dgr_43

GTTTAGTGTTTTTTCCCGCTTAAGCATCTTGCAATTTATATGGCTTGCAGTTATCTGCATTAACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGTTTTAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATTCTTGAGCTCCTCGATTTTGTTTATATATCTAAAGTGTTGAAAATTGGAAAGCGTCAACTAATTG ******************************************************.((..((.(((((..(((.(((.((.((((.((((((((((((..(((.....))).)))).)))))))))))).)).))).)))..))))).))..))...*******************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
.........................................................................................................................TATTGCACACCTCCCGGCCTAT........................................................................	22	0	1	20.00	20	20	0
.........................................................................................................................TATTGCACACCTCCCGGCCT..........................................................................	20	0	1	9.00	9	9	0
.........................................................................................................................TATTGCACACTTCCCGGCCTTT........................................................................	22	2	1	8.00	8	8	0
.........................................................................................................................TATTGCACACCTCCCGGCCTA.........................................................................	21	0	1	5.00	5	5	0
.......................................................................AGGATGGAAGCTGTGACAATAT..........................................................................................................................	22	0	1	5.00	5	0	5
.......................................................................AGGATGGAAGCTGTGACAATATG.........................................................................................................................	23	0	1	4.00	4	0	4
.........................................................................................................................TATTGCACACCTCCCGGCCTT.........................................................................	21	1	1	3.00	3	3	0
.......................................................................AGGATGGAAGCTGTGACAAT............................................................................................................................	20	0	1	3.00	3	1	2
.......................................................................AGGATGGAAGCTGTGACAA.............................................................................................................................	19	0	1	2.00	2	1	1
.......................................................................AGGATGGAAGCTGTGACAATA...........................................................................................................................	21	0	1	2.00	2	0	2
.........................................................................................................................TATTGCACACTTCCCGGCCTTTAA......................................................................	24	2	1	2.00	2	2	0
..........................................................................................................................ATTGCACACCTCCCGGCCT..........................................................................	19	0	1	2.00	2	2	0
.......................................................................AGCATGGAAGCTGTGACAATAT..........................................................................................................................	22	1	1	1.00	1	0	1
.......................................................................AGGATGGAAGCTGTGACGATA...........................................................................................................................	21	1	1	1.00	1	0	1
..........................................................................................................................ATTGCACACTTCCCGGCCTT.........................................................................	20	2	1	1.00	1	1	0
..........................................................................................................................ATTGCACACCTCCCGGCCTAT........................................................................	21	0	1	1.00	1	1	0
.........................................................................................................................TATTGCACACCTCCCGGCC...........................................................................	19	0	1	1.00	1	1	0
.........................................................................................................................TATTGCACACTTCCCGGCCTTTAAA.....................................................................	25	2	1	1.00	1	1	0
.......................................................................AGGATGGACGCTGTGACAATATA.........................................................................................................................	23	2	1	1.00	1	0	1
.......................................................................AGGATGGAAGCTGTGACCAA............................................................................................................................	20	2	1	1.00	1	0	1
.......................................................................AGGATGGAAGCTGTGACAATATGT........................................................................................................................	24	0	1	1.00	1	0	1
..........................................................................................................................ATTGCACACCTCCCGGCCTA.........................................................................	20	0	1	1.00	1	1	0
.......................................................................AGGATGGAAGCTGTGACA..............................................................................................................................	18	0	1	1.00	1	0	1
.......................................................................................................................TTTATTGCACATCTCCCGGCCTAC........................................................................	24	3	1	1.00	1	1	0
.........................................................................................................................TATTGCACATCTCCCGGCCTAC........................................................................	22	2	2	0.50	1	1	0

CAAATCACAAAAAAGGGCGAATTCGTAGAACGTTAAATATACCGAACGTCAATAGACGTAATTGGTAAAAGTCCTACCTTCGACACTGTTATACATCCAAAATTAATTAAATATAAAGTATATAACGTGTGGAGGGCCGGATATTTACTAAGAACTCGAGGAGCTAAAACAAATATATAGATTTCACAACTTTTAACCTTTCGCAGTTGATTAAC *******************************************************.((..((.(((((..(((.(((.((.((((.((((((((((((..(((.....))).)))).)))))))))))).)).))).)))..))))).))..))...******************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
...............................................GGCAATAGCCTTAATTGGT.....................................................................................................................................................	19	3	10	1.10	11	11
................................................GCAATAGCCTTAATTGGTA....................................................................................................................................................	19	3	19	0.16	3	3
.................................................CAATAGCCTTAATTGGTCA...................................................................................................................................................	19	3	13	0.08	1	1

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15245:17564401-17564615 +	dgr_43	confident	GTTTAGTG-TTTT----TTCCCGC----------------------------------------TTAAGCATCTTGCAATTTATATGGCTTGCAGTT--------------------------------------------------ATCTGC----------ATTA----------------------------------------------------------------------------------------------------------------------------------ACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGT----T--T-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATT-CTTGAGCTCCTCGATTT----------TGT------------TTATATATCTAAAGTGTTGA--AAATTGGAAAG------CGT------CAACTAATTG
droVir3	scaffold_12875:13668825-13669043 -	dvi-mir-311	Known_mirbase	GTCTAGTG-TTGTTCAATTCCC----------------------------------------------------------------GCCATGAAAAG-------------------TTAAAGCTGGAAAAACTAGTGC---------GTCCG-----------CATG----------------------------------------------------------------------------------------------------------------------------------ACCATTTTAAGGACGGTATTTGTGACAATATGTGCAG----T--T-AAATCAATTTGT--TTAGCATATTGCACATCTCCCGGCCTAAAAATGAAC-CGTGCTCTCTTCGAT-------ATATGGAACATTAAAACAATTTG------------------------GTAAATACTGCGCATAGCCTTGCGCCTTATG
droMoj3	scaffold_6496:9090388-9090605 -	dmo_21	confident	CTTTGCTA-TCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCCAAGTAAGTTTCAAAAGAAAAAACGAAAAATGTCAAATTTTCAGCT---------------------------------------------------GCGTTTGCAGGACGGTATTTGTGACAATATGAATTA----T--TGAAATCAATTTAT--TCAGCATATTGCACATCTCCCGGCCTATAAAACAGT-TGTGAGCCCGTCGATTTAAATGAT------------------TTGTGTATTTAAA--------------ATAAATTTTCACCATAAATATCGTTTAAATG
droWil2	scf2_1100000004513:3453282-3453422 +	dwi_40	confident	AAAAAGTG-TAAT----TT-AT----------------------------------------------------------------AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------TTATTCT----AA----TA-A-C-------------TCCCCATATTGCACCTTTTCCGGCCTCTAAATTAACTTTTGAACATCCCGG----------------G--------------TGGGGAAAAAGAAG-GAGTCAATGA--------------------CCACAAATTT
droAna3	scaffold_13266:4132832-4133057 +	dan-mir-311a	Known_mirbase	GGAAGGTTGCA-----------------------------------------ATGCGT--ATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAAC-AGCAGCG--------------ATCGCTATCTGAGAGAAATATTTGT------TGCCAG----------------------------------------------------------------------------------------------------------------------------------ATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT----T----T-------------CAAACATATTGCACTTATACCGGCCTGATGATCTCC-GGCG--CTCGTCATCTG----------TGAC--------------T-----AAAAGTGC-GA--AAATAGCAAAA------CAT------A------AAC
