dgr_67

Name	Class	Family	Strand
OSVALDO_I-int	LTR	Gypsy	-

TCCAAGCTCGTTATGAATTTTGCCTCTCTCAGCTGGTCCAGAATGTGGTGGACTCTCGGCAACGGATATGCATCTTTTATAGATTTGCTGTTTAGTTGCCGAAAGTCCACACAGAGACGCCATTTTCCCGTTTTCTTTTTCACCTTCACGATTGGTGCGC *********************************(((.....((((.((((((.(((((((((((((.((((((.....)))..)))))))).)))))))).))))))))))..))).......*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
...............................................CACGACTCTCGGCAACGGATA............................................................................................	21	3	4	73.75	295	294	1
.................................................CGACTCTCGGCAACGGATA............................................................................................	19	1	3	37.67	113	113	0
................................................ACGACTCTCGGCAACGGATA............................................................................................	20	2	3	33.67	101	101	0
..................................................GACTCTCGGCAACGGATA............................................................................................	18	0	3	33.33	100	100	0
...............................................CACGACTCTCGGCAACGGA..............................................................................................	19	3	14	27.64	387	387	0
...............................................CACGACTCTCGGCAACGGATAT...........................................................................................	22	3	4	27.25	109	109	0
................................................ACGACTCTCGGCAACGGA..............................................................................................	18	2	7	18.71	131	131	0
................................................ACGACTCTCGGCAACGGATAT...........................................................................................	21	2	3	11.00	33	33	0
..................................................GACTCTCGGCAACGGATAT...........................................................................................	19	0	3	8.67	26	26	0
.................................................CGACTCTCGGCAACGGATAT...........................................................................................	20	1	3	8.33	25	24	1
.................................................CGACTCTCGGCAACGGATATCT.........................................................................................	22	3	6	7.33	44	44	0
..................................................GACTCTCGGCAACGGATATCT.........................................................................................	21	2	6	5.00	30	30	0
...............................................CACGACTCTCGGCAACGGAT.............................................................................................	20	3	7	4.71	33	32	1
................................................ACGACTCTCGGCAACGGAT.............................................................................................	19	2	3	3.33	10	10	0
..................................................GACTCTCGGCAACGGATATC..........................................................................................	20	1	5	3.00	15	15	0
....................................................CTCTCGGCAACGGATATCT.........................................................................................	19	2	7	2.86	20	20	0
...................................................ACTCTCGGCAACGGATATCT.........................................................................................	20	2	6	2.83	17	17	0
.................................................CGACTCTCGGCAACGGAT.............................................................................................	18	1	3	2.33	7	7	0
...................................................ACTCTCGGCAACGGATAT...........................................................................................	18	0	3	2.33	7	7	0
.................................................CGACTCTCGGCAACGGATATC..........................................................................................	21	2	5	1.20	6	6	0
................................................ACGACTCTCGGCAACGGATATC..........................................................................................	22	3	5	1.00	5	5	0
...................................................ACTCTCGGCAACGGATATC..........................................................................................	19	1	5	1.00	5	5	0
...................................................ACTCTCGGCAACGGATATCTC........................................................................................	21	3	7	0.71	5	5	0
..................................................GACTCTCGGCAACGGATATCTC........................................................................................	22	3	7	0.71	5	5	0
...............................................CATGACTCTCGGCAACGGATA............................................................................................	21	3	5	0.60	3	3	0
....................................................CTCTCGGCAACGGATATCTC........................................................................................	20	3	9	0.44	4	4	0
....................................................CTCTCGGCAACGGATATC..........................................................................................	18	1	5	0.40	2	2	0
.................................................CCACTCTCGGCAACGGATA............................................................................................	19	2	3	0.33	1	1	0
................................................TCGACTCTCGGCAACGGATA............................................................................................	20	1	3	0.33	1	1	0
.................................................CGACTCTCGGCAACGTATAT...........................................................................................	20	2	3	0.33	1	1	0
.................................................CTACTCTCGGCAACGGATAT...........................................................................................	20	2	3	0.33	1	1	0
.................................................CGACTCTCGGCAACGGATATT..........................................................................................	21	2	3	0.33	1	1	0
...............................................AACGACTCTCGGCAACGGATAT...........................................................................................	22	3	3	0.33	1	1	0
.................................................CGACTCTCGGCAACGGATAA...........................................................................................	20	2	3	0.33	1	1	0
..................................................GACTCTCGGCAACGGATAC...........................................................................................	19	1	3	0.33	1	1	0
...............................................CCCGACTCTCGGCAACGGATAT...........................................................................................	22	3	3	0.33	1	1	0
...............................................CATGACTCTCGGCAACGGA..............................................................................................	19	3	11	0.27	3	3	0
...............................................CATGACTCTCGGCAACGGATAT...........................................................................................	22	3	4	0.25	1	1	0
.............................................TGGACGACTCTCGGCAACG................................................................................................	19	2	4	0.25	1	0	1
...............................................GACGACTCTCGGCAACGG...............................................................................................	18	2	4	0.25	1	1	0
.................................................CGACTCTCGGCAATGGATA............................................................................................	19	2	4	0.25	1	1	0
.....................................................TCTCGGCAACGGATATCT.........................................................................................	18	2	11	0.18	2	2	0
..................................................TACTCTCGGCAACGGATATCGA........................................................................................	22	3	6	0.17	1	1	0
..................................................AACTCTCGGCAACGGATATC..........................................................................................	20	2	6	0.17	1	1	0
..................................................GATTCTCGGCAACGGATA............................................................................................	18	1	6	0.17	1	1	0
..................................................GCCTCTCGGCAACGGATATCT.........................................................................................	21	3	7	0.14	1	1	0
................................................ATGACTCTCGGCAACGGA..............................................................................................	18	2	7	0.14	1	1	0
................................................ACGACTCTCGGTAACGGATA............................................................................................	20	3	8	0.13	1	1	0
..................................................GACTCTCGGCAACGGATATAT.........................................................................................	21	2	8	0.13	1	1	0
................................................ACTACTCTCGGCAACGGATA............................................................................................	20	3	9	0.11	1	1	0
.................................................CGACTCTCGGCAACGGATAGA..........................................................................................	21	3	10	0.10	1	1	0
...................................................ACTCTCGGCAACGCATATCT.........................................................................................	20	3	10	0.10	1	1	0
........................TCTCTCAGCTGGTCCAGAATGTGGT...............................................................................................................	25	0	20	0.10	2	0	2
................................................................................................TGCCGAAAGTCCACACAGAGACG.........................................	23	0	20	0.05	1	1	0
................................................ACCACTCTCGGCAACGGA..............................................................................................	18	3	20	0.05	1	1	0
...............................................TACGACTCTCGGCAACGGA..............................................................................................	19	3	20	0.05	1	1	0
..........................TCTCAGCTGGTCCAGAATGTGGT...............................................................................................................	23	0	20	0.05	1	0	1

Species	Coordinate	ID	Alignment
droGri2	scaffold_14542:3195-3354 +	dgr_67	TCCAAGCTCGTTATGAATTTT-GCCTCTCTCAGCTGGTCCAGAATGTGGTGGACTCTCGGCAACGGATATGCATCTTTTATAGATTTGCTGTTTAGTTGCCGAAAGTCCACACAGAGACGCCATTTTCCCGTTTTCTTTT---TCACCTTCACGATTGGTGCGC
droVir3	scaffold_12961:220117-220275 +		TTCAGAGTGA-AATTAAGCGG-GCGTGACGCAACTGTTCAAGGATGTGATAAACCCTGGGAACAGGATAAGCATCTGTGATGGAATGCGCGTTTAGTTGGTGGTAGTCGATGCACATACGCCATTCGCCAGTCTTCTTTT---TGACTCAGACGATTGGGGCGC
droMoj3	scaffold_3530:2275-2434 +		TCCAAGCTGCTGATGTAGCGC-GCCTCTCGCAGCTGGTCCAGAATGTGATGCACACGCGGCAAAGGGTATGCATCTTTGATAGATCTGCTGTTTAGCTGTCGAAAATCCACACATAGCCGCCACTTCCCATTCTTCTTAC---GAACCATGACAATCGGCGCGC
droWil2	scf2_1100000004963:263533-263695 +		TCCAAGCTGCTTATGAACCTT-GCCTCACGCAATTGATTTAGTATATAGTCGATACGTGGCATCGGATATGCATCCTTTATAGACTTTGCGTTGATTTGTCTAAAATCCACGCATAGTCTCCATTTGCCCGTTTGCTTTTTCTTTACCATTACTATGGGTGAAC
dp5	Unknown_group_326:10060-10219 +		TCTAAGCTACTAATGAACCGT-GCCTCCCTGAGCTGGTCCAAAATATAGTCTATTCTTGGCATGGGGTATGCATCCTTGATGGACTTCGCGTTTATCTGTCTGAAGTCCACGCATAAACTCCACTTTCCCGTCTTCTTTT---TGACCATCACGATGGGTGAAC
droPer2	scaffold_657:1165-1324 +		TCTAAGCTACTAATGAACCGT-GCCTCCCTGAGTTGGTCCAAAATATAGTCTATTCTTGGCATGGGGTATGCATCTTTGATGGACTTCGCGTTTATCTGTCTGAAGTCCACGCATAATCTCCACTTTCCCGTCTTCTTTT---TGACCATCACGATGGGTGAGC
droAna3	scaffold_13250:3402483-3402642 +		TCCAGGCTGCTGAAAAATTTT-GCCTCTCTCAATTGTTCCAAAATGAAGTTTATTCTTGGCATAGGGTACGCATCTTTCACTGACTTTGCGTTTATTTGTCGGAAATCCACGCACATTCTCCATTGTCCCGTCTTTTTCT---TCACCATGACAATGGGTGAGC
droBip1	scf7180000394318:7580-7739 -		TCGAGGCTGCTGAAGAATCTG-GCCTCTCTCAGCTGTTCTAAAATGAAGTGTATCCGTGGCATTGGGTACGCATCCTTTATTGATTTTGCGTTGATCTGTCGAAAGTCTACGCACATCCTCCATTGACCCGTCTTCTTCT---TCACCATCACAATGGGTGAAC
droKik1	scf7180000301914:5288-5447 +		TCCAAGGTCGAGATGTATTTG-GCGTTTCTCAGACGCTCTAAAATGTGGTTAATCCGCGGAAGCGGATATGCATCCGGGATGGATTTGTCGTTTAGTTGTCGGTAGTCGACACACATGCGCCATTGGCCGGTTTTCTTAC---GCACCAGGACTAAGGGGGCAC
droFic1	scf7180000451733:27164-27322 +		TCCAGGCTACTTATATATTTT-GCCTCTTTTAACTGATCTAGAATGTAGTTAATCATAGGCATTGGGTACGCATCCTTTATCGACTTCCCGTTTATCTGCCGCAAAGCTACGCACAGACTCCATTTTCCCGTCTTCTTCT---TCACCATGACGATTGAAG-GC
droEle1	scf7180000487317:7190-7350 -		TCGAGGCTGCTAATATATTTTAGCTTCTCGGAGTTGGTCCAGGATGTAGTTGATCATCGGCATTGGATATGCATCCTTCACGGATTTTGCGTTGATCTGCCTGAAATCCACACAGAGCCTCCATTTGCCGGTCTTCTTTC---TCACCATGACTATTGGTGAGC
droRho1	scf7180000763102:985-1144 -		TCTAGACTGCTTATATATTTC-GCCTCTCTGAGTTGGTCCAGGATATAGTTGATTCGTGGCATCGGGTAGGCATCTTTTATGGACTTCGCGTTTATTTGTCTGAAATCCACGCATAGCCTCCACTTGCCCGTTTTCTTTT---TCACCATCACGATGGGCGAGC
droBia1	scf7180000299578:11043-11202 +		TCCAAGCTGCTTATGTACCGT-GCCTCTCTCAGCTGGTCGAGGATATAATTTATTCGAGGCATCGGGTAGGCATCCTTTATCGATTTGGCGTTGATCTGCCTGAAGTCGACGCACAGTCTCCACTTGCCCGTCTTCTTCC---TAACCATCACGATGGGAGAGC
droTak1	scf7180000415089:2229-2388 -		TCAAGGCTGCTTATATATGTC-GCCTCTCGTAGCTGTTCGAGAATGTGGTTCATTCTTGGTAGTGGGTAGGCGTCTTTTTCCGATCTGCTATTCAGCTGCCTAAAGTCTACACATAGACGCCATTTTCCCGTCTTCTTTT---TCACCATCACTATCGGGGCGC
droEug1	scf7180000408208:26644-26803 +		TCGAGCGTCGACATGTACTTG-GCATGGCGCAGACGCTCCAAGATGTGCGTTATCCTTGGCAGCGGGTATGCATCTGGAATAGAATGGGCATTTAGTTGTCGAAAATCTACACATAGTCGCATCTCTCCAGATTTCTTGC---CCACGAGTACAATAGGGGCGC
dm3	chr3RHet:2096190-2096349 -		TCTAAAATGCTTATATACATC-GCCTCCTTTAGCTGATCCAGGATGTAATTTATCATCGGCATCGGGTACGCATCCTTCACGGACCTTGCGTTTATCTGCCGGAAATCCACGCATAATCTCCATTGTCCTGTTTTCTTTC---TCACCATCACTATCGGTGAGC
droSim2	node_38109:100-259 +		TCCAGACTGCTTATGTATTTC-GCCTCCCTTAATTGATCCAGAATGTAGTTGATCATTGGCATCGGGTACGCGTCCTTCACGGACTTTGCGTTTATTTGGCGGAAATCCACACACAAACGCCACTGACCCGTCTTCTTTT---TCACCATCACTATGGGAGAGC
droSec2	scaffold_548:5293-5452 +		TCTATACTGCTTATGTACTTC-GCCTCCTTTAGCTGGTCCAGGATGTAATTTATCATCGGCATCGTGTACGCATCCTTTACGGACCTTGCGTTTATCTGCCGGAAATCCACGCACAGTCTCCATTGCCCTGTTTTCTTTC---TCACCATCACTATCGGTGAGC
droYak3	v2_chr2h_random_005:348990-349149 -		TCCAGGCTGCTTATAAATCGC-GCCTCCCTTAGTTGGTCGAGGATGTAGTTTATCCGTGGCATCGGGTAGGCATCCTTTATGGAGTTCGCGTTTATCTGCCTGAAGTCCACGCATAGTCTCCATTTTCCCGTTTTCTTCT---TCACCATGACGATGGGTGAGC
droEre2	scaffold_4845:1387225-1387384 +		TCCAGGCTGGTTATGTATTTC-GCCTCCCTTAACTGGTCCAGAATGTAGTTAATCATTGGCATTGGATACGCGTCCTTCACGGACCTCGCGTTTATCTGGCGAAAATCCACACACAACCTCCATTGACCCGTCTTCTTCT---TCACCATCACTATTGGTGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

