ID:

dgr_5

 Coordinate:

scaffold_14906:1491754-1491813 -

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.0

Flybase annnotation

intron [Dgri\GH18714-in]

No Repeatable elements found

mature
  1. dgr_1  scaffold_8129:811-832 -
  2. dgr_5  scaffold_14906:1491755-1491776 -
star
  1. dgr_1  scaffold_8129:848-869 -
  2. dgr_5  scaffold_14906:1491792-1491813 -

Sense Strand Reads

CCAGCCCACAATGGATAAGGACAAGAGACAGCAGTCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTTTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACAAGCGATGACCACCCAAAACGAAAGCCAA
***********************************.((((((((((((.(((((((((.((((((.(((((((...........))))))).)))))).))))))))).)))))))))..))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V109
male body		 M041
female body
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................... 22 0 2 1880.00 3760 2305 1455
........................................................................................GTTAACTGTAAGACTGTGTCT................................................... 21 0 2 89.00 178 8 170
.......................................................................................TGTTAACTGTGAGACTGTGTCT................................................... 22 1 2 65.00 130 80 50
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................... 21 0 2 56.00 112 82 30
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................... 20 0 2 47.00 94 70 24
.......................................................................................TGTTAACTGTAAGACTGTGTCTT.................................................. 23 0 2 23.00 46 33 13
.......................................................................................TGTTAACTGTAAGACTGCGTCT................................................... 22 1 2 13.00 26 26 0
.......................................................................................TGTTAACTGTAAGACTGAGTCT................................................... 22 1 2 13.00 26 26 0
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................... 22 1 2 6.50 13 12 1
..................................................ACATAGTCGTACGGTGAATGTT........................................................................................ 22 0 2 6.00 12 2 10
.......................................................................................TGTTAACTCTAAGACTGTGTCT................................................... 22 1 2 5.50 11 11 0
.........................................................................................TTAACTGTAAGACTGTGTCT................................................... 20 0 2 5.50 11 2 9
.......................................................................................TGTTAAATGTAAGACTGTGTCT................................................... 22 1 2 5.50 11 10 1
.......................................................................................TGTTAACTGTAAGACTGGGTCT................................................... 22 1 2 5.00 10 9 1
.......................................................................................TGTTAACTGTAAGACTGTGTCTA.................................................. 23 1 2 5.00 10 9 1
.......................................................................................TGTTACCTGTAAGACTGTGTCT................................................... 22 1 2 4.50 9 9 0
.......................................................................................TGTTAACTGTAAGACTGTGCCT................................................... 22 1 2 4.50 9 7 2
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................... 23 0 2 4.00 8 4 4
.......................................................................................TGTTAGCTGTAAGACTGTGTCT................................................... 22 1 2 3.50 7 6 1
.......................................................................................TGTTAACTATAAGACTGTGTCT................................................... 22 1 2 3.50 7 7 0
........................................................................................GTTAACTGTGAGACTGTGTCT................................................... 21 1 2 3.50 7 0 7
.......................................................................................TGATAACTGTAAGACTGTGTCT................................................... 22 1 2 3.50 7 7 0
.......................................................................................TGCTAACTGTAAGACTGTGTCT................................................... 22 1 2 3.00 6 6 0
........................................................................................TTTAACTGTAAGACTGTGTCT................................................... 21 1 2 3.00 6 6 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT................................................. 24 1 2 3.00 6 6 0
.......................................................................................TGTTAACTGTAAGACTGTCT..................................................... 20 1 2 3.00 6 4 2
.......................................................................................TGTCAACTGTAAGACTGTGTCT................................................... 22 1 2 2.50 5 5 0
.......................................................................................TGTTAACTGTAAGACTGTTTCT................................................... 22 1 2 2.50 5 4 1
.......................................................................................TGTTAATTGTAAGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTAACTGTAGGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTATCTGTAAGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAACTTTAAGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAACTGCAAGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTAACTGTAAGACTGTCTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAACTGTACGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
...............................CAGTCGCTCAATTACCATG.............................................................................................................. 19 0 2 2.00 4 0 4
.......................................................................................TGTTAACTGTGGGACTGTGTCT................................................... 22 2 2 1.50 3 2 1
..................................................ACATAGTCGTACGGTGAATGTTG....................................................................................... 23 0 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTC.................................................. 23 1 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAAGGCTGTGTCT................................................... 22 1 2 1.50 3 2 1
.......................................................................................TGTTAACTGTGAGACTGAGTCT................................................... 22 2 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAAGACTTTGTCT................................................... 22 1 2 1.50 3 2 1
........................................................................................GTTAACTGTAAGACTGTGTC.................................................... 20 0 2 1.50 3 0 3
.......................................................................................TGTTGACTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 2 1
.......................................................................................CGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAAGACTATGTCT................................................... 22 1 2 1.50 3 3 0
.......................................................................................TGTTAAGTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 3 0
.......................................................................................AGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGCTAATTGTAAGACTGTGTCT................................................... 22 2 2 1.00 2 2 0
........................................................................................GTTAACTGTAAGACTGTGT..................................................... 19 0 2 1.00 2 0 2
.......................................................................................TGGTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTGACTGTGAGACTGTGTCT................................................... 22 2 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTG.................................................. 23 1 2 1.00 2 0 2
.......................................................................................TGTTAACTGTAAGACTGTGTCTCC................................................. 24 2 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAACACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGGGTC.................................................... 21 1 2 1.00 2 2 0
.......................................................................................TGCTAACTGTAAGACTGTGTC.................................................... 21 1 2 1.00 2 2 0
........................................................................................GTTAACTGTGGGACTGTGTCT................................................... 21 2 2 1.00 2 0 2
.........................................................................................TTAACTGTAAGACTGTGTCC................................................... 20 1 2 1.00 2 1 1
.......................................................................................TGTTAACTGTAAGACCGTGTCT................................................... 22 1 2 1.00 2 1 1
.......................................................................................TGTTAACTGTAAGACTGTGTAT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGCCTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TCTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGGTAACTGTAAGACTCTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGGGTCTT.................................................. 23 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGCGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTCTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTTCT.................................................. 23 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGCAAGACTGTGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTCACTGTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTAACTATAAGACTGTGTCTT.................................................. 23 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGAGTCT................................................... 21 1 2 0.50 1 0 1
.......................................................................................TGTAAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTCTGTCT................................................... 22 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTATCT................................................... 21 1 2 0.50 1 0 1
......................................................................................ATGTTAACTGTAAGACTGTGCCT................................................... 23 1 2 0.50 1 1 0
.......................................................................................TGTTGACTGTAAGACTGGGTCT................................................... 22 2 2 0.50 1 1 0
......................................................................................ATGTTAACTGTGAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TTTTAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGCAAGACTGTGTCC................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACGGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTGTCTGGGTG.............................................. 27 2 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAATACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTCAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................... 22 1 2 0.50 1 0 1
..............................GCAGTCGCTCAATTACCATG.............................................................................................................. 20 0 2 0.50 1 0 1
.......................................................................................TGTTAAATGTAAGACTGTGTCTT.................................................. 23 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTGTCTGC................................................. 23 2 2 0.50 1 0 1
........................................................................................GTTGACTGTGAGACTGTGTCT................................................... 21 2 2 0.50 1 1 0
.......................................................................................TGTTTACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
........................................................................................TGTAACTGTAAGACTGTGTCT................................................... 21 2 2 0.50 1 1 0
.......................................................................................TCTTAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTCTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTTTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGTCTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGAGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................GGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACCGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTACCTGTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTCAGACTGTGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGCGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTCACTGTAAGACTGCGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGATACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTGTCTTAG................................................ 25 2 2 0.50 1 0 1
..................................................ACATAGTCGTACGGTGAATG.......................................................................................... 20 0 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGACTGAGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTACA................................................ 25 3 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAAACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGAATGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGCTAACTGTAAGACTGTCT..................................................... 20 2 2 0.50 1 1 0