droBip1	scf7180000396427:2575557-2575777 +			GCAAAGC-------------------------------------------------GT--ATTTTTAATCGTATTGCACTTTCCCCAGCCCATAGATATTATGCGAAT-AGCAGCG--------------TCCGGTATGTGAGTGAAATATTTGT------GGCCAG----------------------------------------------------------------------------------------------------------------------------------ATACCCTTTAGGTCGGTATTTGTGACAATATGA---T----AT-T-T-------------CAATCATATTGCACTTGTACCGGCCTGATAATATCT-GGCA--TTCGTCATCTG----------TGAG--------------TCTGTGAAAAGTGC-GCG-AAATAT--------------------CAAAACATAA
droKik1	scf7180000302471:941304-941348 -			TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----TT-A-A-------------TATTTGTATTGCACACTTCCCGGCCTATGAATG--------------------------------------------------------------------------------------------------------
droFic1	scf7180000454039:1775891-1776144 -			TTTTTTAT-TTGT----TTCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGG--ATTTTTAAGCATATTGCACATTTACCGGCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATGCACTGGCTATTCATCAATTATT-TATGCAAATGCACAAAAACATTTGCAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTT-C-------------TAACTATATTGCACACTTCCCGGCCTATAAATGCGT-ATTGTGCTCACC---T-AAAATATCTGTGAAATCAAAAA-----------------------------------------------------AATAATTA
droEle1	scf7180000491201:735881-735955 -			A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGCGGGGTGGTGCGTCAATATATTTTG----TT-T-T-------------TATCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------
droRho1	scf7180000780104:81972-82050 -			A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGTAGGCGGGGTGGTGCGTCAATATATATATGTCGTT-T-T-------------TACCTATATTGCACACTTCCCGGCCTCTAAATG--------------------------------------------------------------------------------------------------------
droBia1	scf7180000302291:2816367-2816569 +			GGTGGGTGGCA-----------------------------------------ATGCGATGCTTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAAC-----TCGAGCAAGAAGCGTAAAAATCGGTTTAAA-------------------TGGT------TCCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTT-TAGGTTTA------------------AAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAAGCGCCTGCAAATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415401:99639-99709 -			-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGCAGGCTGGGTTGTGTGTTAATATATTGAT----T--T-T-------------AAGCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------
droEug1	scf7180000409474:1490171-1490359 +			TAATAGTTGTAGT----TT-TC----------------------------------------------------------------GGCTTATAAAG-------------------TTCCAGCAGAATAAATAAATAGTTGGGAGAGAACAGAGTTGAAATT-CCTAAATATTTTTAGGCCTGTGTCTGT-TCAATATAATTATTTAAA------------------AATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAAGTGAGTGCACGTACACA--AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2	2r:17040744-17040819 -	dsi-mir-310	Known_mirbase	T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTATATTTAC----TT-C-T-------------TAGCTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------
droSec2	scaffold_1:14025489-14025564 -	dse-mir-310	Known_mirbase	T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTGTATTTAC----TT-C-T-------------TAACTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------
droYak3	2R:12724847-12725051 +	dya-mir-310	Known_mirbase	ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAAGTGCTTGCAAATACACA--AACATTTGCAGGACGGGTCGTGTGGCAGTGTATTGAT----TT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATGTCC-AGTGT-TTCGAC---T-TGGATATCTGTGAAATCATAAA------------------------------------------------------------A
droEre2	scaffold_4845:10616443-10616608 -	der-mir-310a	Known_mirbase	ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAAGT-CTTGCAAATACACA--AATATTTGCAGGACGGGTCGTGTGTCAATGTATTGAT----CT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATG--------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

GTTTAGTG-TTTT----TTCCCGC----------------------------------------TTAAGCATCTTGCAATTTATATGGCTTGCAGTT--------------------------------------------------ATCTGC----------ATTA----------------------------------------------------------------------------------------------------------------------------------ACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGT----T--T-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATT-CTTGAGCTCCTCGATTT----------TGT------------TTATATATCTAAAGTGTTGA--AAATTGGAAAG------CGT------CAACTAATTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTAT.............................................................................................................	22	1	20.00	20	20	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCT...............................................................................................................	20	1	9.00	9	9	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTA..............................................................................................................	21	1	5.00	5	5	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATAT......................................................................................................................................................................	22	1	5.00	5	0	5
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATATG.....................................................................................................................................................................	23	1	4.00	4	0	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTT..............................................................................................................	21	1	3.00	3	3	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAAT........................................................................................................................................................................	20	1	3.00	3	1	2
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAA.........................................................................................................................................................................	19	1	2.00	2	1	1
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATA.......................................................................................................................................................................	21	1	2.00	2	0	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCT...............................................................................................................	19	1	2.00	2	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCTAT.............................................................................................................	21	1	1.00	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCC................................................................................................................	19	1	1.00	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATATGT....................................................................................................................................................................	24	1	1.00	1	0	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCTA..............................................................................................................	20	1	1.00	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACA..........................................................................................................................................................................	18	1	1.00	1	0	1

droVir3

GTCTAGTG-TTGTTCAATTCCC----------------------------------------------------------------GCCATGAAAAG-------------------TTAAAGCTGGAAAAACTAGTGC---------GTCCG-----------CATG----------------------------------------------------------------------------------------------------------------------------------ACCATTTTAAGGACGGTATTTGTGACAATATGTGCAG----T--T-AAATCAATTTGT--TTAGCATATTGCACATCTCCCGGCCTAAAAATGAAC-CGTGCTCTCTTCGAT-------ATATGGAACATTAAAACAATTTG------------------------GTAAATACTGCGCATAGCCTTGCGCCTTATG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	23	1	406466.00	406466	560	8	1293	295	393	56	254	35	450	57	487	452	860	961	0	0	0	1	0	6	180	0	1	462	1860	1647	6029	4839	1039	778	332	972	1944	73	1539	1883	2903	2418	406	89	213	454	332	210	154	120	115	57	145	76	101	52	38	32	32	1	0	109	133	163	1	14	0	1162	1385	39615	39967	48994	25793	24527	14688	18779	19487	25355	33293	9707	10647	24735	30218
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA.............................................................................................................	22	1	348798.00	348798	70	1	13409	7784	558	38	212	5	66	5	54	145	592	74	1	13	0	4	0	31	294	0	8	803	5535	4343	8835	7186	2528	1339	754	2114	7830	80	7929	6740	7980	7649	816	98	1032	2392	2075	1300	950	979	783	508	1032	295	578	239	152	132	102	7	3	428	307	463	8	28	2	1487	4425	9767	8748	9967	40996	37281	20424	22519	26118	29524	9172	2908	3202	5689	6853
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAA............................................................................................................	23	1	183276.00	183276	40	4	7354	5184	123	10	29	2	20	1	12	68	458	43	0	1	0	0	0	5	34	0	0	125	2951	1990	3379	2037	942	525	308	880	6000	21	5509	3675	9623	6187	280	9	326	741	637	441	315	259	254	173	352	70	147	74	38	29	26	0	2	38	83	198	1	4	0	2281	2335	10825	10365	8397	12593	11129	5431	6973	7129	8407	8358	6062	5339	6566	9049
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTA..............................................................................................................	21	2	112732.50	225465	371	11	9246	5864	542	67	282	36	134	15	110	202	917	141	0	5	0	1	2	9	712	3	2	1101	3186	2637	4193	3078	1754	1248	746	1946	7199	237	7575	7229	9043	6958	1687	194	1420	3433	2738	2178	1642	1852	1499	999	1906	537	1013	430	289	257	196	6	8	428	728	1090	9	31	0	104	1588	8770	6551	3981	17771	16133	11799	9614	13675	12694	4097	2662	3540	5897	5217