TCCAAGCTCGTTATGAATTTT-GCCTCTCTCAGCTGGTCCAGAATGTGGTGGACTCTCGGCAACGGATATGCATCTTTTATAGATTTGCTGTTTAGTTGCCGAAAGTCCACACAGAGACGCCATTTTCCCGTTTTCTTTT---TCACCTTCACGATTGGTGCGC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...................................................GACTCTCGGCAACGGATA...............................................................................................	18	3	33.33	100	100	0
...................................................GACTCTCGGCAACGGATAT..............................................................................................	19	3	8.67	26	26	0
...................................................GACTCTCGGCAACGGATATCT............................................................................................	21	6	5.00	30	30	0
...................................................GACTCTCGGCAACGGATATC.............................................................................................	20	5	3.00	15	15	0
.....................................................CTCTCGGCAACGGATATCT............................................................................................	19	7	2.86	20	20	0
....................................................ACTCTCGGCAACGGATATCT............................................................................................	20	6	2.83	17	17	0
....................................................ACTCTCGGCAACGGATAT..............................................................................................	18	3	2.33	7	7	0
....................................................ACTCTCGGCAACGGATATC.............................................................................................	19	5	1.00	5	5	0
....................................................ACTCTCGGCAACGGATATCTC...........................................................................................	21	7	0.71	5	5	0
...................................................GACTCTCGGCAACGGATATCTC...........................................................................................	22	7	0.71	5	5	0
.....................................................CTCTCGGCAACGGATATCTC...........................................................................................	20	9	0.44	4	4	0
.....................................................CTCTCGGCAACGGATATC.............................................................................................	18	5	0.40	2	2	0
...................................................GACTCTCGGCAACGGATAC..............................................................................................	19	3	0.33	1	1	0
......................................................TCTCGGCAACGGATATCT............................................................................................	18	11	0.18	2	2	0
...................................................GACTCTCGGCAACGGATATAT............................................................................................	21	8	0.13	1	1	0
.........................TCTCTCAGCTGGTCCAGAATGTGGT..................................................................................................................	25	20	0.10	2	0	2
.................................................................................................TGCCGAAAGTCCACACAGAGACG............................................	23	20	0.05	1	1	0
...........................TCTCAGCTGGTCCAGAATGTGGT..................................................................................................................	23	20	0.05	1	0	1

droVir3

TTCAGAGTGA-AATTAAGCGG-GCGTGACGCAACTGTTCAAGGATGTGATAAACCCTGGGAACAGGATAAGCATCTGTGATGGAATGCGCGTTTAGTTGGTGGTAGTCGATGCACATACGCCATTCGCCAGTCTTCTTTT---TGACTCAGACGATTGGGGCGC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................................CCCTGGGAACAGGATAAGCATCTGT......................................................................................	25	1	5.00	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................GTGGTAGTCGATGCACATACGCCATT.......................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................GTGGTAGTCGATGCACATACGCCAT........................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................CCCTGGGAACAGGATAAGCATCTGTGA....................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACTCAGACGATTGGGG...	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACTCAGACGATTGGGGC..	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................GTGGTAGTCGATGCACATACGCCATTCG.....................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................CCCTGGGAACAGGATAAGCAT..........................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................GTGGTAGTCGATGCACATACGCCA.........................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TGGGAACAGGATAAGCATCT........................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................GGGAACAGGATAAGCATC.........................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................GGGAACAGGATAAGCATCTG.......................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................GGGAACAGGATAAGCATCT........................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TCCAAGCTGCTGATGTAGCGC-GCCTCTCGCAGCTGGTCCAGAATGTGATGCACACGCGGCAAAGGGTATGCATCTTTGATAGATCTGCTGTTTAGCTGTCGAAAATCCACACATAGCCGCCACTTCCCATTCTTCTTAC---GAACCATGACAATCGGCGCGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................................CTGGTCCAGAATGTGATGCACACGCGG........................................................................................................	27	20	11.45	229	146	29	0	0	53	1
.................................CTGGTCCAGAATGTGATGCACACGCGGC.......................................................................................................	28	20	5.50	110	52	4	0	0	54	0
.................................CTGGTCCAGAATGTGATGCACACGCG.........................................................................................................	26	20	5.40	108	87	15	0	0	4	2
.................................CTGGTCCAGAATGTGATGCACACGC..........................................................................................................	25	20	5.10	102	0	23	0	0	76	3
.........................................................................................................................................TAC---GAACCATGACAATCGGCGCGC	24	20	4.15	83	61	0	0	0	20	2
.................................CTGGTCCAGAATGTGATGCACACG...........................................................................................................	24	20	3.20	64	42	13	0	0	9	0
.....................................TCCAGAATGTGATGCACACGCGGCA......................................................................................................	25	20	3.15	63	52	0	0	0	11	0
...................................................................................................TCGAAAATCCACACATAGCCGCCAC........................................	25	20	2.95	59	38	1	0	0	20	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCCAC........................................	27	20	2.60	52	47	0	0	0	5	0
.....................................TCCAGAATGTGATGCACACGCGGC.......................................................................................................	24	20	2.35	47	44	3	0	0	0	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCCACT.......................................	28	20	1.90	38	25	0	0	0	13	0
.....................................TCCAGAATGTGATGCACACGCGG........................................................................................................	23	20	1.45	29	17	7	0	0	5	0
..................................TGGTCCAGAATGTGATGCACACGCGG........................................................................................................	26	20	1.35	27	25	0	0	0	1	1
.........................................................................................................................................TAC---GAACCATGACAATCGGCGCG.	23	20	1.30	26	23	1	0	0	1	1
........................................................................................................................................TTAC---GAACCATGACAATCGGCGCGC	25	20	1.20	24	15	0	0	0	9	0
.........................................................................................................................................TAC---GAACCATGACAATCGGCGC..	22	20	1.15	23	18	0	0	0	4	1
.................................CTGGTCCAGAATGTGATGCACACGCGGCA......................................................................................................	29	20	1.15	23	15	0	0	0	8	0
TCCAAGCTGCTGATGTAGCGC-GCCTC.........................................................................................................................................	26	4	1.00	4	2	0	0	0	2	0
.....................................TCCAGAATGTGATGCACACGCGGCAAA....................................................................................................	27	20	0.95	19	19	0	0	0	0	0
.....................................................................................................................................TTCTTAC---GAACCATGACAATCGGCGCGC	28	20	0.85	17	15	0	0	0	2	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCCA.........................................	26	20	0.75	15	15	0	0	0	0	0
....................................GTCCAGAATGTGATGCACACGCGG........................................................................................................	24	20	0.75	15	13	0	0	0	1	1
....................................GTCCAGAATGTGATGCACACGCGGC.......................................................................................................	25	20	0.75	15	5	0	0	0	10	0
..........................................................................................................TCCACACATAGCCGCCACTTCCCAT.................................	25	20	0.70	14	9	0	0	0	5	0
..................................TGGTCCAGAATGTGATGCACACGCGGC.......................................................................................................	27	20	0.70	14	13	0	0	0	1	0
....................................GTCCAGAATGTGATGCACACGCGGCA......................................................................................................	26	20	0.65	13	12	0	0	0	1	0
.....................................TCCAGAATGTGATGCACACGCGGCAAAG...................................................................................................	28	20	0.55	11	10	0	0	0	1	0
...........................................................................................................................................C---GAACCATGACAATCGGCGCGC	22	20	0.55	11	9	0	0	0	2	0
..................................TGGTCCAGAATGTGATGCACACGCG.........................................................................................................	25	20	0.55	11	11	0	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCACTTCC....................................	22	20	0.55	11	0	0	0	0	11	0
.....................................................................................................GAAAATCCACACATAGCCGCCACTTCC....................................	27	20	0.55	11	4	0	0	0	7	0
.....................................................................TGCATCTTTGATAGATCTGCTGTTTAG....................................................................	27	2	0.50	1	0	1	0	0	0	0
.....................................................................................................................................TTCTTAC---GAACCATGACAATCGGCGCG.	27	20	0.45	9	8	0	0	0	1	0
.................................CTGGTCCAGAATGTGATGCACAC............................................................................................................	23	20	0.45	9	7	0	0	0	2	0
.......TGCTGATGTAGCGC-GCCTCTCGCAGC..................................................................................................................................	26	20	0.40	8	0	3	0	0	5	0
...........................................................................................................................................C---GAACCATGACAATCGGCGC..	20	20	0.40	8	4	0	0	0	4	0
....................................................................................................CGAAAATCCACACATAGCCGCCAC........................................	24	20	0.40	8	8	0	0	0	0	0
..................................TGGTCCAGAATGTGATGCACACG...........................................................................................................	23	20	0.35	7	7	0	0	0	0	0
..................................................................................................................................TTCTTCTTAC---GAACCATGACAATCGGC....	27	20	0.35	7	3	0	0	0	4	0
.....................................................................................................................................TTCTTAC---GAACCATGACAATCGGCG...	25	20	0.30	6	5	0	0	0	1	0
.........................................................................................................................................TAC---GAACCATGACAATCGGCG...	21	20	0.30	6	6	0	0	0	0	0
.....................................TCCAGAATGTGATGCACACGCGGCAA.....................................................................................................	26	20	0.30	6	6	0	0	0	0	0
........................................................................................................................................TTAC---GAACCATGACAATCGGCGCG.	24	20	0.30	6	6	0	0	0	0	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCC..........................................	25	20	0.30	6	6	0	0	0	0	0
......................................................................................................................................TCTTAC---GAACCATGACAATCGGCGCGC	27	20	0.30	6	5	0	0	0	1	0
.....................................TCCAGAATGTGATGCACACGCG.........................................................................................................	22	20	0.30	6	6	0	0	0	0	0
TCCAAGCTGCTGATGTAGCGC-GCC...........................................................................................................................................	24	4	0.25	1	0	0	0	0	1	0
..........................................................................................................TCCACACATAGCCGCCACTTCCCA..................................	24	20	0.25	5	0	0	0	0	5	0
TCCAAGCTGCTGATGTAGC.................................................................................................................................................	19	4	0.25	1	1	0	0	0	0	0
..................................................................................................................................TTCTTCTTAC---GAACCATGACAATCGGCG...	28	20	0.25	5	5	0	0	0	0	0
...................................................................................................................................TCTTCTTAC---GAACCATGACAATCGGC....	26	20	0.25	5	2	1	0	0	2	0
.....................................................................................................GAAAATCCACACATAGCCGCCACTTC.....................................	26	20	0.25	5	0	0	0	0	5	0
..........TGATGTAGCGC-GCCTCTCGCAGCTGG...............................................................................................................................	26	20	0.25	5	3	2	0	0	0	0
...........................................................................................................................................C---GAACCATGACAATCGGCGCG.	21	20	0.25	5	5	0	0	0	0	0
TCCAAGCTGCTGATGTAGCGC-GCCTCT........................................................................................................................................	27	4	0.25	1	1	0	0	0	0	0
.................................CTGGTCCAGAATGTGATGCACA.............................................................................................................	22	20	0.25	5	3	0	0	0	2	0
.............................................................................................TAGCTGTCGAAAATCCACACATAGCC.............................................	26	20	0.25	5	5	0	0	0	0	0
.....................................................................................................GAAAATCCACACATAGCCGCCACTTCCC...................................	28	20	0.25	5	0	0	0	0	5	0
...................................................................................................TCGAAAATCCACACATAGCCGCCACTTC.....................................	28	20	0.25	5	0	0	0	0	5	0
................................................................................................CTGTCGAAAATCCACACATAGCCGCCAC........................................	28	20	0.20	4	4	0	0	0	0	0
..........................................................................................................................................AC---GAACCATGACAATCGGCGCGC	23	20	0.20	4	4	0	0	0	0	0
...................................................................................................TCGAAAATCCACACATAGCCGCC..........................................	23	20	0.20	4	4	0	0	0	0	0
.....................................................................................................................................TTCTTAC---GAACCATGACAATCGGCGC..	26	20	0.20	4	0	0	0	0	4	0
...................................................................................................TCGAAAATCCACACATAGCCGCCACTT......................................	27	20	0.20	4	4	0	0	0	0	0
.....................................................................................................................................TTCTTAC---GAACCATGACAATCGGC....	24	20	0.20	4	3	0	0	0	1	0
..................................................................................................GTCGAAAATCCACACATAGCCGCCAC........................................	26	20	0.20	4	3	0	0	0	1	0
..................................................................................................GTCGAAAATCCACACATAGCCGCCACT.......................................	27	20	0.20	4	3	0	0	0	1	0
.................................CTGGTCCAGAATGTGATGCACACGCGA........................................................................................................	27	20	0.20	4	3	0	0	0	1	0
......................................CCAGAATGTGATGCACACGCGG........................................................................................................	22	20	0.20	4	4	0	0	0	0	0
.....................................................................................................GAAAATCCACACATAGCCGCCACT.......................................	24	20	0.15	3	0	0	0	0	3	0
......................................CCAGAATGTGATGCACACGCGGC.......................................................................................................	23	20	0.15	3	3	0	0	0	0	0
.................................................................................................TGTCGAAAATCCACACATAGCC.............................................	22	20	0.15	3	3	0	0	0	0	0
...........................................................................................................................................C---GAACCATGACAATCGGC....	18	20	0.15	3	3	0	0	0	0	0
.............................................................................................TAGCTGTCGAAAATCCACACATAGC..............................................	25	20	0.15	3	0	0	0	0	3	0
........................................................................................................................................TTAC---GAACCATGACAATCGGCGC..	23	20	0.15	3	2	0	0	0	1	0
..................................................................................................................................TTCTTCTTAC---GAACCATGACAATCGGCGC..	29	20	0.15	3	3	0	0	0	0	0
......................................CCAGAATGTGATGCACACGCGGCAAAG...................................................................................................	27	20	0.15	3	3	0	0	0	0	0
...................................................................................................................................TCTTCTTAC---GAACCATGACAATCGGCGC..	28	20	0.15	3	2	0	0	0	1	0
