ID:

dgr_47

 Coordinate:

scaffold_15110:15104008-15104072 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.8 -32.3

Flybase annnotation

utr3 [utr3_minus_6535]

No Repeatable elements found

Sense Strand Reads

GTGTGCAGGTTTTATGGTTTTTGTTTTACTCTGATCGGTGTGGATTGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCGACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACATTCAGTTAAGTTTACCACGAACTCAGC

***********************************.(((((...((((.(((((((((((.((((((((..(((((........)))))..)))))..))).)))))))))))))))...)))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M041

female body

 V109

male body
............................................................................................TGAGATTCTTCTATTCTACTTT................................................... 22 0 1 43260.00 43260 43174 86
.............................................................................................GAGATTCTTCTATTCTACTTT................................................... 21 0 1 3828.00 3828 3828 0
............................................................................................TGAGATTCTTCTATTCTACTT.................................................... 21 0 1 2915.00 2915 2906 9
..................................................AGTAGAATAGCAGGCTTATCACA............................................................................................ 23 0 1 879.00 879 533 346
............................................................................................TGAGATTCTTCTATTCTACTTTT.................................................. 23 1 1 710.00 710 704 6
.............................................................................................GAGATTCTTCTATTCTACTT.................................................... 20 0 1 255.00 255 255 0
............................................................................................TGAGATTCTTCTATTCTACT..................................................... 20 0 1 245.00 245 244 1
..............................................................................................AGATTCTTCTATTCTACTTT................................................... 20 0 1 129.00 129 129 0
...........................................................................................CTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 111.00 111 110 1
...........................................................................................ATGAGATTCTTCTATTCTACTTT................................................... 23 1 1 97.00 97 97 0
............................................................................................TGAGATTCTTCTATTCTACTTTA.................................................. 23 1 1 95.00 95 95 0
.............................................................................................GAGATTCTTCTATTCTACTTTT.................................................. 22 1 1 70.00 70 70 0
............................................................................................TGAGATTCTTCTATTCTACTTTG.................................................. 23 1 1 67.00 67 67 0
...........................................................................................TTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 57.00 57 57 0
..................................................AGTAGAATAGCAGGCTTATCAC............................................................................................. 22 0 1 47.00 47 37 10
...............................................................................................GATTCTTCTATTCTACTTT................................................... 19 0 1 46.00 46 46 0
................................................................................................ATTCTTCTATTCTACTTT................................................... 18 0 1 40.00 40 40 0
..................................................AGTAGAATAGCAGGCTTATCA.............................................................................................. 21 0 1 31.00 31 10 21
...........................................................................................GTGAGATTCTTCTATTCTACTTT................................................... 23 0 1 30.00 30 30 0
...................................................GTAGAATAGCAGGCTTATCACA............................................................................................ 22 0 1 29.00 29 29 0
............................................................................................TGAGATTCTTCTATTCTACTTTC.................................................. 23 0 1 27.00 27 27 0
............................................................................................TTAGATTCTTCTATTCTACTTT................................................... 22 1 1 22.00 22 22 0
.........................................................................TGTAACATTCGACATGGTG......................................................................... 19 0 1 21.00 21 21 0
............................................................................................TGAGATTCTTCTATTCTACTTTGG................................................. 24 1 1 17.00 17 17 0
............................................................................................TGAGGTTCTTCTATTCTACTTT................................................... 22 1 1 16.00 16 16 0
............................................................................................TGATATTCTTCTATTCTACTTT................................................... 22 1 1 15.00 15 15 0
............................................................................................CGAGATTCTTCTATTCTACTTT................................................... 22 1 1 15.00 15 15 0
............................................................................................TGAGATTCTTCTATTCTAC...................................................... 19 0 1 14.00 14 13 1
............................................................................................TGAGATTCCTCTATTCTACTTT................................................... 22 1 1 13.00 13 13 0
...........................................................................................CTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 11.00 11 11 0
.............................................................................................GAGATTCTTCTATTCTACTTTA.................................................. 22 1 1 10.00 10 10 0
............................................................................................TGAGATTCTTCTATTCTACTTA................................................... 22 1 1 10.00 10 10 0
............................................................................................TGAGATTCTTCTATCCTACTTT................................................... 22 1 1 10.00 10 10 0
.............................................................................................GAGATTCTTCTATTCTACT..................................................... 19 0 1 10.00 10 10 0
............................................................................................TGAGATTCTTCTACTCTACTTT................................................... 22 1 1 10.00 10 10 0
.............................................................................................GAGATTCTTCTATTCTACTTTG.................................................. 22 1 1 9.00 9 9 0
............................................................................................TGAGATCCTTCTATTCTACTTT................................................... 22 1 1 9.00 9 7 2
............................................................................................TGAGATTCTTCTATTCTACTTTTT................................................. 24 2 1 9.00 9 9 0
............................................................................................TGGGATTCTTCTATTCTACTTT................................................... 22 1 1 9.00 9 9 0
..............................................................................................AGATTCTTCTATTCTACTT.................................................... 19 0 1 8.00 8 8 0
............................................................................................TGAGATTCTTCTATTTTACTTT................................................... 22 1 1 8.00 8 8 0
............................................................................................TGAGTTTCTTCTATTCTACTTT................................................... 22 1 1 8.00 8 8 0
............................................................................................TGAGCTTCTTCTATTCTACTTT................................................... 22 1 1 8.00 8 8 0
............................................................................................TGAGACTCTTCTATTCTACTTT................................................... 22 1 1 7.00 7 6 1
............................................................................................TGAGATTCTCCTATTCTACTTT................................................... 22 1 1 7.00 7 7 0
............................................................................................TGACATTCTTCTATTCTACTTT................................................... 22 1 1 7.00 7 6 1
...........................................................................................ATGAGATTCTTCTATTCTACTT.................................................... 22 1 1 7.00 7 7 0
............................................................................................TGAGATTCTTCTATTCTACTTTTG................................................. 24 1 1 7.00 7 7 0
............................................................................................TGAGATTCTTCTATTCTACTTG................................................... 22 1 1 6.00 6 6 0
............................................................................................TGAGATTCTTTTATTCTACTTT................................................... 22 1 1 6.00 6 6 0
............................................................................................TGAGATTCTTCTATTCTACTCT................................................... 22 1 1 6.00 6 6 0
............................................................................................TGAGATTCTTCTATTCTGCTTT................................................... 22 1 1 6.00 6 6 0
............................................................................................TGAGATTCTTCTATTCTACCTT................................................... 22 1 1 6.00 6 6 0
..........................................................................................AATGAGATTCTTCTATTCTACTTT................................................... 24 2 1 6.00 6 6 0
............................................................................................TCAGATTCTTCTATTCTACTTT................................................... 22 1 1 6.00 6 6 0
............................................................................................TAAGATTCTTCTATTCTACTTT................................................... 22 1 1 6.00 6 5 1
............................................................................................TGAGATTCTTCTATTCTA....................................................... 18 0 1 6.00 6 6 0
............................................................................................TGAAATTCTTCTATTCTACTTT................................................... 22 1 1 5.00 5 5 0
............................................................................................TGAGATTCTTCTATTCTATTTT................................................... 22 1 1 5.00 5 5 0
............................................................................................AGAGATTCTTCTATTCTACTTT................................................... 22 1 1 5.00 5 5 0
............................................................................................TGAGATTCTTCTATTCTACTTC................................................... 22 1 1 5.00 5 5 0
..................................................AGTAGAATAGCAGGCTTATCACC............................................................................................ 23 1 1 5.00 5 1 4
..................................................AGTAGAATAGCAGGCTTCTCACA............................................................................................ 23 1 1 5.00 5 0 5
..........................................................................................ATTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 5.00 5 5 0
............................................................................................TGAGATTCATCTATTCTACTTT................................................... 22 1 1 4.00 4 4 0
..................................................AGTAGAATAGCAGGCTTTTCACA............................................................................................ 23 1 1 4.00 4 0 4
............................................................................................TGAGATTCTTCCATTCTACTTT................................................... 22 1 1 4.00 4 4 0
..................................................AGTAGAATAGCAGGCTTATC............................................................................................... 20 0 1 4.00 4 2 2
............................................................................................TGAGATTCTTCTATTCTTCTTT................................................... 22 1 1 4.00 4 2 2
............................................................................................TGAGATTCTTCTATTCTACTTTAA................................................. 24 2 1 4.00 4 4 0
............................................................................................TGAGATTATTCTATTCTACTTT................................................... 22 1 1 4.00 4 4 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGC................................................ 25 2 1 4.00 4 4 0
..................................................AGTAGAATAGCAGGCTTATCACT............................................................................................ 23 1 1 4.00 4 0 4
..........................................................................................ACTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 4.00 4 4 0
...........................................................................................TTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 4.00 4 4 0
..........................................................................................CTTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 4.00 4 4 0
............................................................................................TGATATTCTTCTATTCTACTT.................................................... 21 1 1 3.00 3 3 0
............................................................................................TGAGATTTTTCTATTCTACTTT................................................... 22 1 1 3.00 3 3 0
..........................................................................................TTTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 3.00 3 3 0
....................................................TAGAATAGCAGGCTTATCACA............................................................................................ 21 0 1 3.00 3 3 0
............................................................................................TGAGATTGTTCTATTCTACTTT................................................... 22 1 1 3.00 3 3 0
..................................................AGTAGAATAGCAGGCTTATCACG............................................................................................ 23 1 1 3.00 3 0 3
..........................................................................................GCTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 3.00 3 3 0