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAA...........................................................................................................	24	1	103384.00	103384	6	1	2794	966	24	1	3	1	7	0	4	22	223	23	0	0	0	0	0	0	4	0	0	40	1302	643	1511	504	107	68	37	133	2260	4	1774	2056	5060	2011	181	0	195	445	315	155	139	101	60	62	139	21	46	23	9	10	7	1	1	4	53	46	0	0	0	1417	1077	9446	8691	6004	3921	3630	1949	2365	2115	2809	5586	6823	5992	7446	10511
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAT......................................................................................................................................................................	22	1	91860.00	91860	465	13	287	190	15	7	7	2	68	23	142	11	26	28	0	0	0	0	0	1	6	0	2	13	255	177	522	351	250	183	107	262	259	4	314	177	619	357	14	6	85	181	158	123	91	108	70	68	104	58	119	75	35	36	39	0	1	15	216	27	0	3	0	295	257	12154	12161	13262	2254	2420	1270	1720	1574	2311	11062	3226	3448	7850	9821
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAA..........................................................................................................	25	1	60457.00	60457	2	1	1902	180	7	0	3	0	3	0	4	4	105	7	0	0	0	0	0	0	1	0	0	16	752	330	973	177	15	15	5	26	1107	1	754	1004	2984	796	101	2	45	130	80	37	15	13	7	5	21	5	7	7	2	3	0	0	0	2	12	21	0	0	0	995	640	6413	5831	3635	688	680	393	434	360	471	3282	5678	5022	5711	8535
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCT...............................................................................................................	20	2	48401.00	96802	149	7	8100	1638	463	138	359	30	134	28	162	111	882	113	0	4	0	2	1	4	735	4	1	1406	1609	1015	1794	932	949	799	452	1155	2332	294	3118	2052	6829	2461	3247	288	371	873	754	627	464	407	352	281	577	182	306	169	114	84	79	7	4	128	207	749	5	20	0	10	199	6473	5594	4398	1602	1403	1089	1086	1337	1564	4303	2656	2959	5532	6040
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAA.........................................................................................................	26	1	19354.00	19354	0	0	682	39	2	0	0	0	3	0	0	3	35	1	0	0	0	0	0	0	0	0	0	7	255	118	400	43	1	1	1	5	317	0	237	255	886	183	39	0	9	18	10	3	1	0	0	2	2	0	0	2	1	0	1	0	0	0	2	4	0	0	0	449	291	2050	1854	1023	117	130	70	76	64	99	957	1995	1806	1960	2845
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATA.....................................................................................................................................................................	23	1	9847.00	9847	27	1	17	10	0	0	0	1	0	0	6	5	7	7	0	0	0	0	0	0	1	0	0	1	15	15	32	23	3	4	6	2	23	0	21	14	45	28	1	0	62	154	98	90	55	54	55	40	102	33	43	34	16	19	12	0	1	11	56	1	0	0	0	22	8	1279	1241	1412	198	185	102	153	133	163	1079	354	374	861	1032
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATA.......................................................................................................................................................................	21	1	8564.00	8564	113	0	23	12	0	2	0	1	1	3	2	0	4	2	0	0	0	0	0	0	0	0	0	1	3	5	5	6	13	13	5	18	6	1	2	3	8	4	0	0	25	63	49	25	22	17	19	10	22	1	15	9	3	7	4	1	1	17	26	0	0	0	0	7	12	817	842	855	815	747	430	549	561	545	749	121	123	313	486
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGA....................................................................................................................................................................	24	1	7654.00	7654	8	0	37	11	6	0	4	1	4	0	3	3	4	8	0	0	0	0	0	0	2	0	0	4	75	64	178	120	27	15	9	24	121	3	105	157	261	137	17	3	1	2	0	0	0	1	0	2	0	1	1	0	0	0	0	0	0	1	1	5	0	0	0	31	40	1338	1371	936	21	20	8	15	13	24	626	229	234	611	711
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTG...................................................................................................................................................................	25	1	6377.00	6377	0	0	65	0	87	8	42	5	109	1	158	7	7	11	0	0	0	1	0	1	63	0	0	78	187	226	1118	1051	106	75	38	119	61	6	53	61	36	44	58	30	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	4	0	126	196	146	113	167	284	261	141	186	212	313	122	25	29	58	77
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAA........................................................................................................	27	1	5469.00	5469	0	0	319	8	1	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	98	43	160	19	0	0	0	1	92	0	104	60	293	48	9	0	1	6	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	2	1	0	0	0	192	104	527	469	240	25	22	8	11	9	14	227	553	526	510	753
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAT............................................................................................................	23	1	4335.00	4335	0	0	173	111	3	0	0	0	0	0	0	2	12	0	0	0	0	0	0	0	0	0	0	4	44	40	61	48	23	21	4	18	91	0	87	62	116	104	12	1	8	12	8	8	11	14	3	6	8	3	8	2	1	1	3	0	0	2	1	8	0	0	0	28	58	168	136	156	446	444	233	308	310	312	161	95	76	125	135
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGT....................................................................................................................................................................	24	1	3802.00	3802	15	0	17	8	5	1	6	4	38	2	27	6	14	29	0	0	0	0	0	0	6	0	0	9	25	34	121	103	11	10	7	17	42	0	30	47	79	51	12	2	3	6	4	14	3	8	6	0	7	4	5	9	3	3	3	0	0	1	6	10	0	0	0	19	23	451	382	339	144	155	134	115	84	140	288	85	78	211	281
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAAA..................................................................................................................................................................	26	1	3794.00	3794	0	0	39	2	3	0	2	0	2	0	9	6	33	8	0	0	0	0	0	0	0	0	0	3	46	41	236	58	1	0	2	1	91	0	85	110	341	84	23	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	7	0	0	0	66	32	631	565	306	8	11	6	3	14	6	205	76	86	238	305
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATAAA...................................................................................................................................................................	25	1	3032.00	3032	0	0	46	1	2	0	1	0	1	0	1	2	20	6	0	0	0	0	0	0	0	0	0	6	66	17	165	32	1	2	1	3	74	0	53	60	404	56	24	0	1	2	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	52	15	470	466	214	10	3	1	1	2	1	178	67	106	177	215
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCC................................................................................................................	19	2	2906.50	5813	62	1	296	120	17	3	7	2	3	0	2	0	9	1	0	0	0	0	0	1	15	0	0	53	75	34	49	21	30	30	16	25	66	9	74	58	156	47	51	5	21	46	35	21	20	18	14	15	26	7	12	7	6	2	6	0	0	5	11	7	1	0	1	15	69	242	117	183	615	611	428	465	474	411	170	28	46	171	149
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAG............................................................................................................	23	1	2692.00	2692	3	0	71	39	2	0	0	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	5	21	25	42	21	28	18	8	36	68	1	47	39	103	52	3	2	1	14	5	2	1	1	1	0	2	2	2	2	0	1	0	1	0	0	0	6	0	0	0	10	13	181	163	157	173	150	87	90	119	127	172	92	112	150	212
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAA...................................................................................................................................................................	25	1	2569.00	2569	2	0	12	3	1	0	0	0	1	0	0	1	6	5	0	0	0	0	0	0	0	0	0	1	21	21	90	43	3	1	0	2	72	0	57	83	216	85	7	0	0	1	0	1	0	0	1	0	2	0	0	0	0	1	0	0	0	0	1	2	0	0	0	23	12	435	411	229	18	20	8	13	5	18	181	64	77	133	180
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAC............................................................................................................	23	1	2489.00	2489	0	0	26	43	1	1	1	0	0	0	1	0	6	0	0	0	0	0	0	0	7	0	1	3	11	8	8	13	3	2	0	9	13	0	11	13	18	13	2	0	3	12	10	6	4	8	5	3	5	2	1	0	1	1	1	0	0	2	1	3	0	0	0	2	5	137	126	191	189	179	86	129	121	144	166	171	182	173	206
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATAA....................................................................................................................................................................	24	1	2017.00	2017	1	0	16	0	2	0	0	1	0	0	0	4	5	6	0	0	0	0	0	0	0	0	0	6	41	26	115	45	4	6	1	11	73	1	63	61	348	95	10	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	21	18	247	242	144	0	5	4	1	0	3	105	46	35	88	113
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAC.............................................................................................................	22	2	1958.50	3917	8	0	49	2354	19	2	11	0	0	0	3	0	2	0	0	1	0	0	0	0	16	0	0	33	13	12	18	8	5	7	2	6	24	6	18	12	31	14	30	4	4	12	2	2	1	2	4	2	3	2	1	0	1	0	0	0	0	0	3	10	0	0	0	8	9	128	94	134	156	140	48	65	83	111	89	15	21	28	31
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAC...........................................................................................................	24	1	1569.00	1569	2	0	13	25	1	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	1	4	3	2	2	10	3	7	7	7	1	4	5	9	6	3	0	9	7	22	3	2	5	6	0	2	1	1	2	0	3	0	0	0	1	1	3	0	0	0	5	6	151	128	133	29	31	26	27	30	34	112	152	154	158	206
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA.............................................................................................................	21	1	1405.00	1405	0	0	1116	54	1	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	6	1	11	5	3	1	0	3	13	0	6	10	10	8	2	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	8	5	6	2	21	18	24	10	21	19	3	2	3	4	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAC..........................................................................................................	25	1	1346.00	1346	0	0	6	7	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	0	0	0	0	5	0	1	6	15	1	2	0	0	3	3	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	114	125	136	4	15	2	5	2	8	102	131	141	237	263
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAT...........................................................................................................	24	1	1133.00	1133	0	0	24	34	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	11	9	8	9	11	12	6	21	25	0	15	17	48	27	0	0	0	4	11	9	3	5	3	0	4	2	5	1	0	0	0	0	0	0	0	0	0	0	0	4	8	47	63	48	106	62	28	55	32	74	53	68	52	48	59
