ID:

dgr_53

Coordinate:

scaffold_15252:3148206-3148270 +

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

antisense_to_intron

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.5 -25.5 -25.5

Flybase annnotation

Antisense to intron [Dgri\GH10697-in]; utr5 [utr5_plus_812]; utr5 [utr5_plus_813]

No Repeatable elements found

Sense Strand Reads

TTAGAAAGTGAACAGTGAACATAACAAAGCAAAATAACAGTCTAATCCAAAACAAGGTACATATTAGAGCGTTTCCTATCTTTGAGTATTGAAACCTCTGTATATACCTTCATTCGATTCGACTGATAATCTCATTAAAATCATTTCAGTTGATTAGAAGAGTGC

***********************************..(((((.((((......((((((.((((.((((.(((((.(((......)))..))))))))))))).)))))).....)))).)))))...*************************************
Read size # Mismatch Hit Count Total Norm Total V109

male body
M041

female body

..................................................AACAAGGTACATATTAGAGCGTTTC.......................................................................................... 25 0 1 39.00 39 38 1
..................................................AACAAGGTACATATTAGAGCGTTT........................................................................................... 24 0 1 20.00 20 13 7
..................................................AACAAGGTACATATTAGAGCGT............................................................................................. 22 0 1 19.00 19 18 1
..................................................AACAAGGTACATATTAGAGCGTT............................................................................................ 23 0 1 14.00 14 11 3
..................................................AACAAGGTACATATTAGAGCGTTTCT......................................................................................... 26 1 1 7.00 7 7 0
..................................................AACAAGGTACATATCAGAGTGTTTC.......................................................................................... 25 2 1 3.00 3 3 0
..................................................AACAAGGTACATATCAGAGTGTTT........................................................................................... 24 2 1 3.00 3 3 0
..................................................AACAAGGCACATATTAGAGCGTTTC.......................................................................................... 25 1 1 2.00 2 2 0
...................................................ACAAGGTACATATCAGAGTGTTTC.......................................................................................... 24 2 1 2.00 2 2 0
..................................................AACAAGATACATATTCGAGCGTTT........................................................................................... 24 2 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGAGCGC............................................................................................. 22 1 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGAGCGTATCT......................................................................................... 26 2 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGAGCG.............................................................................................. 21 0 1 1.00 1 0 1
..................................................AACATGGTACATATTAGAGCGTTTC.......................................................................................... 25 1 1 1.00 1 1 0
...................................................ACAAGGTACATATCAGAGTGTTTCC......................................................................................... 25 2 1 1.00 1 1 0
............................................................................................AACCTCTGTATATACCTTCAT.................................................... 21 0 1 1.00 1 0 1
..................................................AACAAAGTACATATTAGAGCGTTTC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTACATATCAGAGTGTT............................................................................................ 23 2 1 1.00 1 1 0
...................................................ACAAGGTACATATCAGAGTGTTT........................................................................................... 23 2 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGACCGTTT........................................................................................... 24 1 1 1.00 1 1 0
...................................................ACAAGGTACATATTAGAGCGTTTC.......................................................................................... 24 0 1 1.00 1 1 0
..............................................................................................CCTCTGTATATACCTTCATT................................................... 20 0 1 1.00 1 0 1
..................................................AACAAGGTACATATTAGCGCGTT............................................................................................ 23 1 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGCGCGTTTCT......................................................................................... 26 2 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGAGCGTTTT.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGCGCGT............................................................................................. 22 1 1 1.00 1 1 0
............................................................................................AACCTCTGTATATACCTTCATT................................................... 22 0 1 1.00 1 0 1
...................................................ACAAGGTACATATTAGAGCGTTTCA......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTGCATATTAGAGCGTTTC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGTGCGTTTC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AAGAAGGTACATATTAGAGCGT............................................................................................. 22 1 1 1.00 1 1 0
..................................................AACAAGGTACATATTAGAGCGTCTC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTACATATCAGAGTGTTTCC......................................................................................... 26 2 1 1.00 1 1 0
.............................................................................................ACCTCTGTATATACCTTCATT................................................... 21 0 1 1.00 1 0 1
..................................................AACAAGGTACATAATAGAGCGTTTC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AACAAGGTCCATATCAGAGTGTTT........................................................................................... 24 3 2 0.50 1 1 0

Anti-sense strand reads

AATCTTTCACTTGTCACTTGTATTGTTTCGTTTTATTGTCAGATTAGGTTTTGTTCCATGTATAATCTCGCAAAGGATAGAAACTCATAACTTTGGAGACATATATGGAAGTAAGCTAAGCTGACTATTAGAGTAATTTTAGTAAAGTCAACTAATCTTCTCACG

*************************************..(((((.((((......((((((.((((.((((.(((((.(((......)))..))))))))))))).)))))).....)))).)))))...***********************************
Read size # Mismatch Hit Count Total Norm Total M041

female body

V109

male body
...........................TGGTTTTCTTGGCAGATTA....................................................................................................................... 19 3 20 0.30 6 3 3