.......................................................................................TGCTAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGT....................................................... 18 0 2 0.50 1 0 1
.......................................................................................TGATAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTGT................................................... 22 1 2 0.50 1 0 1
.......................................................................................TGTTAACAGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGGCTGTGT..................................................... 20 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTGCCT................................................... 21 1 2 0.50 1 0 1
......................................................................................CTGTTAACTGTAAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCC................................................ 25 3 2 0.50 1 1 0
..................................................ACATACTCGTACGGTGAATGTT........................................................................................ 22 1 2 0.50 1 1 0
......................................................................................TTGTTAACTGTAAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA................................................ 25 2 2 0.50 1 0 1
................................................................................AATCTAGTGTTAACTGTAAGACTGTGTCT................................................... 29 3 2 0.50 1 0 1
.......................................................................................TGTTAACTGTGAGACTGTGT..................................................... 20 1 3 0.33 1 1 0
.......................................................................................TGCTAACTGTGGGACTGTGTCT................................................... 22 3 4 0.25 1 1 0
.......................................................................................TGTTGACTGTGGGACTGTGTCT................................................... 22 3 5 0.20 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTC...................................................... 19 2 6 0.17 1 1 0

Anti-sense strand reads

GGTCGGGTGTTACCTATTCCTGTTCTCTGTCGTCAGCGAGTTAATGGTACTGTATCAGCATGCCACTTACAACACAAACCTCAGGTTACAATTGACATTCTGACACAGAACCACCAACGGTCGGTTCGTTGTTCGCTACTGGTGGGTTTTGCTTTCGGTT
************************************.((((((((((((.(((((((((.((((((.(((((((...........))))))).)))))).))))))))).)))))))))..))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14906:1491704-1491863 - dgr_5 CCA--GCCCACAATGG------------------------------------A-------TAA--GGA-C-----------------AAG-------AGACA-GCA--G-TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCC----AAGCAACAAGC-GA------------TGAC--CACCCAAAACGAAAGCCAA-----------
droVir3 scaffold_12822:3936707-3936858 - dvi-mir-999 G--------------G------------------------------------A-------TAA--GGA-C---------------------------AGCGA-GTC--G-CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCT----AATCAACAG-C-GACACATGAGACGCTGACGG------AAACGCAAGTGAA-----------
droMoj3 scaffold_6540:17209612-17209772 - dmo_1 GCT--GGCAGC---------------------------------------------ATTAAAAGG---GC---------------------------AGTGA-GTC--G-CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTG-CAGCC----AAACAACAG-C-GACCCCCAAAACACTTTGAC------AAACGGATGTGGA-----------
droWil2 scf2_1100000004943:11672692-11672871 - dwi_2 ACGCCGCCGACAAC-GAAAAGGACGACGACGACGACGACGCC----A---------ACGACA------GC---------------------------AGCAAAGATGTC-CCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----AAACAACAATA-----------------------G-----------CTGGAACTCCAATCAA
dp5 2:6480682-6480794 - dps_134 -------------------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC----AAGCAGCAAGCCGAAC--CGAACCGC-------------ACCGGAAGTGGAAGTGT------
droPer2 scaffold_0:305992-306159 - dpe_7 CCGCCGCCGC----------------------AGCCGCCGCCAGGAGATGT--------GAAGGA---GC---------------------------CCAAAGGAT--GCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC----AAGCAGCAAGCCGAAC--C------------G------AACCGGAAGTGGA-----------
droAna3 scaffold_13340:8622510-8622625 - dan_3 A--------------------------------------------------------AGGAC------CA---------------------------AAAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----AGCCTAC-------------------------------------------------------
droBip1 scf7180000396708:225024-225139 + A--------------------------------------------------------AGGAC------CT---------------------------AAAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----AGCCTAC-------------------------------------------------------
droKik1 scf7180000302388:1458229-1458369 + CCGTCGCCGC----------------------CGCCGCCGCC----GCTGT------CGCAG------GA---------------------------ATAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------
droFic1 scf7180000454106:760385-760536 - CCGCCG--------------------------------------------------ACGAACGGA---GAATGGAAAAAGTAGAAAG--GAGAGAGGAGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CATCAACAA-----------------------------------------------------
droEle1 scf7180000491212:2051749-2051863 - A--------------------------------------------------------AG---------------------------------------AAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCCCAGCAATA------------------------------------------------------
droRho1 scf7180000767858:1766-1903 + CCGTCGCCGC----------------------CGCCGCCGCC----G---------ATGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------
droBia1 scf7180000302402:6491246-6491371 + CCGCCGTCG-----------------------------------------------ACGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------
droTak1 scf7180000415711:1522738-1522861 + CCGCCG--------------------------------------------------ACGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----CAGCAACAA-----------------------------------------------------
droEug1 scf7180000409490:921833-921968 - CCGCTGCCGT----------------------CGCC---GCC----C---------ATGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACAA-----------------------------------------------------
dm3 chr3R:17623948-17624091 - dme-mir-999 CCGCCGCCGC----------------------CGACGCT----------GTAGCCGATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------
droSim2 3r:17135830-17135970 - dsi-mir-999 CCGCCGCCGC----------------------CACTGTAGCC----G---------ATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------
droSec2 scaffold_0:17996316-17996462 - dse_7 CCGCCGCCGC----------------------CGCCGCCACT-------GTAGTCGATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------
droYak3 3R:18443919-18444063 - dya_4 CCGCTG--------------------------------------------------A--AATCGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACACCAGCCACAT-----------------------CAGCC--------------ACATCGGCCAC
droEre2 scaffold_4820:10463182-10463339 + der_3 CCGCCGCCGC----------------------CGCCGCCGCC----G---------ATGAACGAA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACAC-----------------------CAGCC--------------ACACCAGCCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CCA--GCCCACAATGG------------------------------------A-------TAA--GGA-C-----------------AAG-------AGACA-GCA--G-TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCC----AAGCAACAAGC-GA------------TGAC--CACCCAAAACGAAAGCCAA-----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................2221880.00376014552305
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................21289.001781708
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................21256.001123082
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................20247.00942470
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................23223.00461333
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................2226.5013112
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................2226.0012102
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................2025.501192
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................2325.001019
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2324.00844
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................2423.00606
........................................................................................................CA--G-TCGCTCAATTACCATG.............................................................................................................................................1922.00440
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................2321.50303
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................2321.50303
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................2021.50330
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................1921.00220
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................2321.00220
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC...............................................................................2421.00202
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................2021.00211
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................2220.50110
.......................................................................................................GCA--G-TCGCTCAATTACCATG.............................................................................................................................................2020.50110
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTGC...............................................................................2320.50110
..............................................................................................................................ACATAGTCGTACGGTGAATG.........................................................................................................................2020.50110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTACA..............................................................................2520.50110
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................1820.50110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC..............................................................................2520.50101
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA..............................................................................2520.50110
droVir3
G--------------G------------------------------------A-------TAA--GGA-C---------------------------AGCGA-GTC--G-CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCT----AATCAACAG-C-GACACATGAGACGCTGACGG------AAACGCAAGTGAA-----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221153248.001532481453510317312949449942013767011034837396429190713272714143349310791150525494920117711367807242034169112431447564162090732170016458839124097024751103916753518104882176714429071767137182510858445153483075717830431439541276
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................2218928.0089281256499122000571028710322201001431146310141512102852817911310000000000011010001522970
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................2314094.004094215441601217432374471558751032520140110031821448622515525221239147111532202781971931410000000000000000019126130
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2112669.0026692484377217926232221389517292818113120133814243915243927565735853627294519261539167429761331413710453204510246640
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2312321.0023213776428562412118146471141562653924144820119306079565210010930318354212416276478111020201001010011002470211580
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................2211674.001674571540000000000001000000000000111010000000114100222020042102082001460
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................2411207.001207008018540142423969310100002004639296928651149215412322779994000000000000000000033320
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................2011121.001121127163238818149031430144215624177387831155113974251413459000000001000000000004162420
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111011.0010117687419105010113166631362313334242247273411041111011010000000021521260
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................231942.0094215481153701965891312394101643141551367347322135421100110126288323104301079320
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................251689.006890018010010080112250000010001836176519220254128751683189300000000000000000003000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201463.00463937840202100100100100011111100010000000001101000000000000063000630
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221301.00301199115014210005421021113181272295241124015181817193001000010010000000151960
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................221270.00270261713212170300000245711975813772776231001200164000000111001002110421740
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................231200.0020010406149105202123001113016114418710223100011324000000000000000000061120
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................241145.001450550105335003221141012323198333370373351000000000000000000019780
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................191127.0012703300103061000110200500000121016122606010009001000102000000001301000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC...............................................................................24182.0082914019100000000000001100201021102110300003900000000000000000000020