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAG...........................................................................................................	24	1	1131.00	1131	0	0	23	12	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	0	0	0	3	4	8	5	2	1	0	2	11	0	16	13	25	12	4	0	1	3	5	1	3	2	0	3	1	0	4	1	0	0	0	0	0	1	0	1	0	0	0	4	7	84	80	74	73	41	29	39	47	66	69	72	61	92	121
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAC.........................................................................................................	26	1	865.00	865	0	0	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	1	0	1	2	6	1	1	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	77	69	59	2	2	0	0	0	1	51	91	115	185	179
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAA............................................................................................................	22	1	811.00	811	0	0	620	55	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	5	8	1	3	3	0	1	9	0	10	6	23	12	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	3	2	5	8	2	4	4	3	1	2	3	2	4
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATT.....................................................................................................................................................................	23	1	735.00	735	6	0	4	2	2	0	1	0	0	0	1	3	2	2	0	0	0	0	0	0	1	0	0	4	1	2	3	3	1	3	1	7	5	1	3	2	4	2	2	0	2	9	9	3	4	8	4	5	13	6	8	3	5	2	3	0	0	2	14	14	0	0	0	0	4	75	89	102	8	14	17	9	16	8	68	21	18	46	58
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCA...............................................................................................................	20	2	635.00	1270	0	0	230	17	2	0	3	0	3	0	1	1	19	3	0	0	0	0	0	0	2	0	0	10	25	8	28	9	2	3	3	1	14	1	23	16	146	32	76	1	0	2	0	0	0	2	0	0	1	0	2	0	0	0	0	0	0	0	0	6	1	0	0	0	8	163	147	83	1	2	3	1	0	3	77	13	11	31	34
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGC.................................................................................................................	18	2	627.50	1255	14	0	18	2	8	0	3	0	3	0	5	0	5	0	0	0	0	0	0	0	2	0	0	12	47	24	30	34	11	7	5	10	52	3	69	55	101	44	14	0	1	4	3	2	3	1	2	1	0	0	0	0	0	0	0	2	0	1	1	1	0	0	1	40	89	36	10	27	54	56	48	59	54	29	34	4	9	56	49
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAA.........................................................................................................................................................................	19	1	607.00	607	10	0	4	0	1	2	1	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	3	7	0	9	1	16	10	5	14	2	0	5	0	2	2	0	0	1	7	1	3	0	0	2	3	0	1	2	0	1	0	0	0	0	0	3	0	0	0	0	0	1	19	25	18	106	91	39	58	52	38	20	3	1	7	7
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTT..............................................................................................................	21	2	557.50	1115	16	0	223	93	7	0	1	0	2	0	0	2	2	1	0	0	0	0	0	0	5	0	0	6	16	14	15	13	36	27	16	39	15	2	20	15	41	7	5	5	2	5	9	8	4	4	4	3	10	2	5	2	0	2	1	0	0	3	5	5	0	0	0	1	3	27	19	12	45	49	54	39	59	49	4	6	4	19	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAAT........................................................................................................................................................................	20	1	509.00	509	10	1	7	2	3	1	1	0	1	2	0	0	4	0	0	1	0	0	0	0	7	0	0	3	4	8	11	6	16	23	11	21	7	2	7	3	15	11	2	4	1	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	4	3	77	75	30	6	2	0	1	0	2	25	17	13	29	26
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACA..........................................................................................................................................................................	18	1	447.00	447	10	0	3	0	3	0	2	1	1	1	2	0	1	3	0	0	0	0	0	0	3	0	0	3	1	2	7	3	5	5	4	6	2	1	4	3	4	8	4	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	44	40	42	13	41	17	9	18	19	44	3	7	27	22
.....................................................................................................................................................................................................................................................................................................................ACGGTATTTGTGACAATATG.....................................................................................................................................................................	20	1	394.00	394	2	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	9	71	67	34	52	40	82	7	0	0	5	6
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTA..............................................................................................................	20	2	393.50	787	1	0	641	27	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	1	2	2	2	0	0	0	2	5	0	9	8	5	6	1	0	0	0	0	0	0	0	0	2	1	0	2	0	1	0	0	0	0	0	0	2	0	0	0	0	2	0	3	2	3	8	12	7	6	8	1	1	3	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAC........................................................................................................	27	1	378.00	378	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	1	1	1	0	1	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	26	20	0	0	0	0	0	0	22	49	50	64	93
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTG..............................................................................................................	21	2	373.50	747	10	0	18	9	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	11	3	7	3	1	4	1	1	24	1	16	21	45	27	6	1	4	8	2	3	2	4	1	3	5	0	3	0	0	0	0	0	0	0	1	7	0	0	0	1	3	95	95	41	36	24	27	7	12	32	71	5	5	17	21
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG.............................................................................................................	22	2	362.00	724	7	0	60	27	2	0	2	0	0	0	0	0	5	1	0	0	0	0	0	0	4	0	0	3	13	5	12	7	4	15	8	11	10	0	5	8	17	10	7	1	2	1	1	1	0	2	1	0	2	0	1	1	0	1	0	0	0	1	4	2	0	0	0	7	9	40	33	30	34	40	19	8	18	27	20	37	38	47	53
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAT..........................................................................................................	25	1	353.00	353	0	0	6	11	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	6	1	4	0	0	1	0	4	8	0	11	12	27	3	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	1	4	32	24	21	3	2	2	6	6	15	38	25	18	17	34
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTC..............................................................................................................	21	2	344.50	689	12	1	150	10	33	7	7	1	0	0	2	0	12	0	0	0	0	0	0	0	42	0	0	52	5	3	4	1	22	12	11	19	3	26	3	1	5	0	63	20	0	6	9	3	1	4	1	3	3	1	2	0	0	1	0	0	0	2	0	11	0	6	0	0	0	4	5	3	11	14	20	13	17	11	6	3	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTAA..................................................................................................................................................................	26	1	304.00	304	0	0	5	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	4	24	7	0	1	0	1	14	0	16	18	38	16	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	32	27	18	0	1	0	0	0	0	26	3	5	15	18
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATC.....................................................................................................................................................................	23	1	304.00	304	19	0	4	3	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	2	3	3	3	4	5	2	2	0	0	0	0	1	0	0	3	13	8	4	6	5	6	1	7	2	3	13	6	3	5	0	0	2	14	0	0	0	0	2	2	10	1	10	17	17	17	16	22	18	7	5	0	1	4
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCT...............................................................................................................	19	2	295.00	590	0	0	526	9	1	0	0	0	1	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	4	0	1	4	10	3	4	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	2	0	1	0	0	1	0	0	3	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAA...........................................................................................................	23	1	294.00	294	0	0	215	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	3	0	0	0	0	0	4	0	3	5	9	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	3	1	2	1	3	1	0	2	1	3	3	6	5
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCC...............................................................................................................	20	2	286.50	573	13	0	22	286	5	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	1	0	0	2	1	0	1	0	2	2	0	2	4	1	0	0	5	0	6	0	0	3	0	1	1	0	1	0	2	0	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	41	21	68	9	7	1	2	0	11	21	3	2	5	10
.................................................................................................................................................................................................................................................................................................................AAGGACGGTATTTGTGACAATAT......................................................................................................................................................................	23	1	252.00	252	0	0	2	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	1	0	1	3	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	28	14	30	17	17	10	14	12	15	22	4	5	17	26
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGC....................................................................................................................................................................	24	1	244.00	244	4	0	1	5	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	4	5	4	3	3	3	0	0	3	2	1	2	1	0	0	6	0	1	0	0	0	2	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	6	18	10	21	24	12	10	12	11	27	9	3	4	3	17