.............................................................................................CAGATTCTTCTATTCTACTTT................................................... 21 1 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTATTCTACTTTAG................................................. 24 1 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTATTGTACTTT................................................... 22 1 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTATTCCACTTT................................................... 22 1 1 3.00 3 3 0
............................................................................................TGTGATTCTTCTATTCTACTTT................................................... 22 1 1 3.00 3 2 1
............................................................................................TGAGATTCTTCTATTCTACTTTGGCA............................................... 26 3 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTATTCTACTTTTA................................................. 24 2 1 3.00 3 3 0
............................................................................................GGAGATTCTTCTATTCTACTTT................................................... 22 1 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTGTTCTACTTT................................................... 22 1 1 3.00 3 3 0
..........................................................................................GTTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTAATCTACTTT................................................... 22 1 1 3.00 3 3 0
.............................................................................................GATATTCTTCTATTCTACTTT................................................... 21 1 1 3.00 3 3 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGT................................................ 25 2 1 3.00 3 3 0
..................................................AGTAGAATTGCAGGCTTATCACA............................................................................................ 23 1 1 3.00 3 0 3
............................................................................................TGAGATTCTTCTATTCTCCTTT................................................... 22 1 1 3.00 3 2 1
..........................................................................................TGTGAGATTCTTCTATTCTACTTT................................................... 24 0 1 2.00 2 2 0
..................................................AGTAGAATAGCAGGCTTATCACAA........................................................................................... 24 1 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTATACTTT................................................... 22 1 1 2.00 2 2 0
..........................................................................................CCTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 2.00 2 2 0
.............................................................................................GAGATTCTTCTATTCTACTTTC.................................................. 22 0 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTCTACTTTTCC................................................ 25 3 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTCTACTTTGT................................................. 24 2 1 2.00 2 2 0
.............................................................................................GACATTCTTCTATTCTACTTT................................................... 21 1 1 2.00 2 2 0
..................................................AGTAGAATAGCAGGCTTGTCACA............................................................................................ 23 1 1 2.00 2 0 2
............................................................................................TGAGATTCTTCTATTCTACTC.................................................... 21 1 1 2.00 2 2 0
.............................................................................................GAGATTTTTCTATTCTACTTT................................................... 21 1 1 2.00 2 2 0
..............................................................................................AGATTCTTCTATTCTACTTTT.................................................. 21 1 1 2.00 2 2 0
.........................................................................................CAGTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 2.00 2 2 0
......................................................GAATAGCAGGCTTATCACA............................................................................................ 19 0 1 2.00 2 2 0
..........................................................................................AGTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 2.00 2 2 0
............................................................................................TGAGCTTCTTCTATTCTACTTTT.................................................. 23 2 1 2.00 2 2 0
..............................................................................................AGATTCTTCTATTCTACT..................................................... 18 0 1 2.00 2 2 0
.............................................................................................GAGATTCTTCCATTCTACTTT................................................... 21 1 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTCTACTTTAC................................................. 24 2 1 2.00 2 2 0
...............................................................................................GATTCTTCTATTCTACTTTT.................................................. 20 1 1 2.00 2 2 0
...............................................................................................GATTCTTCTATTCTACTT.................................................... 18 0 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTCTACTTTTTC................................................ 25 3 1 2.00 2 2 0
............................................................................................TGAGATTCTGCTATTCTACTTT................................................... 22 1 1 2.00 2 2 0
.........................................................................................AATTGAGATTCTTCTATTCTACTTT................................................... 25 3 1 2.00 2 2 0
..........................................................................................ATTGAGATTCTTCTATTCTACTT.................................................... 23 2 1 2.00 2 2 0
...........................................................................................CTGAGATTCTTCTATTCTACTTTT.................................................. 24 2 1 2.00 2 2 0
..................................................AGTAGCATAGCAGGCTTATCACA............................................................................................ 23 1 1 2.00 2 0 2
..................................................AGTAGAATAGCAGGCTTATCACAT........................................................................................... 24 0 1 2.00 2 1 1
.............................................................................................GGGATTCTTCTATTCTACTTT................................................... 21 1 1 2.00 2 2 0
............................................................................................TGAGATTCTTCTATTCTACTTTGC................................................. 24 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGTA............................................... 26 3 1 1.00 1 1 0
.......................................................................................CGGCCTGAGATTCTTCTATTCTACTTT................................................... 27 3 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCACATC.......................................................................................... 25 1 1 1.00 1 1 0
..................................................AGTAGATTAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
............................................................................................TGAGATTCTTCTATTCTACTTTGGACC.............................................. 27 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGTT............................................... 26 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTTAC................................................ 25 3 1 1.00 1 1 0
....................................................TAGAATAGCAGTCTTATCA.............................................................................................. 19 1 1 1.00 1 0 1
............................................................................................TGAGATTCTTCTATTCTACTAT................................................... 22 1 1 1.00 1 1 0
............................................................................................TGAGATCCTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
...........................................................................................GTGAGATTCTTCTATTCTACTT.................................................... 22 0 1 1.00 1 1 0
.............................................................................................GAGATTATTCTATTCTACTTT................................................... 21 1 1 1.00 1 1 0
............................................................................................GGAGATTCTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGTG................................................ 25 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTAGCC............................................... 26 2 1 1.00 1 1 0
.......................................................................................CGGACTGAGATTCTTCTATTCTACTTT................................................... 27 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCAACTTT................................................... 22 1 1 1.00 1 1 0
....................................................TAGAATAGAAGGCTTATCACA............................................................................................ 21 1 1 1.00 1 0 1
.......................................................AATAGCAGGCTTATCACAT........................................................................................... 19 0 1 1.00 1 1 0
....................................................TAGAATAGCAGGCTTATCA.............................................................................................. 19 0 1 1.00 1 0 1
............................................................................................TGAGATACTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTACTTTGC................................................. 23 2 1 1.00 1 1 0
................................................................................................ATTCTTCTATTCTACTTTA.................................................. 19 1 1 1.00 1 1 0
..............................................CGCGAGTAGAATAGCAGGCTTATCACA............................................................................................ 27 2 1 1.00 1 1 0
.........................................................................................TTCTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGAGT.............................................. 27 3 1 1.00 1 1 0
..............................................................................................ATATTCTTCTATTCTACTTT................................................... 20 1 1 1.00 1 1 0
.........................................................................................GCCTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTACTTA................................................... 21 1 1 1.00 1 1 0
..........................................................................................GTTGAGATTCTTCTATTCTACTT.................................................... 23 2 1 1.00 1 1 0
..........................................................................................GCTGAGATTCTTCTATTCTACTT.................................................... 23 2 1 1.00 1 1 0
..................................................AGTAGACTAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
.................................................AAGTAGAATAGCAGGCTTATCAC............................................................................................. 23 0 1 1.00 1 1 0
..................................................GGTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
............................................................................................TGAGATTCTTCTATTCTACTTTTGG................................................ 25 2 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTACTTTGG................................................. 23 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTCAG................................................ 25 2 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATGCTACTTT................................................... 21 1 1 1.00 1 1 0
..................................................ACTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 1 0
............................................................................................TGAGATGCTTCTATTCTACTTT................................................... 22 1 1 1.00 1 1 0
..........................................................................................TCTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTTTCC............................................... 26 3 1 1.00 1 1 0
............................................................................................TGAGGTTCTTCTATTCTACT..................................................... 20 1 1 1.00 1 1 0
.........................................................................................GACTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
........................................................................................TAAGTGAGATTCTTCTATTCTACTTT................................................... 26 3 1 1.00 1 1 0
..........................................................................................GATGAGATTCTTCTATTCTACTTT................................................... 24 2 1 1.00 1 1 0
............................................................................................TGGGATTCTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTACG................................................ 25 3 1 1.00 1 1 0
...................................................GTAGAATAGCAGGCTTATCA.............................................................................................. 20 0 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTCTT................................................ 25 2 1 1.00 1 1 0
.................................................AAGTAGAATAGCAGGCTTATC............................................................................................... 21 0 1 1.00 1 0 1
............................................................................................TGAGATTCTTCTATTCTACTTTGGCAAA............................................. 28 3 1 1.00 1 1 0
.............................................................................................GAAATTCTTCTATTCTACTTT................................................... 21 1 1 1.00 1 1 0
.........................................................................................AGTTGAGATTCTTCTATTCTACTTT................................................... 25 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTAAACA.............................................. 27 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACC..................................................... 20 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGGAAA............................................. 28 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTTTTCTACT..................................................... 20 1 1 1.00 1 1 0