...........................TCGCAGCTGGTCCAGAATGTGATGC................................................................................................................	25	20	0.15	3	2	0	0	0	1	0
...................................GGTCCAGAATGTGATGCACACGCGG........................................................................................................	25	20	0.15	3	3	0	0	0	0	0
.......................................................................................................AAATCCACACATAGCCGCCACT.......................................	22	20	0.15	3	0	0	0	0	3	0
...................................................................................................................................TCTTCTTAC---GAACCATGACAATCGGCG...	27	20	0.15	3	3	0	0	0	0	0
.......................................................................................................................................CTTAC---GAACCATGACAATCGGCGCGC	26	20	0.15	3	3	0	0	0	0	0
..........................................AATGTGATGCACACGCGGCAAAGG..................................................................................................	24	20	0.15	3	1	0	0	0	2	0
......................................................................................................AAAATCCACACATAGCCGCCACTTCCC...................................	27	20	0.15	3	0	0	0	0	3	0
.....................................TCCAGAATGTGATGCACACGCGGCAAAGG..................................................................................................	29	20	0.15	3	1	0	0	0	2	0
.................................CTGGTCCAGAATGTGATGCACACGCGT........................................................................................................	27	20	0.15	3	3	0	0	0	0	0
...................................................................................................TCGAAAATCCACACATAGCCGCCACT.......................................	26	20	0.15	3	0	2	0	0	0	1
......................................CCAGAATGTGATGCACACGCGGCA......................................................................................................	24	20	0.15	3	3	0	0	0	0	0
.............................................................................................................................TCCCATTCTTCTTAC---GAACCATGACAAT........	28	20	0.15	3	2	0	0	0	1	0
........................................................................................................AATCCACACATAGCCGCCACT.......................................	21	20	0.15	3	0	0	0	0	3	0
.........................................................................................................................................TAC---GAACCATGACAATCGG.....	19	20	0.10	2	2	0	0	0	0	0
..................................................................................................GTCGAAAATCCACACATAGCCGCCA.........................................	25	20	0.10	2	2	0	0	0	0	0
..................................TGGTCCAGAATGTGATGCACACGC..........................................................................................................	24	20	0.10	2	0	2	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCACT.......................................	19	20	0.10	2	2	0	0	0	0	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCCACC.......................................	28	20	0.10	2	0	0	0	0	2	0
...........................TCGCAGCTGGTCCAGAATGTGATGCA...............................................................................................................	26	20	0.10	2	2	0	0	0	0	0
.............................................................................................................ACACATAGCCGCCACTTCCCAT.................................	22	20	0.10	2	0	0	0	0	2	0
............................................TGTGATGCACACGCGGCAAAGGG.................................................................................................	23	20	0.10	2	2	0	0	0	0	0
...........................................................................................................CCACACATAGCCGCCACTTCCCATTCTTC............................	29	20	0.10	2	1	0	0	0	1	0
.................................................................................................TGTCGAAAATCCACACATAGCCGCCACTT......................................	29	20	0.10	2	1	0	0	0	1	0
..........................................................................................................TCCACACATAGCCGCCACTTCCCATTC...............................	27	20	0.10	2	0	0	0	0	0	2
....................................GTCCAGAATGTGATGCACACGCG.........................................................................................................	23	20	0.10	2	2	0	0	0	0	0
............................................................................................................CACACATAGCCGCCACTTCCCATT................................	24	20	0.10	2	1	0	0	0	1	0
..........................................................................................................TCCACACATAGCCGCCACTTCCCATC................................	26	20	0.10	2	0	0	0	0	2	0
..........TGATGTAGCGC-GCCTCTCGCAGCT.................................................................................................................................	24	20	0.10	2	1	0	0	0	1	0
......................................................................................................................................TCTTAC---GAACCATGACAATCGGCG...	24	20	0.10	2	2	0	0	0	0	0
...................................GGTCCAGAATGTGATGCACACGCG.........................................................................................................	24	20	0.10	2	2	0	0	0	0	0
..............................................................................................................CACATAGCCGCCACTTCCCATTC...............................	23	20	0.10	2	1	0	0	0	1	0
......................................................................................................................................TCTTAC---GAACCATGACAATCGGCGC..	25	20	0.10	2	2	0	0	0	0	0
.................................................................................................TGTCGAAAATCCACACATAGCCG............................................	23	20	0.10	2	0	0	0	0	2	0
..............................................................................................AGCTGTCGAAAATCCACACATAGCC.............................................	25	20	0.10	2	1	0	0	0	1	0
......................................................................................................................................TCTTAC---GAACCATGACAATCGGCGCG.	26	20	0.10	2	1	0	0	0	1	0
...............................................................................................................................................GAACCATGACAATCGGCGC..	19	20	0.10	2	2	0	0	0	0	0
........................CTCTCGCAGCTGGTCCAGAATGTG....................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
...................................................................................................................................TCTTCTTAC---GAACCATGACAATC.......	23	20	0.10	2	1	0	0	0	1	0
.....................................TCCAGAATGTGATGCACACG...........................................................................................................	20	20	0.05	1	1	0	0	0	0	0
...................................GGTCCAGAATGTGATGCACACGC..........................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.............................................................................................................ACACATAGCCGCCACTTCCCATTC...............................	24	20	0.05	1	0	0	0	0	1	0
..........................................AATGTGATGCACACGCGGCAAAG...................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.................................................TGCACACGCGGCAAAGGGTATGCATC.........................................................................................	26	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................CTTAC---GAACCATGACAATCGG.....	21	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................TTCTTCTTAC---GAACCATGACAATCG......	25	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................CTTCTTAC---GAACCATGACAATCGGCG...	26	20	0.05	1	1	0	0	0	0	0
........GCTGATGTAGCGC-GCCTCTCGC.....................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................CTTCCCATTCTTCTTAC---GAACCATGACAA.........	29	20	0.05	1	1	0	0	0	0	0
.......................................CAGAATGTGATGCACACGCGGCAAA....................................................................................................	25	20	0.05	1	1	0	0	0	0	0
...........................................................................................TTTAGCTGTCGAAAATCCACACATAGCC.............................................	28	20	0.05	1	1	0	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCACTT......................................	20	20	0.05	1	1	0	0	0	0	0
........................................................................................................AATCCACACATAGCCGCCAC........................................	20	20	0.05	1	0	0	0	0	1	0
.................................................................................................................ATAGCCGCCACTTCCCATTCTT.............................	22	20	0.05	1	1	0	0	0	0	0
........................CTCTCGCAGCTGGTCCAGAATGTGA...................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.............TGTAGCGC-GCCTCTCGCAGCTGGTC.............................................................................................................................	25	20	0.05	1	0	0	0	0	1	0
..............................................TGATGCACACGCGGCAAAGGGTA...............................................................................................	23	20	0.05	1	1	0	0	0	0	0
.....................................................................................................GAAAATCCACACATAGCCGCCACTT......................................	25	20	0.05	1	1	0	0	0	0	0
.........................................................................................................ATCCACACATAGCCGCCACTTCCCATT................................	27	20	0.05	1	1	0	0	0	0	0
.................................CTGGTCCAGAATGTGATGCACACGT..........................................................................................................	25	20	0.05	1	1	0	0	0	0	0
..........................CTCGCAGCTGGTCCAGAATGTGATG.................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.......TGCTGATGTAGCGC-GCCTCTCGCAGCT.................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
.................................CTGGTCCAGAATGTGATGCACACGCGC........................................................................................................	27	20	0.05	1	0	0	0	0	1	0
.........CTGATGTAGCGC-GCCTCTCGCAGC..................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
.....................................TCCAGAATGTGATGCACACGC..........................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.................................CTGGTCCAGAATGTGATGCACACGCGGT.......................................................................................................	28	20	0.05	1	1	0	0	0	0	0
............................................TGTGATGCACACGCGGCAAAGGGT................................................................................................	24	20	0.05	1	0	0	0	0	1	0
................................GCTGGTCCAGAATGTGATGCACACG...........................................................................................................	25	20	0.05	1	0	0	0	0	1	0
.........................................................................................................ATCCACACATAGCCGCCACTTCCC...................................	24	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................CTTCCCATTCTTCTTAC---GAACCATGAC...........	27	20	0.05	1	1	0	0	0	0	0
..........TGATGTAGCGC-GCCTCTCGCAGC..................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCACTTC.....................................	21	20	0.05	1	1	0	0	0	0	0
....................................GTCCAGAATGTGATGCACACGCGGCAA.....................................................................................................	27	20	0.05	1	1	0	0	0	0	0
...........................................................................................................CCACACATAGCCGCCACT.......................................	18	20	0.05	1	1	0	0	0	0	0
.........................................................................................................ATCCACACATAGCCGCCAC........................................	19	20	0.05	1	0	0	0	0	1	0
.......TGCTGATGTAGCGC-GCCTCTCGCAG...................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
................................................................................................................................CATTCTTCTTAC---GAACCATGACAA.........	24	20	0.05	1	1	0	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCAC........................................	18	20	0.05	1	1	0	0	0	0	0
.......TGCTGATGTAGCGC-GCCTCTCGCAGCTGG...............................................................................................................................	29	20	0.05	1	1	0	0	0	0	0
.................................CTGGTCCAGAATGTGATGCAC..............................................................................................................	21	20	0.05	1	0	0	0	0	1	0
............................................................................................................................TTCCCATTCTTCTTAC---GAACCATGACA..........	27	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................C---GAACCATGACAATCGTT....	18	20	0.05	1	0	0	0	0	1	0
........................................AGAATGTGATGCACACGCGG........................................................................................................	20	20	0.05	1	1	0	0	0	0	0
..........................................AATGTGATGCACACGCGGCAAAGGGT................................................................................................	26	20	0.05	1	1	0	0	0	0	0
................................................................................................CTGTCGAAAATCCACACATAGCCGC...........................................	25	20	0.05	1	0	0	0	0	1	0
.......................................CAGAATGTGATGCACACG...........................................................................................................	18	20	0.05	1	1	0	0	0	0	0
.........................TCTCGCAGCTGGTCCAGAATGTG....................................................................................................................	23	20	0.05	1	0	0	1	0	0	0
............................................TGTGATGCACACGCGGCAAAGGGTA...............................................................................................	25	20	0.05	1	1	0	0	0	0	0
...........................................ATGTGATGCACACGCGGCAAAGGGTA...............................................................................................	26	20	0.05	1	1	0	0	0	0	0
............................................................................................................................TTCCCATTCTTCTTAC---GAACCATG.............	24	20	0.05	1	1	0	0	0	0	0
..........................................................................................................TCCACACATAGCCGCCACTTCCCATT................................	26	20	0.05	1	0	1	0	0	0	0
...........................................................................................................CCACACATAGCCGCCACTTCCCATTCT..............................	27	20	0.05	1	1	0	0	0	0	0
.....................................................................................................GAAAATCCACACATAGCCGCCAC........................................	23	20	0.05	1	1	0	0	0	0	0
..................CGC-GCCTCTCGCAGCTGGTCC............................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................CTTCTTAC---GAACCATGACAATCGG.....	24	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................TCCCATTCTTCTTAC---GAACCATGACAA.........	27	20	0.05	1	1	0	0	0	0	0
..........TGATGTAGCGC-GCCTCTCGCA....................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................CTTCTTAC---GAACCATGACAATCGGCGC..	27	20	0.05	1	0	0	0	0	1	0
......................................................................................................AAAATCCACACATAGCCGCCACT.......................................	23	20	0.05	1	0	0	0	0	1	0
..............................................................................................AGCTGTCGAAAATCCACACATAGCCG............................................	26	20	0.05	1	1	0	0	0	0	0
.....................................TCCAGAATGTGATGCACACGCGGTT......................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................TCCCATTCTTCTTAC---GAACCATGACA..........	26	20	0.05	1	1	0	0	0	0	0
.................................CTGGTCCAGAATGTGATGCACACGCA.........................................................................................................	26	20	0.05	1	0	0	0	0	1	0
..........TGATGTAGCGC-GCCTCTCGC.....................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................TCTTCTTAC---GAACCATGACAATCGGCGCG.	29	20	0.05	1	1	0	0	0	0	0
...................................................................................................TCGAAAATCCACACATAGCCGCCACC.......................................	26	20	0.05	1	1	0	0	0	0	0
.....................................TCCAGAATGTGATGCACACGCGC........................................................................................................	23	20	0.05	1	0	0	0	0	1	0
............................CGCAGCTGGTCCAGAATGTGATGCAC..............................................................................................................	26	20	0.05	1	1	0	0	0	0	0
....................................GTCCAGAATGTGATGCACACGCGGT.......................................................................................................	25	20	0.05	1	1	0	0	0	0	0
..........TGATGTAGCGC-GCCTCTCGCAG...................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
...............TAGCGC-GCCTCTCGCAGCTGG...............................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
................................................................................................................CATAGCCGCCACTTCCCAT.................................	19	20	0.05	1	1	0	0	0	0	0
......................................................................................TGCTGTTTAGCTGTCGAAAATCCACACA..................................................	28	20	0.05	1	1	0	0	0	0	0
...............................................GATGCACACGCGGCAAAGGGT................................................................................................	21	20	0.05	1	0	0	0	0	1	0
....................................................................................................................................CTTCTTAC---GAACCATGACAATCGGC....	25	20	0.05	1	1	0	0	0	0	0
..................................................................................................GTCGAAAATCCACACATAGCCG............................................	22	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................TTAC---GAACCATGACAATCGGCG...	22	20	0.05	1	1	0	0	0	0	0
.....................................TCCAGAATGTGATGCACACGCGGCAAC....................................................................................................	27	20	0.05	1	0	0	0	0	1	0
.........................................................................................................ATCCACACATAGCCGCCACT.......................................	20	20	0.05	1	0	0	0	0	1	0
...................................................................................................TCGAAAATCCACACATAGCCGCCA.........................................	24	20	0.05	1	0	0	0	0	1	0