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15252:3148156-3148320 + dgr_53 confident TTAGAAAGTGAA-C------AGTGAACATAA-------------CAAAGCA------------AA-----ATAACAGTCTAATCCAAAACAAGGTACATATTAGAGCGTTTCCTATCTTTGAGTATTGAAACCTCTGTATATACCTTCAT-TCGATT-CGACTGA--TAATCTCAT-TAAAATC----------A---------T----------------TTCAGTTG---A-TTA-----------------------------GAAGAGTGC---
droVir3 scaffold_12963:3616325-3616482 + dvi-mir-963 Known_mirbase TTGGAGTT--AA------------------TGTACG-----------------------GATGGGCATAAACAACAATCTAATCTGAAACAAGGTACATATCAGAGTGTTTCTTAAATTTGATTATTGAAACCTCTGTATATACCTTTCATTGGATT-AAACTGA--TAAGCACAT-GTTTCAAAA-----G--T---------T---------------------TT-------------CATAT--------------------TGAAAATAC---
droMoj3 scaffold_6500:14019339-14019518 + dmo_12 confident GAATCGGGTTAA-C------TTTGGCAATTG-------------GAGTGCG----CACTGA-----------ATCGGTCTAATCTAAAACAAGGTACATATCAGAGTGTTTCCCGTATTCGAGTTTTGAAACCTCTGTATATACCTTTCATTAGATT-CAACCGAA-AGTCCAT-A-AATATTGAT--------------------------------------------------------ATATGATGATGATTTTCCAATTGTGATGAAATC---
droWil2 scf2_1100000004521:8625036-8625217 - dwi_93 confident ATATGAAA--------------------TCATTATTAATCATAGTTAATTGAGTTAATTG---AA-----TTCTAATTCTAGTCTAAAACAAGGTACATATCAGGTTGTTTCGTATATTTGAAGCCTGAAACATCTGTATCTACCTTTGTTTCGAATAGGACTAA--AGAGTTTTCTTTAAGCC----------C---------A----------------ACACATTTGTTGTCTGTGTC--------------------AGT--------TGA---
droAna3 scaffold_12916:11085433-11085574 + dan_98 confident TTAAAAAG-------------------------------------------------------TG-----TTCTTGATTTAATCTAAAACAAGGTACATATCTGGTTGTTTCCTATATTCAAAGTTTGAAACATCTGTATCTACCTTTGTTTCGATT-AAACTAA--AGAGCTACT-AAGAATAC------------------------------------GAGTGTTC---G-CGG-----------------------------GATGAGCAT---
droBip1 scf7180000396572:743206-743338 + T---------------------------------------------------------------G-----TTCTTGATTTAATCTAAAACAAGGTACATATCGGG-TGTTTCCTGCATTTTAAGATTGAAACATCTGTATCTACCTTTGTTTCGATT-TAACTAA--AGAGCTACA-CAGATAAAA-----G--------------------------------TGTTC---A-----------------------------TCGGAAAGAATCC---
droKik1 scf7180000302389:430296-430441 - AATGAGGG---------------------------T-----------------------G---GG-----TCATCAGTGCAGTCTAGAACAAGGTACATATCAGG-TGTTTCCTGCATTCGAAAATCGAAACATCTGTATCTACCTTAGTTTCGAAT-GGACTCA--AAAGCAACT-CTAACCC----------A---------C----------------AAGAGTTTGAGG--TG-----------------------------GAAAAGGTA---
droFic1 scf7180000453932:196565-196722 - TGAGTGC---------------------------CT-----------------------CACTCG-----CTTTTAATCTAATCTAAAACAAGGTATTTATCAGGTTGTTTCCTATATTCGAAGTTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGCGCAACG-CCACTCTAATTAAAATAAT----CAGTC---------------------CC---------------------------------AGTAATGAGAATCC---
droEle1 scf7180000490753:31582-31735 + T--------------------------------ACT-----------------------GAATGG-----TTCTCCATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATGATCGATGATTGAAACATCTGTATCTACCTCTGTTTCGAAT-GGACAAA--AGGCCAGCT-CCAACAAAGTAAC-----------------------------------------------------TATCGTTT-----TGTCAAATTATTTAAA-CC-AG
droRho1 scf7180000778253:32496-32657 - GAAATGAG------------------------TACT-----------------------GACTGG-----CTCTCGATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATATTCAACCGTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGACCAACT-CCACCATAATAAA--------------------------------T--------------------TATTGTGT-----TGCCAAATTATTCAAGCCC---
droBia1 scf7180000302422:3831630-3831790 + AGAAAGTG--GAGAAAAGTACTTAG----CACTACT-----------------------GACTTG-----TTCTTAATCTAATCTAAAACAAGGTACATATCAGCTTGTTTCCTATATTTGAAGGCTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACATA--AGAGCAACT-TCTCAATAG------------------------------------------------CTAT--GCATGC--------------------------TGC---
droTak1 scf7180000415871:386334-386496 + ATAAG---------------------------CACT-----------------------GACTTG-----TTCTTAATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATTTTCGACGGTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAAAAAGAGCAACT-CCTCCTAAGTTA---------------------------------T-----------------GCATGCTATTG-----CGCCAAATTAATATAAACC---
droEug1 scf7180000409063:318316-318479 + ATACTGAG------------------------TAGT-----------------------GACTTG-----TTCTTCTTCTAATCTAGAACAAGGTATATATCAGATTGTTTCCTATATTCGACGGCTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGAGCACCC--CTCGAAAGTAAT---ACTCGAGCAATACCAGTAATAATAATCCG------------------------------------------------------AG
dm3 chr2L:5641956-5642107 + dme-mir-963 Known_mirbase GAAGAGAG--GA--------TATGGCAATTACAACT-----------------------AA-TTT-----TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTCGA---TCGAAACATCTGTATATACCTTTGTTCCGATT-GGACAAA--AGTGCGTCT-TCTAGTTGG------------------------------------------------TGATACC-----------------------------AATAA---
droSim2 2l:5446688-5446864 + dsi-mir-963 Known_mirbase GAAGAGAG--GA--------CATGGCAATTACTACT-----------------------GATT-------TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTAGA---TCGAAACATCTGTATATACCTTTGATCCGGTT-GGACAAA--AGTGCATCT-TCTAGTGGGTAAA--------------------------------T-----------------CCATGTGGTTA-----TGACAAGTCAATCAAAATCTTG
droSec2 scaffold_5:3719674-3719851 + dse_67 confident GAAGAGAG--GA--------CATGGCAATTACTACT-----------------------GAT-TT-----TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTAGA---TAGAAACATCTGTATATACCTTTGATCCGGTT-GGACAAA--AGTGCATCT-TCTAGTGGGTAAA--------------------------------T-----------------CCATGTGGTTA-----TGATAAGTCAATCAAAATCTTG
droYak3 2L:13551163-13551316 - dya_63 confident AGTGGGT--------------------ATCACTACT-----------------------GCATTG-----TTCTTGGTCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATATTGGATGATCGAAACATCTGTATATACCTTTGTTCCGAAT-GGACGAA--AGAGCATCT-TCAAGTT----------A---------T----------------AT-----------------CC-------TA-----TGATCAATC-----AATGA---
droEre2 scaffold_4929:5730359-5730503 + der_232 confident TGTGGGC--------------------ATCAGTGCT-----------------------GC-TTG-----TTCTTAGTCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTGTATTGGATGATCGAAACATCTGTATATACCTTTGTTCCGAAT-GGACGAA--AGAGCATCT-TCTAGTTGG------------------------------------------------TTACATCCT-----------------------------TGC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
TTAGAAAGTGAA-C------AGTGAACATAA-------------CAAAGCA------------AA-----ATAACAGTCTAATCCAAAACAAGGTACATATTAGAGCGTTTCCTATCTTTGAGTATTGAAACCTCTGTATATACCTTCAT-TCGATT-CGACTGA--TAATCTCAT-TAAAATC----------A---------T----------------TTCAGTTG---A-TTA-----------------------------GAAGAGTGC---SizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
.......................................................................................AACAAGGTACATATTAGAGCGTTTC......................................................................................................................................................................25139.0039138
.......................................................................................AACAAGGTACATATTAGAGCGTTT.......................................................................................................................................................................24120.0020713
.......................................................................................AACAAGGTACATATTAGAGCGT.........................................................................................................................................................................22119.0019118
.......................................................................................AACAAGGTACATATTAGAGCGTT........................................................................................................................................................................23114.0014311
.......................................................................................AACAAGGTACATATTAGAGCGTTTCT.....................................................................................................................................................................2617.00707
.......................................................................................AACAAGGTACATATTAGAGCGC.........................................................................................................................................................................2211.00101
.......................................................................................AACAAGGTACATATTAGAGCG..........................................................................................................................................................................2111.00110
.................................................................................................................................AACCTCTGTATATACCTTCAT-...............................................................................................................................2111.00110
........................................................................................ACAAGGTACATATTAGAGCGTTTC......................................................................................................................................................................2411.00101
...................................................................................................................................CCTCTGTATATACCTTCAT-T..............................................................................................................................2011.00110
.......................................................................................AACAAGGTACATATTAGAGCGTTTT......................................................................................................................................................................2511.00101
.................................................................................................................................AACCTCTGTATATACCTTCAT-T..............................................................................................................................2211.00110
........................................................................................ACAAGGTACATATTAGAGCGTTTCA.....................................................................................................................................................................2511.00101
..................................................................................................................................ACCTCTGTATATACCTTCAT-T..............................................................................................................................2111.00110
droVir3
TTGGAGTT--AA------------------TGTACG-----------------------GATGGGCATAAACAACAATCTAATCTGAAACAAGGTACATATCAGAGTGTTTCTTAAATTTGATTATTGAAACCTCTGTATATACCTTTCATTGGATT-AAACTGA--TAAGCACAT-GTTTCAAAA-----G--T---------T---------------------TT-------------CATAT--------------------TGAAAATAC---SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................AACAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................24175701.00757017075499364399677202374730813421914160521774957481189416820125873819137292563520609172680000000000000000210525213508100001141228800000
.......................................................................................AACAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................25117368.00173681010028103915934352775310000000013934222611161725041904713237701332000022148200000000000000010101170600000023312100000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................26115595.001559510110231329172161331300010003017154015168215791540928294301623100020163900000000000000000000083210000000100000000
.......................................................................................AACAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................24113609.0013609101002010358524215641020001101214001930881706173054917610124000008141100000000000000000100067030100004112100000
.......................................................................................AACAAGGTACATATCAGAGTGT.........................................................................................................................................................................2219406.009406405913338426109319809314000100572003915204131148717486521851157352233208740000000000000000010535000924000126142121610000
.......................................................................................AACAAGGTACATATCAGAGTGTT........................................................................................................................................................................2315659.005659001101518410246334100022017013571024315331711741137220873041210111334900000000000000000000617702400043405000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................2715609.005609006044066018600002000204682030035407571557158706870000369700000000000000000000010600000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCCC...................................................................................................................................................................2811772.001772004031222004000000002017000020098167313716077000022170000000000000000000002400200000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTT......................................................................................................................................................................251709.0070900102212360390003110100320100157147123319405300007630000000000000000000223400000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTTCC....................................................................................................................................................................271708.0070800000261004300000000002600010011151434518204000004510000000000000000000003000000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................241640.0064000204442613126000000000037001002310968117302700001510000000000000000000001500000000000000000
.......................................................................................AACAAGGTACATATCAGAGTG..........................................................................................................................................................................211623.00623203001009010000000000041001404310386471660290010067000000000000000000001900200056614300000
........................................................................................ACAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................231603.00603006012911002100000000004511301201351192910504100001350000000000000000000001700000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTTC.....................................................................................................................................................................261522.005220000121100900000000000350000122102102237502100000290000000000000000000001700000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................251472.0047200101310105100000000106000001006646268003800001570000000000000000000001100000000000000000
..................................................................................................................................ACCTCTGTATATACCTTTCATT..............................................................................................................................221222.0022210100001000000000000000000017354214500000002000000000000000000000001200013823200010
.......................................................................................AACAAGGTACATATCAGAGT...........................................................................................................................................................................201196.001960000071001000000000025002000034276250250000040000000000000000000000300000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTC........................................................................................................................................................................231179.001790000027011180000000000180000000121771901800000220000000000000000000001800000000001000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCT.....................................................................................................................................................................261176.001760000130601000000000005000000142372030080000011000000000000000000000200000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTCC.......................................................................................................................................................................241146.0014600001230001000000000002300000006821801900001250000000000000000000001000000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................261143.0014300000100003000000000015000000014176360260000016000000000000000000000000000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................231126.0012600000800018000000000025000000010105190120000015000000000000000000000400000000000000000
.........................................................................................CAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................221103.00103000000010300000000009000000020233160100000011000000000000000000000700000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCA.....................................................................................................................................................................261103.001030000120002000000000011000011017131117070100111000000000000000000000400300000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCCT...................................................................................................................................................................28199.009900000100000000000000200000001817134401000003000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTCT......................................................................................................................................................................25194.0094000009000900000000007000001215103120110000011000000000000000000000400000000000000000