............................................................................................TGCGATTCTTCTATTCTACTTT................................................... 22 1 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCACAC........................................................................................... 24 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTGTATTCTACTTT................................................... 22 1 1 1.00 1 1 0
.........................................................................................CTCTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
.................................................CAGTAGAATAGCAGGCTTATCACA............................................................................................ 24 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTAATTT................................................... 21 1 1 1.00 1 1 0
.............................................................................................TAGATTCTTCTATTCTACTTT................................................... 21 1 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCGCA............................................................................................ 23 1 1 1.00 1 0 1
..........................................................................................TATGAGATTCTTCTATTCTACTTT................................................... 24 1 1 1.00 1 1 0
...............................................ATTAGTAGAATAGCAGGCTTATCACA............................................................................................ 26 3 1 1.00 1 1 0
....................................................TAGAATAGCAGGCTTATCAC............................................................................................. 20 0 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCACAAA.......................................................................................... 25 2 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCACATAG......................................................................................... 26 2 1 1.00 1 1 0
..................................................AGTGGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
..................................................AGTAGAAAAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
..................................................AGTAGAATGGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
.........................................................................................TTGTGAGATTCTTCTATTCTACTTT................................................... 25 1 1 1.00 1 1 0
.................................................AAGTAGAATAGCAGGCTTATCA.............................................................................................. 22 0 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTAT................................................................................................ 19 0 1 1.00 1 1 0
............................................................................................TGAGAATCTTCTATTCTACTTT................................................... 22 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTCGGATA............................................. 28 3 1 1.00 1 1 0
............................................................................................TGAGACTCTTCTATTCTACTTTAA................................................. 24 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTTTTCTACTTT................................................... 22 1 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTCATCACA............................................................................................ 23 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTACTCTACTTT................................................... 21 1 1 1.00 1 1 0
..........................................................................GTAACATTCGACATGGTG......................................................................... 18 0 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACATG................................................... 22 2 1 1.00 1 1 0
........................................................................................GAATTGAGATTCTTCTATTCTACTTT................................................... 26 3 1 1.00 1 1 0
..................................................AGTAAAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 1 0
............................................................................................CGGGATTCTTCTATTCTACTTT................................................... 22 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTATC................................................ 25 3 1 1.00 1 1 0
...........................................................................................ATGAGATTCTTCTATTCTACTTTT.................................................. 24 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTGT.................................................. 23 2 1 1.00 1 1 0
..................................................AGTAGAATCGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
.................................................TAGTAGAATAGCAGGCTTATCACA............................................................................................ 24 1 1 1.00 1 1 0
...........................................................................................CTGAGATTCTTCTATTCTACT..................................................... 21 1 1 1.00 1 1 0
.............................................................................................GAGAATCTTCTATTCTACTTT................................................... 21 1 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGCTTATCCCA............................................................................................ 23 1 1 1.00 1 0 1
..................................................AGTAGAATAGCAGTCTTATCACA............................................................................................ 23 1 1 1.00 1 1 0
........................................................................................ATTTTGAGATTCTTCTATTCTACTT.................................................... 25 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTAGCCC.............................................. 27 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCCACTT.................................................... 21 1 1 1.00 1 1 0
...........................................................................................ATGAGATTCTTCTGTTCTACTTT................................................... 23 2 1 1.00 1 1 0
.........................................................................................CGTTGAGATTCTTCTATTCTACTTT................................................... 25 3 1 1.00 1 1 0
..............................................................................CATTCGACATGGTGTGAGA.................................................................... 19 0 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTTTG................................................ 25 3 1 1.00 1 1 0
.................................................GAGTAGAATAGCAGGCTTATCACA............................................................................................ 24 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGCT................................................ 25 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGGCG.............................................. 27 3 1 1.00 1 1 0
...........................................................................................CTGAGGTTCTTCTATTCTACTTT................................................... 23 2 1 1.00 1 0 1
............................................................................................TGAGACTCTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
.........................................................................................CTGTGAGATTCTTCTATTCTACTTT................................................... 25 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTACTCTACTT.................................................... 21 1 1 1.00 1 1 0
............................................................................................TGGGATTCTTCTATTCTACTTTT.................................................. 23 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGAAG.............................................. 27 3 1 1.00 1 1 0
............................................................................................TGAGATTCCTCTATTCTACTTTT.................................................. 23 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCCATTCTACTT.................................................... 21 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTTCTTT................................................... 21 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCGACTTT................................................... 21 1 1 1.00 1 1 0
...........................................................................................ATGAGATTCTTCTATTCTACTTTA.................................................. 24 2 1 1.00 1 1 0
.............................................................................................GAGACTCTTCTATTCTACTT.................................................... 20 1 1 1.00 1 1 0
............................................................................................TGAGATTCTACTATTCTACTTT................................................... 22 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTGGA................................................. 24 3 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTTGTA............................................... 26 3 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTATTTT................................................... 21 1 1 1.00 1 1 0
.............................................................................................GAGATTCTTCTATTCTAC...................................................... 18 0 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTTCTT.................................................... 21 1 1 1.00 1 1 0
........................................................................................TATGTGAGATTCTTCTATTCTACTTT................................................... 26 2 1 1.00 1 1 0
....................................................TAGAATAGCAGGCTTATCACATGT......................................................................................... 24 0 1 1.00 1 1 0
............................................................................................TGAGATTTTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
..................................................AGTAGAATAGCAGGATTATCACA............................................................................................ 23 1 1 1.00 1 0 1
.............................................................................................GAGATTCTTCTATTCCACTTT................................................... 21 1 1 1.00 1 1 0
.....................................................AGAATAGCAGGCTTATCAC............................................................................................. 19 0 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTAGTTT................................................... 22 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTCGCAGA............................................. 28 3 1 1.00 1 1 0
.........................................................................................ATCTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCGACGATCGAC............................................... 26 3 1 1.00 1 1 0
.........................................................................................GTATGAGATTCTTCTATTCTACTTT................................................... 25 1 1 1.00 1 1 0
.................................................CAGTAGAATAGCAGGCTTATCGCA............................................................................................ 24 2 1 1.00 1 1 0
..................................................AGCAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
............................................................................................TGAGATTCTTCTATTCTAATTT................................................... 22 1 1 1.00 1 1 0
..................................................AGAAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 1.00 1 0 1
...........................................................................................CTTAGATTCTTCTATTCTACTTT................................................... 23 2 1 1.00 1 1 0
............................................................................................TGAGCTTCTTCTATTCTACTT.................................................... 21 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGGGA............................................... 26 3 1 1.00 1 1 0
.........................................................................................GGCTGAGATTCTTCTATTCTACTTT................................................... 25 2 1 1.00 1 1 0
.........................................................................................GAGTGAGATTCTTCTATTCTACTTT................................................... 25 1 1 1.00 1 1 0
............................................................................................TGAGATTCTTCTATTCTACTTTGA................................................. 24 2 1 1.00 1 1 0
............................................................................................CGAGATTCTTCTATTCTACTTTT.................................................. 23 2 1 1.00 1 1 0
...................................................GTAGAATAGCAGGCTTATTAC............................................................................................. 21 1 1 1.00 1 1 0
..................................................AGTAGAATAGCCGGCTTATCA.............................................................................................. 21 1 1 1.00 1 0 1
........................................................................................GGTGTGAGATTCTTCTATTCTACTTTA.................................................. 27 1 1 1.00 1 1 0
.............................................................................................TAGATTCTTCTATTCTACTTTT.................................................. 22 2 1 1.00 1 1 0
.............................................................................................TAGATTCTTCTATTCTACTTTG.................................................. 22 2 2 0.50 1 1 0
..........................................................................................AATGAGATTCTTCTATTCTACTTTT.................................................. 25 3 2 0.50 1 1 0
.........................................................................................TGCTGAGATTCTTCTATTCTACTT.................................................... 24 3 2 0.50 1 1 0
..................................................................................................TCTTCTATTCTACTTTGG................................................. 18 1 2 0.50 1 1 0
.................................................................................................TTCTTCTATTCTACTTTT.................................................. 18 1 4 0.50 2 2 0
...................................................................................................CTTCTATTCTACTTTTGACCC............................................. 21 3 4 0.25 1 1 0