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................23166.00662570700000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC...............................................................................24162.00622221121002001000000070131000103390300000600100000000000000000100
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................20161.00611570300000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23152.0052012020502010000000003007111012011023034000000000000000000000900
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19147.004711911020100100103000000022100000000000010000000000000000001000100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA..............................................................................25146.00460020000000000000000000100252000070361062000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................23143.0043002010000000000000000002335203001024554000000000000000000001000
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................23138.0038001100112000004011230120011010100111010000000000000000000000820
....................................................................................................................................................................TGTTAACTGTAAGACTG......................................................................................17135.00350000000000000000000000000000000000000000011212021131003302120000
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18134.00340137010300000001000000001001000000011010000000000000000001000210
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT...............................................................................24128.0028000010200000000000001001321003001021522000000000000000000001000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA...............................................................................24123.0023000001100001100000001001101100000004303200000000000000000002000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................23122.0022000000001000100000003003011010010023310000000000000000000000100
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22121.00210120200000000000101000000000000000000000000000000000000000000500
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18119.0019060000100000010000000010100121000001000100000000000000000000300
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG.................................................................................23118.00180180000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................20116.00160130200000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT..............................................................................25115.0015001000100000000001000021011400000101000000000000000000000000100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA...............................................................................24114.0014001100000000000000000000011000000020100000012110000000000011000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21114.0014193100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCAA..............................................................................25114.0014000000000000100000000000000110002013112000000000000000000001000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCG.................................................................................20112.00120120000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTA..............................................................................25111.0011000000001000000000000000011000001023100000000000000000000001000
........................................................................................................TC--G-CCGCTCAATTACCGTG.............................................................................................................................................19110.0010010000000000001000000000001110010000000100000001000010000001000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................2019.009006100000000000000100000000000000000000000000000000000000000100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC..............................................................................2518.008400001000000000000001000000001000000000000000000000000000000010
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................2118.008004000100000000000000000001000000000000000000000000000000011000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................2218.008005000001000100000000000000000000000000000000000000000000000100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGG...................................................................................2018.008080000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA...............................................................................2427.5015002000000000000000000002000000002000702000000000000000000000000
.......................................................................................................GTC--G-CCGCTCAATTACCGTG.............................................................................................................................................2017.007130100000000000000000000000000000000000000000000100000000001000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA................................................................................2417.007000000300000010000000000010000000000100000000000000000000001000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................2217.007002000000010120000000000000000000000001000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................2117.007000200100000000000000000000010110001000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................2117.007000000000000010001000000000000000001000000000000000000000000310
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTCC..............................................................................2516.006010000000000000000000000000002020000000100000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGC...................................................................................2016.006030000000000000000001000000001000000000000000000000000000000100
..............................................................................................................................ACATAGTCGTACGGTGAATGTTGTG....................................................................................................................2515.005000000000000000000000000000300000001000000000000000000000000100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTGA...............................................................................2415.005000000000100110000000000000000000000200000000000000000000000000
droMoj3
GCT--GGCAGC---------------------------------------------ATTAAAAGG---GC---------------------------AGTGA-GTC--G-CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTG-CAGCC----AAACAACAG-C-GACCCCCAAAACACTTTGAC------AAACGGATGTGGA-----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................22172344.00723441316820481064218663213746449
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................2215784.0057841821526571310
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111394.00139412621119273837
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2111178.001178799160305510115
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................231996.0099688802724533469
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................201515.00515175143271772
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................221312.003122812172720424
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231262.00262735636461338
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................231177.0017737820374530
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................231125.0012518418383116
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................20196.009666034167
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24168.006805193806
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................22163.0063152816175
........................................................................................................TC--G-CCGCTCAATTACCGTG.............................................................................................................................................19157.0057191466120
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23150.005080132513
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24143.004313160239
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19132.00327171421
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19130.00301602372
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................25125.00251800007
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................21120.0020701291
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................20116.00160000160
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21115.00151000122
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20113.00131000111
..............................................................................................................................ACATAGTCGTACGGTGAATGTC.......................................................................................................................22113.00130000130
.........................................................................................................C--G-CCGCTCAATTACCGTG.............................................................................................................................................18112.0012602040
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18112.0012600051
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22111.0011102521
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................2219.009900000
..............................................................................................................................ACATAGTCGTACGGTGAATG.........................................................................................................................2017.007200113
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC.................................................................................2217.007010060
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC.................................................................................2217.007000250
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................2016.006100050
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................2216.006600000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................2315.005000050
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTAA...............................................................................2315.005500000
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................1815.005002300
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC...............................................................................2414.004010102
.......................................................................................................GTC--G-CCGCTCAATTACCGTG.............................................................................................................................................2014.004020110
droWil2
ACGCCGCCGACAAC-GAAAAGGACGACGACGACGACGACGCC----A---------ACGACA------GC---------------------------AGCAAAGATGTC-CCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----AAACAACAATA-----------------------G-----------CTGGAACTCCAATCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221482108.00482108354576914074671599494931
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................22131935.003193531701281749140
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................2215759.00575957480236
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2114948.004948396968107179625
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................2013791.003791357272817122
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2311888.00188841130452371165
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111631.0016313718831924334
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2311033.00103377591684149
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231848.008481054922345327
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................201509.005095297761310
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................221433.00433188144122105
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................201342.003423420000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................191321.00321248103258
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................181203.0020314343548
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221104.0010438101946
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................20188.0088880000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................23180.0080790010
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24177.0077604859
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24167.0067051601
......................................................................................................................................................................TTAACTGTAAGACTGTGTCG.................................................................................20166.0066651000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23137.00371610515
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................25130.0030072210