.............................................................................................GTACATATCAGAGTGTTT.......................................................................................................................................................................18188.008800102501020000000000160000000620220110000020000000000000000000000000000000000000000
...........................................................................................AGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................22183.008300000600028100000000017000000001010160000013000000000000000000000000000000000000000
............................................................................................GGTACATATCAGAGTGTTT.......................................................................................................................................................................19169.006900000110004000000000018000000044010100000017000000000000000000000000000000000000000
.................................................................................................................................AACCTCTGTATATACCTTTCATT..............................................................................................................................23164.006410100000000000000100000000013277800000001000000000000000000000100300000001000000
..........................................................................................AAGGTACATATCAGAGTGTTT.......................................................................................................................................................................21164.006400001304020000000000200001001284909000008000000000000000000000100000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCTCC...................................................................................................................................................................28162.0062000000000000000000000000000087102203000005000000000000000000000700000000000000000
.............................................................................................GTACATATCAGAGTGTTTC......................................................................................................................................................................19160.006000000507027000000000060000000041004000006000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTA......................................................................................................................................................................25152.005200000202020000000000300000107541008001014000000000000000000000200000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTT........................................................................................................................................................................22149.004900200101240000000000400000007341002000006000000000000000000000300000000000000000
........................................................................................ACAAGGTACATATCAGAGTGTTTCCCC...................................................................................................................................................................27146.004600000700000000000000600000002271305000004000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCTC....................................................................................................................................................................27145.004500000200010000000000000000008821007000005000000000000000000000200000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTA.......................................................................................................................................................................24142.00420020000002000000000030010024414604101014000000000000000000000200000000000000000
.................................................................................................................................AACCTCTGTATATACCTTTCATC..............................................................................................................................23134.003400000000000000000000000000009641200000002000000000000000001000000000000000000000
..................................................................................................................................ACCTCTGTATATACCTTTCATTC.............................................................................................................................23133.003300000000000000000000000002004931500000000000000000000000000000000000000000000000
..............................................................................................TACATATCAGAGTGTTTCC.....................................................................................................................................................................19133.0033000003000000000000001100000000000010000009000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTCA......................................................................................................................................................................25132.00320000000001000000000030000001922203000007000000000000000000000200000000000000000
...........................................................................................AGGTACATATCAGAGTGTTT.......................................................................................................................................................................20132.00320000050102000000000050000000130205000008000000000000000000000000000000000000000
..........................................................................................AAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................23126.00260000010008000000000010000000211702000002000000000000000000000100000000000000000
.............................................................................................GTACATATCAGAGTGTTC.......................................................................................................................................................................18226.0052000004000270000000000200000001000013000005000000000000000000000000000000000000000
..................................................................................................................................ACCTCTGTATATACCTTTCATC..............................................................................................................................22126.00260000000000000000000000000000652501000002000000000000000000000000000012200000000
.......................................................................................AACAAGGTACATATCAGAG............................................................................................................................................................................19124.00240000200000000000000060000000612501000001000000000000000000000000000000000000000
.........................................................................................CAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................23124.00240000000104000000000040000010222303000001000000000000000000000100000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTG......................................................................................................................................................................25123.00230000100001000000000010000020550301000003000000000000000000000100000000000000000
..........................................................................................AAGGTACATATCAGAGTGTTTC......................................................................................................................................................................22123.00230000011412000000000000000000612201000002000000000000000000000000000000000000000
.................................................................................................................................AACCTCTGTATATACCTTTCAT...............................................................................................................................22123.00230000000000000000000000001000571500000000000000000000000000000000000001002010000
..........................................................................................AAGGTACATATCAGAGTGTTC.......................................................................................................................................................................21119.00190000080005000000000040000000000001000001000000000000000000000000000000000000000
.........................................................................................CAAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................24119.00190000040001000000000040000000060101000002000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGA.............................................................................................................................................................................18119.00190010010000000000000020000010544100000000000000000000000000000000000000000000000
........................................................................................ACAAGGTACATATCAGAGTGT.........................................................................................................................................................................21118.00180040000000000000000000000000322600000010000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCA....................................................................................................................................................................27118.00180000020000000000000000000000613302000001000000000000000000000000000000000000000
..................................................................................................................................ACCTCTGTATATACCTTTCAT...............................................................................................................................21117.00170000000000000000000000000000742000000000000000000000000000000000000040000000000
.................................................................................................................................AACCTCTGTATATACCTTTCATTC.............................................................................................................................24116.00160000000000000000000000000000255400000000000000000000000000000000000000000000000
...........................................................................................AGGTACATATCAGAGTGTTC.......................................................................................................................................................................20214.00280000061007100000000020000000111002000006000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTCG.....................................................................................................................................................................26113.00130000030000000000000010000000222201000000000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGC.........................................................................................................................................................................22113.00130000000002000000000020000010120100000004000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTT..........................................................................................................................................................................21113.00130000000000000000000070000000001005000000000000000000000000000000000000000000000
..............................................................................................TACATATCAGAGTGTTTC......................................................................................................................................................................18112.00120000010103000000000040000000000000000003000000000000000000000000000000000000000
...........................................................................................AGGTACATATCAGAGTGTTTC......................................................................................................................................................................21112.00120000120003000000000010000000000002000003000000000000000000000000000000000000000
.............................................................................................GTACATATCAGAGTGTTTCC.....................................................................................................................................................................20112.00120000020004000000000020000000020001000001000000000000000000000000000000000000000
...........................................................................................AGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................23112.00120000010003000000000020000000000101000003000000000000000000000100000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTAA......................................................................................................................................................................25111.00110010000000000000000000010122000000004000000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTCTC.....................................................................................................................................................................26111.00110000000000000000000010000000120301000001000000000000000000000200000000000000000
...............................................................................................ACATATCAGAGTGTTTCC.....................................................................................................................................................................18110.00100000030001000000000010000000100101000002000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTG.......................................................................................................................................................................24110.00100000021001000000000010000000020101001000000000000000000000000000000000000000000
............................................................................................GGTACATATCAGAGTGTT........................................................................................................................................................................18110.00100000000001000000000030000000100103000001000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTTAA.....................................................................................................................................................................2619.0090000000000000100000000000010010101002020000000000000000000000000000000000000000
..............................................................................................TACATATCAGAGTGTTTCCCC...................................................................................................................................................................2138.67260000060000000000000040000000000008000008000000000000000000000000000000000000000
..............................................................................................TACATATCAGAGTGTTTCCC....................................................................................................................................................................2028.50170000020000000000000030000000100003000008000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGG.........................................................................................................................................................................2218.0081000010000000000000000000000000001000001000000000000000000000100000000011100000
........................................................................................ACAAGGTACATATCAGAGTGTTTCT.....................................................................................................................................................................2518.0080000000000000000000000000000300302000000000000000000000000000000000000000000000
...........................................................................................AGGTACATATCAGAGTGT.........................................................................................................................................................................1817.0070000000000000000000030000000010001000002000000000000000000000000000000000000000
.......................................................................................AACAAGGTACATATCAGAGTGTTAAA.....................................................................................................................................................................2617.0070000000000000000000000000011000000003020000000000000000000000000000000000000000
..........................................................................................AAGGTACATATCAGAGTGTT........................................................................................................................................................................2017.0070000000100000000000020000000010002000001000000000000000000000000000000000000000
.........................................................................................CAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................2216.0060000010003000000000000000000100000000000000000000000000000000100000000000000000
droMoj3
GAATCGGGTTAA-C------TTTGGCAATTG-------------GAGTGCG----CACTGA-----------ATCGGTCTAATCTAAAACAAGGTACATATCAGAGTGTTTCCCGTATTCGAGTTTTGAAACCTCTGTATATACCTTTCATTAGATT-CAACCGAA-AGTCCAT-A-AATATTGAT--------------------------------------------------------ATATGATGATGATTTTCCAATTGTGATGAAATC---SizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
