGGCT.....................................................................................................................21114.0014101020100000
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................20114.0014021200000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGG...................................................................................................................22113.001380002300000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................23112.0012021000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCG.....................................................................................................................20211.0022201100000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................23110.001003700000000
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18110.001005121010000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................2319.00913500000000
.......................................................................................................................................................TAGCACCACATGATTCGGAC.....................................................................................................................2018.00810700000000
.......................................................................................................................................................TAGCACCACATGATTC.........................................................................................................................1618.00800000001070
.............................................................................................GCCCGAATTATGTGGGAGC................................................................................................................................................................................1918.00800800000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCT............................................................................................................................................................................2318.00800600020000
........................................................................................................................................................AGCACCACATGATTCGGCTC....................................................................................................................2017.00700700000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................2416.00602200200000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................2116.00612201000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................2316.00631000200000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................2316.00602300100000
.......................................................................................................................................................TAGCACCACATGATTCGGCAC....................................................................................................................2115.00501400000000
..............................................................................................CCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2015.00502300000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCC............................................................................................................................................................................2315.00500500000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCA............................................................................................................................................................................2315.00500410000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGA----.......................................................................................................................................................................2414.00401120000000
........................................................................................................................................................AGCACCACATGATTCGGCTTAA..................................................................................................................2214.00404000000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2214.00421000100000
droEre2
CATGTTATTATC---TTGGAC----GCGTTCCTGACGAATGTCATTCAC--------------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----TGTTT-----------TCAGGA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------C------AG-----------------CGG----T---------TTTTGC-TAGACA---------------ACGG---------------TTASizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
.......................................................................................................................................................TAGCACCACATGATTCGGCTT....................................................................................................................21144981.004498128559831610005261996455628
.......................................................................................................................................................TAGCACCACATGATTCGGCT.....................................................................................................................2012879.002879132533891572837850
.......................................................................................................................................................TAGCACCACATGATTCGGCTTT...................................................................................................................2211529.0015291128954912791660
........................................................................................................................................................AGCACCACATGATTCGGCTT....................................................................................................................2011301.00130112781210190
.......................................................................................................................................................TAGCACCACATGATTCGGCTTA...................................................................................................................221580.005804404710234470
.......................................................................................................................................................TAGCACCACATGATTCGGCTG....................................................................................................................211538.005382221745132140
.......................................................................................................................................................TAGCACCACATGATTCGGCTC....................................................................................................................211481.004811245942220
.............................................................................................GCCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................231177.001774721121220650
.............................................................................................GCCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................221176.001761415910211070
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAA..................................................................................................................231170.001701531101230
.......................................................................................................................................................TAGCACCACATGATTCGGCTA....................................................................................................................211150.0015011619203100
.......................................................................................................................................................TAGCACCACATGATTCGGCTTC...................................................................................................................221122.001227019768120
.......................................................................................................................................................TAGCACCACATGATTCGGC......................................................................................................................191121.001215711406430
.......................................................................................................................................................TAGCACCACATGATTCGGCTTG...................................................................................................................221112.00112723402310
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.................................................................................................................241108.00108103400010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTT..................................................................................................................23176.007660331450
........................................................................................................................................................AGCACCACATGATTCGGCT.....................................................................................................................19166.006664100010
.............................................................................................GCCCGAATTATGTGGGAGCTG..............................................................................................................................................................................21164.006443211890
.......................................................................................................................................................TAGCACCACATGATTCGGCC.....................................................................................................................20159.005905700110
........................................................................................................................................................AGCACCACATGATTCGGCTTT...................................................................................................................21158.005857010000
.........................................................................................................................................................GCACCACATGATTCGGCTT....................................................................................................................19156.005648401210
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAT..................................................................................................................23147.004743010120
..............................................................................................CCCGAATTATGTGGGAGCTGCG............................................................................................................................................................................22140.0040151318120
.......................................................................................................................................................TAGCACCACATGATTCGG.......................................................................................................................18138.003870202270