Anti-sense strand reads

CACACGTCCAAAATACCAAAAACAAAATGAGACTAGCCACACCTAACCGTTCATCTTATCGTCCGAATAGTGTACATTGTAAGCTGTACCACACTCTAAGAAGATAAGATGAAAGCTGTTTGTGGTCGATCGCAGTGTAAGTCAATTCAAATGGTGCTTGAGTCG

************************************.(((((...((((.(((((((((((.((((((((..(((((........)))))..)))))..))).)))))))))))))))...)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15110:15103958-15104122 - dgr_47 confident GTGTGCA-----------------GGTTTTATGGT-TTTTG--T-TTTA---CTCTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACATTCA-----------GTTAAGTTTACCACGAACTCAGC
droVir3 scaffold_13049:17089393-17089552 + dvi-mir-958 Known_mirbase GTTT----------------------TTTTAATGT-TCTCT--A-TATA---TTTTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCTTTTTCATGAATTTCATGAACG-----------AATGCTTC
droMoj3 scaffold_6680:22084816-22084948 + dmo_24 confident TG-T------------------------------------------G-AT--TCTCAGTCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTCGTTTTCGCA---------AG------C------GATTCAGC
droWil2 scf2_1100000004511:7060857-7061012 + dwi_26 confident AATTGCAAAAAAAAAAGGATCGATATCGATGAG---TTTTGACTATG-AC--TATCTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACA----------------------------------------
dp5 XR_group8:344175-344291 - dps-mir-958 Known_mirbase ATAT------------------------------------------G-GCTAGCACGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATC-----------------------------------------
droPer2 scaffold_96:132292-132399 + dpe_47 confident --------------------------------------------------------GATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTTAT-------------------------------------
droAna3 scaffold_13337:22380401-22380501 - dan_26 confident ----------------------------------------------------------CCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACC-----------------------------------------
droBip1 scf7180000396426:441197-441299 + --------------------------------------------------------GACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACC-----------------------------------------
droKik1 scf7180000299918:44963-45068 - --------------------------------------------------------GAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCAC---------------------------------------
droFic1 scf7180000453830:377319-377448 + CTGTGCT-----------------ATCCTCAAGGACTT--------------TCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCAC---------------------------------------
droEle1 scf7180000491199:65270-65388 + GG-------------------------------TATTT---T----------CCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACAT-------------------------------------
droRho1 scf7180000773586:33583-33732 + CC--------------------------TCAAGGACTT---T----------CCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACATAAG-----------AACAAGTGCAATTGAAAGGTAAC
droBia1 scf7180000302377:590013-590116 + ---------------------------------------------------------ATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCAC---------------------------------------
droTak1 scf7180000415263:76352-76453 - ----------------------------------------------------------TCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCA----------------------------------------
droEug1 scf7180000409801:238275-238387 - TT-----------------------------------T---T----------CCGCGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCAC---------------------------------------
dm3 chr3L:22662376-22662484 - dme-mir-958 Known_mirbase --------------------------------------------------------GATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCC-----------------------------------
droSim2 3l:22164276-22164384 - dsi-mir-958 Known_mirbase --------------------------------------------------------GATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCC-----------------------------------
droSec2 scaffold_11:2578670-2578777 - dse_21 confident --------------------------------------------------------GATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGACT------------------------------------
droYak3 3L:23123705-23123837 - dya_21 confident GAAT--T-----------------ATCCTTAAGGATTT---T----------CCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAACCC-----------------------------------
droEre2 scaffold_4784:22312268-22312397 - der_1542 TT----------------------ATCCTTGAGGATTG---T----------CTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAACCC-----------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
GTGTGCA-----------------GGTTTTATGGT-TTTTG--T-TTTA---CTCTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACATTCA-----------GTTAAGTTTACCACGAACTCAGCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................22143260.00432604317486
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................2113828.00382838280
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2112915.00291529069
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................231879.00879533346
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231710.007107046
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................201255.002552550
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................201245.002452441
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201129.001291290
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................23195.0095950
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................22170.0070700
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................23167.0067670
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................22147.00473710
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................19146.0046460
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18140.0040400
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................21131.00311021
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................23130.0030300
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................22129.0029290
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23127.0027270
..................................................................................................TGTAACATTCG-ACATGGTG....................................................................................19121.0021210
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19114.0014131
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22110.0010100
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................22110.0010100
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19110.0010100
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................2219.00990
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................2419.00990
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................1918.00880
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................2216.00660
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................1816.00660
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................2215.00550
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................2315.00514
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................2014.00422
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................2414.00440
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................2314.00404
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................2113.00330
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................2313.00303
......................................................................................................................TGAGATTCTTCTATTCTACTTTTA............................................................2413.00330
....................................................................................................................TGTGAGATTCTTCTATTCTACTTT..............................................................2412.00220
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................2412.00220
.......................................................................................................................GAGATTCTTCTATTCTACTTTC.............................................................2212.00220
......................................................................................................................TGAGATTCTTCTATTCTACTTTTCC...........................................................2512.00220
......................................................................................................................TGAGATTCTTCTATTCTACTTTGT............................................................2412.00220
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................2112.00220
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................2112.00220
...............................................................................GAATAGCAGGCTTATCACA........................................................................................................1912.00220
........................................................................................................................AGATTCTTCTATTCTACT................................................................1812.00220
......................................................................................................................TGAGATTCTTCTATTCTACTTTAC............................................................2412.00220
.........................................................................................................................GATTCTTCTATTCTACTTTT.............................................................2012.00220
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................1812.00220
......................................................................................................................TGAGATTCTTCTATTCTACTTTTTC...........................................................2512.00220
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................2412.00211
......................................................................................................................TGAGATTCTTCTATTCTACTTTGC............................................................2411.00110
...........................................................................AGTAGAATAGCAGGCTTATCACATC......................................................................................................2511.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTTAC...........................................................2511.00110
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................2211.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTGTG...........................................................2511.00110
................................................................................AATAGCAGGCTTATCACAT.......................................................................................................1911.00110
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................1911.00101
.......................................................................................................................GAGATTCTTCTATTCTACTTTGC............................................................2311.00110
..........................................................................................................................ATTCTTCTATTCTACTTTA.............................................................1911.00110
.......................................................................................................................GAGATTCTTCTATTCTACTTA..............................................................2111.00110
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................2311.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTCAG...........................................................2511.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTACG...........................................................2511.00110
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................2011.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTCTT...........................................................2511.00110
..........................................................................AAGTAGAATAGCAGGCTTATC...........................................................................................................2111.00101
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................2011.00110
...........................................................................AGTAGAATAGCAGGCTTATCACAC.......................................................................................................2411.00110
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................2011.00110
...........................................................................AGTAGAATAGCAGGCTTATCACAAA......................................................................................................2511.00110
...........................................................................AGTAGAATAGCAGGCTTATCACATAG.....................................................................................................2611.00110
..........................................................................AAGTAGAATAGCAGGCTTATCA..........................................................................................................2211.00110
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................1911.00110
...................................................................................................GTAACATTCG-ACATGGTG....................................................................................1811.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTATC...........................................................2511.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTGT.............................................................2311.00110
.......................................................................................................CATTCG-ACATGGTGTGAGA...............................................................................1911.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTTTG...........................................................2511.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTGCT...........................................................2511.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTGGA............................................................2411.00110
.......................................................................................................................GAGATTCTTCTATTCTAC.................................................................1811.00110
.............................................................................TAGAATAGCAGGCTTATCACATGT.....................................................................................................2411.00110
..............................................................................AGAATAGCAGGCTTATCAC.........................................................................................................1911.00110
......................................................................................................................TGAGATTCTTCTATTCTACTTTGA............................................................2411.00110
..................................................................................................................GGTGTGAGATTCTTCTATTCTACTTTA.............................................................2711.00110
...........................................................................................................................TTCTTCTATTCTACTTTT.............................................................1840.50220
droVir3
GTTT----------------------TTTTAATGT-TCTCT--A-TATA---TTTTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCTTTTTCATGAATTTCATGAACG-----------AATGCTTCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221399626.0039962610733129244614646200000005263332375818691334116135245457780300531300546140256349498729175162527102555392557528816617738136025540027273355683332291151463312789940172035214128381316227212227
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21150845.00508451404324110841120000000825378128339303269013008991541420610423442103215143120319227200502129242716251772469725143135089220026171310012
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21127959.0027959002784199000000000024000203102010000000000002000000000000000000000100000010000000000
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2319461.0094611102153058166100011000023977467032491983291943121547072110367611182712312512790731167012712373101894240685335118129501750510316127763433114452
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2014527.00452740347750000000000086521750494301901225722617367192010000058100000121011031211551221027032400000112000100
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................2214440.004440201744243000000000023001005200000020000000002000000000000000001001000200000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2013781.0037810037770000000000011000002000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................2313389.0033890027682360000000000475412301413048380223111652000000040100011020251015231520100271200000000000111
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2211261.00126137170638010011000041912109802143330322134102000102001000012402613146420754113010101123010100101
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................2011197.00119700113749000000000000010201000000000000000000000000000000000100000002400000000000000
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................2111078.00107830048300100020000401661598020396209111920160001133000000000000000000010330801000000030001010
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231802.0080200653370000000000812153301611010112913010000040000000000010000101101016900000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231741.0074100670170000000000911040107500042050000000003000000000000000000000003000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................231559.00559005512000000000010012001000000000000000000000000000000000000000001000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................221378.003780035814000000000010100100100000000000000000000000001001000000000000000000000000000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191377.003770035511000000000000110100300000000000000000000000000000000201110000000000000000000
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................231344.00344003402000000000000000000200000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................181327.00327003009000000000011000100000000041000000001000000000010000510000000200000000000000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................181283.0028300128000000000003815565902623000450120010000002000000000000000001000102000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................191270.00270002700000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................191218.002180011280000000000141002170106000131200000010040000001010211002121710102400000000000000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221200.00200201950000000000000010000000000000000000000000000000000000000000200000000000000000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201196.001965090500000100009514110141101000100000010400000002000010000101204400000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................211159.001590011435000000000011100000300000020000000001000000000000000000100000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................241147.00147007110000000000151100303404285221010421203000000000000000000000104600000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTC............................................................241146.00146001211000000000012002102200001020000000002000000000000000002000106000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCC............................................................241120.00120001042000000000011000000000010001100000001000000000000000000000105200000000000000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19199.009900962000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................21197.0097004400000000000210201011000000200000000040000001000000001001603000000000000000000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19178.0078302500000000000320410012000000000000000030000000000000000000302500010000040000010
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22178.007800714000000000000000000000000000000000000000000000000000000100000100000000000001
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22177.007700770000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................24176.0076140141000000000010000000000000000000000000000101513260432000810600000010100000001
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................22173.0073004320000000000030110001000010010000000001000000000000000001000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................23170.007010301000000000060001103000000201000000003000001111020011000050600000000000000002
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................23167.006740262000000000010000200200000001000000000000012402111121000420600000000000100000
.......................................................................................................................GAGATTCTTCTATTCTACTTTC.............................................................22167.006700652000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTCC...........................................................25164.006400630000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23162.0062103400000000000300010001010100100010000020000000000000001010001202000000000000000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21156.005610550000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22151.005100510000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................22145.004500450000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGTACAATTCA-ACCTAGTG....................................................................................19143.004300314000000000000000000100000000000010000000100000010000000210000000100000000000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18140.004000390000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24138.003820161000000000020000000600010100000000001000000000100100000000600000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23137.003730021000000000000000000000000000000000000000000000011000000010100000000000000000
..........................................................................AAGTAGAATAGCAGGCTTATCA..........................................................................................................22135.003520220000000000001000000100000000000000000000000000000000000010701000000000000000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................21129.002900280000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24127.002710140000000000010000002001000000000000000000001000000000000000200000112000000001
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20125.002500250000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................21124.002400700000000000100001000000000100000000000000000000000000100001100000000002000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCCC...........................................................25124.002400220000000000000000000010000000000000000000000000000000000000001000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................24123.002300182000000000000000002000000000000000000000000000000000000000001000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................21120.002000911000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCC..........................................................................................................21118.00180080000000000000001004010000000000000002000000000000000000000200000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTCC............................................................23117.001700170000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TGTGAGATTCTTCTATTCTACTTT..............................................................24116.001600150000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20114.00140080000000000000000000100000000000000000000000000000000000030200000000000000000