........................................................................................ACAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................2417545.00754560549517389
.......................................................................................AACAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................2513143.0031431061813117
.......................................................................................AACAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................2411495.00149590182901439
........................................................................................ACAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................231974.00974604190945
.......................................................................................AACAAGGTACATATCAGAGTGT.........................................................................................................................................................................221522.0052200170514
........................................................................................ACAAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................251294.0029410150287
.......................................................................................AACAAGGTACATATCAGAGTGTT........................................................................................................................................................................231236.0023610130231
.......................................................................................AACAAGGTACATATCAGAGTGTTTCC.....................................................................................................................................................................261177.0017700000177
........................................................................................ACAAGGTACATATCAGAGTGTT........................................................................................................................................................................221144.0014400030141
........................................................................................ACAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................23173.00730010072
.......................................................................................AACAAGGTACATATCAGAGTGTTTT......................................................................................................................................................................25159.00590000059
.......................................................................................AACAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................24158.00580000058
........................................................................................ACAAGGTACATATCAGAGTGTTTCT.....................................................................................................................................................................25151.00510001050
.......................................................................................AACAAGGTACATATCAGAGTGTTTCT.....................................................................................................................................................................26136.00360000036
........................................................................................ACAAGGTACATATCAGAGTGTTTCA.....................................................................................................................................................................25122.00220002020
........................................................................................ACAAGGTACATATCAGAGTGTTTT......................................................................................................................................................................24121.00210010020
.......................................................................................AACAAGGTACATATCAGAGTG..........................................................................................................................................................................21116.00161000015
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................27115.00150000015
.......................................................................................AACAAGGTACATATCAGAGTGTTTCA.....................................................................................................................................................................26114.00140000014
.......................................................................................AACAAGGTACATATCAGAGTGTTTTT.....................................................................................................................................................................26113.00130000013
........................................................................................ACAAGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................26112.00120000012
.........................................................................................CAAGGTACATATCAGAGTGTTTC......................................................................................................................................................................23112.00121001010
........................................................................................ACAAGGTACATATCAGAGTGT.........................................................................................................................................................................2119.009000009
........................................................................................ACAAGGTACATATCAGAGTGTTTA......................................................................................................................................................................2419.009000009
.........................................................................................CAAGGTACATATCAGAGTGTTT.......................................................................................................................................................................2213.003000003
........................................................................................ACAAGGTACATATCAGAGTGTTTCCCC...................................................................................................................................................................2713.003000003
.......................................................................................AACAAGGTACATATCAGAGTGTTCT......................................................................................................................................................................2513.003000003
........................................................................................ACAAGGTACATATCAGAGT...........................................................................................................................................................................1912.002000002
........................................................................................ACAAGGTACATATCAGAGTG..........................................................................................................................................................................2012.002000002
.............................................................................................GTACATATCAGAGTGTTTC......................................................................................................................................................................1912.002000002
..................................................................................................................................ACCTCTGTATATACCTTTCATT..............................................................................................................................2212.002100001
........................................................................................ACAAGGTACATATCAGAGTGTTCT......................................................................................................................................................................2412.002000002
.......................................................................................AACAAGGTACATATCAGAGT...........................................................................................................................................................................2012.002000002
........................................................................................ACAAGGTACATATCAGAGTGTTTTT.....................................................................................................................................................................2512.002000002
.......................................................................................AACAAGGTACATATCAGAGTGTC........................................................................................................................................................................2312.002000002
........................................................................................ACAAGGTACATATCAGAGTGTC........................................................................................................................................................................2212.002000002
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCCC...................................................................................................................................................................2812.002000002
........................................................................................ACAAGGTACATATCAGAGTGTTTCCA....................................................................................................................................................................2611.001000001
.........................................................................................CAAGGTACATATCAGAGTGTTC.......................................................................................................................................................................2211.001000001
.......................................................................................AACAAGGTACATATCAGAGTGTTTG......................................................................................................................................................................2511.001000001
..........................................................................................AAGGTACATATCAGAGTGTTTC......................................................................................................................................................................2211.001000001
........................................................................................ACAAGGTACATATCAGAGTGTTG.......................................................................................................................................................................2311.001000001
.......................................................................................AACAAGGTACATATCAGAGTGA.........................................................................................................................................................................2211.001000001
........................................................................................ACAAGGTACATATCAGAGTGTTTCATT...................................................................................................................................................................2711.001000001
............................................................................................GGTACATATCAGAGTGTTTC......................................................................................................................................................................2011.001100000
........................................................................................ACAAGGTACATATCAGAGTGTTTG......................................................................................................................................................................2411.001000001
.................................................................................................................................AACCTCTGTATATACCTTTCATT..............................................................................................................................2311.001100000
..........................................................................................AAGGTACATATCAGAGTGT.........................................................................................................................................................................1911.001000001
..........................................................................................AAGGTACATATCAGAGTGTTT.......................................................................................................................................................................2111.001000001
.......................................................................................AACAAGGTACATATCAGAGTGTTTCCT....................................................................................................................................................................2711.001000001
.........................................................................................CAAGGTACATATCAGAGTGTTTCCC....................................................................................................................................................................2511.001100000
.......................................................................................AACAAGGTACATATCAGAGTGTTTTTT....................................................................................................................................................................2711.001000001
.................................................................................................................................AACCTCTGTATATACCTTTCATC..............................................................................................................................2311.001000001
..............................................................................................TACATATCAGAGTGTTTCT.....................................................................................................................................................................1911.001000001
..................................................................................................................................ACCTCTGTATATACCTTTCATTC.............................................................................................................................2311.001100000
........................................................................................................AGTGTTTCCCGTATTCGAGTTTTGA.....................................................................................................................................................2511.001000001
.............................................................................................GTACATATCAGAGTGTTC.......................................................................................................................................................................1811.001000001
.......................................................................................AACAAGGTACATATCAGAGTGTTTA......................................................................................................................................................................2511.001000001
........................................................................................ACAAGGTACATATCAGAGTGTTTCCTCC..................................................................................................................................................................2811.001000100
droWil2
ATATGAAA--------------------TCATTATTAATCATAGTTAATTGAGTTAATTG---AA-----TTCTAATTCTAGTCTAAAACAAGGTACATATCAGGTTGTTTCGTATATTTGAAGCCTGAAACATCTGTATCTACCTTTGTTTCGAATAGGACTAA--AGAGTTTTCTTTAAGCC----------C---------A----------------ACACATTTGTTGTCTGTGTC--------------------AGT--------TGA---SizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
........................................................................................ACAAGGTACATATCAGGTTGTT........................................................................................................................................................................22127.0027311904
.......................................................................................AACAAGGTACATATCAGGTTGT.........................................................................................................................................................................22126.0026511811
.......................................................................................AACAAGGTACATATCAGGTTGTT........................................................................................................................................................................23113.001320704
........................................................................................ACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................2318.00841300
.......................................................................................AACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................2416.00601320
..................................................................................................................................ACATCTGTATCTACCTTTGTTTT.............................................................................................................................2313.00302100