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTA...................................................................................................................................................................	25	1	239.00	239	0	2	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	7	0	0	0	1	4	0	7	3	7	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	38	33	26	4	8	0	0	9	3	28	10	8	16	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAA......................................................................................................................................................................	22	1	231.00	231	1	0	5	0	0	1	1	1	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	1	4	1	4	2	25	23	15	35	5	1	3	2	8	10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	14	11	10	3	4	1	1	0	0	12	4	5	5	6
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTGA..................................................................................................................................................................	26	1	222.00	222	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	3	10	12	0	1	0	0	5	0	7	5	3	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	28	24	32	3	3	3	0	1	3	21	7	4	20	15
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATATG.....................................................................................................................................................................	22	1	221.00	221	0	0	147	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	5	1	0	0	2	2	0	2	1	5	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	3	4	5	3	1	6	1	4	2	7	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAAA.....................................................................................................................................................................	23	1	216.00	216	5	0	1	1	1	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	1	0	7	4	7	4	4	3	2	0	5	2	13	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	4	0	36	31	10	3	1	1	2	0	1	11	6	8	16	18
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAT.........................................................................................................	26	1	201.00	201	0	0	4	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	0	0	0	1	0	0	1	9	17	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	20	24	16	3	2	1	0	1	3	10	18	17	18	18
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAA..........................................................................................................	24	1	189.00	189	0	0	153	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	0	0	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	1	3	0	1	0	0	0	1	3	2	2	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAACA.........................................................................................................	26	1	188.00	188	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	17	89	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	8	3	6	0	1	0	0	0	2	10	6	3	11	7
................................................................................................................................................................................................................................................................................................................TAAGGACGGTATTTGTGACAATAT......................................................................................................................................................................	24	1	185.00	185	1	0	1	0	0	0	0	0	4	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2	0	0	0	0	0	0	1	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	8	39	7	2	3	7	4	6	36	9	5	12	15
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAA.............................................................................................................	20	1	177.00	177	0	0	74	17	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	4	1	7	4	1	0	0	1	9	0	5	10	9	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	2	5	4	2	2	0	1	0	0	1	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAG..........................................................................................................	25	2	159.00	318	0	0	8	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	1	1	0	0	0	5	0	4	4	10	2	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	28	22	21	26	10	7	8	8	9	23	20	22	29	36
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAAC.......................................................................................................	28	1	151.00	151	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	14	17	1	0	0	0	0	0	7	10	14	28	34
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAAA............................................................................................................	21	1	145.00	145	0	0	51	15	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	6	3	2	2	1	0	1	0	7	0	12	8	7	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	2	0	0	3	1	1	0	2	1	0	0	2
.................................................................................................................................................................................................................................................................................................................AAGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	24	1	143.00	143	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	2	1	0	0	0	1	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	5	9	24	19	4	6	12	3	13	13	2	2	9	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATC...........................................................................................................	24	1	135.00	135	4	0	11	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	5	9	2	9	0	1	0	0	0	0	0	0	0	4	3	4	1	1	1	1	2	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	2	0	0	13	10	7	5	6	20	1	0	3	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATT...........................................................................................................	24	1	128.00	128	0	0	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	7	17	21	10	13	7	17	7	1	1	1	3
....................................................................................................................................................................................................................................................................................................................GACGGTATTTGTGACAATATG.....................................................................................................................................................................	21	1	106.00	106	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	7	9	7	9	6	3	8	6	5	1	4	6	14
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAACA........................................................................................................	27	1	104.00	104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	13	29	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	4	3	0	1	0	0	0	0	4	4	8	6	13
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGG....................................................................................................................................................................	24	1	102.00	102	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	14	15	22	0	0	0	1	1	2	10	3	9	11	9
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATCC....................................................................................................................................................................	24	1	102.00	102	28	0	8	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	5	5	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	3	8	3	11	8	2	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAG.........................................................................................................	26	1	93.00	93	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	4	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	8	5	2	2	3	4	0	2	5	5	7	9	19
......................................................................................................................................................................................................................................................................................................................CGGTATTTGTGACAATATG.....................................................................................................................................................................	19	1	92.00	92	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	22	11	7	18	7	17	0	0	2	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGG..................................................................................................................	17	2	85.00	170	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	15	11	14	0	0	0	0	0	0	18	3	10	29	67
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTGT..................................................................................................................................................................	26	1	84.00	84	0	0	0	0	0	0	0	0	3	0	0	2	1	3	0	0	0	0	0	0	0	0	0	0	0	1	7	4	0	1	0	0	4	0	3	1	2	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	4	5	3	1	2	2	6	5	2	2	0	8
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAAA.........................................................................................................	25	1	83.00	83	0	0	71	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	5