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21128.0028271000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCC.................................................................................19128.0028280000
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18124.0024184110
......................................................................................................................................................................TTAACTGTAAGACTGTGTC..................................................................................19121.0021190002
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG.................................................................................23118.0018180000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22118.001819026
....................................................................................................................................................................TGTTAACTGTAAGACTGTCG...................................................................................20118.0018180000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23117.0017420011
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22117.0017100034
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19116.001661117
........................................................................................................................................................................AACTGTAAGACTGTGTCC.................................................................................18114.0014131000
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................21114.001444222
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGG.................................................................................22113.0013130000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC.................................................................................22113.0013130000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGG...................................................................................20112.0012110001
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................23111.001100083
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................2019.00926001
....................................................................................................................................................................TGTTAACTGTAAGACTGTC....................................................................................1918.00850111
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT................................................................................2317.00740201
..................................................................................................................................................................AATGTTAACTGTAAGACTGTGTCT.................................................................................2416.00660000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT................................................................................2316.00600015
.......................................................................................................................................................................TAACTGTAAGACTGTGTCG.................................................................................1916.00660000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................2116.00610005
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC.................................................................................2215.00550000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAA.................................................................................2215.00520210
.......................................................................................................................................................................TAACTGTAAGACTGTGTC..................................................................................1815.00550000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT...............................................................................2415.00510013
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTC.................................................................................2215.00550000
dp5
-------------------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC----AAGCAGCAAGCCGAAC--CGAACCGC-------------ACCGGAAGTGGAAGTGT------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................22182830.0082830717258473778209623464153493359267813815295
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2118683.008683711991232134813212565266737541700
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................2216526.0065263417510894997164222597220
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................2013474.003474790258734616587246420570
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2112643.002643424617601641277416
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................231450.00450019741229705333448
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................191346.003460750122241017161
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221321.00321015351410191358445
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................231245.00245541995652191512
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231241.002410135023721152380
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201217.002174181017246003
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................201201.00201018603123006
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................19168.006806600100001
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23155.005508578710163
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24149.0049028001400700
....................................................................................................................................................................TGTTAACTGTAAGACTGTGC...................................................................................20145.004501040111010
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21144.0044126214001000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19137.003703001311010
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................21136.003608000312193
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................25130.003012010200600
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22124.002402400000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................23123.002300419000000
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18122.002201605100000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22122.00221321132360
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24122.00220600136150
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCA.................................................................................21117.001701600000100
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18116.00160500011261
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................21115.00150206100042
....................................................................................................................................................................TGTTAACTGTAAGACT.......................................................................................16112.00120000000507
......................................................................................................................................................................TTAACTGTAAGACTGTGTC..................................................................................19111.00110800001011
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................20111.001101010000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................22111.001101100000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................23111.00110900000110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23111.001101100000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTG....................................................................................18110.00100900000001
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................2219.0090403010010
....................................................................................................................................................................TGTTAACTGTAAGACTGTGA...................................................................................2018.0080201030011
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................2017.0070115000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................2117.0070001022110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAA.................................................................................2216.0060400000200
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA...............................................................................2416.0060600000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT..............................................................................2515.0050000000050
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC.................................................................................2215.0050023000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................2315.0050200120000
......................................................................................................................................................................TTAACTGTAAGACTGTGT...................................................................................1814.0040300000001
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA..............................................................................2514.0040200000020
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC.................................................................................2214.0040004000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT................................................................................2314.0040102001000
...............................................................................................................................CATAGTCGTACGGTGAATGTT.......................................................................................................................2114.0040300010000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCAA................................................................................2214.0040400000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA...............................................................................2414.0040010000021
....................................................................................................................................................................TGTTAACTGTAAGACTGTT....................................................................................1913.0030200010000
droPer2
CCGCCGCCGC----------------------AGCCGCCGCCAGGAGATGT--------GAAGGA---GC---------------------------CCAAAGGAT--GCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC----AAGCAGCAAGCCGAAC--C------------G------AACCGGAAGTGGA-----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................22150473.005047369954956116115536160155810
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2114470.0044703153494512681944549
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................2013077.0030779154115831385935
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................221737.00737520438487345
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................211676.00676124924503484
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................221338.003381417312916015
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................231327.00327624149110785
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................231214.0021438116459024
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................221209.0020918491681
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221152.001522462286212
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231134.0013411472518267
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201133.00133793601044
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19159.005901208345
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20140.00400290137
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23134.00340304261
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18134.00342160232
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................23133.00330008223
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18127.00271641213
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19123.0023761522
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24123.00230149000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................19123.00230170114
....................................................................................................................................................................TGTTAACTGTAAGACTGTGC...................................................................................20115.00152001102
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................25114.0014275000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24111.0011100424
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................21110.0010000451
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................2119.009020151
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................2318.008070010
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................2017.007700000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................2317.007020140