.......................................................................................AACAAGGTACATATCAGGTTG..........................................................................................................................................................................2113.00300210
..................................................................................................................................ACATCTGTATCTACCTTTGTTT..............................................................................................................................2213.00301101
........................................................................................ACAAGGTACATATCAGGTTGT.........................................................................................................................................................................2112.00200200
........................................................................................ACAAGGTACATATCAGGTTGTTTC......................................................................................................................................................................2412.00200011
.......................................................................................AACAAGGTACATATCAGGTTGC.........................................................................................................................................................................2211.00100100
..................................................................................................................................ACATCTGTATCTACCTTTGTT...............................................................................................................................2111.00100100
.................................................................................................................................AACATCTGTATCTACCTTTGT................................................................................................................................2111.00100100
........................................................................................ACAAGGTACATATCAGGTTGTTC.......................................................................................................................................................................2311.00100100
........................................................................................ACAAGGTACATATCAGGTTG..........................................................................................................................................................................2011.00100001
.........................................................................................CAAGGTACATATCAGGTTGTT........................................................................................................................................................................2111.00101000
..........................................................................................AAGGTACATATCAGGTTGTTT.......................................................................................................................................................................2111.00100010
........................................................................................ACAAGGTACATATCAGGTTGTTTCA.....................................................................................................................................................................2511.00100010
droAna3
TTAAAAAG-------------------------------------------------------TG-----TTCTTGATTTAATCTAAAACAAGGTACATATCTGGTTGTTTCCTATATTCAAAGTTTGAAACATCTGTATCTACCTTTGTTTCGATT-AAACTAA--AGAGCTACT-AAGAATAC------------------------------------GAGTGTTC---G-CGG-----------------------------GATGAGCAT---SizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
........................................................................................ACAAGGTACATATCTGGTTGTT........................................................................................................................................................................22112.0012200352
........................................................................................ACAAGGTACATATCTGGTTGTTTC......................................................................................................................................................................2417.007110023
........................................................................................ACAAGGTACATATCTGGTTGTTT.......................................................................................................................................................................2317.007000160
.......................................................................................AACAAGGTACATATCTGGTTGTTT.......................................................................................................................................................................2416.006200211
.................................................................................................................................AACATCTGTATCTACCTTTGT................................................................................................................................2116.006100122
........................................................................................ACAAGGTACATATCTGGTTGT.........................................................................................................................................................................2115.005100040
.......................................................................................AACAAGGTACATATCTGGTTGT.........................................................................................................................................................................2215.005100040
.................................................................................................................................AACATCTGTATCTACCTTTGTTT..............................................................................................................................2313.003300000
.................................................................................................................................AACATCTGTATCTACCTTTGTT...............................................................................................................................2213.003300000
..................................................................................................................................ACATCTGTATCTACCTTTGTTTT.............................................................................................................................2313.003300000
.................................................................................................................................AACATCTGTATCTACCTTTG.................................................................................................................................2011.001000001
.......................................................................................AACAAGGTACATATCTGGTT...........................................................................................................................................................................2011.001100000
.......................................................................................AACAAGGTACATATCTGGTTGTT........................................................................................................................................................................2311.001100000
droBip1
T---------------------------------------------------------------G-----TTCTTGATTTAATCTAAAACAAGGTACATATCGGG-TGTTTCCTGCATTTTAAGATTGAAACATCTGTATCTACCTTTGTTTCGATT-TAACTAA--AGAGCTACA-CAGATAAAA-----G--------------------------------TGTTC---A-----------------------------TCGGAAAGAATCC---SizeHit CountTotal NormTotal
No Reads
droKik1
AATGAGGG---------------------------T-----------------------G---GG-----TCATCAGTGCAGTCTAGAACAAGGTACATATCAGG-TGTTTCCTGCATTCGAAAATCGAAACATCTGTATCTACCTTAGTTTCGAAT-GGACTCA--AAAGCAACT-CTAACCC----------A---------C----------------AAGAGTTTGAGG--TG-----------------------------GAAAAGGTA---SizeHit CountTotal NormTotal
No Reads
droFic1
TGAGTGC---------------------------CT-----------------------CACTCG-----CTTTTAATCTAATCTAAAACAAGGTATTTATCAGGTTGTTTCCTATATTCGAAGTTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGCGCAACG-CCACTCTAATTAAAATAAT----CAGTC---------------------CC---------------------------------AGTAATGAGAATCC---SizeHit CountTotal NormTotal
No Reads
droEle1
T--------------------------------ACT-----------------------GAATGG-----TTCTCCATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATGATCGATGATTGAAACATCTGTATCTACCTCTGTTTCGAAT-GGACAAA--AGGCCAGCT-CCAACAAAGTAAC-----------------------------------------------------TATCGTTT-----TGTCAAATTATTTAAA-CC-AGSizeHit CountTotal NormTotal
No Reads
droRho1
GAAATGAG------------------------TACT-----------------------GACTGG-----CTCTCGATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATATTCAACCGTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGACCAACT-CCACCATAATAAA--------------------------------T--------------------TATTGTGT-----TGCCAAATTATTCAAGCCC---SizeHit CountTotal NormTotal
No Reads
droBia1
AGAAAGTG--GAGAAAAGTACTTAG----CACTACT-----------------------GACTTG-----TTCTTAATCTAATCTAAAACAAGGTACATATCAGCTTGTTTCCTATATTTGAAGGCTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACATA--AGAGCAACT-TCTCAATAG------------------------------------------------CTAT--GCATGC--------------------------TGC---SizeHit CountTotal NormTotal
No Reads
droTak1
ATAAG---------------------------CACT-----------------------GACTTG-----TTCTTAATCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATTTTCGACGGTTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAAAAAGAGCAACT-CCTCCTAAGTTA---------------------------------T-----------------GCATGCTATTG-----CGCCAAATTAATATAAACC---SizeHit CountTotal NormTotal
No Reads
droEug1
ATACTGAG------------------------TAGT-----------------------GACTTG-----TTCTTCTTCTAATCTAGAACAAGGTATATATCAGATTGTTTCCTATATTCGACGGCTGAAACATCTGTATCTACCTTTGTTTCGAAT-GGACAAA--AGAGCACCC--CTCGAAAGTAAT---ACTCGAGCAATACCAGTAATAATAATCCG------------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
dm3
GAAGAGAG--GA--------TATGGCAATTACAACT-----------------------AA-TTT-----TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTCGA---TCGAAACATCTGTATATACCTTTGTTCCGATT-GGACAAA--AGTGCGTCT-TCTAGTTGG------------------------------------------------TGATACC-----------------------------AATAA---SizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
........................................................................................ACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2416266.006266001005000015400000000001700000000000312321962726212234189500010000000000000000000386101901200132190143737157006131215104118284182301540000000011000000000000000000031717520351525000000000002505000191600021000200342106182000570546000000211000000001442140994661775421723021213700000000010200121266031460000000000000000001005935922711390190001000003418100612254423144320014470000000000092984712124503400
........................................................................................ACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................2315016.005016000004000009000000000014050000000000008200071100210183531000000000000000000000004534060000000310007824722049690020513061210290000301000000000000000000001021084103135140000080000049060003301010600000032762571300015405250000000600000000096006401812943142136081000000001001000002800200000000010100000010003819672663310201000000000110610121627115612871030034311000000000001015326623902010
........................................................................................ACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................2212059.0020590000000000020000000010338500000000000000000110014040122000000000000000000000001002000000000000013002100043400200407300340000000011000000000000000000004105701000000000000021010004000003000000172126230008801960000000100000000012511862791132122200000000000000010700300000000000000100000019106417017270000010000124100261419286374400024300000000000701422201900007
.......................................................................................AACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................241634.006340000000000030000000000020000000000001000123010400040000000000000000000000000100105011000004103601170002000030410160001000000001000000000000000000000141260000000000000003007000711010400000001062591000220535000000000000000032001171180825160000000000000000010020000000000000000000001501050000000000000600000026332500040000000000000020000200000
........................................................................................ACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................211613.0061300000000000100000000000340000000000001000004000000000000000000000000000000000000000001000001007004000002000011111003000000000000000000000000000001100261200000000000000000000200000000001001838200001804800000000000000200321022161531010000000000000000000040000000000000000000007591104921000000010000130010121119216210011510000000000020103020900000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................251415.00415000000000006000000000000000000000001000021121022000110000000000000000000000000010000100000000230020001000000010300000000000000000000000000000010013203130050000000000000000000300000000000002002810001018000000130000000008250191011551931417000000000000000002900700000000000000000000041100020100000000000210002012154000010001000000000040000100000
.......................................................................................AACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................231351.00351000000000005000000000001800000000000010000100001000000000000000000000000000000220020000000000070070000110010030410040000000000000100000000000000000121000400000000000000000004000001000010256060000015062000000000000000001700031800020000000000000000000000000000000000000000000500020000000000100200001007231600111000000000000040200000010
.......................................................................................AACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................221127.001270000010000010000000000010000000000000000000000000001000000000000000000000000000000000000000000000400000000001000000300000000000000000000000000000111001000000000000000000000020000000000000110130000120150000000000000000011211000300000000000000000000000000000000000000000000000300030000000000000100000002141300002000000000001010000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTCT.............................................................................................................................231101.0010100000000000000000000000200000000000000000000000000000000000000000000000000000223201000000000002003000102000003031100001000000000000000000000000000000000000000000000000101000000000000000005090000002000000000000000000200351120035000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTT...............................................................................................................................22189.008900000000000000000000000100000000000000001000000000000000000000000000000000000651200000000000001000000300000000000000000000000000000000000000000000000100000000000000000000000000000000000021030000306000000000000000000200004232005000000000000000000000000000000000000000000030000000000000000000000000040000010000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTT......................................................................................................................................................................24177.007700000000100100000000000000000000000000000030000000000000000000000000000000000000000000000001010000000030000000100000000000000000000000000000000000000000000000000000001000000010000000000090130000201000000000000000000010000060020000000000001000002001000000000000000000000130100010000000000010000100150200000000000000000000000000100
........................................................................................ACAAGGTAAATATCAGGTTG..........................................................................................................................................................................20176.0076000000000000000000000002000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000050150000100400000000000000000051000020000000000000000000001002000000000000000000000020000000000000000000000000112100010000000000000010000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCT.....................................................................................................................................................................25170.007000000000000000000000000000000000000010010010000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000100000010000000000000000001000000000000030190000101400000000000000000020000020000000000000000000001000000000000000000000000060000000000000000000001000280000000000000000000010100000000
.......................................................................................AACAAGGTAAATATCAGGTTG..........................................................................................................................................................................21168.00680000000000000000000000023000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010011000000000000000000000000000000000000407000090800000000000000100150010010000000000000000000000000000000000000000000000010000000000000000000000000100000001000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTT..............................................................................................................................23167.006700000000000200000000000200000000000000000010000000000000000000000000000000008105110000000000000400000000000000006000000000000000000000000000000000000000000000000000000000100000000000000003001000000000000000000000000000000091101000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCA.....................................................................................................................................................................25166.0066000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100700200009000000001000000000000000000000000000000000000000000000000000000000000000000000000000404000010100000000000000000010000000011000061000000000001000000000000000000000000000000010000000000031000000382100000000000000000020100200000