droWil2

TCCAAGCTGCTTATGAACCTT-GCCTCACGCAATTGATTTAGTATATAGTCGATACGTGGCATCGGATATGCATCCTTTATAGACTTTGCGTTGATTTGTCTAAAATCCACGCATAGTCTCCATTTGCCCGTTTGCTTTTTCTTTACCATTACTATGGGTGAAC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................................................TGTCTAAAATCCACGCATAGTCTCCATT.......................................	28	1	31.00	31	0	16	0	15	0
.................................................................................................TGTCTAAAATCCACGCATAGTCTCCA.........................................	26	1	18.00	18	0	7	0	11	0
.................................................................................................TGTCTAAAATCCACGCATAGTCTCCAT........................................	27	1	15.00	15	0	13	0	2	0
.......TGCTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	26	16	9.25	148	0	142	0	6	0
.......................................TAGTATATAGTCGATACGTGGCATCGG..................................................................................................	27	20	7.80	156	0	32	0	123	1
..........................................TATATAGTCGATACGTGGCATCGGA.................................................................................................	25	20	7.30	146	0	16	1	129	0
............................................................................................TGATTTGTCTAAAATCCACGCATAGTC.............................................	27	1	6.00	6	0	4	0	2	0
.....................................................................................................TAAAATCCACGCATAGTCTCCATT.......................................	24	1	5.00	5	0	5	0	0	0
..................................TGATTTAGTATATAGTCGATACGTGG........................................................................................................	26	20	3.70	74	0	27	0	47	0
.......................................TAGTATATAGTCGATACGTGGCATCG...................................................................................................	26	20	3.65	73	0	52	2	19	0
.................................................................GATATGCATCCTTTATAGACTTTGCGT........................................................................	27	2	3.50	7	0	0	0	7	0
...................................................................TATGCATCCTTTATAGACTTTGCGT........................................................................	25	3	3.33	10	0	3	2	5	0
..........................................................................................................TCCACGCATAGTCTCCATTTGCCCGTT...............................	27	3	3.33	10	0	3	0	7	0
.......................................TAGTATATAGTCGATACGTGGCATCGGA.................................................................................................	28	20	3.25	65	0	53	0	12	0
.....................................................................TGCATCCTTTATAGACTTTGCGTTGATT...................................................................	28	2	3.00	6	0	4	0	2	0
..................................................................................................................TAGTCTCCATTTGCCCGTTTGCTTT.........................	25	1	3.00	3	0	2	0	1	0
.......................................TAGTATATAGTCGATACGTGGCAT.....................................................................................................	24	20	2.60	52	0	38	0	14	0
.....................................................TACGTGGCATCGGATATGCATCCTT......................................................................................	25	20	2.10	42	0	36	0	6	0
...............................................................................................TTTGTCTAAAATCCACGCATAGTCTCCA.........................................	28	1	2.00	2	0	0	0	2	0
..................................................................................................GTCTAAAATCCACGCATAGTCTCCATT.......................................	27	1	2.00	2	0	1	0	1	0
.................................................................................................TGTCTAAAATCCACGCATAGTCTCC..........................................	25	1	2.00	2	0	1	0	1	0
..................................................................................................................TAGTCTCCATTTGCCCGTTTGCTTTT........................	26	1	2.00	2	0	1	0	1	0
.......................................TAGTATATAGTCGATACGTGGCATC....................................................................................................	25	20	1.95	39	1	35	0	3	0
..........TTATGAACCTT-GCCTCACGCAATTGATT.............................................................................................................................	28	16	1.94	31	0	24	0	7	0
...........TATGAACCTT-GCCTCACGCAATTGATT.............................................................................................................................	27	16	1.81	29	0	20	0	9	0
.............TGAACCTT-GCCTCACGCAATTGATT.............................................................................................................................	25	20	1.60	32	0	27	0	5	0
..........TTATGAACCTT-GCCTCACGCAATTGA...............................................................................................................................	26	16	1.56	25	0	25	0	0	0
..........................................................................................................TCCACGCATAGTCTCCATTTGCCCGT................................	26	3	1.33	4	0	1	0	3	0
..........................................TATATAGTCGATACGTGGCATCGG..................................................................................................	24	20	1.30	26	0	4	0	22	0
............................CGCAATTGATTTAGTATATAGTCGA...............................................................................................................	25	18	1.28	23	0	2	0	21	0
..................................TGATTTAGTATATAGTCGATACGTGGC.......................................................................................................	27	20	1.10	22	0	6	0	16	0
...............................................................................................TTTGTCTAAAATCCACGCATAGTCT............................................	25	1	1.00	1	0	0	0	1	0
...................................................................................................................AGTCTCCATTTGCCCGTTTGCTTTTTCT.....................	28	1	1.00	1	0	1	0	0	0
................................................................................................................CATAGTCTCCATTTGCCCGTTTGCTTT.........................	27	1	1.00	1	0	0	0	1	0
.................................................................................................TGTCTAAAATCCACGCATAGTCTC...........................................	24	1	1.00	1	0	0	0	1	0
.....................................................................................................TAAAATCCACGCATAGTCTCCATTTG.....................................	26	1	1.00	1	0	1	0	0	0
................................................................................................................CATAGTCTCCATTTGCCCGTTTGCTT..........................	26	1	1.00	1	0	0	0	1	0
..................................................................................................GTCTAAAATCCACGCATAGTCTCC..........................................	24	1	1.00	1	0	1	0	0	0
.....................................................................................................TAAAATCCACGCATAGTCTCCATTTGC....................................	27	1	1.00	1	0	0	0	1	0
.........................................................................................................ATCCACGCATAGTCTCCATT.......................................	20	1	1.00	1	0	1	0	0	0
.................................................................................................TGTCTAAAATCCACGCATAGTCT............................................	23	1	1.00	1	0	0	0	1	0
.................................................................................................TGTCTAAAATCCACGCATAGTCTCCT.........................................	26	1	1.00	1	0	1	0	0	0
...............................................................................................TTTGTCTAAAATCCACGCATAGTC.............................................	24	1	1.00	1	0	1	0	0	0
............................................................................................................CACGCATAGTCTCCATTTGCCCGTTTGCT...........................	29	1	1.00	1	0	1	0	0	0
................................................................................................................CATAGTCTCCATTTGCCCGTTTGC............................	24	1	1.00	1	0	0	0	1	0
.......................................................................CATCCTTTATAGACTTTGCGTTGATT...................................................................	26	2	1.00	2	0	2	0	0	0
.............................................................................................GATTTGTCTAAAATCCACGCATAGT..............................................	25	1	1.00	1	0	1	0	0	0
...............................................................................................TTTGTCTAAAATCCACGCATAGTCTCC..........................................	27	1	1.00	1	0	0	0	1	0
..........................................TATATAGTCGATACGTGGCATCGGATA...............................................................................................	27	19	1.00	19	0	14	0	5	0
.....................................................................TGCATCCTTTATAGACTTTGCGTTGAT....................................................................	27	2	1.00	2	0	2	0	0	0
.....................................................................TGCATCCTTTATAGACTTTGCGTTGA.....................................................................	26	2	1.00	2	0	2	0	0	0
.................................................TCGATACGTGGCATCGGATATGCATCCTT......................................................................................	29	20	0.90	18	0	16	0	2	0
..................................TGATTTAGTATATAGTCGATACGTGGCA......................................................................................................	28	20	0.90	18	0	17	0	1	0
.........................TCACGCAATTGATTTAGTATATAGTCGA...............................................................................................................	28	18	0.89	16	0	9	0	7	0
.....................................................................................................................................TGCTTTTTCTTTACCATTACTATGGGT....	27	10	0.80	8	0	0	0	8	0
..............................................................TCGGATATGCATCCTTTATAGACTT.............................................................................	25	7	0.71	5	0	4	0	1	0
.......TGCTTATGAACCTT-GCCTCACGCAA...................................................................................................................................	25	17	0.71	12	1	11	0	0	0
..............................................TAGTCGATACGTGGCATCGGATATGC............................................................................................	26	20	0.70	14	0	8	0	6	0
..........................................................................................................TCCACGCATAGTCTCCATTTGCCCG.................................	25	3	0.67	2	0	1	0	1	0
.................................TTGATTTAGTATATAGTCGATACGTGG........................................................................................................	27	20	0.65	13	0	7	0	6	0
.......TGCTTATGAACCTT-GCCTCACGCAAA..................................................................................................................................	26	17	0.59	10	0	5	0	5	0
.......................................................................................................................TCCATTTGCCCGTTTGCTTTTTCTT....................	25	19	0.58	11	0	8	0	3	0
..........TTATGAACCTT-GCCTCACGCAATTG................................................................................................................................	25	16	0.56	9	0	9	0	0	0
.......................................TAGTATATAGTCGATACGTGGCA......................................................................................................	23	20	0.55	11	0	9	0	2	0
...................................................................TATGCATCCTTTATAGACTTTGCGTTG......................................................................	27	2	0.50	1	0	1	0	0	0
.......................................................................CATCCTTTATAGACTTTGCGTTGAT....................................................................	25	2	0.50	1	0	1	0	0	0
.........................................................................TCCTTTATAGACTTTGCGTTGATTTGT................................................................	27	2	0.50	1	0	0	0	1	0
.........................................................................TCCTTTATAGACTTTGCGTTGATT...................................................................	24	2	0.50	1	0	0	0	1	0
...................................................................TATGCATCCTTTATAGACTTTGCGTTGA.....................................................................	28	2	0.50	1	0	1	0	0	0
.....................................................................TGCATCCTTTATAGACTTTGCGTTG......................................................................	25	2	0.50	1	0	1	0	0	0
..........................CACGCAATTGATTTAGTATATAGTCGA...............................................................................................................	27	18	0.50	9	0	4	0	5	0
..............................................................TCGGATATGCATCCTTTATAGACTTTG...........................................................................	27	2	0.50	1	0	1	0	0	0
.............................................................................TTATAGACTTTGCGTTGATTTGTCT..............................................................	25	2	0.50	1	0	1	0	0	0
......................................................................GCATCCTTTATAGACTTTGCGTTGATT...................................................................	27	2	0.50	1	0	1	0	0	0
..........................................................................CCTTTATAGACTTTGCGTTGATTTG.................................................................	25	2	0.50	1	0	1	0	0	0
..............................................TAGTCGATACGTGGCATCGGATATGCA...........................................................................................	27	20	0.45	9	0	0	0	9	0
........GCTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	25	16	0.44	7	0	7	0	0	0
.....................................TTTAGTATATAGTCGATACGTGGCA......................................................................................................	25	20	0.40	8	0	5	0	3	0
........................................AGTATATAGTCGATACGTGGCATCGGA.................................................................................................	27	20	0.40	8	0	7	0	1	0
...........TATGAACCTT-GCCTCACGCAATTGAT..............................................................................................................................	26	16	0.38	6	0	6	0	0	0
...........TATGAACCTT-GCCTCACGCAATTGA...............................................................................................................................	25	16	0.38	6	0	6	0	0	0
............................................TATAGTCGATACGTGGCATCGGATA...............................................................................................	25	19	0.37	7	0	6	0	1	0
.................................................TCGATACGTGGCATCGGATATGCATCC........................................................................................	27	20	0.35	7	0	5	0	2	0
..........................................................................................................TCCACGCATAGTCTCCATTTGCCCGTTC..............................	28	3	0.33	1	0	1	0	0	0
..........................................................................................................TCCACGCATAGTCTCCATTTGCCCGTTTG.............................	29	3	0.33	1	0	1	0	0	0
.........................................................................TCCTTTATAGACTTTGCGT........................................................................	19	3	0.33	1	0	0	0	1	0
.........................TCACGCAATTGATTTAGTATATAGTCG................................................................................................................	27	18	0.33	6	0	6	0	0	0
..........TTATGAACCTT-GCCTCACGCAATTGAT..............................................................................................................................	27	16	0.31	5	0	5	0	0	0
........................................AGTATATAGTCGATACGTGGCATCGG..................................................................................................	26	20	0.30	6	0	5	0	1	0
TCCAAGCTGCTTATGAACCTT-GCCTC.........................................................................................................................................	26	14	0.29	4	0	4	0	0	0
..............................................................TCGGATATGCATCCTTTATAGACT..............................................................................	24	7	0.29	2	0	2	0	0	0
............................................................CATCGGATATGCATCCTTTATAGACT..............................................................................	26	7	0.29	2	0	2	0	0	0
......CTGCTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	27	15	0.27	4	0	4	0	0	0
..................................................CGATACGTGGCATCGGATATGCATCCTT......................................................................................	28	20	0.25	5	0	3	0	2	0
...............................................AGTCGATACGTGGCATCGGATATGCA...........................................................................................	26	20	0.25	5	0	4	0	1	0
............................................TATAGTCGATACGTGGCATCGGA.................................................................................................	23	20	0.25	5	0	0	0	5	0
.................................................TCGATACGTGGCATCGGATATGCA...........................................................................................	24	20	0.25	5	0	2	0	3	0
............................................................................................................................TTGCCCGTTTGCTTTTTCTTTACCAT..............	26	20	0.25	5	0	4	0	1	0
.................................................TCGATACGTGGCATCGGATATGCATCCT.......................................................................................	28	20	0.25	5	0	3	0	2	0
.........................................................TGGCATCGGATATGCATCCTTTATAGA................................................................................	27	8	0.25	2	0	1	0	1	0
.......TGCTTATGAACCTT-GCCTCACGCA....................................................................................................................................	24	17	0.24	4	0	4	0	0	0
....AGCTGCTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	29	13	0.23	3	0	3	0	0	0
...AAGCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	26	13	0.23	3	0	3	0	0	0
.........................TCACGCAATTGATTTAGTATATAGTCGAT..............................................................................................................	29	18	0.22	4	0	4	0	0	0
.............................................................................................................................TGCCCGTTTGCTTTTTCTTTACCAT..............	25	20	0.20	4	0	4	0	0	0
........................................AGTATATAGTCGATACGTGGCATCG...................................................................................................	25	20	0.20	4	0	4	0	0	0
.....................................................................................................................................TGCTTTTTCTTTACCATTACTATGGG.....	26	10	0.20	2	0	2	0	0	0
.......................................TAGTATATAGTCGATACGTGGC.......................................................................................................	22	20	0.20	4	0	2	0	2	0
..........TTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	23	16	0.19	3	0	2	0	1	0
...........TATGAACCTT-GCCTCACGCAATT.................................................................................................................................	23	16	0.19	3	0	3	0	0	0
........................................................................................................................................TTTTTCTTTACCATTACTATGGGTGAAC	28	16	0.19	3	0	2	0	1	0
..........TTATGAACCTT-GCCTCACGCAATT.................................................................................................................................	24	16	0.19	3	0	3	0	0	0
.........CTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	24	16	0.19	3	0	3	0	0	0
.........................................................TGGCATCGGATATGCATCCTTTATAGACT..............................................................................	29	6	0.17	1	0	1	0	0	0
.......................................................................................................................TCCATTTGCCCGTTTGCTTTTTCT.....................	24	19	0.16	3	0	1	0	2	0
.......................................................................................................................TCCATTTGCCCGTTTGCTTTTTCTTT...................	26	19	0.16	3	0	3	0	0	0
....AGCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	25	13	0.15	2	0	2	0	0	0
..........................................TATATAGTCGATACGTGGCATCGGAT................................................................................................	26	20	0.15	3	0	2	0	1	0
......................................TTAGTATATAGTCGATACGTGGCATC....................................................................................................	26	20	0.15	3	0	3	0	0	0
........................................AGTATATAGTCGATACGTGGCA......................................................................................................	22	20	0.15	3	0	3	0	0	0
............................................TATAGTCGATACGTGGCATCGGAT................................................................................................	24	20	0.15	3	0	1	0	2	0
.....................................................TACGTGGCATCGGATATGCATCCT.......................................................................................	24	20	0.15	3	0	0	0	3	0
TCCAAGCTGCTTATGAACCTT-GCCTCA........................................................................................................................................	27	14	0.14	2	0	1	0	1	0
............................................................CATCGGATATGCATCCTTTATAGACTT.............................................................................	27	7	0.14	1	0	1	0	0	0
.CCAAGCTGCTTATGAACCTT-GCCTC.........................................................................................................................................	25	14	0.14	2	0	2	0	0	0
.CCAAGCTGCTTATGAACCTT-GCCTCA........................................................................................................................................	26	14	0.14	2	0	2	0	0	0
.......TGCTTATGAACCTT-GCCTCACGCAATT.................................................................................................................................	27	16	0.13	2	0	2	0	0	0
...........TATGAACCTT-GCCTCACGCAATTG................................................................................................................................	24	16	0.13	2	0	2	0	0	0
......CTGCTTATGAACCTT-GCCTCACGC.....................................................................................................................................	24	16	0.13	2	0	2	0	0	0
.......TGCTTATGAACCTT-GCCTCACGCAATTG................................................................................................................................	28	16	0.13	2	0	2	0	0	0
......CTGCTTATGAACCTT-GCCTCACGCA....................................................................................................................................	25	16	0.13	2	0	2	0	0	0
........................................................................................................................................TTTTTCTTTACCATTACTATGGGTGAA.	27	16	0.13	2	0	2	0	0	0
........GCTTATGAACCTT-GCCTCACG......................................................................................................................................	21	17	0.12	2	0	2	0	0	0
........................CTCACGCAATTGATTTAGTATATAGTCGA...............................................................................................................	29	17	0.12	2	0	2	0	0	0
......................GCCTCACGCAATTGATTTAGTATATAG...................................................................................................................	27	18	0.11	2	0	2	0	0	0
....................T-GCCTCACGCAATTGATTTAGTATA......................................................................................................................	25	18	0.11	2	0	2	0	0	0
...................................................................................ACTTTGCGTTGATTTGTCTAAAATCCA......................................................	27	9	0.11	1	0	1	0	0	0
.........................TCACGCAATTGATTTAGTATATAGT..................................................................................................................	25	19	0.11	2	0	0	0	2	0
......................................................................................................................CTCCATTTGCCCGTTTGCTTTTTCT.....................	25	19	0.11	2	0	1	0	1	0
.....................................................................................................................TCTCCATTTGCCCGTTTGCTTTTTCTT....................	27	19	0.11	2	0	1	0	1	0
......................................................ACGTGGCATCGGATATGCATCCTT......................................................................................	24	20	0.10	2	0	2	0	0	0
........................................AGTATATAGTCGATACGTGGCAT.....................................................................................................	23	20	0.10	2	0	2	0	0	0
...................................GATTTAGTATATAGTCGATACGTGG........................................................................................................	25	20	0.10	2	0	2	0	0	0
.......................................TAGTATATAGTCGATACGTGGCATCGT..................................................................................................	27	20	0.10	2	0	2	0	0	0
....................................................................................................................................TTGCTTTTTCTTTACCATTACTATGGGT....	28	10	0.10	1	0	0	0	1	0
..................................TGATTTAGTATATAGTCGATACGTG.........................................................................................................	25	20	0.10	2	0	0	0	2	0
..............GAACCTT-GCCTCACGCAATTGATTTAG..........................................................................................................................	27	20	0.10	2	0	2	0	0	0
.........................................................TGGCATCGGATATGCATCCTTTAT...................................................................................	24	20	0.10	2	0	1	0	1	0
..................................................CGATACGTGGCATCGGATATGCATCCT.......................................................................................	27	20	0.10	2	0	0	1	1	0
........................................AGTATATAGTCGATACGTGGCATC....................................................................................................	24	20	0.10	2	0	2	0	0	0
.....................................................................................................................................TGCTTTTTCTTTACCATTACTAT........	23	20	0.10	2	0	2	0	0	0
.....................................TTTAGTATATAGTCGATACGTGG........................................................................................................	23	20	0.10	2	0	1	0	1	0
...................................................GATACGTGGCATCGGATATGCATCCTT......................................................................................	27	20	0.10	2	0	1	0	1	0
..............GAACCTT-GCCTCACGCAATTGATT.............................................................................................................................	24	20	0.10	2	0	2	0	0	0
............ATGAACCTT-GCCTCACGCAATTGATT.............................................................................................................................	26	20	0.10	2	0	2	0	0	0
.......................................TAGTATATAGTCGATACGTGG........................................................................................................	21	20	0.10	2	0	2	0	0	0
.....................................................TACGTGGCATCGGATATGCATCCTTTA....................................................................................	27	20	0.10	2	0	0	0	2	0
...........................................ATATAGTCGATACGTGGCATCGGA.................................................................................................	24	20	0.10	2	0	2	0	0	0
......................................TTAGTATATAGTCGATACGTGGCAT.....................................................................................................	25	20	0.10	2	0	2	0	0	0
.....................................TTTAGTATATAGTCGATACGTGGCAT.....................................................................................................	26	20	0.10	2	0	2	0	0	0
.......................................TAGTATATAGTCGATACGTGGCATCT...................................................................................................	26	20	0.10	2	0	1	0	1	0
....................................................................................................................................TTGCTTTTTCTTTACCATTACTATGGG.....	27	10	0.10	1	0	1	0	0	0
.....................................................................................................................................TGCTTTTTCTTTACCATTACTATGGGTG...	28	10	0.10	1	0	1	0	0	0
....................................................................................................................................TTGCTTTTTCTTTACCATTACTAT........	24	20	0.10	2	0	1	0	1	0
.......................................................................................TGCGTTGATTTGTCTAAAATCCACG....................................................	25	11	0.09	1	0	1	0	0	0
.CCAAGCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	28	13	0.08	1	0	1	0	0	0
TCCAAGCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	29	13	0.08	1	0	1	0	0	0
TCCAAGCTGCTTATGAACCTT-GCCTCAC.......................................................................................................................................	28	13	0.08	1	0	1	0	0	0
...AAGCTGCTTATGAACCTT-GCCTCACGCAA...................................................................................................................................	29	13	0.08	1	0	1	0	0	0
..CAAGCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	27	13	0.08	1	0	1	0	0	0
....AGCTGCTTATGAACCTT-GCCTCACGCAA...................................................................................................................................	28	13	0.08	1	0	1	0	0	0
..CAAGCTGCTTATGAACCTT-GCCTCA........................................................................................................................................	25	14	0.07	1	0	1	0	0	0
..CAAGCTGCTTATGAACCTT-GCC...........................................................................................................................................	22	14	0.07	1	0	1	0	0	0
.....GCTGCTTATGAACCTT-GCCTCACGCAAT..................................................................................................................................	28	14	0.07	1	0	1	0	0	0
TCCAAGCTGCTTATGAACCTT-GCCT..........................................................................................................................................	25	14	0.07	1	1	0	0	0	0
.....GCTGCTTATGAACCTT-GCCTCACG......................................................................................................................................	24	14	0.07	1	0	1	0	0	0
..CAAGCTGCTTATGAACCTT-G.............................................................................................................................................	20	15	0.07	1	0	1	0	0	0
...........TATGAACCTT-GCCTCACGCAAT..................................................................................................................................	22	16	0.06	1	0	1	0	0	0
........................................................................................................................................TTTTTCTTTACCATTACTATGGGTG...	25	16	0.06	1	0	1	0	0	0
.......TGCTTATGAACCTT-GCCTCACGCAATTGA...............................................................................................................................	29	16	0.06	1	0	1	0	0	0
.......TGCTTATGAACCTT-GCCTCACGCAATA.................................................................................................................................	27	16	0.06	1	0	1	0	0	0
...........................................ATATAGTCGATACGTGGCATCGGATATGC............................................................................................	29	16	0.06	1	0	0	1	0	0
.......TGCTTATGAACCTT-GCCTCACG......................................................................................................................................	22	17	0.06	1	0	1	0	0	0
...........................................................................................................................................TTCTTTACCATTACTATGGGTGAA.	24	17	0.06	1	0	1	0	0	0
........................CTCACGCAATTGATTTAGTATATAGTCG................................................................................................................	28	17	0.06	1	0	1	0	0	0
........GCTTATGAACCTT-GCCTCACGCA....................................................................................................................................	23	17	0.06	1	0	1	0	0	0
..........................................................................................................................................TTTCTTTACCATTACTATGGGTGAA.	25	17	0.06	1	0	1	0	0	0
.......TGCTTATGAACCTT-GCCTCACGC.....................................................................................................................................	23	17	0.06	1	0	1	0	0	0
...........................................................................................................................................TTCTTTACCATTACTATGGGTGAAC	25	17	0.06	1	0	1	0	0	0
..........TTATGAACCTT-GCCTCACGCA....................................................................................................................................	21	17	0.06	1	0	1	0	0	0
............................................TATAGTCGATACGTGGCATCGGATATG.............................................................................................	27	17	0.06	1	0	1	0	0	0
...........................ACGCAATTGATTTAGTATATAGTCGA...............................................................................................................	26	18	0.06	1	0	0	0	1	0
....................T-GCCTCACGCAATTGATTTAGTATATAG...................................................................................................................	28	18	0.06	1	0	1	0	0	0
..........................CACGCAATTGATTTAGTATATAGTCG................................................................................................................	26	18	0.06	1	0	1	0	0	0
.........................TCACGCAATTGATTTAGTATATAGTC.................................................................................................................	26	18	0.06	1	0	0	0	1	0
............................CGCAATTGATTTAGTATATAGTCGAT..............................................................................................................	26	18	0.06	1	0	1	0	0	0
...........................ACGCAATTGATTTAGTATATAGTCG................................................................................................................	25	18	0.06	1	0	0	0	1	0
.....................................................................................................................TCTCCATTTGCCCGTTTGCTTTTTCT.....................	26	19	0.05	1	0	1	0	0	0
.................................................................................................TGTCTAAAATCCACGCATA................................................	19	19	0.05	1	0	0	0	1	0
.....................................................................................................................TCTCCATTTGCCCGTTTGCTTTTTC......................	25	19	0.05	1	0	1	0	0	0
................................................................................................................................................TACCATTACTATGGGTGAA.	19	19	0.05	1	0	0	0	1	0