....................................................................................................................................................................TGTTAACTGTAAGACTGTGA...................................................................................2017.007000421
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................2116.006000213
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................2115.005010130
....................................................................................................................................................................TGTTAACTGTAAGACTGTC....................................................................................1915.005210002
......................................................................................................................................................................TTAACTGTAAGACTGTGTC..................................................................................1915.005120011
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................2215.005050000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................2214.004030010
......................................................................................................................................................................TTAACTGTAAGACTGTGT...................................................................................1814.004020002
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................2314.004031000
droAna3
A--------------------------------------------------------AGGAC------CA---------------------------AAAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----AGCCTAC-------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................22191653.009165336182745461153491072658754
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2315606.00560610523498127123905
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2111066.00106639944190153586
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................2411060.001060712134183733
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................2211012.001012129111241351
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................211956.0095634614150173372
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231596.0059610241885151272
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................201572.00572103212680351
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................231517.0051781006146392
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201131.00131321132866
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................22197.00977111401226
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT..............................................................................25154.0054500251311
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22151.005111012334
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24144.00442429126
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19139.00396203820
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................22136.0036862947
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23132.00322008418
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23125.00251111633
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22124.00248001213
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTTT...............................................................................23122.00221000219
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18118.00182100411
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20114.0014101165
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18114.0014020309
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC...............................................................................24112.0012010155
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19112.0012100533
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................21111.0011130115
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................23111.0011200414
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................2119.009000036
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................2519.009017010
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................2118.008250001
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................1917.007000142
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT................................................................................2317.007000313
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA...............................................................................2417.007061000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................2117.007100312
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT...............................................................................2416.006100005
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT................................................................................2316.006000015
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................2216.006100113
......................................................................................................................................................................TTAACTGTAAGACTGTGTCTT................................................................................2115.005200003
....................................................................................................................................................................TGTTAACTGTAAGACTGTTCT..................................................................................2154.20211000218
...................................................................................................................................................TGTGTATTGGAAAGCAATGTTAACT...............................................................................................2514.004010111
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC...............................................................................2414.004003100
droBip1
A--------------------------------------------------------AGGAC------CT---------------------------AAAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----AGCCTAC-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCGTCGCCGC----------------------CGCCGCCGCC----GCTGT------CGCAG------GA---------------------------ATAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCGCCG--------------------------------------------------ACGAACGGA---GAATGGAAAAAGTAGAAAG--GAGAGAGGAGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CATCAACAA-----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
A--------------------------------------------------------AG---------------------------------------AAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCCCAGCAATA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCGTCGCCGC----------------------CGCCGCCGCC----G---------ATGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCGCCGTCG-----------------------------------------------ACGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCGCCG--------------------------------------------------ACGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT----CAGCAACAA-----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CCGCTGCCGT----------------------CGCC---GCC----C---------ATGAAC------GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCAACAA-----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CCGCCGCCGC----------------------CGACGCT----------GTAGCCGATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................2211396801.00139680100002841172371983549061537125606112052642012970111026670016587206067783237947637745627196799122332318240951431368894814544611991781556651661000000000000000000833823665593926231261662131082233405030234144125390240923862748291492941053589155301483534114205633201151237426750013239649511845303434363604174812568206665122268672000195181101029910231296818466834156512342179108617989521278138847663551851918224730285017792710722675330625022389251123529023333757178523008778168110853037046066067381808637839911167953812122764711151883167144237822733495003371005123513529901952235976411111172844219479151911510982445095162495091516392290168001782141523105376509469551385681546312491380332439121526155419861926180661810632584154288520131737331387311432396128971073639525861440029571514126451652020521417676757462261174731333800847659455194774260902008120842122612394320741018861447369771558737961964220817756966097815556130184841613977516336498668971138861754096100771128106352211681580374871274698251066195913870228973531814026
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................23132602.0032602000000100000000100100792110570000000038159744184584924654929903938218000000000000000000000002210190001011000204403001080101010313004113450180161593113313150000312000011930320729514112184240719429106608133000000002002529016201828221055151002013084111063211732051146211000008835500300091676732181846174543774432108200059035000109033547712454123747315915720515458484516820656356932834972530516314212572976427211359323307332205394936221973677246531063156241101366685616651967538837719451782849726223160527338410583027566225161391030
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................21126690.002669000004000010000010302020442130434102128271201690149617822347771210720373414419005110000000000000000028421827110002120037043601000076011432001000133190779170117051520473010359164116000014000020385986172527194437173449831852201341332375243317013418104822032292271854721873271541602293735424640015025304821920113501200025311737752592986374110160101451921331357510526210017302541122211192721794383512162091622094181335218398309223141311593976131510156387519918722406994093775310461459621511544721593431001172457125125625135323153648810183466911515856339917141252619917817610316912747889282080
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................23124983.0024983000000000000000100400611530423000000001223101511218451413162314454073101401500000000000000000000022550100000100010010000005000100010100001220090212815122944226000003000042766244222730494732674151722901000106700851050633056727651913184120202201682326421000014345340000125270000001924129377346181219111886421884170028594323002328053173416076261272593087195141933383098712393521458212415441843232278935211517961197448342984017223506525895696822950773771582073872123292689023430247338613423132071811239954118341736120215162163141422823411320115515724061969510
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTATC..............................................................................25121859.002185900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140107849000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................22121698.002169800002000000010000002045136009000000001815161820125401161513122476722017010000000000000000000003040223261020163101701455001019011540321200102814080894201442218000004000012416334236250867589233570762911283118856482046666052223237137046148304265014912101137900016114581101040950000002520225586253030511830328335818513925941655364001060223012132491438311146814235246514312227913947696181262161245281149924915422541634105526314319317312620523775495145504469303895841161746714323366309820718526558255391122213259851385135330265692001692922823240
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................21119448.00194480000000000000001000201503021504613188290120911611249115461041015131042600000000000000000000026352531202001310001100120100003816466432100104136632360433417121061513012800000300001123920111426222816222572831022169028192219454472029664763391520781465221001115292320310783002061807170514000000176192731414916291960104583021706044210043172565427518183126102611319613752153111558424363114658925333262212389912683897658674691728976361441402221692229093105741072776291102402871238811929161294993711192432982201091703981911323142989749876811899101569170145961345
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................23115148.0015148000032000000000000040100100201699980123547204332510591025420410010000000000000000002815710011000301105111111251141017811001111459331170281879211015100000010000411414071113189141371033650211004001562240151004911761121169026420212101703596000306101819018118150000001115314235131052340921025139116200230001521027113712997012364012031518275135222910111221337265752314417125342412414017643972766885174591412331224911336264215647174258463173236102830334939537758212917192526498223401074911480123511774459927
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................20110714.0010714000010000000000500000021905141923286880522912211217523422310340100660000000000000000008101211000000000000005110000110000000000000109122457056139709740156742000000000047171855645816811184105007761107614506347252010233852885308848030720901253012700412326020002400420013191010171038101569913639221222800005304704760201634228425353912546810185925146931894105715131118147891731373281344564521058331148163020291363113814143156667383719113715388931811020986034394759521542914660
..............................................................................................................................ACATAGTCATACGGTGAATGTT.......................................................................................................................2214914.00491400008001121011001002020020200145477001334110912120751827100008830000000000000000076613953129155171912520421651841217352623212645584130312848026140150641302151200200000002120062018422622610115000007057346201511611801270079245717441014935280076566000106400000200030007941182436411423524158133162005900002616045101197541010311882131161043191741642912915762192828310241319213263530522772241349416881451213920220145941111620232314221113925397373548412951131030