.................................................................................................................................AACATCTGTATATACCTTTGT................................................................................................................................21158.00580000000000000000000000000000000000000000000011100000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000010000200000000000000000002000010000000020120000000000000000000000000100044152014000000000000000000000000000000000000000000141001000000000000000000001020000010000000000000000000000000
..............................................................................................TAAATATCAGGTTGTTTC......................................................................................................................................................................18147.004700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010002100000000000000000000000000000000000020011000010400000000000000000020100000000000000000000000000000000000000000000000000020000000000000000000000000010000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTATC....................................................................................................................................................................26147.004700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................23143.0043000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000100901700000000000004100400000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000001010221000000000000000000000000000000000000000000010100000000000000000000000030000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTA......................................................................................................................................................................24134.00340000000000020000000000000000000000000000000000000000000000000000000000000000000002000000000000002000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001030000004000000000000000000100000000000000103000000000001000000000000000000000000020000000000000000000000000110000000000000000000000000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTCC.............................................................................................................................23134.0034000000000002000000000003000000000000000000000000000000000000000000000000000000000000000000100300200000000300001000000000000100000000000000000000000000000000000000000000000000000000000000101000000000000000000000000030011053011000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................CAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................22127.0027000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000500100000000000003000000000000000000000000000000000000000000000000000000000000000100000000000101000000200000000000000000000000000013000000000000000000000000000000000000000000030000000000000000000000000030000000000000000000000000200000
.............................................................................................GTAAATATCAGGTTGTTTC......................................................................................................................................................................19124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004020000000000000000000000000200000000000000000000000000000000000000000000000000003120001000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTC..............................................................................................................................23118.0018000000000000000000000002000000000000000000000000000000000000000000000000000011100000000000000100000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000100000000000000000000000000000010080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTCT.............................................................................................................................24114.0014000000000001000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001060002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTC.......................................................................................................................................................................23112.0012000000000102000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010100000000000000000000000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTC..............................................................................................................................22111.0011000000000000000000000001000000000000000000000000000000000000000000000000000000100100000000000200100000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTA.......................................................................................................................................................................2319.009000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTATC............................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CAAGGTAAATATCAGGTTGTT........................................................................................................................................................................2118.008000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTT......................................................................................................................................................................2518.008000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000020000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................AACAAGGTAAATATCAGGTT...........................................................................................................................................................................2018.008000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000
.................................................................................................................................AACATCTGTATATACCTTTGTA...............................................................................................................................2218.008000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000020000000000000000000000000000000000000001011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTG.......................................................................................................................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000010200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000010000000000000000000000000000000
..........................................................................................AAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2217.007000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGT............................................................................................................................................................................1817.007000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AGGTAAATATCAGGTTGTTT.......................................................................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000010000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTT...........................................................................................................................................................................1916.006000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTG......................................................................................................................................................................2415.005000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTC........................................................................................................................................................................2215.005000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTCC.............................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................2115.005000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTTC.........................................................................................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGG.............................................................................................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCC.....................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000
.......................................................................................AACAAGGTAAATATCAGGTTGA.........................................................................................................................................................................2213.003000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................AAATATCAGGTTGTTTC......................................................................................................................................................................1713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTCCATC..........................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTGTTCATC...........................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACATCTGTATATACCTTTG.................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTCT.....................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTTT.............................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AACAAGGTAAATATCAGG.............................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGTAAATATCAGGTTGTTT.......................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTAA.....................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTTT.....................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droSim2
GAAGAGAG--GA--------CATGGCAATTACTACT-----------------------GATT-------TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTAGA---TCGAAACATCTGTATATACCTTTGATCCGGTT-GGACAAA--AGTGCATCT-TCTAGTGGGTAAA--------------------------------T-----------------CCATGTGGTTA-----TGACAAGTCAATCAAAATCTTGSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
........................................................................................ACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................241766.007660997712809100022191464000
........................................................................................ACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................231752.0075202003222203210800644000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCC.....................................................................................................................................................................251641.006410000634601000000000
........................................................................................ACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................221464.004642231123924200500185000
........................................................................................ACAAGGTAAATATCAGGT............................................................................................................................................................................181337.003370100326500003002000
........................................................................................ACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................211295.0029508012313011050144000
........................................................................................ACAAGGTAAATATCAGGTTG..........................................................................................................................................................................201194.001940110178500000009000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................251171.001710200158300002006000
........................................................................................ACAAGGTAAATATCAGGTT...........................................................................................................................................................................191105.001050000101200000002000
.......................................................................................AACAAGGTAAATATCAGGT............................................................................................................................................................................19193.0093000091100001000000
.................................................................................................................................AACATCTGTATATACCTTTGAT...............................................................................................................................22182.00821274100651000037000
.......................................................................................AACAAGGTAAATATCAGGTTG..........................................................................................................................................................................21174.0074020069100001001000
.......................................................................................AACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................22172.0072160055310002004000
.......................................................................................AACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................23163.00630300301110040023000
.......................................................................................AACAAGGTAAATATCAGG.............................................................................................................................................................................18150.0050000050000000000000
.................................................................................................................................AACATCTGTATATACCTTTGA................................................................................................................................21147.00472500191000000020000
.......................................................................................AACAAGGTAAATATCAGGTT...........................................................................................................................................................................20141.0041000039000000002000
.......................................................................................AACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................24136.0036020041310050119000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCA.....................................................................................................................................................................25134.0034000000000000034000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTCC.....................................................................................................................................................................26131.0031000030100000000000
.................................................................................................................................AACATCTGTATATACCTTTGATC..............................................................................................................................23127.0027042018001000002000
........................................................................................ACAAGGTAAATATCAGGTTGTTTT......................................................................................................................................................................24126.0026000000000000026000
........................................................................................ACAAGGTAAATATCAGGTTGTTTA......................................................................................................................................................................24117.0017000000100000016000
................................................................................................................................AAACATCTGTATATACCTTTGA................................................................................................................................22112.0012010010000000010000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCT.....................................................................................................................................................................25111.001100000011000009000
........................................................................................ACAAGGTAAATATCAGGTTGTTA.......................................................................................................................................................................23110.001000000010000009000
..................................................................................................................................ACATCTGTATATACCTTTGATC..............................................................................................................................2219.00904000000000005000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTCT.....................................................................................................................................................................2616.00600000000000006000