...............................................................................................................................................................................................................................................................................................................................................................................GCACATCTCCCGGCCTAA.............................................................................................................	18	1	82.00	82	0	0	26	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	3	1	1	0	0	1	0	1	0	0	3	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	15	0	0	0	1	2	1	0	5	1	3	0	1	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCG...............................................................................................................	20	2	81.50	163	10	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	9	6	8	1	3	7	0	6	3	0	2	0	2	4	0	0	1	4	1	0	1	0	0	0	2	5	5	9	8	10	5	14	13	6	0	0	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAT........................................................................................................	27	1	81.00	81	0	0	6	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	0	1	0	6	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	13	8	1	0	0	0	0	0	1	4	6	11	2	10
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTC...................................................................................................................................................................	25	1	80.00	80	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	15	9	7	15	8	18	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGAC...........................................................................................................................................................................	17	1	76.00	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	11	19	0	0	0	0	0	0	18	1	1	8	9

droMoj3

CTTTGCTA-TCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCCAAGTAAGTTTCAAAAGAAAAAACGAAAAATGTCAAATTTTCAGCT---------------------------------------------------GCGTTTGCAGGACGGTATTTGTGACAATATGAATTA----T--TGAAATCAATTTAT--TCAGCATATTGCACATCTCCCGGCCTATAAAACAGT-TGTGAGCCCGTCGATTTAAATGAT------------------TTGTGTATTTAAA--------------ATAAATTTTCACCATAAATATCGTTTAAATG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAT.............................................................................................................	22	1	98033.00	98033	42391	2531	10	16	53028	57
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTA..............................................................................................................	21	2	17548.50	35097	12031	2076	21	17	20844	108
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATA............................................................................................................	23	1	10954.00	10954	2507	271	0	0	8173	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCT...............................................................................................................	20	2	8204.50	16409	7412	938	28	44	7799	188
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAA...........................................................................................................	24	1	4601.00	4601	1728	87	1	1	2783	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAA..........................................................................................................	25	1	3822.00	3822	3212	75	0	3	513	19
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAT.............................................................................................................	21	1	2956.00	2956	2276	2	0	0	678	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATT............................................................................................................	23	1	2262.00	2262	755	17	0	1	1488	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA.............................................................................................................	22	2	1986.00	3972	1546	77	1	1	2345	2
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	23	1	1845.00	1845	1029	153	0	2	642	19
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAA.........................................................................................................	26	1	1390.00	1390	1309	14	0	0	61	6
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAT......................................................................................................................................................................	22	1	1011.00	1011	271	76	1	0	662	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCC...............................................................................................................	20	2	903.50	1807	3	1	0	0	1803	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAAA........................................................................................................	27	1	662.00	662	654	0	0	0	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCC................................................................................................................	19	2	434.50	869	165	12	0	1	689	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATC............................................................................................................	23	1	417.00	417	207	2	0	0	203	5
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTA..............................................................................................................	20	2	389.50	779	602	5	0	0	168	4
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAT.............................................................................................................	20	1	288.00	288	139	0	0	0	149	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATA............................................................................................................	22	1	249.00	249	127	0	0	0	122	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCT...............................................................................................................	19	2	233.50	467	379	0	1	0	87	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAA..........................................................................................................	24	1	205.00	205	196	1	0	0	8	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATG............................................................................................................	23	1	167.00	167	85	5	0	0	77	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAA...........................................................................................................	23	1	157.00	157	107	1	0	0	49	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTT..............................................................................................................	21	2	144.50	289	147	10	0	1	126	5
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATATG.....................................................................................................................................................................	22	1	116.00	116	115	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTC..............................................................................................................	21	2	102.50	205	149	13	0	1	36	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAT...........................................................................................................	24	1	89.00	89	25	0	0	0	64	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATA.....................................................................................................................................................................	23	1	86.00	86	23	5	0	0	58	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATT............................................................................................................	22	1	82.00	82	54	0	0	0	28	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCA...............................................................................................................	20	2	81.00	162	117	3	0	1	41	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCTAT.............................................................................................................	23	1	80.00	80	76	0	0	0	4	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATA.......................................................................................................................................................................	21	1	79.00	79	24	2	0	0	52	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAA.........................................................................................................	25	1	71.00	71	67	0	0	0	4	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACATCTCCCGGCCTAT.............................................................................................................	19	1	54.00	54	30	2	0	0	22	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG.............................................................................................................	22	2	53.00	106	64	4	0	0	35	3
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA.............................................................................................................	21	2	52.50	105	76	0	0	0	29	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTT...........................................................................................................	24	1	46.00	46	9	0	0	0	36	1
...............................................................................................................................................................................................................................................................................................................................................................................GCACATCTCCCGGCCTAT.............................................................................................................	18	1	44.00	44	29	0	0	0	15	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCC...........................................................................................................	24	1	43.00	43	42	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCT...............................................................................................................	21	2	42.00	84	22	5	0	1	56	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGA....................................................................................................................................................................	24	1	39.00	39	16	5	0	0	18	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAC...........................................................................................................	24	1	39.00	39	12	2	0	0	25	0