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................2414350.00435000000000000000000000011100000000000034166311612516341442200000000000000000000000000000000010000000000100000000000000000301000011100001000000000029885756172376010402111700000000000002501000300160300002039231215000502150000029670000000002120524891628000001002101000104404100106100000010100000143654874069068198602000231271262621064449363117707110011229333010221011002038921861455004010
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................2213137.003137000012003011100000030010010150000000011412083004005972101000000000000000000000363440000200300800200000010100100000100001330301121201011770000010000110201553387163759010001200210292702203112902402103520060043414590006051000000161700000010044281610256311711447007211300220481101333151100116022114101113111054178281663519420148060227685911224141418123349263823713171112255860742181101232627215272012288018050
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC...............................................................................2412123.002123000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000010000000000001000010000000000000300000000000000000000000000000000000000000001327766000000000100100101000000000000000000010001000000011000000001100000000000000000000000100210005110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................2511910.0019100000000000000000000000100000000000002110100124105004130200000000000000000000000000101800200000000000000000000000000000000000000000000000000000444292871503911803010000000000000000000000000010000001721720000180000010790000000001021641291735727000000000100000001000000000000000000000000392754017857351714010003110132000421127245201010078513700000000000100718115000000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................2011234.001234000000000000000000000000000110000000001000010000020200000000000000000000000000012000000010001000000001100100000000000010000000102100000000000100002011000000000020380134712018010844981104004900600000000004000000000000010101015161410558100110001000020001200711103200130100300111157451832011352602736294770562630010232371131111014116637229142336741181837140
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCATC...............................................................................2411220.00122000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863357000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................2211075.001075000000000100000000110000100100000000000000000000021201000000000000000000000000000000000004001000000000300000000000000410301018051320000000000000000110000000000000010101226012022160718501062000102011100000005000000000000000001120001200810000000000160210360600011911100000100101224332424282549414213946124301432602534829000100021112002001726311212120
..............................................................................................................................ACATAGTCATACGGTGAATGT........................................................................................................................2111035.0010350000000000000000000001200002000000000001000100011101110001000000000000000000002220000000100210150010010000300000000002000000000002000000000022200052633100300000000110899081013030145136004017243400001100000022200000222313642230233113131012000030011410004010131062225132307144065540505160553421117492320123215062111225785185142171242864781214101367310033823830
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................2411031.001031000010000000000000000000200100000000000110020102000211000000000000000000000001000000000000001000000000000000000000000000200120003000000000002220113012000000000000000004020032000308200010030410001050000001000000014003011101100110012000010122440314221503418911204602141612101711211207029015191216130120235264227404247129544471140125534813912141027491060
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................231897.0089700001000000000000010000110010000000000000022001007120000011100000000000000000010120001000003000011000010001000001000228050148010900000000000041021411040111102000000000710060044190705000000150000000100000000010000001003411951595272000381800330210021041201410306410100011111021024309286464123540220231931101355151181214142710272101031443433120545655320115390
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................181841.00841000000000000000010000010000079119112026000000000000000000000000000000000000000000201010000000000000000000030000500000000061000000013851100000000000000001000000000000000000024011372120197011340000060000000000003000000000001000000002200000010000000001000001000000000000010011111010204061101100025570000000000101010000010100000000500001101010
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................191762.00762000000000000000000000000000133182333500000000000000100000000100000000000000000413000000000000000000000000000000000000020000000002422001000000002100001102004110200100100217058404923446310501011010010000000022012000000000001204144444144104393610000011000001101010400201300042421103011000403050015141728101000110011006014001010010011013020001031230
..............................................................................................................................ACATAGTCATACGGTGAATGTTG......................................................................................................................231688.00688000010000000000000000000000000000000020001231001110110000010000000000000000000010000701200013106000001501340030000100120100140000000000000000000312351630020000010200067060011101004070020004000000000100000000000000211573002010311000010000020031521420101220211021102001531100305011011534572319439242310173374101137702014205248252111341537313061311020
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................231613.006130000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000004101021302110000000000002371002130200000000000000440200130109010000000913000000000000000100000000003021010000300000300000040000180100100800000000403010121621101213110000494430612033015345172882201112010200300103109132040019110
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................231552.00552000001000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857211013000020000000030000000000000000000000027030000108000001500000000000002154932200002000000000000000000000000000000020000084510731052103701120521424120131218141612000772528000202400002411721603000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT...............................................................................241544.00544000000000000000000000000000000000000000100000000010001000000000000000000000000000000000000001000000000002000000000000000000000000000000000002400000011000300000000006002010000000102000000010210002020000000000000000003022112210200012541430000000000012010000010000000000110000605017230100021641010053244102001022100000000201400012000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................211505.005050000000000000001000000000000000000011000000200000000000000000000000000000000010010000000000000000000000000000000000000100050701012000000000000000000011010000000000300118011021040100140000104000100000000000000000000010011002022110000000001000200001800000002000000001000011171027031200221142445217501160160670119600002020010416933132214020
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................221483.00483000000000000000000000000200100000000000000100001000100000000000000000000000000241000000000000000000000000000000000000310010231911000000000000000000000020100000000000000960300321402150000107101000000200000001000000210212100122022440050000100030001210200000110000100016010105040120406401272425342120310601802811317912320011302035723424101040
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................191300.003000000000000000000000000000000000000000100000000010010000000000000000000000000011200000100000010000000000000000000100004000001101009600000000000000002100100000000020001557160300117122020000601021000000000000000000000000100100101100001000000001001000001001200010010000020001000721011208101058913311041111154020312141020002123420110201020
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC...............................................................................241299.002990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001100000000000000000000000000000000002000000000000000000100000000000000000010000101010000016898000000000000100000000000000000000000040100010000001021000102022000100011000000000000100000000010
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................201279.0027900000000000000000000010000120010300000110000000000011000001100000000000000000111000000000000010000000000030000000000001000001319022100000000000000000010100200000002000003301001411030100001030001000001000000000000002020011020121101521000000010213000110003001000210002220110609270023102121330001011020520300921357141324300512410710030
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................181261.002610000000000000000000000000011000000000000000000000000000000000000000000000000032300000000000000000000000000000000000001000000001001000000000010100111000000000000200001321008002101905010000511311000000000000000000000000010020110100100000000000000000000000000000000010202000031426040501601231041428210101012112080010101002010022211000000010
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................221241.0024100000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000100000000000000000000000000001000000000000000001000000112002000000000005303000123010500000000100000001000000000000001003021000100000000320000002020020113002136001201000111013417040425201053340000101401111142041112421510100410010329330
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................211238.0023800000000000000000000000000010000000000000000000001001000000000000000000000000002100000000000000000000000000000000000000000110010000000000000111000000300030000100052000100002000011300000040100000000000000000000007021000301220030002000000000112000000000002000011000101105285263821310001011050010001426230002528130022302001100000210210
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................231178.0017800000000000000000000000000000000000000201010000000000100000000000000000000000010000000000000000000000000000000000000000000000010000000010000050001030200000000000000000000000001000300000001304000000000000030000000000000112002200000000001000000001000000000000000000100003262213290900000101210000312410010001111000000000002001412000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................221166.0016600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001112002120000000000000001000001010200000000001000000000000000000000000000000000000000730010000000000002000000000000000000007264170707101002000000000010160001101114020200700000502301001130
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT................................................................................231155.00155000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000110300001100000000000000010000000000000000000100010000000000001000000000000001101001100011000000001000100120000000000100402000016120131501011411050010043341112023121200001001011243122108010
droSim2
CCGCCGCCGC----------------------CACTGTAGCC----G---------ATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221710080.007100805108171993030119347233455586479462154417150111212761868855114
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................22169628.0069628637871912329018001798614412083333000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................21121010.00210109156361398231917540623307180215177792480000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22112616.001261610906665103510022112100000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................2318424.0084242944357370026421986186012162394352000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................2014602.0046024126802831800353710102001000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2313656.00365629571222532001011115629101500000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111965.00196553875803310032933614210315810106
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................2411930.001930205800440302713406341550000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................2011792.00179233190512747840226823525209000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2311632.0016325315514210044127811480722105000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................2511012.00101200090018713543023213231000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................201554.00554503143700000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221488.0048883611500504614212614212000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................231383.0038335452400000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCG...............................................................................241371.0037100002035100000000000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................191336.0033629031410033886000000
..............................................................................................................................ACATAGTCGTACGGTGAATGTT.......................................................................................................................221289.00289946281124925201751541246
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................181288.0028823165000658126000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................191286.00286303014128423225126012000