........................................................................................ACAAGGTAAATATCAGGTTGTTC.......................................................................................................................................................................2315.00500000000001004000
........................................................................................ACAAGGTAAATATCAGGTTGTTAA......................................................................................................................................................................2415.00500000000000005000
.................................................................................................................................AACATCTGTATATACCTTTG.................................................................................................................................2015.00500003010000001000
.............................................................................................GTAAATATCAGGTTGTTTC......................................................................................................................................................................1915.00500000000005000000
.................................................................................................................................AACATCTGTATATACCTT...................................................................................................................................1814.00401003000000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTA.......................................................................................................................................................................2414.00400000000000004000
................................................................................................................................AAACATCTGTATATACCTTTGAT...............................................................................................................................2314.00402000000000002000
........................................................................................ACAAGGTAAATATCAGGTTGTTTAA.....................................................................................................................................................................2514.00400000010000003000
...............................................................................................AAATATCAGGTTGTTTC......................................................................................................................................................................1714.00400000000004000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCAA....................................................................................................................................................................2613.00300000000000003000
.................................................................................................................................AACATCTGTATATACCTTTGATT..............................................................................................................................2313.00300100000000002000
........................................................................................ACAAGGTAAATATCAGGTTGTTTAAA....................................................................................................................................................................2613.00300000000000003000
.........................................................................................CAAGGTAAATATCAGGTTGTTTCC.....................................................................................................................................................................2413.00300003000000000000
..............................................................................................TAAATATCAGGTTGTTTC......................................................................................................................................................................1813.00301000000002000000
.......................................................................................AACAAGGTAAATATCAGGTTGG.........................................................................................................................................................................2213.00303000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCAAA...................................................................................................................................................................2712.00200000000000002000
..............................................................................................TAAATATCAGGTTGTTT.......................................................................................................................................................................1712.00200000002000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTCA.....................................................................................................................................................................2612.00200000011000000000
........................................................................................ACAAGGTAAATATCAGGTTGC.........................................................................................................................................................................2112.00202000000000000000
..................................................................................................................................ACATCTGTATATACCTTTGATCCG............................................................................................................................2412.00200002000000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTAA.....................................................................................................................................................................2612.00200000001000001000
............................................................................................GGTAAATATCAGGTTGTT........................................................................................................................................................................1812.00200000000001001000
.................................................................................................................................AACATCTGTATATACCTTTGAC...............................................................................................................................2212.00202000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCCT....................................................................................................................................................................2612.00200002000000000000
..................................................................................................................................ACATCTGTATATACCTTTGA................................................................................................................................2012.00201000000000001000
........................................................................................ACAAGGTAAATATCAGGTTGTTTG......................................................................................................................................................................2412.00200000000000002000
..................................................................................................................................ACATCTGTATATACCTTTGAT...............................................................................................................................2112.00201000000000001000
.........................................................................................CAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2312.00201000000000001000
..........................................................................................AAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................2112.00200010000000001000
.......................................................................................AACAAGGTAAATATCAGGTTT..........................................................................................................................................................................2111.00100000000000001000
..................................................................................................................................ACATCTGTATATACCTTTGATCA.............................................................................................................................2311.00100000000000001000
...........................................................................................AGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2111.00100000000001000000
........................................................................................ACAAGGTAAATATCAGGTTGTA........................................................................................................................................................................2211.00100000000000001000
.........................................................................................CAAGGTAAATATCAGGTTGTT........................................................................................................................................................................2111.00100000000000001000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTA......................................................................................................................................................................2511.00100000000000001000
.......................................................................................AACAAGGTAAATATCAGGTTGC.........................................................................................................................................................................2211.00101000000000000000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTAAA....................................................................................................................................................................2711.00100000000000010000
........................................................................................ACAAGGTAAATATCAGGTTGTAA.......................................................................................................................................................................2311.00100000000000001000
.......................................................................................AACAAGGTAAATATCAGGTTGA.........................................................................................................................................................................2211.00100000000000001000
..........................................................................................AAGGTAAATATCAGGTTGTTTCAC....................................................................................................................................................................2411.00100000000000001000
.................................................................................................................................AACATCTGTATATACCTTTGG................................................................................................................................2111.00101000000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTCG.....................................................................................................................................................................2511.00100000000000001000
................................................................................................................................AAACATCTGTATATACCTTTGAA...............................................................................................................................2311.00100000000000001000
........................................................................................ACAAGGTAAATATCAGGTTGTTTTAG....................................................................................................................................................................2611.00100000000000001000
.................................................................................................................................AACATCTGTATATACCTTTGAA...............................................................................................................................2211.00100000000000001000
................................................................................................AATATCAGGTTGTTTC......................................................................................................................................................................1611.00100000000001000000
........................................................................................ACAAGGTAAATATCAGG.............................................................................................................................................................................1711.00100000000000001000
.......................................................................................AACAAGGTAAATATCAGGTTGTTTTT.....................................................................................................................................................................2611.00100000000000001000
.................................................................................................................................AACATCTGTATATACCTTT..................................................................................................................................1911.00100001000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTTT.....................................................................................................................................................................2511.00100000000000001000
...............................................................................................AAATATCAGGTTGTTTCC.....................................................................................................................................................................1811.00100001000000000000
........................................................................................ACAAGGTAAATATCAGGTTGTTTTA.....................................................................................................................................................................2511.00100000000000001000
.......................................................................................AACAAGGTAAATATCA...............................................................................................................................................................................1620.50100000000000001000
.................................................................................................................................AACATCTGTATATACCTTAT.................................................................................................................................2020.50100000000000001000
droSec2
GAAGAGAG--GA--------CATGGCAATTACTACT-----------------------GAT-TT-----TTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTAGA---TAGAAACATCTGTATATACCTTTGATCCGGTT-GGACAAA--AGTGCATCT-TCTAGTGGGTAAA--------------------------------T-----------------CCATGTGGTTA-----TGATAAGTCAATCAAAATCTTGSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
........................................................................................ACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................241255.0025551288834
........................................................................................ACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................231139.00139112585
........................................................................................ACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................22123.002302210
.......................................................................................AACAAGGTAAATATCAGGTTGTTT.......................................................................................................................................................................24119.00191981
........................................................................................ACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................21114.001401301
.......................................................................................AACAAGGTAAATATCAGGTTGTT........................................................................................................................................................................23111.001101100
.......................................................................................AACAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2519.0091530
........................................................................................ACAAGGTAAATATCAGGTTGTTTCT.....................................................................................................................................................................2517.0070601
.......................................................................................AACAAGGTAAATATCAGGTTGT.........................................................................................................................................................................2215.0051301
.................................................................................................................................AACATCTGTATATACCTTTGAT...............................................................................................................................2212.0020110