.........................................................................CAAGTAGAATAGCAGGCTTATCAC.........................................................................................................24114.00140062000000000000000000000000000000000000000000020000100000200100000000000000000
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................20114.001400100000000000000010000000000000000000001000000000000000000010100000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTGG.............................................................23113.001300130000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AAGTAGAATAGCAGGCTTATC...........................................................................................................21112.00122071000000000000010001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTAC.................................................................18112.001200120000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20111.00110037000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACA................................................................20111.00110090000000000000000100000000000000000001000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTC...............................................................20111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTAGAATAGCAGGCTTATC...........................................................................................................19110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTTC............................................................23110.00100090000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................AAGTAGAATAGCAGGCTTATCACC........................................................................................................2419.0090041000000000000000000000000000000000000000002000000000000200000000000000000000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1819.0090090000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CTTCTATTCTACTTT..............................................................1518.0080000000000000000000000000000000000000000000000000000001250000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTAA............................................................2318.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTA............................................................2418.0080060000000000020000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................2218.0080040000000000000000000000000000000000000000000000000000000000400000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTA...............................................................2118.0080061000000000000000000000000000000100000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................1817.0071030000000000001000000000000000000000000000000000000000000020000000000000000000
.........................................................................CAAGTAGAATAGCAGGCTTATC...........................................................................................................2217.0070042000000000000000000000000000000000000000000000000000000000100000000000000000
droMoj3
TG-T------------------------------------------G-AT--TCTCAGTCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTCGTTTTCGCA---------AG------C------GATTCAGCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221790393.0079039334644149589443058382
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21140286.00402863015924111002873
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22139304.003930474100392290
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21132590.00325903144110011480
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2318399.00839927591103162420932404
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................2314016.004016257840014286
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................2013150.00315030040001460
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2012678.002678229260332651
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2012520.0025202484000360
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2211348.00134859417031409171
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191770.007706050001650
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231687.00687610101750
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................211592.00592318243522220
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................181400.004002230001770
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231300.00300652002330
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................221281.00281266000150
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................231278.0027827100070
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................211257.0025770002500
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................231228.0022822700010
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................221227.00227300001970
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................191196.00196101100940
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................191178.0017817800000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221163.0016315700015
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................191151.0015114600050
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201123.00123546022833
..................................................................................................TGTACCATTTG-ACCGAGTG....................................................................................191115.00115192600619
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................211114.0011420001120
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20177.00771000760
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................21177.00771824002213
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22150.005031000190
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22150.00505000000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21147.00474600001
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24146.00464300030
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19145.004534001010
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23134.003416000414
......................................................................................................................TGAGATTCTTCTATTCTACTGC..............................................................22131.00310000310
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18129.00292500013
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24129.00291810073
........................................................................................................................AGATTCTTCTATTCTACTTC..............................................................20128.00280000280
....................................................................................................................TGTGAGATTCTTCTATTCTACTTT..............................................................24126.002612000140
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18124.00242400000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................21124.00242300010
.........................................................................................................................GATTCTTCTATTCTACTTC..............................................................19122.00220000220
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................24122.002211000110
......................................................................................................................TGAGATTCTTCTATTCTACTCC..............................................................22121.00210000210
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................22119.00191900000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22117.00171700000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24116.00161200022
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20116.00161600000
droWil2
AATTGCAAAAAAAAAAGGATCGATATCGATGAG---TTTTGACTATG-AC--TATCTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACA----------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221160629.0016062949156281226403835
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................23121756.0021756271244929018556190
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21115935.00159355156734020611
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21112707.0012707012699170
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2211854.001854129114149850
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................2311501.001501214822150
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2011307.00130701305110
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2011259.0012592120414336
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201788.007880788000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231547.005470542230
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................211517.0051701076333413
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................211355.003551112112265
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191354.003542352000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................181342.003422340000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201324.003242150191503
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221222.0022221990210
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................191163.00163112714210
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................231118.001180118000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231112.001120108040
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................221112.001120112000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................231110.001100110000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................231106.001060423610
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19192.0092092000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24180.0080078020
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19173.00731571131
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19165.0065065000
..................................................................................................TGTTCCCTTTACAACCGGTG....................................................................................20164.0064059050
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20154.00540333153
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24145.00450250200
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22144.0044044000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18138.00380220151
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18131.00310200101
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21131.0031130000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22125.0025024010
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................22124.0024024000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................24122.0022022000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22121.0021018030
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23121.0021230160
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................23121.00211100100
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18119.0019019000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCC............................................................24118.0018018000
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................20118.0018051120
.............................................................................TAGAATAGCAGGCTTATCACAT.......................................................................................................22117.001709710
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23117.0017011150
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22116.0016016000
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................22116.0016014020
............................................................................GTAGAATAGCAGGCTTATC...........................................................................................................19112.0012011010
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................23112.001225050
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................24111.001136020
...............................................................................GAATAGCAGGCTTATCACA........................................................................................................19110.001006040
....................................................................................................................TGTGAGATTCTTCTATTCTACTT...............................................................2319.00908010
...........................................................................AGTAGAATAGCAGGCTTT.............................................................................................................1819.00909000
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................2219.00909000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................1919.00908010
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................2019.00909000
.......................................................................................................................GAGATTCTTCTATTCTACTTTAA............................................................2319.00909000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................2119.00909000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................2117.00706100
......................................................................................................................TGAGATTCTTCTATTCTACTTTCCC...........................................................2516.00606000
.........................................................................................................................GATTCTTCTATTCTACTTTT.............................................................2016.00606000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1815.00505000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................2415.00503020
.......................................................................................................................GAGATTCTTCTATTCTACTTTC.............................................................2215.00505000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTA............................................................2415.00505000
....................................................................................................................TGTGAGATTCTTCTATTCTACTTT..............................................................2415.00505000
.........................................................................................................................GATTCTTCTATTCTACTTTA.............................................................2015.00505000
............................................................................GTAGAATAGCAGGCTTAT............................................................................................................1814.00404000
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................2214.00401030
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................2114.00404000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCA............................................................2413.00303000
...........................................................................AGTAGAATAGCAGGCTTATCACATG......................................................................................................2513.00302010
......................................................................................................................TGAGATTCTTCTATTCTACTTTAT............................................................2413.00303000
...........................................................................AGTAGAATAGCAGGCTTATCAA.........................................................................................................2213.00301020
.............................................................................TAGAATAGCAGGCTTATCACATGA.....................................................................................................2413.00302010
...........................................................................AGTAGAATAGCAGGCTTATCACATGT.....................................................................................................2613.00300120
..................................................................................................TGTTCCCTTTACAACCGGTGT...................................................................................2113.00302010
.......................................................................................................................GAGATTCTTCTATTCTAC.................................................................1812.00202000
dp5
ATAT------------------------------------------G-GCTAGCACGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATC-----------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221324082.00324082171675451413041365310992032150145
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21122485.00224852190172816554452427000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22121377.0021377032202441099200000
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21119653.0019653118620713312600001
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................23114168.001416861953810582819265914811016
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2212778.00277811955243174346119003
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................2312267.00226701789316153314001
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................2112263.002263618951814020280003
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2011911.00191101897113000000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2011466.00146601259138441186000
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201914.009140874355000000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201802.00802167421428367004
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221660.00660065900100000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231505.0050504502524321000
..................................................................................................TGTTCCATTCA-ATCCGCTG....................................................................................191359.0035952621427510000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191229.002290186385000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................181213.002130183272100000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................221200.00200019901000000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................211171.001710514916100000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231159.001590845614302000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................211157.00157015700000000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................211156.0015608514129027000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................221139.001390271066000000
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................201136.00136013600000000
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................231134.00134013400000000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................191126.001261101308013000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................231125.00125012401000000
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................211123.00123049623000000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................191112.00112011200000000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24193.009307870602000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19169.0069031258401000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19164.006406400000000
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20152.005202428000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24149.004904521100000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22141.0041025142000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22140.004004000000000
............................................................................GTAGAATAGCAGGCTTATC...........................................................................................................19138.003803800000000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................23131.003124001906000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18126.002602500100000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18125.002502320000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20123.002301320800000
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23123.002301800401000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18122.002201810300000
......................................................................................................................TGAGATTCTTCTATTCTACTCC..............................................................22119.001900172000000
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................21119.001901400023000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23116.00160720403000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22116.001601500010000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................24216.003202363000000
......................................................................................................................TGAGATTCTTCTATTCTACTGC..............................................................22115.001500141000000
...................................................................................................GTTCCATTCA-ATCCGCTG....................................................................................18115.001501500000000
...........................................................................AGTAGAATAGCAGGCTTATCAA.........................................................................................................22114.001401100102000
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................22114.001401130000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................22114.001401400000000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................23112.00120600402000
..................................................................................................TGTTCCATTCA-ATCCGCTGT...................................................................................20111.001101100000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTAA............................................................23111.001101001000000
......................................................................................................................TGAGATTCTTCTATTCTACTG...............................................................21111.00110470000000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24110.00100900001000
............................................................................GTAGAATAGCAGGCTTAT............................................................................................................1819.0090900000000
droPer2