dp5

TCTAAGCTACTAATGAACCGT-GCCTCCCTGAGCTGGTCCAAAATATAGTCTATTCTTGGCATGGGGTATGCATCCTTGATGGACTTCGCGTTTATCTGTCTGAAGTCCACGCATAAACTCCACTTTCCCGTCTTCTTTT---TGACCATCACGATGGGTGAAC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................TATAGTCTATTCTTGGCATGGGG.................................................................................................	23	6	152.50	915	1	797	61	0	12	0	0	44	0	0
............................................TATAGTCTATTCTTGGCATGGGGT................................................................................................	24	6	27.33	164	0	113	34	0	6	0	7	4	0	0
............................................TATAGTCTATTCTTGGCATGGG..................................................................................................	22	9	25.78	232	0	213	12	0	4	0	0	3	0	0
............................................TATAGTCTATTCTTGGCATGGGGTA...............................................................................................	25	6	22.17	133	0	115	9	0	0	0	0	9	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGA.........	26	9	18.56	167	0	156	2	0	3	0	0	6	0	0
.............................................ATAGTCTATTCTTGGCATGGGG.................................................................................................	22	6	16.33	98	0	95	1	0	0	0	0	2	0	0
..........TAATGAACCGT-GCCTCCCTGAGC..................................................................................................................................	23	1	11.00	11	0	9	1	0	0	0	0	1	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCTG.................................................................	26	9	10.56	95	0	94	0	0	1	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGTGAAC	27	5	10.00	50	0	40	7	0	0	0	0	3	0	0
............................................TATAGTCTATTCTTGGCATGG...................................................................................................	21	9	8.11	73	0	59	12	0	1	0	0	1	0	0
..............................................................TGGGGTATGCATCCTTGATGGACTT.............................................................................	25	4	7.00	28	0	28	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGTCTAT..............................................................................................................	25	2	7.00	14	0	12	0	0	1	0	0	1	0	0
.............................................ATAGTCTATTCTTGGCATGGGGT................................................................................................	23	6	6.00	36	0	35	0	0	0	0	1	0	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATTCT...........................................................................................................	28	2	6.00	12	0	9	2	0	0	0	1	0	0	0
.......TACTAATGAACCGT-GCCTCCCTGAGC..................................................................................................................................	26	1	5.00	5	0	3	0	0	0	0	0	2	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATTC............................................................................................................	27	2	5.00	10	0	4	6	0	0	0	0	0	0	0
..........TAATGAACCGT-GCCTCCCTGAGCTG................................................................................................................................	25	1	5.00	5	0	4	0	0	0	0	0	1	0	0
..TAAGCTACTAATGAACCGT-GCCTCCC.......................................................................................................................................	26	8	4.25	34	0	28	6	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAGTC.................................................................................................................	26	4	4.00	16	0	15	0	0	0	0	1	0	0	0
..............................................................TGGGGTATGCATCCTTGATGGACT..............................................................................	24	4	3.50	14	0	14	0	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCTGTC...............................................................	28	6	3.17	19	0	18	0	0	0	0	0	1	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTA...............................................................................................	24	6	2.83	17	0	17	0	0	0	0	0	0	0	0
..TAAGCTACTAATGAACCGT-GCCTCC........................................................................................................................................	25	8	2.63	21	0	21	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGG.................................................................................................	21	6	2.50	15	0	15	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGG..................................................................................................	21	9	2.44	22	0	19	2	0	1	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATG.......	20	6	2.33	14	0	12	1	0	1	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCT..................................................................	25	9	2.33	21	0	20	1	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATC...................................................................	24	9	2.22	20	0	19	0	0	1	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGGTGAAC	28	5	2.20	11	0	7	4	0	0	0	0	0	0	0
..........TAATGAACCGT-GCCTCCCTGAGCTGG...............................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........TAATGAACCGT-GCCTCCCTGAGCT.................................................................................................................................	24	1	2.00	2	0	1	0	0	0	0	0	1	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATT.............................................................................................................	26	2	2.00	4	0	2	2	0	0	0	0	0	0	0
...........AATGAACCGT-GCCTCCCTGAGC..................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGATG..................................................................................	25	3	1.67	5	0	5	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATG....................................................................................................	20	9	1.67	15	0	10	5	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGG...................................................................................................	20	9	1.67	15	0	13	2	0	0	0	0	0	0	0
...............................................................................................................................CCCGTCTTCTTTT---TGACCATCACGA.........	25	9	1.56	14	0	14	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTAT..............................................................................................	26	4	1.50	6	0	4	1	0	0	0	0	1	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACG..........	25	9	1.44	13	0	12	0	0	0	0	0	1	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGATG.......	28	6	1.33	8	0	8	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGATG..................................................................................	26	3	1.33	4	0	1	1	0	2	0	0	0	0	0
.............TGAACCGT-GCCTCCCTGAGCTGGTC.............................................................................................................................	25	3	1.33	4	0	4	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGA....................................................................................	24	3	1.33	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGTG...	24	6	1.33	8	0	8	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGA....................................................................................	23	3	1.33	4	0	3	0	0	1	0	0	0	0	0
..TAAGCTACTAATGAACCGT-GCCTC.........................................................................................................................................	24	8	1.13	9	0	9	0	0	0	0	0	0	0	0
.........................................................................................................................................TTT---TGACCATCACGATGGGTGAAC	24	5	1.00	5	0	5	0	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCTGT................................................................	27	6	1.00	6	0	5	0	0	1	0	0	0	0	0
.......TACTAATGAACCGT-GCCTCCCTGAGCTG................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................TATCTGTCTGAAGTCCACGCATAAA..............................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................TTCCCGTCTTCTTTT---TGACCATCACGA.........	27	9	1.00	9	0	8	1	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGGT....	24	6	1.00	6	0	5	0	0	1	0	0	0	0	0
........................................................................................................................................TTTT---TGACCATCACGATGGGTGAAC	25	5	1.00	5	0	5	0	0	0	0	0	0	0	0
...............................................................GGGGTATGCATCCTTGATGGACTT.............................................................................	24	4	1.00	4	0	4	0	0	0	0	0	0	0	0
.............TGAACCGT-GCCTCCCTGAGCTGG...............................................................................................................................	23	3	1.00	3	0	2	0	0	1	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGTATG.............................................................................................	25	4	1.00	4	0	4	0	0	0	0	0	0	0	0
........ACTAATGAACCGT-GCCTCCCTGAGCTG................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................CATGGGGTATGCATCCTTGATGGACT..............................................................................	26	3	1.00	3	0	2	0	0	1	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCCTTGA....................................................................................	26	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.........CTAATGAACCGT-GCCTCCCTGAGC..................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGC................................................................................................	24	6	1.00	6	0	1	5	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCA......................................................................................................	18	9	0.89	8	0	0	8	0	0	0	0	0	0	0
.....................................................................................TTCGCGTTTATCTGTCTGAAGTC........................................................	23	7	0.86	6	0	5	1	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGGTG...	25	6	0.83	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGTGAA.	26	6	0.83	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGTGA..	25	6	0.83	5	0	3	2	0	0	0	0	0	0	0
................................................GTCTATTCTTGGCATGGGG.................................................................................................	19	6	0.83	5	0	5	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCAT.....................................................................................................	19	9	0.78	7	0	7	0	0	0	0	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGG........................................................................................................	26	9	0.78	7	0	7	0	0	0	0	0	0	0	0
.......................................................................................................................TCCACTTTCCCGTCTTCTTTT---TGACCA...............	27	8	0.75	6	0	5	0	0	0	0	0	1	0	0
................................................................................TGGACTTCGCGTTTATCTGTCTGAAG..........................................................	26	7	0.71	5	0	5	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGATGT.................................................................................	27	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGATGG.................................................................................	26	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.............TGAACCGT-GCCTCCCTGAGCT.................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.....................................................TTCTTGGCATGGGGTATGCATCCTTG.....................................................................................	26	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATG.......	21	6	0.67	4	0	4	0	0	0	0	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGGC.......................................................................................................	27	9	0.67	6	0	5	1	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGTGAAA	27	6	0.67	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................TCTTCTTTT---TGACCATCACGATG.......	23	6	0.67	4	0	4	0	0	0	0	0	0	0	0
...................................................TATTCTTGGCATGGGGTATGCAT..........................................................................................	23	3	0.67	2	0	1	0	0	1	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTAA..............................................................................................	26	6	0.67	4	0	4	0	0	0	0	0	0	0	0
...................................................TATTCTTGGCATGGGGTATGCATCCT.......................................................................................	26	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGAA...................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.............................................................ATGGGGTATGCATCCTTGATGGAC...............................................................................	24	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.........................................................TGGCATGGGGTATGCATCCTTGAT...................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTG.....................................................................................	23	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGATGGAC...............................................................................	28	3	0.67	2	0	1	0	0	0	0	1	0	0	0
......CTACTAATGAACCGT-GCC...........................................................................................................................................	18	9	0.67	6	0	6	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGAT...................................................................................	25	3	0.67	2	0	2	0	0	0	0	0	0	0	0
...........................................ATATAGTCTATTCTTGGCATGGGGTA...............................................................................................	26	6	0.67	4	0	1	0	0	0	0	0	3	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTAT....................................................................	23	10	0.60	6	0	5	1	0	0	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCCT.......................................................................................	23	5	0.60	3	0	2	1	0	0	0	0	0	0	0
..........................................................................................................................................TT---TGACCATCACGATGGGTGAAC	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
...................................................................TATGCATCCTTGATGGACTTCGCGT........................................................................	25	7	0.57	4	0	4	0	0	0	0	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCT...........................................................................................................	23	9	0.56	5	0	5	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGG..................................................................................................	20	9	0.56	5	0	5	0	0	0	0	0	0	0	0
...................................................TATTCTTGGCATGGGGTATG.............................................................................................	20	4	0.50	2	0	2	0	0	0	0	0	0	0	0
...............................AGCTGGTCCAAAATATAGTCTATTC............................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAGTCTA...............................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGGT....	23	6	0.50	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................TT---TGACCATCACGATGGGT....	19	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATTCA...........................................................................................................	28	2	0.50	1	0	0	0	0	1	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATTA............................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTA.....................................................................	22	10	0.50	5	0	5	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTATG.............................................................................................	27	4	0.50	2	0	1	0	0	1	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGG................................................................................................	24	6	0.50	3	0	2	0	0	0	0	0	1	0	0
..............................GAGCTGGTCCAAAATATAGTCTATTC............................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGTAT..............................................................................................	24	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.......TACTAATGAACCGT-GCCTCCCTG.....................................................................................................................................	23	8	0.50	4	0	4	0	0	0	0	0	0	0	0
.......TACTAATGAACCGT-GCCTCCCTGAG...................................................................................................................................	25	8	0.50	4	0	4	0	0	0	0	0	0	0	0
..............................GAGCTGGTCCAAAATATAGTCTAT..............................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................TGGGGTATGCATCCTTGATGGAC...............................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.CTAAGCTACTAATGAACCGT-GCC...........................................................................................................................................	23	8	0.50	4	0	3	1	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAGT..................................................................................................................	25	4	0.50	2	0	1	1	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGTCTATTCTA..........................................................................................................	29	2	0.50	1	0	0	1	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGTATGC............................................................................................	26	4	0.50	2	0	1	1	0	0	0	0	0	0	0
..............................GAGCTGGTCCAAAATATAGTCTATTCT...........................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................TCTATTCTTGGCATGGGG.................................................................................................	18	6	0.50	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................................................TGACCATCACGATGGGTGAAC	21	6	0.50	3	0	3	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGTA...............................................................................................	23	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGT..................................................................................................................	21	4	0.50	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................TTTCCCGTCTTCTTTT---TGACCATCACGA.........	28	9	0.44	4	0	4	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGT.................................................................................................	23	9	0.44	4	0	3	1	0	0	0	0	0	0	0
..........................................................................CCTTGATGGACTTCGCGTTTATCTG.................................................................	25	9	0.44	4	0	4	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGG...................................................................................................	19	9	0.44	4	0	3	1	0	0	0	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGGCA......................................................................................................	28	9	0.44	4	0	4	0	0	0	0	0	0	0	0
......................................................................................TCGCGTTTATCTGTCTGAAGTCCG......................................................	24	7	0.43	3	0	3	0	0	0	0	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTGTC...............................................................	21	7	0.43	3	0	3	0	0	0	0	0	0	0	0
............................................................................................TTATCTGTCTGAAGTCCACGCATA................................................	24	7	0.43	3	0	1	0	0	0	0	0	2	0	0
...................................................................TATGCATCCTTGATGGACTTCGCG.........................................................................	24	7	0.43	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................TTCGCGTTTATCTGTCTGAAGTCCACG....................................................	27	7	0.43	3	0	2	0	0	0	0	0	1	0	0
........................................................TTGGCATGGGGTATGCATCC........................................................................................	20	5	0.40	2	0	2	0	0	0	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCC........................................................................................	22	5	0.40	2	0	2	0	0	0	0	0	0	0	0
..TAAGCTACTAATGAACCGT-GCCT..........................................................................................................................................	23	8	0.38	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................TCCACTTTCCCGTCTTCTTTT---TGACC................	26	8	0.38	3	0	3	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGT................................................................................................	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGAT........	27	9	0.33	3	0	2	0	0	1	0	0	0	0	0
...............AACCGT-GCCTCCCTGAGCTGGTC.............................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTG.........................................................................................................	25	9	0.33	3	0	3	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGAAAA.................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTAA..............................................................................................	25	6	0.33	2	0	2	0	0	0	0	0	0	0	0
............................................................CATGGGGTATGCATCCTTGATGG.................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............TGAACCGT-GCCTCCCTGAGCTG................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTAAA.............................................................................................	27	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...................................................TATTCTTGGCATGGGGTATGCATCC........................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................................................ATGGGGTATGCATCCTTGATGGACT..............................................................................	25	3	0.33	1	0	0	1	0	0	0	0	0	0	0
..................................................CTATTCTTGGCATGGGGTATGCATCC........................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................TTT---TGACCATCACGATGGGTG...	21	6	0.33	2	0	2	0	0	0	0	0	0	0	0
............................................................CATGGGGTATGCATCCTTGATGGACTT.............................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGA................................................................................................	24	6	0.33	2	0	1	1	0	0	0	0	0	0	0
...........................................ATATAGTCTATTCTTGGCATGGGG.................................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCCTTG.....................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
............................................................CATGGGGTATGCATCCTTGATGGAA...............................................................................	25	3	0.33	1	0	0	0	0	1	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGATT..................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGGTGAAA	28	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGGTGAA.	27	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..................CGT-GCCTCCCTGAGCTGGTC.............................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................TAGTCTATTCTTGGCATGGGGTATGCA...........................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..........................................................GGCATGGGGTATGCATCCTTGATGGA................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGAA...................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TCTTCTTTT---TGACCATCACGATGGG.....	25	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGATGT.................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCTTGT....................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................TGGCATGGGGTATGCATCCTTGAAA..................................................................................	25	3	0.33	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................TCTTTT---TGACCATCACGATGGG.....	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................TTT---TGACCATCACGATGGGT....	20	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................TT---TGACCATCACGATGGGTG...	20	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGGG.....	23	6	0.33	2	0	2	0	0	0	0	0	0	0	0
............................................................CATGGGGTATGCATCCTTGATGGA................................................................................	24	3	0.33	1	0	0	0	0	1	0	0	0	0	0
..........................................................GGCATGGGGTATGCATCCTTG.....................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTGTCTG.............................................................	23	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...................................................................TATGCATCCTTGATGGACTTCGC..........................................................................	23	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................T---TGACCATCACGATGGGTGA..	20	7	0.29	2	0	1	1	0	0	0	0	0	0	0
.....................................................................................TTCGCGTTTATCTGTCTGAAGTCCA......................................................	25	7	0.29	2	0	2	0	0	0	0	0	0	0	0
................................................................GGGTATGCATCCTTGATGGACTT.............................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTATGC............................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTATG.............................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..............................................................TGGGGTATGCATCCTTGATGGACTTC............................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..........TAATGAACCGT-GCCTCCCTGAG...................................................................................................................................	22	8	0.25	2	0	2	0	0	0	0	0	0	0	0
..............................................................TGGGGTATGCATCCTTGATGGACTTCG...........................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGA..................................................................................................................	21	4	0.25	1	0	0	0	0	0	0	0	1	0	0
...AAGCTACTAATGAACCGT-GCCTCCC.......................................................................................................................................	25	8	0.25	2	0	2	0	0	0	0	0	0	0	0
...AAGCTACTAATGAACCGT-GC............................................................................................................................................	20	8	0.25	2	0	2	0	0	0	0	0	0	0	0
..........................CCCTGAGCTGGTCCAAAATATAGTC.................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAGA..................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................................GGGGTATGCATCCTTGATGGACTTCG...........................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...AAGCTACTAATGAACCGT-GCC...........................................................................................................................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.................................................................GGTATGCATCCTTGATGGACTTCGCGT........................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTAT..............................................................................................	25	4	0.25	1	0	0	1	0	0	0	0	0	0	0
...............................................................GGGGTATGCATCCTTGATGG.................................................................................	20	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..TAAGCTACTAATGAACCGT-GCCTCCCTG.....................................................................................................................................	28	8	0.25	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................CCACTTTCCCGTCTTCTTTT---TGACCA...............	26	8	0.25	2	0	2	0	0	0	0	0	0	0	0
..............................................................TGGGGTATGCATCCTTGATGGA................................................................................	22	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAG...................................................................................................................	20	4	0.25	1	0	1	0	0	0	0	0	0	0	0
TCTAAGCTACTAATGAACCGT-GCCTCCC.......................................................................................................................................	28	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAGAA.................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.CTAAGCTACTAATGAACCGT-GC............................................................................................................................................	22	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.............................TGAGCTGGTCCAAAATATAGTC.................................................................................................................	22	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAATATAG...................................................................................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.................................................TCTATTCTTGGCATGGGGTATG.............................................................................................	22	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATG....................................................................................................	19	9	0.22	2	0	1	1	0	0	0	0	0	0	0
.......................................CAAAATATAGTCTATTCTTGG........................................................................................................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCAC...........	24	9	0.22	2	0	0	2	0	0	0	0	0	0	0
..........................................................................CCTTGATGGACTTCGCGTTTATC...................................................................	23	9	0.22	2	0	2	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGAC.................................................................................................	23	9	0.22	2	0	0	2	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCAA.................................................................	26	9	0.22	2	0	2	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGA..................................................................................................	22	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................TTCCCGTCTTCTTTT---TGACCATCACG..........	26	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCAA...........	24	9	0.22	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................CCGTCTTCTTTT---TGACCATCACGA.........	24	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.......................................................CTTGGCATGGGGTATGCATCC........................................................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATCCT.......................................................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................TCCCTGAGCTGGTCCAAAAT.......................................................................................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCA...........................................................................................	19	5	0.20	1	0	0	0	0	1	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCCC.......................................................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0
...........................CCTGAGCTGGTCCAAAAT.......................................................................................................................	18	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.....................................................TTCTTGGCATGGGGTATGCATC.........................................................................................	22	5	0.20	1	0	0	1	0	0	0	0	0	0	0
.....................................................TTCTTGGCATGGGGTATGCAA..........................................................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................TTGGCATGGGGTATGCATC.........................................................................................	19	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................CTTTT---TGACCATCACGATGGGTGAAC	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TCTTCTTTT---TGACCATCACGATGGGTG...	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................CTTTT---TGACCATCACGATGGGTGAA.	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTTT---TGACCATCACGATGGGT....	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGTTAA.............................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CTTCTTTT---TGACCATCACGATGGG.....	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTTT---TGACCATCACGATGGGTGAA.	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................CTATTCTTGGCATGGGGT................................................................................................	18	6	0.17	1	0	0	1	0	0	0	0	0	0	0
..........................................................................CCTTGATGGACTTCGCGTTTATCTGT................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TCCTTGATGGACTTCGCGTTTATCTGTCT..............................................................	29	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.............................................ATAGTCTATTCTTGGCATGGGGC................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................CTTTT---TGACCATCACGATG.......	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................T---TGACCATCACGATGGGTGAAC	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................AAATATAGTCTATTCTTGGCATGGGG.................................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGATGG......	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTTT---TGACCATCACGATGGG.....	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTT...............................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................GACCATCACGATGGGTGAAC	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TCTTCTTTT---TGACCATCACGATGGGTGAA.	29	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................TTT---TGACCATCACGATGGGTGAA.	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CTTCTTTT---TGACCATCACGATGG......	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