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................181282.0028281840917202042000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................231133.001332816309222518200100000
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................201123.001231150700000010000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................211107.001078311810011101000000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCG.................................................................................20193.0093854400000000000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22192.00926204013108121000000
....................................................................................................................................................................TGTTAACTGTAAGACT.......................................................................................16191.009100000011851849000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG.................................................................................23172.0072593900001000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................23156.00560222008319172100000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................23155.00550000003229191100000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20154.005413201021311372000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGG...................................................................................20153.0053493100000000000000
......................................................................................................................................................................TTAACTGTAAGACTGTGTC..................................................................................19148.0048382100041020000000
.........................................................................................................................................................................ACTGTAAGACTGTGTCT.................................................................................17145.00450000003123027000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGC...................................................................................20140.0040362200000000000000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCC.................................................................................19139.0039380100000000000000
........................................................................................................................................................................AACTGTAAGACTGTGTCC.................................................................................18134.0034292200000001000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23126.002650010042851000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24124.0024530100122100000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTCG...................................................................................20123.0023182300000000000000
..............................................................................................................................ACATAGTCGTACGGTGAATG.........................................................................................................................20122.0022600021400000000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................21121.002160200025240000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22120.0020510100010111000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC.................................................................................22119.0019162000000001000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................21119.0019100000051111000000
..............................................................................................................................ACATAGTCGTACGGTGAATGTTG......................................................................................................................23118.001800001325212200000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCG.................................................................................21118.0018121500000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA...............................................................................24116.001600000041920000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT................................................................................23116.001638000021200000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGG.................................................................................22115.0015130200000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGG.....................................................................................18115.0015132000000000000000
..............................................................................................................................ACATAGTCGTACGGTGAATGT........................................................................................................................21115.001550201510001000000
....................................................................................................................................................................TGTTAACTGTAAGACTGC.....................................................................................18114.0014140000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT...............................................................................24114.001410100011370000000
..........................................................................................................................................................................CTGTAAGACTGTGTCT.................................................................................16113.001300000017212000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC...............................................................................24113.001350100021211000000
..............................................................................................................................ACATAGTCGTACGGTGAAT..........................................................................................................................19112.001230001601000000100
...........................................................................................................................................................................TGTAAGACTGTGTCT.................................................................................15111.001100000000029000000
........................................................................................................................................................................AACTGTAAGACTGTGTCTA................................................................................19110.0010000000000010000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA..............................................................................25110.001000000021610000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTTCT..................................................................................2129.501930000024621010000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTC.................................................................................2219.00990000000000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC.................................................................................2219.00990000000000000000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCG.................................................................................1919.00970200000000000000
..............................................................................................................................ACATAGTCGTACGGTGAA...........................................................................................................................1819.00950000300001000000
droSec2
CCGCCGCCGC----------------------CGCCGCCACT-------GTAGTCGATGAACGGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221105273.001052731300212625914770499
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111750.001750123017651293
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2111578.001578123183861186
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2311478.001478812591031035
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2311328.00132857164115992
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................2011006.0010062311726840
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231687.006872617042449
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................221412.00412678236227
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201180.0018090131166
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221104.001041112279
..............................................................................................................................ACATAGTCATACGGTGAATGTT.......................................................................................................................22166.0066814017
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24158.0058517333
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................21140.004005134
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24138.00380101117
..............................................................................................................................ACATAGTCATACGGTGAATGTTG......................................................................................................................23134.0034331117
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23131.003176513
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22130.003016122
..............................................................................................................................ACATAGTCATACGGTGAATGT........................................................................................................................21127.002705220
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19125.002541020
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20124.002416422
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19123.002314216
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18116.00163247
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22114.001440010
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21112.00128400
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................2318.0082105
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................2218.0084112
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................2217.0072104
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCG.................................................................................2117.0077000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA................................................................................2316.0061311
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTT..................................................................................2116.0061005
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT...............................................................................2416.0060105
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................1915.0053101
......................................................................................................................................................................TTAACTGTAAGACTGTGTC..................................................................................1915.0053002
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................1815.0051004
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................2514.0040031
....................................................................................................................................................................TGTTAACTGTAAGACTGTC....................................................................................1914.0040013
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA...............................................................................2413.0030012
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT................................................................................2323.0064002
....................................................................................................................................................................TGTTAACTGTAAGACTGTGA...................................................................................2013.0030003
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCA.................................................................................2312.0020002
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT...............................................................................2412.0020200
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA................................................................................2412.0020110
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................2012.0021001
........................................................................................................AT--G-CCGCTCAATTACCCCG.............................................................................................................................................1912.0020002
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................2312.0020101
droYak3
CCGCTG--------------------------------------------------A--AATCGA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACACCAGCCACAT-----------------------CAGCC--------------ACATCGGCCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221181089.001810891010937958317571600942421832739802160