........................................................................................ACAAGGTAAATATCAGGTTGTTC.......................................................................................................................................................................2312.0020101
........................................................................................ACAAGGTAAATATCAGGTT...........................................................................................................................................................................1911.0010010
........................................................................................ACAAGGTAAATATCAGGTTG..........................................................................................................................................................................2011.0010100
.......................................................................................AACAAGGTAAATATCAGGTTGTTTT......................................................................................................................................................................2511.0010100
........................................................................................ACAAGGTAAATATCAGGTTGTTA.......................................................................................................................................................................2311.0010001
.......................................................................................AACAAGGTAAATATCAGGTT...........................................................................................................................................................................2011.0010010
........................................................................................ACAAGGTAAATATCAGGTTT..........................................................................................................................................................................2011.0010100
................................................................................................................................AAACATCTGTATATACCTTTGA................................................................................................................................2211.0010100
.......................................................................................AACAAGGTAAATATCAGGTTGTTTA......................................................................................................................................................................2511.0010010
............................................................................................GGTAAATATCAGGTTGTTTT......................................................................................................................................................................2011.0010100
.......................................................................................AACAAGGTAAATATCAGGTTG..........................................................................................................................................................................2111.0010100
.........................................................................................CAAGGTAAATATCAGGTTGTTTC......................................................................................................................................................................2311.0011000
........................................................................................ACAAGGTAAATATCAGGT............................................................................................................................................................................1811.0010010
droYak3
AGTGGGT--------------------ATCACTACT-----------------------GCATTG-----TTCTTGGTCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTATATTGGATGATCGAAACATCTGTATATACCTTTGTTCCGAAT-GGACGAA--AGAGCATCT-TCAAGTT----------A---------T----------------AT-----------------CC-------TA-----TGATCAATC-----AATGA---SizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
..................................................................................................................................ACATCTGTATATACCTTTGTTCT.............................................................................................................................23157.00574512000000000
..................................................................................................................................ACATCTGTATATACCTTTGTTCC.............................................................................................................................23112.001292100000000
.......................................................................................AACAAGGTACATATCAGGTTGTT........................................................................................................................................................................23112.0012010000110000
.......................................................................................AACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................24112.0012001000110000
.......................................................................................AACAAGGTACATATCAGGTTGT.........................................................................................................................................................................22111.001110000090010
.......................................................................................AACAAGGTACATATCAGGTTG..........................................................................................................................................................................2113.00311000010000
..................................................................................................................................ACATCTGTATATACCTTTGTTC..............................................................................................................................2213.00303000000000
.....................................................................................AAAACAAGGTACATATCAGGTTGTT........................................................................................................................................................................2513.00300000030000
.....................................................................................AAAACAAGGTACATATCAGGTTGT.........................................................................................................................................................................2412.00200000020000
...................................................................................................................................CATCTGTATATACCTTTGTTCCG............................................................................................................................2312.00220000000000
.....................................................................................................................................TCTGTATATACCTTTGTTCT.............................................................................................................................2012.00220000000000
........................................................................................ACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................2312.00201000100000
.................................................................................................................................AACATCTGTATATACCTTTGTTCT.............................................................................................................................2411.00110000000000
........................................................................................ACAAGGTACATATCAGGTTGT.........................................................................................................................................................................2111.00100000010000
.......................................................................................AACAAGGTACATATCAGGTT...........................................................................................................................................................................2011.00100001000000
.......................................................................................AACAAGGTACATATCAGGT............................................................................................................................................................................1911.00100000010000
..................................................................................................................................ACATCTGTATATACCTTTGTTA..............................................................................................................................2211.00101000000000
.....................................................................................AAAACAAGGTACATATCAGGTTG..........................................................................................................................................................................2311.00100000010000
.......................................................................................AACAAGGTACATATCAGGTTGTTTT......................................................................................................................................................................2511.00100000010000
.......................................................................................AACAAGGTACATATCAGGTTGTTTC......................................................................................................................................................................2511.00100000000010
.......................................................................................AACAAGGTACATATCAGGTTGG.........................................................................................................................................................................2211.00110000000000
..................................................................................................................................ACATCTGTATATACCTTTGTT...............................................................................................................................2111.00101000000000
droEre2
TGTGGGC--------------------ATCAGTGCT-----------------------GC-TTG-----TTCTTAGTCTAATCTAAAACAAGGTACATATCAGGTTGTTTCCTGTATTGGATGATCGAAACATCTGTATATACCTTTGTTCCGAAT-GGACGAA--AGAGCATCT-TCTAGTTGG------------------------------------------------TTACATCCT-----------------------------TGC---SizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
.......................................................................................AACAAGGTACATATCAGGTTG..........................................................................................................................................................................211123.00123603094200
.......................................................................................AACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................24174.0074103050200
.......................................................................................AACAAGGTACATATCAGGTTGTT........................................................................................................................................................................23160.0060201045120
.......................................................................................AACAAGGTACATATCAGGTTGT.........................................................................................................................................................................22152.005200105100
........................................................................................ACAAGGTACATATCAGGTTGTT........................................................................................................................................................................22123.002300001940
.....................................................................................AAAACAAGGTACATATCAGGTTGTT........................................................................................................................................................................25117.00170000890
........................................................................................ACAAGGTACATATCAGGTTGTTT.......................................................................................................................................................................23115.001510001040
.....................................................................................AAAACAAGGTACATATCAGGT............................................................................................................................................................................21110.00100010900
........................................................................................ACAAGGTACATATCAGGTTGT.........................................................................................................................................................................2118.0080000620
.......................................................................................AACAAGGTACATATCAGGTTGTTTC......................................................................................................................................................................2517.0070002140
.....................................................................................AAAACAAGGTACATATCAGGTTGT.........................................................................................................................................................................2417.0070000520
..................................................................................................................................ACATCTGTATATACCTTTGTTCT.............................................................................................................................2316.0062010210
.....................................................................................AAAACAAGGTACATATCAGGTTG..........................................................................................................................................................................2314.0040000310
.....................................................................................AAAACAAGGTACATATCAGGTT...........................................................................................................................................................................2213.0030000210
........................................................................................ACAAGGTACATATCAGGTTGTTTC......................................................................................................................................................................2412.0021000100
...................................................................................................................................CATCTGTATATACCTTTGTTCCG............................................................................................................................2312.0020010100
..................................................................................................................................ACATCTGTATATACCTTTGTTCC.............................................................................................................................2312.0020100010
.................................................................................................................................AACATCTGTATATACCTTTGTT...............................................................................................................................2211.0011000000
........................................................................................ACAAGGTACATATCAGGTTGTTC.......................................................................................................................................................................2311.0010000010
.......................................................................................AACAAGGTACATATCAGGTTGTC........................................................................................................................................................................2311.0010000010
..................................................................................................................................ACATCTGTATATACCTTTGTTC..............................................................................................................................2211.0010100000
........................................................................................ACAAGGTACATATCAGGTTG..........................................................................................................................................................................2011.0011000000
.......................................................................................AACAAGGTACATATCAGGTTGTTTT......................................................................................................................................................................2511.0010000100
...................................................................................................................................CATCTGTATATACCTTTGTTCC.............................................................................................................................2211.0010000100
..................................................................................................................................ACATCTGTATATACCTTTG.................................................................................................................................1911.0011000000

Generated: 10/20/2015 at 11:22 PM