TCTAAGCTACTAATGAACCGT-GCCTCCCTGAGTTGGTCCAAAATATAGTCTATTCTTGGCATGGGGTATGCATCTTTGATGGACTTCGCGTTTATCTGTCTGAAGTCCACGCATAATCTCCACTTTCCCGTCTTCTTTT---TGACCATCACGATGGGTGAGC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................TCGCGTTTATCTGTCTGAAGTCCACGCA..................................................	28	20	0.85	17	0	17	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTGTCTGAAG..........................................................	26	20	0.55	11	0	11	0	0	0	0
......................................................................................TCGCGTTTATCTGTCTGAAGTCCACG....................................................	26	20	0.50	10	6	4	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAATCTCCACT.......................................	24	20	0.50	10	0	10	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAATCTCCAC........................................	23	20	0.40	8	0	8	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGA.........	26	20	0.25	5	0	5	0	0	0	0
......................................................................................TCGCGTTTATCTGTCTGAAGTCCACGC...................................................	27	20	0.20	4	1	3	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTGTC...............................................................	21	20	0.15	3	0	3	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAATCTCCACTTTCC...................................	28	20	0.15	3	0	3	0	0	0	0
.........................TCCCTGAGTTGGTCCAAAATATAGTC.................................................................................................................	26	7	0.14	1	0	1	0	0	0	0
.............................TGAGTTGGTCCAAAATATAGTCTAT..............................................................................................................	25	7	0.14	1	0	1	0	0	0	0
...............................AGTTGGTCCAAAATATAGTCTATTCTT..........................................................................................................	27	7	0.14	1	0	1	0	0	0	0
..TAAGCTACTAATGAACCGT-GCCTCCC.......................................................................................................................................	26	16	0.13	2	0	2	0	0	0	0
...................................................TATTCTTGGCATGGGGTATGC............................................................................................	21	9	0.11	1	0	1	0	0	0	0
......................................................................................TCGCGTTTATCTGTCTGAAGTCCAC.....................................................	25	20	0.10	2	0	1	1	0	0	0
...................................................................................................................................TCTTCTTTT---TGACCATCACGATG.......	23	20	0.10	2	0	1	1	0	0	0
...................................................................................................TCTGAAGTCCACGCATAATCTCCACTT......................................	27	20	0.10	2	0	2	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGT................................................................................................	24	20	0.10	2	0	1	1	0	0	0
...................................................................................................TCTGAAGTCCACGCATAATCTCCACT.......................................	26	20	0.10	2	1	1	0	0	0	0
..................................................................................................................TAATCTCCACTTTCCCGTCTTCTTTT---.....................	26	20	0.10	2	0	2	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGGCA......................................................................................................	28	20	0.10	2	0	2	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTGTCTGAAGAA........................................................	28	20	0.10	2	0	2	0	0	0	0
......................................................TCTTGGCATGGGGTATGCAT..........................................................................................	20	10	0.10	1	0	1	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTTTCCCGTC...............................	27	20	0.10	2	0	2	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTTTCCCGTCT..............................	28	20	0.10	2	0	2	0	0	0	0
............................................TATAGTCTATTCTTGGCATGG...................................................................................................	21	20	0.10	2	2	0	0	0	0	0
......................................................TCTTGGCATGGGGTATGCATCAAA......................................................................................	24	11	0.09	1	0	1	0	0	0	0
.....................................................................................................................TCTCCACTTTCCCGTCTTCTT..........................	21	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGATG.......	28	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................TTCTTTT---TGACCATCACGAT........	20	20	0.05	1	0	0	0	0	1	0
.................................................................................GGACTTCGCGTTTATCTGTCTGAAGT.........................................................	26	20	0.05	1	0	1	0	0	0	0
...............................................................................................TCTGTCTGAAGTCCACGCATAATCTC...........................................	26	20	0.05	1	0	1	0	0	0	0
......................................................................................TCGCGTTTATCTGTCTGAAGTCCA......................................................	24	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................TTCCCGTCTTCTTTT---TGACCATCAC...........	25	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................TTCCCGTCTTCTTTT---TGACCATCACG..........	26	20	0.05	1	0	0	1	0	0	0
................................................................................................................................CCGTCTTCTTTT---TGACCATCACGA.........	24	20	0.05	1	0	1	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTTTCCCGT................................	26	20	0.05	1	0	1	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGGTA...............................................................................................	25	20	0.05	1	0	1	0	0	0	0
............................................................................................TTATCTGTCTGAAGTCCACGCATAATC.............................................	27	20	0.05	1	0	1	0	0	0	0
..................................................................................GACTTCGCGTTTATCTGTCTGAAG..........................................................	24	20	0.05	1	0	1	0	0	0	0
........................................................................................................................CCACTTTCCCGTCTTCTTTT---TGAC.................	24	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACG..........	25	20	0.05	1	0	1	0	0	0	0
................................................................................TGGACTTCGCGTTTATCTG.................................................................	19	20	0.05	1	0	1	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTTTCCC..................................	24	20	0.05	1	0	1	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTTTCCCG.................................	25	20	0.05	1	0	1	0	0	0	0
.......................................................................................CGCGTTTATCTGTCTGAAGTCCAC.....................................................	24	20	0.05	1	0	1	0	0	0	0
...............................................................................ATGGACTTCGCGTTTATCTG.................................................................	20	20	0.05	1	0	1	0	0	0	0
..................................TGGTCCAAAATATAGTCTAT..............................................................................................................	20	20	0.05	1	0	1	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAATCTCCACTT......................................	25	20	0.05	1	0	0	1	0	0	0
...................................................................................................................AATCTCCACTTTCCCGTCTTCT...........................	22	20	0.05	1	0	1	0	0	0	0
...........................................................................................................CCACGCATAATCTCCACTTTCCCG.................................	24	20	0.05	1	0	1	0	0	0	0
...............................................................................................................................CCCGTCTTCTTTT---TGACC................	18	20	0.05	1	0	1	0	0	0	0
..........................................................................................................TCCACGCATAATCTCCACTT......................................	20	20	0.05	1	0	1	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGGCT......................................................................................................	28	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................TCCCGTCTTCTTTT---TGACCATCACGAT........	27	20	0.05	1	0	1	0	0	0	0
.......................................................................................CGCGTTTATCTGTCTGAAGTCCA......................................................	23	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................CGTCTTCTTTT---TGACCATCACGA.........	23	20	0.05	1	0	1	0	0	0	0
............................................TATAGTCTATTCTTGGCATGGGG.................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.................................................................................................................ATAATCTCCACTTTCCCGTCTTCTTTT---.....................	27	20	0.05	1	0	1	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAATCTCCACTTTCCC..................................	29	20	0.05	1	0	1	0	0	0	0
............................................................................................TTATCTGTCTGAAGTCCACGCATAATCT............................................	28	20	0.05	1	1	0	0	0	0	0
..................................................................................................GTCTGAAGTCCACGCATAATCTCCACTT......................................	28	20	0.05	1	0	1	0	0	0	0
..................................................................................................................TAATCTCCACTTTCCCGTCTTCTT..........................	24	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................CACTTTCCCGTCTTCTTTT---TGACCA...............	25	20	0.05	1	0	1	0	0	0	0
..................................TGGTCCAAAATATAGTCTATTCTTGGC.......................................................................................................	27	20	0.05	1	0	1	0	0	0	0
......................................................................................................GAAGTCCACGCATAATCTCCAC........................................	22	20	0.05	1	0	1	0	0	0	0
.......................................................................................CGCGTTTATCTGTCTGAAGTCCACGCA..................................................	27	20	0.05	1	0	1	0	0	0	0

droAna3

TCCAGGCTGCTGAAAAATTTT-GCCTCTCTCAATTGTTCCAAAATGAAGTTTATTCTTGGCATAGGGTACGCATCTTTCACTGACTTTGCGTTTATTTGTCGGAAATCCACGCACATTCTCCATTGTCCCGTCTTTTTCT---TCACCATGACAATGGGTGAGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................................................................................TCCACGCACATTCTCCATTGTCCCGTC...............................	27	6	0.67	4	3	1	0	0	0	0
.......TGCTGAAAAATTTT-GCCTCTCTCAATTG................................................................................................................................	28	2	0.50	1	1	0	0	0	0	0
.............................................................................TCACTGACTTTGCGTTTATTTGTCGG.............................................................	26	16	0.25	4	0	4	0	0	0	0
.....................................................................................................................................TTTTTCT---TCACCATGACAATGGGTGA..	26	20	0.20	4	4	0	0	0	0	0
.............................................................................................TATTTGTCGGAAATCCACGCACATTC.............................................	26	20	0.15	3	2	1	0	0	0	0
............................................................................................................CACGCACATTCTCCATTGTCCCGTCTT.............................	27	7	0.14	1	1	0	0	0	0	0
..................................................................................................................CATTCTCCATTGTCCCGTCTTTTTCT---T....................	27	7	0.14	1	1	0	0	0	0	0
..............................................................TAGGGTACGCATCTTTCACTGACTTTG...........................................................................	27	14	0.14	2	2	0	0	0	0	0
............................................................................................................CACGCACATTCTCCATTGTCCCGTCT..............................	26	7	0.14	1	1	0	0	0	0	0
..............................................................................................................................TCCCGTCTTTTTCT---TCACCATGAC...........	24	8	0.13	1	1	0	0	0	0	0
............................................................................TTCACTGACTTTGCGTTTATTTGTCGG.............................................................	27	16	0.13	2	1	1	0	0	0	0
..............................................................................................................................TCCCGTCTTTTTCT---TCACCATGACAA.........	26	8	0.13	1	1	0	0	0	0	0
.........................................AAATGAAGTTTATTCTTGGCATAGGG.................................................................................................	26	10	0.10	1	1	0	0	0	0	0
.........................................................................................................................................TCT---TCACCATGACAATGGGTGAGC	24	20	0.10	2	2	0	0	0	0	0
..........................................AATGAAGTTTATTCTTGGCATAGGG.................................................................................................	25	10	0.10	1	0	0	1	0	0	0
.............................................................................TCACTGACTTTGCGTTTATTTGTCG..............................................................	25	20	0.10	2	1	0	0	0	1	0
..................................................................................................................................GTCTTTTTCT---TCACCATGACAATG.......	24	20	0.10	2	2	0	0	0	0	0
............................................................................TTCACTGACTTTGCGTTTATTTGTCG..............................................................	26	20	0.10	2	2	0	0	0	0	0
TCCAGGCTGCTGAAAAATTTT-GCC...........................................................................................................................................	24	11	0.09	1	0	1	0	0	0	0
............................................TGAAGTTTATTCTTGGCATAGGGTACG.............................................................................................	27	12	0.08	1	1	0	0	0	0	0
...............................................................AGGGTACGCATCTTTCACTGACTTT............................................................................	25	14	0.07	1	1	0	0	0	0	0
..............................................................TAGGGTACGCATCTTTCACTGACTTT............................................................................	26	14	0.07	1	1	0	0	0	0	0
...........................................................................TTTCACTGACTTTGCGTTTATTTGTCGG.............................................................	28	15	0.07	1	0	1	0	0	0	0
..............................................................................CACTGACTTTGCGTTTATTTGTCGG.............................................................	25	16	0.06	1	0	1	0	0	0	0
.................................................TTTATTCTTGGCATAGGGTACGCATC.........................................................................................	26	18	0.06	1	0	1	0	0	0	0
...................................................TATTCTTGGCATAGGGTACGCATCT........................................................................................	25	18	0.06	1	0	1	0	0	0	0
....................................................................................................................................CTTTTTCT---TCACCATGACAATGGGTG...	26	20	0.05	1	0	1	0	0	0	0
.....................................................TTCTTGGCATAGGGTACGCAT..........................................................................................	21	20	0.05	1	0	1	0	0	0	0
.............................................................................................TATTTGTCGGAAATCCACGCACATT..............................................	25	20	0.05	1	1	0	0	0	0	0
.................................................................................................TGTCGGAAATCCACGCACATTCTCC..........................................	25	20	0.05	1	1	0	0	0	0	0
..................................................TTATTCTTGGCATAGGGTACGC............................................................................................	22	20	0.05	1	0	1	0	0	0	0
.............................................................................TCACTGACTTTGCGTTTATTTGTCGTT............................................................	27	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................CTTTTTCT---TCACCATGACAATGGG.....	24	20	0.05	1	1	0	0	0	0	0
................................................................................................TTGTCGGAAATCCACGCACATTCTCC..........................................	26	20	0.05	1	0	1	0	0	0	0
...........................................................GCATAGGGTACGCATCTTT......................................................................................	19	20	0.05	1	1	0	0	0	0	0
....................................................ATTCTTGGCATAGGGTAC..............................................................................................	18	20	0.05	1	0	1	0	0	0	0
.............................................................................................TATTTGTCGGAAATCCACGCACATTCTC...........................................	28	20	0.05	1	1	0	0	0	0	0
...................................................................TACGCATCTTTCACTGACTTTGCGTT.......................................................................	26	20	0.05	1	1	0	0	0	0	0
...................................................TATTCTTGGCATAGGGTACGC............................................................................................	21	20	0.05	1	0	1	0	0	0	0
...................................................................TACGCATCTTTCACTGACTTT............................................................................	21	20	0.05	1	1	0	0	0	0	0
...........................................................................TTTCACTGACTTTGCGTTTATTTGT................................................................	25	20	0.05	1	0	1	0	0	0	0
.............................................................................................TATTTGTCGGAAATCCACGCA..................................................	21	20	0.05	1	1	0	0	0	0	0
................................................................................................TTGTCGGAAATCCACGCACATTCTCCAT........................................	28	20	0.05	1	1	0	0	0	0	0
.................................................................GGTACGCATCTTTCACTGACTTTG...........................................................................	24	20	0.05	1	1	0	0	0	0	0
................................................................................................................................CCGTCTTTTTCT---TCACCATGACAATGGGT....	29	20	0.05	1	1	0	0	0	0	0
...................................................................................................TCGGAAATCCACGCACATTCTCCATT.......................................	26	20	0.05	1	0	1	0	0	0	0
................................................................GGGTACGCATCTTTCACTGACTTTGC..........................................................................	26	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................TTTCT---TCACCATGACAATGGGTGA..	24	20	0.05	1	1	0	0	0	0	0
.............................................................................................TATTTGTCGGAAATCCACGCACA................................................	23	20	0.05	1	0	1	0	0	0	0
...................................................................................ACTTTGCGTTTATTTGTCGGAAA..........................................................	23	20	0.05	1	1	0	0	0	0	0
.................................................TTTATTCTTGGCATAGGGTAC..............................................................................................	21	20	0.05	1	0	1	0	0	0	0