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................22124376.00243761442028985751535160000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2312821.00282120763918515113323700000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2112746.0027461554446254110328800100
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................2212439.002439239127514920000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2111160.0011602057794891261460000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................2011011.0010119393814224120000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................231793.00793186573736932761080000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................231362.0036229606600000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................201287.002872831264162270000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231252.0025277245243259310000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................231158.00158355699132430000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCC.................................................................................201144.001441400400000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221111.00111222326172750000
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19180.008057101000210000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22153.0053411202610000
..............................................................................................................................ACATAGTCATACGGTGAATGTT.......................................................................................................................22153.00530222261440120
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................20152.00523401800000000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG.................................................................................23149.0049470200000000
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18145.0045352204200000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................21137.00372331100000000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCG.................................................................................20130.0030300000000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24125.002512223870000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24121.002102292420000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTC................................................................................22121.0021112610100000
..............................................................................................................................ACATAGTCATACGGTGAATGTTG......................................................................................................................23119.001903123550000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23118.001813006800000
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................21116.0016000041020000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22116.001636021130000
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19112.001221001800000
..............................................................................................................................ACATAGTCATACGGTGAATGT........................................................................................................................21111.001110013600000
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................18111.001160003200000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT...............................................................................24110.001050102200000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGG...................................................................................2018.00880000000000
droEre2
CCGCCGCCGC----------------------CGCCGCCGCC----G---------ATGAACGAA---GA---------------------------AGAAAGGAT--G-CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACAC-----------------------CAGCC--------------ACACCAGCCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT.................................................................................221129674.001296741494422121480627458970859970
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCT.................................................................................2112451.002451150076592246460
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT.................................................................................2312271.00227147171252128417770
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTC..................................................................................2111814.00181489582131814312930
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT................................................................................2311169.00116983379141108800
....................................................................................................................................................................TGTTAACTGTAAGACTGTGT...................................................................................201940.00940110773567930
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC.................................................................................221824.0082463552254541260
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA................................................................................231504.005046112810613430
......................................................................................................................................................................TTAACTGTAAGACTGTGTCT.................................................................................201230.0023098110211090
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA.................................................................................221135.0013530112127640
..............................................................................................................................ACATAGTCATACGGTGAATGTT.......................................................................................................................22195.009513223013440
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC................................................................................23190.0090961703550
........................................................................................................................................................................AACTGTAAGACTGTGTCT.................................................................................18166.006640330560
..............................................................................................................................ACATAGTCATACGGTGAATGTTG......................................................................................................................23155.005550608360
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGT...................................................................................21153.0053101113370
.......................................................................................................................................................................TAACTGTAAGACTGTGTCT.................................................................................19151.0051151012320
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC..................................................................................22151.005101807350
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT...............................................................................24143.0043302011270
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG................................................................................23142.004210401360
..............................................................................................................................ACATAGTCATACGGTGAATGT........................................................................................................................21131.003121203230
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA...............................................................................24128.0028110043100
....................................................................................................................................................................TGTTAACTGTAAGACTGTG....................................................................................19127.002721300210
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT................................................................................22123.002380211110
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC.................................................................................23123.002303000200
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG.................................................................................22120.002030520100
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTC..................................................................................20120.002010110170
....................................................................................................................................................................TGTTAACTGTAAGACTGTTCT..................................................................................21213.502730001230
........................................................................................................AT--G-CCGCTCAATTACCCCG.............................................................................................................................................19112.001220000100
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTC................................................................................22111.00114010240
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTA..................................................................................21111.001100100100
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCA.................................................................................23111.001100000110
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCC.................................................................................2119.0094400100
...................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG.................................................................................2319.0090000090
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA..............................................................................2518.0087000010
....................................................................................................................................................................TGTTAACTGTAAGACTGT.....................................................................................1818.0082010050
....................................................................................................................................................................TGTTAACTGTAAGACTGTGCT..................................................................................2117.0071000060
.....................................................................................................................................................................GTTAACTGTAAGACTGTGT...................................................................................1917.0073000220
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA................................................................................2216.0062000040
..................................................................................................................................................................AATGTTAACTGTAAGACTGTGTCT.................................................................................2416.0061020210
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT...............................................................................2416.0060000150
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT................................................................................2315.0050000230
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCG.................................................................................2115.0055000000
.....................................................................................................................................................................GTTAACTGTAAGACTGTGTCTAAA..............................................................................2414.0044000000
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT...............................................................................2414.0040000130
....................................................................................................................................................................TGTTAACTGTAAGACTGTCC...................................................................................2014.0040300010
....................................................................................................................................................................TGTTAACTGTAAGACTGTC....................................................................................1913.0030010020
....................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA................................................................................2313.0033000000
......................................................................................................................................................................TTAACTGTAAGACTGTGTCTCT...............................................................................2213.0030000120

Generated: 05/17/2015 at 07:56 PM