--------------------------------------------------------GATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTTAT-------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................22135214.0035214121347123407133
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................2113301.003301332970001
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2113133.0031339310516102
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2312197.002197756862287126274
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................211409.0040911295112288
..................................................................................................TGTTCCATTCA-ATCCGCTG....................................................................................191379.003793471418000
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231374.0037403731000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................201276.0027612675003
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................201260.0026002600000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................221258.0025812129970020
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201142.0014211410000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201121.00121863130136
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22197.00970970000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................23166.00660660000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................22154.005410431000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19150.005022980011
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................22143.00430430000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................22139.00390390000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................23131.00312604010
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18130.00307230000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................19129.00295231000
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................23127.00270270000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................23126.00260260000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22125.00251240000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................21124.00242114124
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19123.00230230000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23120.00201901000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23120.00200200000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19114.0014059000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24113.0013090004
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20112.00120120000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21112.00121110000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................1919.009090000
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................2219.009090000
...................................................................................................GTTCCATTCA-ATCCGCTG....................................................................................1819.009900000
..............................................................................................................ATCCGCTGTGAGATTCTTCT........................................................................2018.008701000
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................2017.007421000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................2416.006060000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................1816.006041001
.................................................................................................................CGCTGTGAGATTCTTCTATT.....................................................................2015.005500000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................2215.005050000
...............................................................................GAATAGCAGGCTTATCACA........................................................................................................1914.004310000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................1813.003021000
................................................................................................................CCGCTGTGAGATTCTTCTATTCTACTTT..............................................................2813.003300000
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................2213.003002001
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................2113.003020001
................................................................................................................CCGCTGTGAGATTCTTCTATT.....................................................................2112.002200000
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................2212.002020000
.......................................................................................................................GAGATTCTTCTATTCTACTTTC.............................................................2212.002020000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................2412.002020000
..................................................................................................TGTTCCATTCA-ATCCGCTGTGAGATTC............................................................................2712.002200000
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................2412.002020000
...........................................................................AGTAGAATAGCAGGCTTATCACATGTTCC..................................................................................................2912.002100001
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................1912.002020000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1811.001010000
.......................................................................................................................GAGATTCTTCTATTCTACTTA..............................................................2111.001010000
......................................................................................................................TGAGATTCTTCTATTCTACTCC..............................................................2211.001010000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCTG...........................................................2511.001010000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTA............................................................2411.001010000
........................................................................................................ATTCA-ATCCGCTGTGAGATT.............................................................................2011.001010000
.................................................................................ATAGCAGGCTTATCACATGTTCCA.................................................................................................2411.001001000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCTC...........................................................2511.001010000
....................................................................................................................TGTGAGATTCTTCTATTCTAC.................................................................2111.001010000
..............................................................................AGAATAGCAGGCTTATCAC.........................................................................................................1911.001001000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................2111.001010000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCG............................................................2411.001010000
droAna3
----------------------------------------------------------CCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACC-----------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221103289.0010328966351364241626426127
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2118510.00851075199261143911
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2317051.007051571617412995639298
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................2115730.00573056101200000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................2214101.0041014040610000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2212699.0026992263655219107193
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................2111281.0012811084421416512
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................201910.0091077988071521
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231700.007005851073050
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................201584.0058458220000
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201456.00456398580000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221455.0045544810132
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201326.0032626915361914
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231195.00195180150000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................211186.0018617710035
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................221175.0017517410000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191142.0014299430000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................221105.0010582230000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18189.008965240000
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20185.00858300020
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19182.008262000200
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................21176.007652440124
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23169.00695700264
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24164.00646300010
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................23155.00555500000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19149.004922222210
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................22147.00474610000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................23146.00464510000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19144.00444310000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24139.00393540000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................21136.00361350000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19132.00323020000
...........................................................................AGTAGAATAGCAGGCTTATCACAC.......................................................................................................24120.00202000000
............................................................................GTAGAATAGCAGGCTTATC...........................................................................................................19119.00191900000
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20118.00180180000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23117.00171160000
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................20117.00171121012
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24117.00171600010
.............................................................................TAGAATAGCAGGCTTATCACAGG......................................................................................................23116.00161212010
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................21116.00160160000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20116.0016930121
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22116.00161600000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................19115.00151400010
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18115.00151100301
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................22114.00141300010
...........................................................................AGTAGAATAGCAGGCTTT.............................................................................................................18113.00131100110
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................21111.0011800030
...........................................................................AGTAGAATAGCAGGCTTATCAA.........................................................................................................22111.0011910010
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18110.0010800011
.............................................................................TAGAATAGCAGGCTTATCACAG.......................................................................................................22110.0010601012
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................1819.009450000
........................................................................................................................AGATTCTTCTATTCTACTTC..............................................................2019.009090000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................2219.009900000
............................................................................GTAGAATAGCAGGCTTAT............................................................................................................1818.008800000
...........................................................................AGTAGAATAGCAGGCTTATCAG.........................................................................................................2218.008800000
...........................................................................AGTAGAATAGCAGGCTTATCACAG.......................................................................................................2417.007600010
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................2317.007700000
.........................................................................................................................GATTCTTCTATTCTACTTC..............................................................1925.00100100000
...........................................................................AGTAGAATAGCAGGCTTATT...........................................................................................................2015.005300101
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................2415.005500000
...........................................................................AGTAGAATAGCAGGCTTATCACAGGT.....................................................................................................2614.004310000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1814.004400000
...........................................................................AGTAGAATAGCAGGCTTATCACTT.......................................................................................................2414.004400000
droBip1
--------------------------------------------------------GACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACC-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------------GAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCAC---------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTGCT-----------------ATCCTCAAGGACTT--------------TCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCAC---------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GG-------------------------------TATTT---T----------CCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACAT-------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CC--------------------------TCAAGGACTT---T----------CCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACATAAG-----------AACAAGTGCAATTGAAAGGTAACSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------ATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCAC---------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------------------------------TCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCA----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TT-----------------------------------T---T----------CCGCGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCAC---------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------------GATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCC-----------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................22167120.0067120000042525148250030327223100000100042010041922501440036001000023421220141000001459222000000000000000000322146151029771421551161720248807226169173449459872675882839143607291136642020547480942957135893216981114675274208051090931581042303118192056186287001000160000000000000001692940478006215942012595391838300400149455447216101043908800000020418800100100001141998523748723710722942220172140000140065660006360003829893007060200060000100200000004915010140070000009414042925413652040317607414700223000200003000137017697357165180000001
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................23128719.0028719000005052138767000000000010100000000101000011000101500000017219850000000000000000000000176116494086006616194174001451161348324513120020516283553931550010100000000112000601311103122814000002000000000000000230700732147041510000015233944970000166044560000076671000000008644202123441261212000163006294433639000099527103590200016010000020000000165811109738001201000121604084503456344214122511702126455600161391031351100289101309112331236137515172755102000
......................................................................................................................TGAGATTCTTCTATTCTACTTTATC...........................................................25210325.50206510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139326719000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2114378.004378000006010966110000000001000001529129103100000100201115000000130631990000000000000000000100110520103901429401531417824575372031755105118324113191741970270200100150410001501100000000000002000000000000000113104000131466331501560000039102748300094014000000234000000000020241916041810152601530003000393701010001381280015700000000000000001000000000010002000000136182501320000250125710000000100001002305717752545000000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2213178.00317800000000042110000000000000000000000000000001000002000000312512000000000000000000000040212510017249011201716016327400000445140130000100000000001000000000021200000010000000000000000000004714100006000007212667000410320000004130020000005401761500415000000002000915017700002112300136010008000000010100000020800020000000004110517613123004402333001100100000014001172200160216462277001000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................2113058.00305800001000130100000000001000000000002000000000000001000000740000000000000000000000030293300072120110142350722000000002215251900000000100000000000000000210000000000000000000000000000001000000000000412945000230270000001700000000049131531000010000000000153134050000094000410100030000000000000002231801080000000001013873934062000213507061000060013000221001660109193202265186000000
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................2112138.002138000002000110000000000002000000000011000000000001000000000201450000000000000000000000101570001435001100324210323050000042604022100000000000000100001000100000000010000000000000000201002452030000000011826290003714600000061300200000021412648020000010000120042270360000124002800000000000000010000007020416003000000465526120406111098079970130504041000600920149112133159133000000
...........................................................................AGTAGAATAGCAGGCTTATCACAATC.....................................................................................................2611734.00173400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186548000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2011054.00105400000000002010000000000001001000007001000000110003000000391935000000000000000000000040020009120004025320021344000010620005000000000000000151001000000500010000000000000000000160400324241104000000113641350004001000000008000000000144642800010002000000001290660000114900101000000000000000000000000000010000000001758024000020015230000000000000200802715261920000000
......................................................................................................................TGAGATTCTTCTATTCTACTTATC............................................................241981.009810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657324000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACATC......................................................................................................251497.004970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348149000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201492.00492000000000000100000000000000010000032000000000000000000000303000000000000000000000000080003040000430102000010000100000000000000000003010000000010000000100000000000000000000001101000800000061120001204000000010000000000642560000000000002000840230000110001700000000000000000000000010102000000000494101600007091800000010000000001702518223423000000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................181444.0044400000000000000000000000000006131401000000000000000000000044262200000000000000000000000000000203000033123100000000000000000000000003115167534000001100000000000000000000000000010000041316000000000006000002000000000000000000049542900010000000000002100000000000000000000000000000000000000000000000000811040000101100000000000000000000301000000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................221297.0029700000912216418800000000000000000000000000000000000000000000000000000000000000000000100000001310110000100020210010010007203701000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000300000000000031000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................221293.00293000007001101411600000000000000000000000000000000000000000000000000000000000000000000901300012507004068200713002043213103200000000000000000000000000000000000000000000000000110000030100001000000001000000000000000000000000001001000000000010002100000012000000000000000000000000000000000000000000000020000100000000000000000000000000000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................201266.0026600000000000000000000000000000000003000000000000000000000410000000000000000000000000000000020100331000000000100000000000000000000000000000001000000000000000000000000000000000000000000000001000004030000000000000000004251000200000000000002201300005190014000000000000000000000000200000000000002104103000020420000000000000200110149184711000000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................191266.002660000000000000000000000000000220400000000000000000000000013711000000000000000000000000000001006000013913040000101020120700000000001303910436002106000000000000000000000000000402000520200100000010500000300000000000000000004420400000000000000001312000003004000000000000000000000000000000000000000504030000100000000000000000001020221000000
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................211240.002400000000000020000000000000000000000000000000000000000000023846000000000000000000000000010007018002012130016330000021101119010000000001010000000000010000000000000000000000003106000223401012000002000000000000000000000000000003100000000000000001002000012002000000000000000000000000000000000000000044010000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................191190.001900000000000000000000000010000000000100000000000100000000012070000000000000000000000006000020100105500240000000000000000000000000000000000000000000000000000000000000000020100010100000000000001100050300000000000000000001070000000000000000880200000000000000000000000000000011000000000000000311301000007031200001000000000007011211108000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231188.0018800000311230020000000000000000000000000000000000000000000000000000000000000000000020400001012123012202011501000005101111000000000001010000000100000000000000000000000000000220600162200000000001110000000000000031000000000012313030111000020001003000033002000000000000000000000000000000000000000215040000200100000000000000001022000000000