droBip1

TCGAGGCTGCTGAAGAATCTG-GCCTCTCTCAGCTGTTCTAAAATGAAGTGTATCCGTGGCATTGGGTACGCATCCTTTATTGATTTTGCGTTGATCTGTCGAAAGTCTACGCACATCCTCCATTGACCCGTCTTCTTCT---TCACCATCACAATGGGTGAAC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TCCAAGGTCGAGATGTATTTG-GCGTTTCTCAGACGCTCTAAAATGTGGTTAATCCGCGGAAGCGGATATGCATCCGGGATGGATTTGTCGTTTAGTTGTCGGTAGTCGACACACATGCGCCATTGGCCGGTTTTCTTAC---GCACCAGGACTAAGGGGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCCAGGCTACTTATATATTTT-GCCTCTTTTAACTGATCTAGAATGTAGTTAATCATAGGCATTGGGTACGCATCCTTTATCGACTTCCCGTTTATCTGCCGCAAAGCTACGCACAGACTCCATTTTCCCGTCTTCTTCT---TCACCATGACGATTGAAG-GC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCGAGGCTGCTAATATATTTTAGCTTCTCGGAGTTGGTCCAGGATGTAGTTGATCATCGGCATTGGATATGCATCCTTCACGGATTTTGCGTTGATCTGCCTGAAATCCACACAGAGCCTCCATTTGCCGGTCTTCTTTC---TCACCATGACTATTGGTGAGC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCTAGACTGCTTATATATTTC-GCCTCTCTGAGTTGGTCCAGGATATAGTTGATTCGTGGCATCGGGTAGGCATCTTTTATGGACTTCGCGTTTATTTGTCTGAAATCCACGCATAGCCTCCACTTGCCCGTTTTCTTTT---TCACCATCACGATGGGCGAGC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TCCAAGCTGCTTATGTACCGT-GCCTCTCTCAGCTGGTCGAGGATATAATTTATTCGAGGCATCGGGTAGGCATCCTTTATCGATTTGGCGTTGATCTGCCTGAAGTCGACGCACAGTCTCCACTTGCCCGTCTTCTTCC---TAACCATCACGATGGGAGAGC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCAAGGCTGCTTATATATGTC-GCCTCTCGTAGCTGTTCGAGAATGTGGTTCATTCTTGGTAGTGGGTAGGCGTCTTTTTCCGATCTGCTATTCAGCTGCCTAAAGTCTACACATAGACGCCATTTTCCCGTCTTCTTTT---TCACCATCACTATCGGGGCGC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TCGAGCGTCGACATGTACTTG-GCATGGCGCAGACGCTCCAAGATGTGCGTTATCCTTGGCAGCGGGTATGCATCTGGAATAGAATGGGCATTTAGTTGTCGAAAATCTACACATAGTCGCATCTCTCCAGATTTCTTGC---CCACGAGTACAATAGGGGCGC	Size	Hit Count	Total Norm	Total
No Reads

dm3

TCTAAAATGCTTATATACATC-GCCTCCTTTAGCTGATCCAGGATGTAATTTATCATCGGCATCGGGTACGCATCCTTCACGGACCTTGCGTTTATCTGCCGGAAATCCACGCATAATCTCCATTGTCCTGTTTTCTTTC---TCACCATCACTATCGGTGAGC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................TTTATCATCGGCATCGGGTACGCATC.........................................................................................	26	1	520.00	520	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	16	4	0	0	0	2	0	0	1	0	0	0	0	0	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	5	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	1	0	2	0	27	0	33	2	19	34	166	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	5	1	2	0	0	0	0	0	0	31	40	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	35	11	13	0	0	0	0	0	0
.........................TCCTTTAGCTGATCCAGGATGTAATT.................................................................................................................	26	1	386.00	386	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	5	2	3	2	0	0	6	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	0	1	5	1	0	0	0	8	3	5	1	8	0	2	0	0	0	2	0	0	0	0	0	1	0	1	0	59	0	61	2	32	58	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	3	2	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	0	0	0	0	0	0
...................................................TATCATCGGCATCGGGTACGCATC.........................................................................................	24	1	288.00	288	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	5	11	5	0	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	2	1	1	0	0	0	0	3	0	3	0	7	0	22	0	0	0	0	0	3	0	9	0	47	0	21	13	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	1	9	0	0	0	0	0	0	15	14	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	13	5	6	0	0	0	0	0	0
.....................................................................................................................................TTCTTTC---TCACCATCACTATCGGT....	24	12	262.75	3153	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	8	0	0	0	0	0	0	0	0	0	0	0	0	8	1	7	0	28	8	26	1	14	11	10	0	5	3	1	0	15	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	5	0	0	3	0	2	0	1	0	0	0	0	2	3	7	19	0	9	12	17	18	8	35	2	18	30	34	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	42	2	19	0	26	3	0	1	0	7	1	0	0	0	0	4	9	0	0	0	0	0	0	0	0	0	208	3	6	6	360	5	442	11	301	377	793	8	0	0	0	0	0	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	7	15	2	2	0	0	0	0	0	0	20	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	21	4	7	0	0	0	0	0	0
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.............TATACATC-GCCTCCTTTAGCTGATCCA...........................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................AGCTGATCCAGGATGTAATTTATCATC..........................................................................................................	27	3	3.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TGCTTATATACATC-GCCTCCTTTAGCT.................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CTTTAGCTGATCCAGGATGTAATTTA...............................................................................................................	26	3	3.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CACGCATAATCTCCATTGTCCTGTTT..............................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TCTCCATTGTCCTGTTTTCTTTC---TCA..................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCCATTGTCCTGTTTTCTTTC---TCACC................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TCATCGGCATCGGGTACGCATCCTTCAC...................................................................................	28	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................ATCTCCATTGTCCTGTTTTCTTTC---TC...................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TCCAGACTGCTTATGTATTTC-GCCTCCCTTAATTGATCCAGAATGTAGTTGATCATTGGCATCGGGTACGCGTCCTTCACGGACTTTGCGTTTATTTGGCGGAAATCCACACACAAACGCCACTGACCCGTCTTCTTTT---TCACCATCACTATGGGAGAGC

Size

Hit Count

Total Norm

Total

M023
Head

M024
Male-body

M025
Embryo

M053
Female-body

O001
Testis

O002
Head

SRR553485
Ovary

SRR553486
Ovary

SRR553487
Ovary

SRR553488
Ovary

SRR618934
Ovary

V044
Embryo

SRR902008
Ovary

SRR902009
Testis

SRR1275487
Male larvae

SRR1275485
Male prepupae

SRR1275483
Male prepupae

No Reads

droSec2

TCTATACTGCTTATGTACTTC-GCCTCCTTTAGCTGGTCCAGGATGTAATTTATCATCGGCATCGTGTACGCATCCTTTACGGACCTTGCGTTTATCTGCCGGAAATCCACGCACAGTCTCCATTGCCCTGTTTTCTTTC---TCACCATCACTATCGGTGAGC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........TATGTACTTC-GCCTCCTTTAGCTG................................................................................................................................	24	17	4.35	74	61	0	13	0
.................................................................................GGACCTTGCGTTTATCTGCCGGAA...........................................................	24	20	3.70	74	74	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	25	17	3.53	60	53	1	3	3
.................................................................................GGACCTTGCGTTTATCTGCCGGAAA..........................................................	25	20	2.80	56	52	0	4	0
...........TATGTACTTC-GCCTCCTTTAGCT.................................................................................................................................	23	17	2.24	38	35	0	3	0
.................................................................................GGACCTTGCGTTTATCTGCCGGAAATC........................................................	27	20	1.95	39	38	0	0	1
...........TATGTACTTC-GCCTCCTTTAGC..................................................................................................................................	22	17	1.06	18	17	0	1	0
.....................................TCCAGGATGTAATTTATCATCGGCATC....................................................................................................	27	20	1.05	21	20	0	1	0
.................................................................................GGACCTTGCGTTTATCTGCCGG.............................................................	22	20	1.00	20	20	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGGT..............................................................................................................................	26	17	0.71	12	12	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGT...............................................................................................................................	25	17	0.53	9	9	0	0	0
.................................................................................GGACCTTGCGTTTATCTGCCGGAAAT.........................................................	26	20	0.50	10	10	0	0	0
...................................................TATCATCGGCATCGTGTACGCATCCTT......................................................................................	27	8	0.50	4	4	0	0	0
.................................................................................................................................TGTTTTCTTTC---TCACCATCACTATC.......	25	13	0.46	6	6	0	0	0
.........................................................................TCCTTTACGGACCTTGCGTTTATCTGC................................................................	27	13	0.46	6	4	0	2	0
.......TGCTTATGTACTTC-GCCTCCTTTAGC..................................................................................................................................	26	17	0.41	7	7	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGGTC.............................................................................................................................	27	15	0.40	6	4	0	2	0
..................................................................................GACCTTGCGTTTATCTGCCGGAA...........................................................	23	20	0.40	8	8	0	0	0
.................................................TTTATCATCGGCATCGTGTACGCATC.........................................................................................	26	8	0.38	3	2	0	1	0
...........TATGTACTTC-GCCTCCTTTAGCTGGA..............................................................................................................................	26	17	0.35	6	6	0	0	0
.....................................................TCATCGGCATCGTGTACGCATCCTT......................................................................................	25	9	0.33	3	3	0	0	0
.............................................................................................TATCTGCCGGAAATCCACGCACAGTC.............................................	26	20	0.30	6	6	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	24	17	0.29	5	5	0	0	0
.................................................TTTATCATCGGCATCGTGTACGCA...........................................................................................	24	8	0.25	2	1	0	1	0
..............................................................................TACGGACCTTGCGTTTATCTGCCGGA............................................................	26	16	0.25	4	2	0	2	0
..................................................................................GACCTTGCGTTTATCTGCCGGAAA..........................................................	24	20	0.25	5	5	0	0	0
............ATGTACTTC-GCCTCCTTTAGCT.................................................................................................................................	22	17	0.24	4	4	0	0	0
.................................................................................................................................TGTTTTCTTTC---TCACCATCACTATCGG.....	27	13	0.23	3	3	0	0	0
..TATACTGCTTATGTACTTC-GCCTCCTT......................................................................................................................................	27	9	0.22	2	2	0	0	0
......................................CCAGGATGTAATTTATCATCGGCATC....................................................................................................	26	20	0.20	4	4	0	0	0
...........................................................................................................CCACGCACAGTCTCCATTGCCCTGTT...............................	26	5	0.20	1	1	0	0	0
.............................................................................TTACGGACCTTGCGTTTATCTGCCG..............................................................	25	16	0.19	3	0	0	3	0
..............................................................................................................................CCCTGTTTTCTTTC---TCACCATCAC...........	24	17	0.18	3	3	0	0	0
.................................................................................GGACCTTGCGTTTATCTGCCG..............................................................	21	20	0.15	3	3	0	0	0
..................................................................................GACCTTGCGTTTATCTGCCGGAAATC........................................................	26	20	0.15	3	3	0	0	0
.................................................................................................TGCCGGAAATCCACGCACAGTCTC...........................................	24	20	0.15	3	2	0	1	0
.......................................................................................TGCGTTTATCTGCCGGAAATCCACGCAC.................................................	28	20	0.15	3	3	0	0	0
.................................................TTTATCATCGGCATCGTGTACG.............................................................................................	22	8	0.13	1	1	0	0	0
..............................................TAATTTATCATCGGCATCGTGTACGC............................................................................................	26	8	0.13	1	0	0	1	0
.................................................TTTATCATCGGCATCGTGTACGC............................................................................................	23	8	0.13	1	0	0	1	0
..................................................TTATCATCGGCATCGTGTACGCATCCTT......................................................................................	28	8	0.13	1	1	0	0	0
.............................................GTAATTTATCATCGGCATCGTGTA...............................................................................................	24	8	0.13	1	1	0	0	0
................................................ATTTATCATCGGCATCGTGTACGCATC.........................................................................................	27	8	0.13	1	1	0	0	0
............................................TGTAATTTATCATCGGCATCGTGT................................................................................................	24	8	0.13	1	1	0	0	0
............................................TGTAATTTATCATCGGCATCGTGTACGCA...........................................................................................	29	8	0.13	1	1	0	0	0
.................................................TTTATCATCGGCATCGTGTACGCATCCTT......................................................................................	29	8	0.13	1	1	0	0	0
............................................TGTAATTTATCATCGGCATCGTG.................................................................................................	23	8	0.13	1	1	0	0	0
..................................................TTATCATCGGCATCGTGTACGCATCC........................................................................................	26	8	0.13	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTG................................................................................................................................	23	17	0.12	2	2	0	0	0
.......TGCTTATGTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	29	17	0.12	2	2	0	0	0
...........TATGTACTTC-GCCTCCTT......................................................................................................................................	18	17	0.12	2	2	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTA................................................................................................................................	24	17	0.12	2	1	0	1	0
..TATACTGCTTATGTACTTC-GCCTCC........................................................................................................................................	25	9	0.11	1	1	0	0	0
....TACTGCTTATGTACTTC-GCCTCC........................................................................................................................................	23	9	0.11	1	1	0	0	0
....TACTGCTTATGTACTTC-GCCTCCT.......................................................................................................................................	24	9	0.11	1	1	0	0	0
.....................................................TCATCGGCATCGTGTACGCATCCTTT.....................................................................................	26	9	0.11	1	1	0	0	0
...............................................................CGTGTACGCATCCTTTACGGACC..............................................................................	23	9	0.11	1	1	0	0	0
....................................................ATCATCGGCATCGTGTACGCATC.........................................................................................	23	9	0.11	1	1	0	0	0
....................................................ATCATCGGCATCGTGTACGCATCCT.......................................................................................	25	9	0.11	1	0	0	1	0
..............................................................TCGTGTACGCATCCTTTACGGACCT.............................................................................	25	9	0.11	1	1	0	0	0
.....................................................TCATCGGCATCGTGTACGCATCCTTTA....................................................................................	27	9	0.11	1	1	0	0	0
TCTATACTGCTTATGTACTTC-GCCTCC........................................................................................................................................	27	9	0.11	1	1	0	0	0
....................................................ATCATCGGCATCGTGTACGCATCC........................................................................................	24	9	0.11	1	0	0	1	0
.............................................................................................TATCTGCCGGAAATCCACGCACAGTCTC...........................................	28	20	0.10	2	2	0	0	0
......................................................................................TTGCGTTTATCTGCCGGAAATC........................................................	22	20	0.10	2	2	0	0	0
............................................................................................................CACGCACAGTCTCCATTGCCC...................................	21	20	0.10	2	2	0	0	0
.........................TCCTTTAGCTGGTCCAGGATGTAATTT................................................................................................................	27	10	0.10	1	1	0	0	0
...........................................................................................TTTATCTGCCGGAAATCCACGC...................................................	22	20	0.10	2	2	0	0	0
......................................................................................TTGCGTTTATCTGCCGGAAATCC.......................................................	23	20	0.10	2	0	0	2	0
.................................................................................GGACCTTGCGTTTATCTGCC...............................................................	20	20	0.10	2	2	0	0	0
....................................................................................................CGGAAATCCACGCACAGTCTCCATTG......................................	26	20	0.10	2	2	0	0	0
.........................TCCTTTAGCTGGTCCAGGATGTAATT.................................................................................................................	26	11	0.09	1	0	0	1	0
.......................CCTCCTTTAGCTGGTCCAGGATGTAAT..................................................................................................................	27	11	0.09	1	1	0	0	0
....................C-GCCTCCTTTAGCTGGTCCAGGATG......................................................................................................................	25	11	0.09	1	1	0	0	0
.........................TCCTTTAGCTGGTCCAGGATGT.....................................................................................................................	22	11	0.09	1	0	0	1	0
...................................................................TACGCATCCTTTACGGACCTTGT..........................................................................	23	12	0.08	1	0	0	1	0
.....................................................................................................................................TTCTTTC---TCACCATCACTATCGGTGA..	26	13	0.08	1	1	0	0	0
.................................................................................................................................TGTTTTCTTTC---TCACCATCACTATCGT.....	27	13	0.08	1	1	0	0	0
..................TTC-GCCTCCTTTAGCTGGTCCAGGA........................................................................................................................	25	14	0.07	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGGTCC............................................................................................................................	28	14	0.07	1	1	0	0	0
.............TGTACTTC-GCCTCCTTTAGCTGGTCC............................................................................................................................	26	14	0.07	1	1	0	0	0
...............TACTTC-GCCTCCTTTAGCTGGTCCAGGA........................................................................................................................	28	14	0.07	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGGTC.............................................................................................................................	26	15	0.07	1	1	0	0	0
..............................................................................TACGGACCTTGCGTTTATCTGCCGGAAA..........................................................	28	16	0.06	1	1	0	0	0
............................................................................TTTACGGACCTTGCGTTTATCTGCCGGA............................................................	28	16	0.06	1	1	0	0	0
..........TTATGTACTTC-GCCTCCTTTAGCTGGT..............................................................................................................................	27	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGAC..............................................................................................................................	26	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTTT...............................................................................................................................	25	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAG...................................................................................................................................	20	17	0.06	1	0	0	1	0
..............GTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	22	17	0.06	1	1	0	0	0
...............TACTTC-GCCTCCTTTAGCT.................................................................................................................................	19	17	0.06	1	1	0	0	0
......CTGCTTATGTACTTC-GCCTCCTTTAGC..................................................................................................................................	27	17	0.06	1	1	0	0	0
..............................................................................................................................CCCTGTTTTCTTTC---TCACCATCACT..........	25	17	0.06	1	1	0	0	0
.......................................................................................................................TCCATTGCCCTGTTTTCTTTC---TCACC................	26	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGGC..............................................................................................................................	26	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGGA..............................................................................................................................	25	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCC.................................................................................................................................	23	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGGT..............................................................................................................................	25	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGC..................................................................................................................................	21	17	0.06	1	1	0	0	0
.......TGCTTATGTACTTC-GCCTCCTTT.....................................................................................................................................	23	17	0.06	1	1	0	0	0
..........TTATGTACTTC-GCCTCCTTTAGCT.................................................................................................................................	24	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGC...............................................................................................................................	25	17	0.06	1	1	0	0	0
.............TGTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	23	17	0.06	1	1	0	0	0
..........................................................................................................................ATTGCCCTGTTTTCTTTC---TCACC................	23	17	0.06	1	1	0	0	0
.......................................................................................................................TCCATTGCCCTGTTTTCTTTC---TCACCA...............	27	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTGA...............................................................................................................................	25	17	0.06	1	1	0	0	0
.......TGCTTATGTACTTC-GCCTCCTTTAG...................................................................................................................................	25	17	0.06	1	1	0	0	0
..............GTACTTC-GCCTCCTTTAGCTG................................................................................................................................	21	17	0.06	1	1	0	0	0
..............................................................................................................................CCCTGTTTTCTTTC---TCACCATCA............	23	17	0.06	1	1	0	0	0
.....ACTGCTTATGTACTTC-GCCTCCTTT.....................................................................................................................................	25	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGA...............................................................................................................................	24	17	0.06	1	1	0	0	0
...........TATGTACTTC-GCCTCCTTTAGCTT................................................................................................................................	24	17	0.06	1	1	0	0	0
............ATGTACTTC-GCCTCCTTTAGCTGT...............................................................................................................................	24	17	0.06	1	1	0	0	0
........GCTTATGTACTTC-GCCTCCTTTAGCTGG...............................................................................................................................	28	17	0.06	1	1	0	0	0
.................................................................................................................................TGTTTTCTTTC---TCACCATCACTA.........	23	18	0.06	1	1	0	0	0
....................................................................................................................................TTTCTTTC---TCACCATCACTA.........	20	18	0.06	1	1	0	0	0
...................................................................................ACCTTGCGTTTATCTGCCGGA............................................................	21	20	0.05	1	1	0	0	0
.................................................................................GGACCTTGCGTTTATCTGCCGGAT...........................................................	24	20	0.05	1	1	0	0	0
...................................................................................ACCTTGCGTTTATCTGCCGGAT...........................................................	22	20	0.05	1	1	0	0	0
.........................................................................................CGTTTATCTGCCGGAAATCCACGCACA................................................	27	20	0.05	1	1	0	0	0
..................................................................................GACCTTGCGTTTATCTGCCGGAAAT.........................................................	25	20	0.05	1	1	0	0	0
.................................................................................GGACCTTGCGTTTATCTGCCGGT............................................................	23	20	0.05	1	1	0	0	0
....................................................................................CCTTGCGTTTATCTGCCGGAAATCCACGC...................................................	29	20	0.05	1	1	0	0	0
.........................................................................................CGTTTATCTGCCGGAAATCCACGC...................................................	24	20	0.05	1	0	0	1	0
...................................................................................ACCTTGCGTTTATCTGCCGGAAAT.........................................................	24	20	0.05	1	1	0	0	0
........................................................................................GCGTTTATCTGCCGGAAATCCACGC...................................................	25	20	0.05	1	1	0	0	0
................................................................................CGGACCTTGCGTTTATCTGCCGGAAAT.........................................................	27	20	0.05	1	1	0	0	0
..................................................................................GACCTTGCGTTTATCTGCCGG.............................................................	21	20	0.05	1	1	0	0	0
..........................................................................................................TCCACGCACAGTCTCCATTG......................................	20	20	0.05	1	0	0	1	0
.........................................................................................CGTTTATCTGCCGGAAATCCACG....................................................	23	20	0.05	1	0	0	1	0
.................................................................................................TGCCGGAAATCCACGCACAGTCTCCAT........................................	27	20	0.05	1	1	0	0	0
...............................................................................ACGGACCTTGCGTTTATCTGCCGGA............................................................	25	20	0.05	1	1	0	0	0
........................................................................................GCGTTTATCTGCCGGAAATCCACGCAC.................................................	27	20	0.05	1	1	0	0	0
...............................................................................................TCTGCCGGAAATCCACGCACAGTCTC...........................................	26	20	0.05	1	1	0	0	0
.......................................CAGGATGTAATTTATCATCGGCATCG...................................................................................................	26	20	0.05	1	0	0	1	0
............................TTTAGCTGGTCCAGGATGTAATTTA...............................................................................................................	25	20	0.05	1	0	0	1	0
.................................................................................................TGCCGGAAATCCACGCACAGTCTCC..........................................	25	20	0.05	1	1	0	0	0
.........................................................................................................ATCCACGCACAGTCTCCATTGCCCTG.................................	26	20	0.05	1	1	0	0	0
............................................TGTAATTTATCATCGGCATC....................................................................................................	20	20	0.05	1	1	0	0	0
............................TTTAGCTGGTCCAGGATGTA....................................................................................................................	20	20	0.05	1	1	0	0	0
.........................................................................................CGTTTATCTGCCGGAAATCCACGCA..................................................	25	20	0.05	1	1	0	0	0