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATAT......................................................................................................................................................................	21	1	38.00	38	37	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAC......................................................................................................................................................................	22	1	30.00	30	0	0	0	0	30	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAG...........................................................................................................	24	1	30.00	30	19	2	0	0	8	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTC...........................................................................................................	24	1	30.00	30	18	0	0	0	11	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGC.................................................................................................................	18	2	28.50	57	40	4	0	0	13	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGC....................................................................................................................................................................	24	1	28.00	28	7	3	0	0	18	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTA..............................................................................................................	19	2	27.50	55	34	0	0	0	21	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAAA........................................................................................................	26	1	27.00	27	27	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAAA..................................................................................................................................................................	26	1	27.00	27	24	3	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATA............................................................................................................	21	1	27.00	27	11	0	0	0	16	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCT...............................................................................................................	18	2	23.50	47	24	0	0	0	23	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAAT........................................................................................................................................................................	20	1	23.00	23	11	1	0	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTG..............................................................................................................	21	2	22.00	44	9	2	0	0	33	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATAA...........................................................................................................	22	1	20.00	20	7	0	0	0	13	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAT..........................................................................................................	25	1	20.00	20	10	0	0	0	10	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGT....................................................................................................................................................................	24	1	20.00	20	7	2	0	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAT.........................................................................................................	26	1	18.00	18	11	0	0	0	7	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCC...............................................................................................................	19	2	15.50	31	0	0	0	0	31	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAAA.....................................................................................................................................................................	23	1	15.00	15	12	1	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAC..........................................................................................................	25	1	15.00	15	4	0	0	0	11	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAA...................................................................................................................................................................	25	1	13.00	13	4	6	0	0	3	0
....................................................................................................................................................................................................................................................................................................................GACGGTATTTGTGACAATATG.....................................................................................................................................................................	21	1	13.00	13	11	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATC............................................................................................................	22	1	13.00	13	12	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATAAA..........................................................................................................	23	1	12.00	12	12	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGCC...................................................................................................................................................................	25	1	12.00	12	3	0	0	0	9	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAA......................................................................................................................................................................	22	1	11.00	11	8	1	0	0	1	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCTA..............................................................................................................	22	2	10.50	21	12	0	0	0	9	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCCC..........................................................................................................	25	1	10.00	10	10	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACATCTCCCGGCCTATA............................................................................................................	20	1	10.00	10	3	0	0	0	7	0

droWil2

AAAAAGTG-TAAT----TT-AT----------------------------------------------------------------AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------TTATTCT----AA----TA-A-C-------------TCCCCATATTGCACCTTTTCCGGCCTCTAAATTAACTTTTGAACATCCCGG----------------G--------------TGGGGAAAAAGAAG-GAGTCAATGA--------------------CCACAAATTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCT.............................................................................................................	22	1	4721.00	4721	17	2089	17	2585	13
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTC..............................................................................................................	21	1	1125.00	1125	13	381	11	716	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCT...............................................................................................................	20	1	1036.00	1036	13	357	11	649	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTA............................................................................................................	23	1	140.00	140	1	85	0	53	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCT.............................................................................................................	21	1	131.00	131	0	126	0	5	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTC..............................................................................................................	20	1	37.00	37	0	35	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCT...............................................................................................................	19	1	33.00	33	0	32	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCA.............................................................................................................	22	1	30.00	30	0	15	0	15	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTT............................................................................................................	23	1	26.00	26	0	14	1	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAA...........................................................................................................	24	1	22.00	22	0	20	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAA..........................................................................................................	25	1	20.00	20	1	13	0	6	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTA..............................................................................................................	21	1	17.00	17	0	6	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCC................................................................................................................	19	1	16.00	16	3	5	0	8	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATG......................................................................................................................................................................................	24	1	16.00	16	3	7	0	5	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTC..............................................................................................................	22	1	14.00	14	0	3	0	11	