...........................................................................AGTAGAATAGCAGGCTTATCATC........................................................................................................231185.00185000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010281000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................231179.001790000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000100000000000000001000010000000000000000010100000000000000000000000000000000000000000000000000001000000000000000000050000000000000300023010000160050000000000000000000000000010100000000015397004000047018600000000000001000001110000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTATC...........................................................242157.00314000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023777000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................221155.0015500000100165450000000000000000000000000000000000000000000000000000000000000000000010000001130000000100010000004000100400000000000000000000000000000000000000000000000000010000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................191132.00132000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000200101110000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000226000000000000000034030000120000000000000000000000000100000100000000004110600006066000000000000000050756104000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231115.0011500000000000000000000000000000000000000000000000000000000000000000000000000000000010300002060010350002000000202101070000100000001000000000000000000000000000000000000000000001000000000000001000000000000002000000000000100102010100002828002102000001002000000000000000000000000000000000000000000010000000100000000000000000000100000000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................231112.001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000100000304000000010000000000110500000000000000003108000020003000000000000000000000020000000000000005130001000000100000000000000300501131254000000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................241106.0010600000000010000000000000000000000000000000000000000000000000000000000000000000000030480000010000220000000000001021030000000000000000000000000000000000000000000000000000000001000000000000010000000010000000000000000000000010000000003813000000000000001000000000000000000000110000010000000007111000000002100000000000001000000122000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231104.00104000000000110000000000000000000000000000000000000000000002553400000000000000000000000000000103000004000000000001000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000811000000000001000000000000000000000000000000000000000002001000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18198.00980000000000000000000000020000000000000000000000000000000010000000000000000000000000000000102000021000000000000000000000000000000010000000000000000000000000000000000000100000000000000000001211000001000000000000000000015500000000000041005810000000000000000000000000000000000000000000000001102090000306400100000000000000005316000000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24189.0089000000000000000000000000000000000000000000000000000000002338130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000033001001000000000000000000000000000000000000000000000000100010000101000000000000000000010001000000
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................20182.008200000100010000000000000000000000000000000000000000000000000000000000000000000000000000004014001061332210100010031020800000000000000000000000000000000000000000000000000010100050000000000000000000000000000000000000000001000000000000000002302000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................19174.00740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402100002356200100001110000400000000000000000000000000000000000000000000000000000100061100001000000000000000000000000000000000002100000000000000006000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCAATC.......................................................................................................24172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGTTTAATTCA-ATCTGCTG....................................................................................19171.00710000000000000000000000000000100000000000000000000000000001000000000000000000000000000000201001013000200000000000300000000000000000000000000001000000000000000000000000000000010101100000000100000000000000000000000000010000000010000000056010000020020000000000000000000000000000000000000071701010000100100000000000000000002002000000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................22164.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000089000004000030002110000000002220400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001001000000001000000000000000000000000000000000000001110010000100000000000000000001031003000000
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................20163.006300000000000000000000000000000000000000000000000000000000186220000000000000000000000000000020000000100200000000000000000000000000110000000000000000000000000000000000000010100200000000000001000000000000000000000000000012000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23154.0054000000000000000000000000000000000000000000000000000000000000000000000000000000000004000030000001000000000000000000100000000000000000000000000020000000000000000000000000000000000000000000200000000000000000000000000100000000000000001004004000002004000000000000000000000000000000000000005211030000101300001000000000000013012000000
.............................................................................TAGAATAGCAGGCTTATCACAT.......................................................................................................22152.0052000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000100011000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000011000000000000000002102000000001000000000000000000000000300000000000000410000000001100000000000001003035263000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000003000000301000004111100000000010000200000000000002000000000000000000000000000000000000010200050000000000000200000000000000000000000000103100000000000000000000000000000000000000000000000000000000000000000000300020000000100000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTC............................................................24142.004200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAT............................................................24141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23135.0035000000010000000000000000000000000000000000000000000000000000000000000000000000000002500000100001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000002000000000000000000001000003000000000000000000000000000000000000000001211010000101100000000000000001030111000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24133.0033000000000010000000000000000000000000000000000000000000000000000000000000000000000500000010000003400010100200200001200000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000002000000001000000001000000000000000000000000000000000000000000100000000000100000000000000000000110000000
.............................................................................TAGAATAGCAGGCTTATC...........................................................................................................18131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000009900000000000000000000000000000000000000000000000000000000000000000000300000000400000000000000100000010000000000
...........................................................................AGTAGAATAGCAGGCTTATCACATG......................................................................................................25127.002700000000000000000000000000000000000000000000000000000000111410000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCT...................................................................17124.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACAAT......................................................................................................25123.002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTC.............................................................22122.00220000000000000000000000000000000000000000000000000000000092110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAGAATAGCAGGCTTATCACC........................................................................................................21118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000200010000801100000000000000000000021000000
...........................................................................AGTAGAATAGCAGGCTT..............................................................................................................17117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTA...............................................................21117.0017000000000100000000000000000000000000000000000000000000000000000000000000000000000000000070100000000000100000000100200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCC..........................................................................................................21116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000002000000000000000000000000000000000000000000000000000000000000703100000000000000000000010000000
......................................................................................................................TGAGATTCTTCTATTCTACTCC..............................................................22116.00160000010000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAC............................................................24115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTAA..............................................................22114.0014000001000101000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACAAC......................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCTTCTATTCTACTTT..............................................................17214.002800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCG............................................................24114.0014000000000000000000000000000000000000000000000000000000003270000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTCA..............................................................22114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001001000000100000000000000000001011001000000
...............................................................................GAATAGCAGGCTTATCACA........................................................................................................19113.0013000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100030000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000002000000000000000000000000001000000000000
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000013000000000000000000000000001000101000000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................21112.0012000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000040100003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACAC.......................................................................................................24111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................22111.0011000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000001002000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................TAGAATAGCAGGCTTATCT..........................................................................................................19110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000010000201000000000000000002011000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCTC...........................................................2529.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AGATTCTTCTATTCTACTTTATC...........................................................2329.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTAGAATAGCAGGCTTATCACAATC.....................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGTTTAATTCA-ATCTGCTGT...................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100010000002000000000000000001000011000000
...........................................................................AGTAGAATAGCAGGCTTT.............................................................................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000010002000000
.................................................................................ATAGCAGGCTTATCACA........................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000060000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TGTGAGATTCTTCTATTCTACTT...............................................................2319.009000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000002200000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGTAGAATAGCAGGCTTATCAA.........................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000012000001000000001000000000000000000000000000000000000000000010000000100000000000000000001000000000
...........................................................................AGTAGAATAGCAGGCTTATCACTC.......................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTATC............................................................2328.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
--------------------------------------------------------GATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCC-----------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................22128651.00286513049666426179266371091002706564020000
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2319149.0091495958453522341541423291111463233506717021
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2117144.007144552223286337331870103003911000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCG............................................................2415480.0054800000490857200000000000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................1914165.00416502213368446400000000000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2013255.00325521763202593291017101700000
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................2112043.00204302220362000000100000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................181829.0082900057566600101000000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................221821.008215186781599327111510041304
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................201312.003120083020000000002000
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................201275.0027500024626300000000000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................211220.0022002235201276017200000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................231185.0018502615800000000100000
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................211151.00151119827110036719050207
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231133.001330211300000000000000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................231125.001251290000000103100000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................231104.001040002901000000200000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................181101.001010110851200000001001
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................23183.0083011810000000000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20177.0077012130000007000000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................20165.0065321934510000802000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................19152.0052023470000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTCG............................................................23143.0043000038500000000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18140.0040045310000000000000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................22138.00380222101000100200000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19138.0038000350300000000000
..................................................................................................TGTTCAATTCA-ATCTGCTG....................................................................................19138.00380312600000001700000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19136.00360001719000000000000
.......................................................................................................................GAGATTCTTCTATTCTAC.................................................................18132.0032000027500000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................23129.0029000290000000000000
......................................................................................................................TGAGATTCTTCTATT.....................................................................15127.0027000000025182000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24125.0025000240000010000000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19123.002300248300100202001
......................................................................................................................TGAGATTCTTCTATTCTACTTTCGA...........................................................25123.0023000023000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTG...............................................................21117.0017000170000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22117.001712580000010000000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24114.001400830000100100001
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................23114.0014000140000000000000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................23113.001310300000000900000
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................24111.001100900000000101000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................22110.001001090000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................2217.00700050000200000000
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................2317.00700020000000500000
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................2316.00601010000000400000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................2215.00500230000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTG..............................................................2114.00400040000000000000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1814.00400201100000000000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................2114.00400040000000000000
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................2214.00400020000000200000
........................................................................................................................AGATTCTTCTATTCTACTTTCG............................................................2214.00400001300000000000
...........................................................................AGTAGAATAGCAGGCT...............................................................................................................1613.00300000001020000000
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................2413.00300011000000100000
..........................................................................AAGTAGAATAGCAGGCTTATCA..........................................................................................................2213.00301000010000001000
..............................................................................................................ATCTGCTGTGAGATTCTTCTATT.....................................................................2313.00300300000000000000
...............................................................................................................TCTGCTGTGAGATTCTTCTATTCTACTTT..............................................................2913.00300300000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTG...............................................................2013.00300030000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................2213.00300030000000000000
...........................................................................................................................TTCTTCTATTCTACTTTCG............................................................1913.00300002100000000000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................1813.00300011100000000000
...........................................................................AGTAGAATAGCAGGCTTATCAA.........................................................................................................2213.00300110000000100000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................1912.00200010000010000000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................2112.00201010000000000000
...............................................................................GAATAGCAGGCTTATCACA........................................................................................................1912.00200010000000100000
............................................................................GTAGAATAGCAGGCTTATC...........................................................................................................1912.00200000000200000000
............................................................................GTAGAATAGCAGGCTTAT............................................................................................................1812.00200011000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTT............................................................2412.00200020000000000000
...........................................................................AGTAGAATAGCAGGCTTATCAT.........................................................................................................2212.00200000000000200000
...........................................................................AGTAGAATAGCAGGCTTATCG..........................................................................................................2112.00200200000000000000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................2112.00200020000000000000
................................................................................................................CTGCTGTGAGATTCTTCTATTCTACTTT..............................................................2812.00200200000000000000
...................................................................................................GTTCAATTCA-ATCTGCTG....................................................................................1812.00200110000000000000
...........................................................................AGTAGAATAGCAGGC................................................................................................................1512.00200000000110000000
....................................................................................................................TGTGAGATTCTTCTATTC....................................................................1812.00200002000000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................2112.00200020000000000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTCGAC..........................................................2611.00100001000000000000
droSec2
--------------------------------------------------------GATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGACT------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221121290.00121290119374362148569
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................2119144.0091449141210
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................2119058.0090588884787620
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2318937.008937225817724692215
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2211408.00140848934048297