droYak3

TCCAGGCTGCTTATAAATCGC-GCCTCCCTTAGTTGGTCGAGGATGTAGTTTATCCGTGGCATCGGGTAGGCATCCTTTATGGAGTTCGCGTTTATCTGCCTGAAGTCCACGCATAGTCTCCATTTTCCCGTTTTCTTCT---TCACCATGACGATGGGTGAGC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..............................................TAGTTTATCCGTGGCATCGGGTAGGC............................................................................................	26	20	2.00	40	0	4	0	0	0	0	0	0	0	0	36
.............................................................................................TATCTGCCTGAAGTCCACGCATAGTC.............................................	26	20	1.10	22	0	0	22	0	0	0	0	0	0	0	0
........................................................................................................................................TTCT---TCACCATGACGATGGGT....	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................TTCTTCT---TCACCATGACGATGGGTG...	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................TCCCTTAGTTGGTCGAGGATGTAGT..................................................................................................................	25	20	1.00	20	0	20	0	0	0	0	0	0	0	0	0
.............................................................................................................................TTCCCGTTTTCTTCT---TCACCATGACGA.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................TCTTCT---TCACCATGACGATGGGTG...	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................TATCTGCCTGAAGTCCACGCATAGTCT............................................	27	20	0.60	12	0	12	0	0	0	0	0	0	0	0	0
.............................................................................................TATCTGCCTGAAGTCCACGCATAGTCTC...........................................	28	20	0.55	11	0	0	2	0	0	0	0	0	0	0	9
............................................TGTAGTTTATCCGTGGCATCGGC.................................................................................................	23	20	0.50	10	0	0	10	0	0	0	0	0	0	0	0
.......................................................................................................................TCCATTTTCCCGTTTTCTTCT---TCACC................	26	20	0.50	10	0	0	10	0	0	0	0	0	0	0	0
.........................................................................TCCTTTATGGAGTTCGCGTTTATCTGCC...............................................................	28	20	0.30	6	0	3	3	0	0	0	0	0	0	0	0
.............................................................................................................................TTCCCGTTTTCTTCT---TCACCATGAC...........	25	20	0.30	6	0	2	4	0	0	0	0	0	0	0	0
.................................................TTTATCCGTGGCATCGGGTAGGCA...........................................................................................	24	20	0.30	6	0	6	0	0	0	0	0	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAGTCTCCATTT......................................	25	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
..................................................TTATCCGTGGCATCGGGTAGGCA...........................................................................................	23	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
.........................TCCCTTAGTTGGTCGAGGATGTAG...................................................................................................................	24	20	0.20	4	0	2	1	1	0	0	0	0	0	0	0
..............................................TAGTTTATCCGTGGCATCGGGTAGGCA...........................................................................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
...................................................................TAGGCATCCTTTATGGAGTTCGCGTT.......................................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
..............................................TAGTTTATCCGTGGCATCGGGTAGG.............................................................................................	25	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0
..............................................................TCGGGTAGGCATCCTTTATGGAGT..............................................................................	24	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
..................................................................................................................TAGTCTCCATTTTCCCGTTTTCTTC.........................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATTTTCCCGTTTTCTTCT---TCACCA...............	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
............................................................................TTTATGGAGTTCGCGTTTATCTGC................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
...........................................................................................TTTATCTGCCTGAAGTCCACGCATAGTC.............................................	28	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................................TTTCCCGTTTTCTTCT---TCACCATGAC...........	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.............................................................................................TATCTGCCTGAAGTCCACGCATAGTCA............................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
...............................................................................................TCTGCCTGAAGTCCACGCATAGTCTC...........................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
..............................................TAGTTTATCCGTGGCATCG...................................................................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
..............................TAGTTGGTCGAGGATGTAGTTTATCCG...........................................................................................................	27	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................TCTCCATTTTCCCGTTTTCTTCT---TC...................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......TGCTTATAAATCGC-GCCTCCCTTA....................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................CATTTTCCCGTTTTCTTCT---TCACCA...............	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................GAGGATGTAGTTTATCCGTGGCAT.....................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................TCGGGTAGGCATCCTTTATGGAGTTCG...........................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........TATAAATCGC-GCCTCCCTTAGTTG................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATTTTCCCGTTTTCTTCT---TCACCATGAC...........	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................TGTAGTTTATCCGTGGCATCGGGTAA..............................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................................TAGTTTATCCGTGGCATCGG..................................................................................................	20	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................AGTCCACGCATAGTCTCCATTTTCCCG.................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................TAGGCATCCTTTATGGAGTTCGCGTTG......................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TCCATTTTCCCGTTTTCTTCT---TCACCAT..............	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................TCCTTTATGGAGTTCGCGTT.......................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................GGATGTAGTTTATCCGTGGCAT.....................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................CGCATAGTCTCCATTTTCCCGTTTTC............................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................TGCCTGAAGTCCACGCATAGTCTC...........................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
..................CGC-GCCTCCCTTAGTTGGTCGAGGATG......................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................CCGTTTTCTTCT---TCACCATGAC...........	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...............................................AGTTTATCCGTGGCATCGGG.................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...............................AGTTGGTCGAGGATGTAGTTTATC.............................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................ATCTGCCTGAAGTCCACGCAT.................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................TGAAGTCCACGCATAGTCTCC..........................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................CACGCATAGTCTCCATTTTCCCGTTT..............................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................TTGGTCGAGGATGTAGTTTATCCG...........................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................TTCGCGTTTATCTGCCTGAAGTC........................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TTTTCCCGTTTTCTTCT---TCACCATGA............	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................................TTATCCGTGGCATCGGGTAGGCATCCTT......................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................TGTAGTTTATCCGTGGCATCGGGTAG..............................................................................................	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................TCTCCATTTTCCCGTTTTCTTCT---TCAC.................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................TCGCGTTTATCTGCCTGAAGTCCAC.....................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................CTGAAGTCCACGCATAGTC.............................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................TAGTTGGTCGAGGATGTAGTTTA...............................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................CGCGTTTATCTGCCTGAAGTCCACGCA..................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.............................TTAGTTGGTCGAGGATGTAGTTTATC.............................................................................................................	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.................................TTGGTCGAGGATGTAGTTTATCCGTG.........................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................TCCCTTAGTTGGTCGAGGATGT.....................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................TGGCATCGGGTAGGCATCCTTTATGG.................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................TGTAGTTTATCCGTGGCATCGGGTAGG.............................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................GGATGTAGTTTATCCGTGGCATCGGG.................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.............TAAATCGC-GCCTCCCTTAGTTG................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................TGGTCGAGGATGTAGTTTATCCGTG.........................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................AGGATGTAGTTTATCCGTGGCATC....................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......TGCTTATAAATCGC-GCCTCCCTTAG...................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TCCAGGCTGGTTATGTATTTC-GCCTCCCTTAACTGGTCCAGAATGTAGTTAATCATTGGCATTGGATACGCGTCCTTCACGGACCTCGCGTTTATCTGGCGAAAATCCACACACAACCTCCATTGACCCGTCTTCTTCT---TCACCATCACTATTGGTGAGC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
............................................TGTAGTTAATCATTGGCATTGGATA...............................................................................................	25	1	8.00	8	8	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACAACC.............................................	28	11	5.55	61	59	2	0	0	0	0	0
.........................TCCCTTAACTGGTCCAGAATGTAGT..................................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
............................................TGTAGTTAATCATTGGCATTGGA.................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACAAC..............................................	27	14	1.64	23	23	0	0	0	0	0	0
............................................................................................TTATCTGGCGAAAATCCACACACAACC.............................................	27	11	1.36	15	12	3	0	0	0	0	0
.............................................................................................TATCTGGCGAAAATCCACACACAACC.............................................	26	11	1.09	12	12	0	0	0	0	0	0
............................................TGTAGTTAATCATTGGCATTGGAT................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
............................................TGTAGTTAATCATTGGCATTGGATACG.............................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..............................................TAGTTAATCATTGGCATTGG..................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.........................................................TGGCATTGGATACGCGTCCTTCACGGA................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.........................................................................TCCTTCACGGACCTCGCGTTTATCTGGC...............................................................	28	1	1.00	1	1	0	0	0	0	0	0
..........TTATGTATTTC-GCCTCCCTTAACTGGTC.............................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
...........TATGTATTTC-GCCTCCCTTAACTGGTC.............................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..............................................TAGTTAATCATTGGCATTGGATACGCG...........................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..........................................AATGTAGTTAATCATTGGCATTGGATA...............................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
...........................................ATGTAGTTAATCATTGGCATTGGA.................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACA................................................	25	14	0.93	13	13	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATTGACC...................................	28	12	0.83	10	9	0	0	0	1	0	0
..........................................................................................................TCCACACACAACCTCCATTGACCCGTC...............................	27	15	0.73	11	10	0	0	0	1	0	0
.......................................................................................................................TCCATTGACCCGTCTTCTTCT---TCACCA...............	27	2	0.50	1	1	0	0	0	0	0	0
..........................................................................................................TCCACACACAACCTCCATTGACCCGTCT..............................	28	15	0.40	6	5	0	0	0	1	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATTG......................................	25	15	0.33	5	5	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACAA...............................................	26	14	0.29	4	4	0	0	0	0	0	0
............................................................................................TTATCTGGCGAAAATCCACACACAAC..............................................	26	14	0.29	4	4	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATTGACCC..................................	29	12	0.25	3	3	0	0	0	0	0	0
..................TTC-GCCTCCCTTAACTGGTCCAG..........................................................................................................................	23	9	0.22	2	2	0	0	0	0	0	0
.............................................................................................TATCTGGCGAAAATCCACACACAAC..............................................	25	14	0.21	3	3	0	0	0	0	0	0
..........................................................................................................TCCACACACAACCTCCATTGACCCGTCTT.............................	29	15	0.20	3	3	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACAACCT............................................	29	11	0.18	2	2	0	0	0	0	0	0
.........................................................................................CGTTTATCTGGCGAAAATCCACACAC.................................................	26	13	0.15	2	2	0	0	0	0	0	0
............................................................................................TTATCTGGCGAAAATCCACACACAA...............................................	25	14	0.14	2	2	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATTGA.....................................	26	15	0.13	2	2	0	0	0	0	0	0
.........................................................................................................ATCCACACACAACCTCCATTGACCCGTC...............................	28	15	0.13	2	2	0	0	0	0	0	0
...........................................................................................................CCACACACAACCTCCATTGACCCGTC...............................	26	15	0.13	2	2	0	0	0	0	0	0
..................TTC-GCCTCCCTTAACTGGTCC............................................................................................................................	21	9	0.11	1	1	0	0	0	0	0	0
........................................................................................................AATCCACACACAACCTCCATTGACCCG.................................	27	19	0.11	2	2	0	0	0	0	0	0
...............................................................................................TCTGGCGAAAATCCACACACAACCTCC..........................................	27	10	0.10	1	1	0	0	0	0	0	0
....................................................................................................................ACCTCCATTGACCCGTCTTCT...........................	21	20	0.10	2	1	0	0	0	1	0	0
..............................................................................................ATCTGGCGAAAATCCACACACAACC.............................................	25	11	0.09	1	1	0	0	0	0	0	0
...............................................................................................TCTGGCGAAAATCCACACACAACC.............................................	24	11	0.09	1	1	0	0	0	0	0	0
.........................................................................................CGTTTATCTGGCGAAAATCCACACACAA...............................................	28	13	0.08	1	1	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATTGAC....................................	27	13	0.08	1	1	0	0	0	0	0	0
............................................................................................TTATCTGGCGAAAATCCACACACAAA..............................................	26	14	0.07	1	1	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACACG................................................	25	14	0.07	1	0	1	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACAC.................................................	24	14	0.07	1	1	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACACA..................................................	23	15	0.07	1	1	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCATT.......................................	24	15	0.07	1	1	0	0	0	0	0	0
............................................................................................TTATCTGGCGAAAATCCACACA..................................................	22	15	0.07	1	1	0	0	0	0	0	0
.....................................................................................................GAAAATCCACACACAACCTCCAT........................................	23	15	0.07	1	1	0	0	0	0	0	0
............................................................................................................CACACACAACCTCCATTGACCCGTC...............................	25	16	0.06	1	1	0	0	0	0	0	0
............................................................................................................CACACACAACCTCCATTGACCCGTCTT.............................	27	16	0.06	1	1	0	0	0	0	0	0
...........................................................................................TTTATCTGGCGAAAATCCACA....................................................	21	17	0.06	1	1	0	0	0	0	0	0
......................................................................................................AAAATCCACACACAACCTCCATTGACC...................................	27	18	0.06	1	1	0	0	0	0	0	0
......................................................................................................AAAATCCACACACAACCTCCATTGACCC..................................	28	18	0.06	1	1	0	0	0	0	0	0
..........................................................................................................TCCACACACAACCTCCATTGACCCG.................................	25	19	0.05	1	1	0	0	0	0	0	0
......................................................................................................AAAATCCACACACAACCTCCATTG......................................	24	20	0.05	1	1	0	0	0	0	0	0

dgr_67

scaffold_14542:3245-3304 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-35.5	-35.5	-35.5