......................................................................................................................................................GTAGCACCACATGATTCGGCTT....................................................................................................................22132.003232000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGT----.......................................................................................................................................................................24126.00266010739
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTA..................................................................................................................23123.002316300310
........................................................................................................................................................AGCACCACATGATTCGGCTTA...................................................................................................................21116.001616000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGT...................................................................................................................22112.001210110000
..............................................................................................CCCGAATTATGTGGGAGCTGC.............................................................................................................................................................................21112.00121101360
.......................................................................................................................................................TAGCACCACATGATTCGGCTAA...................................................................................................................22110.001010000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.................................................................................................................2419.0099000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGT..................................................................................................................2319.0098000100
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCT..................................................................................................................2319.0096001110
..........................................................................................................................................................CACCACATGATTCGGCTT....................................................................................................................1817.0076000010
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCA..................................................................................................................2317.0074000120
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTC..................................................................................................................2316.0066000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAT...................................................................................................................2216.0066000000
........................................................................................................................................................AGCACCACATGATTCGGCTTAAA.................................................................................................................2316.0066000000
..............................................................................................CCCGAATTATGTGGGAGCTG..............................................................................................................................................................................2015.0055000000
.......................................................................................................................................................TAGCACCACATGATTCGGCGG....................................................................................................................2115.0055000000
.............................................................................................GCCCGAATTATGTGGGAGCTGA.............................................................................................................................................................................2214.0041100020
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCG..................................................................................................................2314.0040100030
.......................................................................................................................................................TAGCACCACATGATTCGGCTTAC..................................................................................................................2314.0044000000
..............................................................................................CCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................2314.0041300000
........................................................................................................................................................AGCACCACATGATTCGGCTTAA..................................................................................................................2214.0044000000
........................................................................................................................................................AGCACCACATGATTCGGCTA....................................................................................................................2014.0044000000
.......................................................................................................................................................TAGCACCACATGATTCGGCA.....................................................................................................................2013.0031001100
.......................................................................................................................................................TAGCACCACATGATTCGGCTTCAA.................................................................................................................2413.0033000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTAAA..................................................................................................................2313.0033000000
.......................................................................................................................................................TAGCACCACATGATTCGGCAA....................................................................................................................2113.0033000000
........................................................................................................................................................AGCACCACATGATTCGGCTTTT..................................................................................................................2213.0033000000
.......................................................................................................................................................TAGCACCACATGATTCGGCTTTAG.................................................................................................................2413.0032000100
........................................................................................................................................................AGCACCACATGATTCGGCTG....................................................................................................................2013.0033000000
........................................................................................................................................................AGCACCACATGATTCGGCTTC...................................................................................................................2112.0022000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCT............................................................................................................................................................................2312.0020100100
.......................................................................................................................................................TAGCACCACATGATTCGGCTTGA..................................................................................................................2312.0022000000
.......................................................................................................................................................TAGCACCACATGATTCGGCCC....................................................................................................................2112.0020101000
.......................................................................................................................................................TAGCACCACATGATTCGGCTGA...................................................................................................................2212.0022000000
.............................................................................................GCCCGAATTATGTGGGAGCTGCGC----.......................................................................................................................................................................2412.0022000000
...............................................................................................CCGAATTATGTGGGAGCTGCG............................................................................................................................................................................2112.0022000000
.......................................................................................................................................................TAGCACCACATGATTCGCT......................................................................................................................1912.0020000020
........................................................................................................................................................AGCACCACATGATTCGGCA.....................................................................................................................1912.0022000000
....................................................................................................................................................................TTCGGCTTCGTGGTGCAGGAC.......................................................................................................2112.0020000200
........................................................................................................................................................AGCACCACATGATTCGGC......................................................................................................................1812.0022000000
......................................................................................................................................................GTAGCACCACATGATTCGGCTTT...................................................................................................................2312.0022000000
.......................................................................................................................................................TAGCACCACATGATTCTT.......................................................................................................................1851.4075000020

Generated: 10/20/2015 at 06:46 PM