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................2011124.0011241124000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................201802.0080275420235
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................201665.00665665000
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................211659.006596815542610
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................211515.005152481965912
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................231463.00463455143
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191179.00179179000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221171.00171166050
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................201162.0016227161181
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231152.00152150020
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201148.001486452275
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................23195.009595000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................18178.007878000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19173.0073441253
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................23173.007373000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22150.005049010
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19148.0048257160
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................19146.004646000
..................................................................................................TGTTCAATTCA-ATCTGCTG....................................................................................19141.0041140270
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19141.004141000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21138.003838000
......................................................................................................................TGAGATTCTTCTATTCTACTG...............................................................21134.003434000
.......................................................................................................................GAGATTCTTCTATTCTACTTG..............................................................21134.003434000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................19129.0029112142
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23129.002928100
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................22125.002525000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22125.002525000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................23125.002553170
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................22124.002424000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18118.001810080
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20118.001818000
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23117.00172591
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................24115.00157260
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24114.001414000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18113.00136151
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24113.00135611
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22112.001212000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24111.00114250
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23111.00113710
.............................................................................TAGAATAGCAGGCTTATCACAT.......................................................................................................2218.0081430
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................2217.0072140
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................2017.0072140
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................2317.0073040
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................2217.0077000
.............................................................................TAGAATAGCAGGCTTATC...........................................................................................................1816.0060051
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................2316.0061140
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................2115.0052300
..........................................................................AAGTAGAATAGCAGGCTTATCA..........................................................................................................2215.0053110
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................2215.0055000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................1815.0055000
.......................................................................................................................GAGATTCTTCTATTCTAC.................................................................1815.0055000
...........................................................................AGTAGAATAGCAGGCTTATT...........................................................................................................2014.0040400
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................2113.0033000
........................................................................................................................AGATTCTTCTATTCTACT................................................................1813.0033000
..............................................................................AGAATAGCAGGCTTATCAC.........................................................................................................1913.0033000
....................................................................................................................TGTGAGATTCTTCTATTCTACTT...............................................................2313.0032010
.............................................................................TAGAATAGCAGGCTTATCACT........................................................................................................2113.0032100
...........................................................................AGTAGAATAGCAGGCTTATCACATG......................................................................................................2513.0031110
...........................................................................AGTAGAATAGCAGGCTTATCACAC.......................................................................................................2413.0032010
droYak3
GAAT--T-----------------ATCCTTAAGGATTT---T----------CCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAACCC-----------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................222227250.504545011830910014447775914221070004
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21219690.0039380336479283425322100013
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21214248.002849602822227310000000
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................2227496.001499201891480120000000
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................2323070.506141943008897161416344761010
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2021565.00313003127300000000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2021293.50258722450115601130000
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................232970.0019400163330060010000
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................202718.501437013934400000000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................222716.5014333769256313210800000
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................232554.501109010951220000000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................222410.5082108061410000000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................222243.0048604018500000000
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................212224.004480339141941700010
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................212210.5042111295614801850100
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................192145.0029002494010000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................232141.002820279300000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................222141.0028202344800000000
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................232121.502430243000000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................182112.0022422012100000000
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................222103.502070204210000000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................192103.002060206000000000
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................20276.50153083431112130000
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24271.001420137310100000
..................................................................................................TGTTTAACTCA-ATCTGCTG....................................................................................19270.0014015154340000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20258.0011603422580020000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19257.001140114000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22255.501110111000000000
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................19243.5087075830100000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................21243.0086077900000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23235.00700551410000000
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................23229.505932716100030000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21225.0050050000000000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18221.5043043000000000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................19220.00400300000100000
..........................................................................AAGTAGAATAGCAGGCTTATCAC.........................................................................................................23218.50370161170030000
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22215.5031031000000000
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20214.5029012800000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................22214.5029029000000000
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................21214.0028042400000000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18213.0026025100000000
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24213.0026017610020000
.............................................................................TAGAATAGCAGGCTTATCACAT.......................................................................................................22212.0024018010050000
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20211.5023023000000000
....................................................................................................................TGTGAGATTCTTCTATTCTACT................................................................22211.0022013900000000
.............................................................................TAGAATAGCAGGCTTATCA..........................................................................................................19210.5021018020010000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................21210.5021021000000000
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23210.0020013310030000
..........................................................................AAGTAGAATAGCAGGCTTATCACA........................................................................................................2428.501706450020000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................2327.0014011120000000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................1826.5013013000000000
......................................................................................................................TGAGATTCTTCTATTCTACTGC..............................................................2225.5011001100000000
......................................................................................................................TGAGATTCTTCTATTCTACTTTTA............................................................2425.5011011000000000
droEre2
TT----------------------ATCCTTGAGGATTG---T----------CTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAACCC-----------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................................TGAGATTCTTCTATTCTACTTT..............................................................221435342.00435342276501157409673347622672
......................................................................................................................TGAGATTCTTCTATTCTACTT...............................................................21133163.0033163292683662629154440
.......................................................................................................................GAGATTCTTCTATTCTACTTT..............................................................21121683.00216832133035300000
...........................................................................AGTAGAATAGCAGGCTTATCACA........................................................................................................23113460.0013460495532513998588812810
......................................................................................................................TGAGATTCTTCTATTCTACTTC..............................................................22110569.0010569791049000000
......................................................................................................................TGAGATTCTTCTATTCTACT................................................................2012662.002662236512829127310
.......................................................................................................................GAGATTCTTCTATTCTACTT...............................................................2012151.0021512145600000
...........................................................................AGTAGAATAGCAGGCTTATCAC.........................................................................................................2212010.0020108627362484353860
......................................................................................................................TGAGATTCTTCTATTCTACTTTT.............................................................2311598.001598136322801330
........................................................................................................................AGATTCTTCTATTCTACTTT..............................................................2011533.00153314498400000
...........................................................................AGTAGAATAGCAGGCTTATCA..........................................................................................................2111030.001030465259477720
......................................................................................................................TGAGATTCTTCTATTCTACTTTA.............................................................231702.007026663200400
.............................................................................TAGAATAGCAGGCTTATCACA........................................................................................................211396.003967319160208350
...........................................................................AGTAGAATAGCAGGCTTATC...........................................................................................................201358.0035812415317141580
............................................................................GTAGAATAGCAGGCTTATCACA........................................................................................................221328.00328324001210
.....................................................................................................................GTGAGATTCTTCTATTCTACTTT..............................................................231230.00230230000000
.........................................................................................................................GATTCTTCTATTCTACTTT..............................................................191218.002181892900000
......................................................................................................................TGAGATTCTTCTATTCTACTTTG.............................................................231188.00188187100000
.......................................................................................................................GAGATTCTTCTATTCTACT................................................................191144.00144143100000
......................................................................................................................TGAGATTCTTCTATTCTACTTA..............................................................221140.00140835700000
......................................................................................................................TGAGATTCTTCTATTCTACTG...............................................................211134.00134134000000
.......................................................................................................................GAGATTCTTCTATTCTACTTTT.............................................................221122.00122122000000
..........................................................................................................................ATTCTTCTATTCTACTTT..............................................................181122.00122962600000
...........................................................................AGTAGAATAGCAGGCTTAT............................................................................................................191113.001133800362100
......................................................................................................................TGAGATTCTTCTATTCTAC.................................................................191105.001055629013520
..................................................................................................TGTTCCATTCA-ATCTGCTG....................................................................................191103.00103617031130
......................................................................................................................TGAGATTCTTCTATTCTACTTTAA............................................................24198.009893500000
.......................................................................................................................GAGATTCTTCTATTCTACTTG..............................................................21193.009392100000
........................................................................................................................AGATTCTTCTATTCTACTT...............................................................19188.008885300000
......................................................................................................................TGAGATTCTTCTATTCTACTTG..............................................................22182.0082681400000
......................................................................................................................TGAGATTCTTCTATTCTACTC...............................................................21169.006926700000
.......................................................................................................................GAGATTCTTCTATTCTACTTTA.............................................................22168.006867100000
......................................................................................................................TGAGATTCTTCTATTCTACTTTC.............................................................23167.0067561100000
............................................................................GTAGAATAGCAGGCTTATCAC.........................................................................................................21162.006262000000
.............................................................................TAGAATAGCAGGCTTATCAC.........................................................................................................20153.0053105024860
...........................................................................AGTAGAATAGCAGGCTTATCACT........................................................................................................23148.00481700015160
...........................................................................AGTAGAATAGCAGGCTTATCACAA.......................................................................................................24144.0044242001620
.......................................................................................................................GAGATTCTTCTATTCTACTTC..............................................................21131.003122900000
...........................................................................AGTAGAATAGCAGGCTTATCACC........................................................................................................23130.003011170200
......................................................................................................................TGAGATTCTTCTATTCTACC................................................................20130.003032700000
............................................................................GTAGAATAGCAGGCTTATCA..........................................................................................................20129.002929000000
......................................................................................................................TGAGATTCTTCTATTCTA..................................................................18128.0028111001150
...........................................................................AGTAGAATAGCAGGCTTATCACAT.......................................................................................................24122.0022100001020
...........................................................................AGTAGAATAGCAGGCTTATCACG........................................................................................................23118.00185101560
.............................................................................TAGAATAGCAGGCTTATCACATG......................................................................................................23118.00188202240
..............................................................................AGAATAGCAGGCTTATCACA........................................................................................................20117.00176001910
.....................................................................................................................GTGAGATTCTTCTATTCTACTT...............................................................22116.001616000000
...........................................................................AGTAGAATAGCAGGCTTA.............................................................................................................18113.00136101410
...........................................................................AGTAGAATAGCAGGCTTATCT..........................................................................................................21113.00133000910
.......................................................................................................................GAGATTCTTCTATTCTACTTTG.............................................................22112.001212000000
........................................................................................................................AGATTCTTCTATTCTACTTTT.............................................................21111.001111000000
.........................................................................................................................GATTCTTCTATTCTACTT...............................................................18111.001111000000

Generated: 10/20/2015 at 07:31 PM