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCT...............................................................................................................	21	1	10.00	10	0	2	0	8	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTT..............................................................................................................	21	1	8.00	8	0	3	0	5	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCT.............................................................................................................	20	1	8.00	8	0	7	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTA............................................................................................................	22	1	7.00	7	0	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCC.............................................................................................................	22	1	7.00	7	0	3	0	4	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAAA.........................................................................................................	26	1	6.00	6	0	5	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCG.............................................................................................................	22	1	5.00	5	0	2	3	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTG............................................................................................................	23	1	4.00	4	1	2	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACCTTTTCCGGCCTCT.............................................................................................................	18	1	4.00	4	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTC............................................................................................................	23	1	4.00	4	0	1	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCAA...............................................................................................................	20	1	3.00	3	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCC...............................................................................................................	20	1	3.00	3	0	1	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCA...............................................................................................................	20	1	3.00	3	0	3	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAA........................................................................................................................................................................................	22	1	3.00	3	0	1	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAAAA........................................................................................................	27	1	2.00	2	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAAAAA........................................................................................................	26	1	2.00	2	0	2	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAAT.......................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCT...............................................................................................................	18	1	2.00	2	0	1	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACCTTTTCCGGCCTCT.............................................................................................................	19	1	2.00	2	0	2	0	0	0
.......................................................................................GGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATG......................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTCT.............................................................................................................	23	1	2.00	2	0	1	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAA...........................................................................................................	23	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTA..............................................................................................................	22	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCTT............................................................................................................	21	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCG................................................................................................................	19	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTAA.............................................................................................................	22	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCA...............................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGC.................................................................................................................	18	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAT...........................................................................................................	24	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCC.............................................................................................................	21	1	1.00	1	0	1	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAA..........................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCA.............................................................................................................	21	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAAA..........................................................................................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTTT...........................................................................................................	24	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCT................................................................................................................	19	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCTA............................................................................................................	21	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACCTTTTCCGGCCTC..............................................................................................................	18	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTG............................................................................................................	22	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTC..............................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCGT............................................................................................................	23	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTTG...........................................................................................................	24	1	1.00	1	0	0	0	1	0
..........................................................................................TTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------.............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................................................................GGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------.............................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAG...........................................................................................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCAAA.............................................................................................................	22	2	0.50	1	0	1	0	0	0
..........................................................................................TTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATAAA-------.............................................................................................................................................................................	22	9	0.11	1	0	0	0	1	0

droAna3

GGAAGGTTGCA-----------------------------------------ATGCGT--ATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAAC-AGCAGCG--------------ATCGCTATCTGAGAGAAATATTTGT------TGCCAG----------------------------------------------------------------------------------------------------------------------------------ATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT----T----T-------------CAAACATATTGCACTTATACCGGCCTGATGATCTCC-GGCG--CTCGTCATCTG----------TGAC--------------T-----AAAAGTGC-GA--AAATAGCAAAA------CAT------A------AAC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGA.............................................................................................................	22	1	104879.00	104879	12507	89224	3069	29	31	19
.......................................................................TATTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	34173.00	34173	2456	30922	783	2	1	9
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAA............................................................................................................	23	1	13773.00	13773	1049	12489	232	1	0	2
.......................................................................TATTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	10436.00	10436	1083	8865	473	6	1	8
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAA...........................................................................................................	24	1	8865.00	8865	1007	7771	87	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	8113.00	8113	385	7553	172	0	0	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCC................................................................................................................	19	1	8002.00	8002	9	7984	9	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	6649.00	6649	11	6633	4	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTG..............................................................................................................	21	1	6004.00	6004	1265	4440	280	5	8	6
.......................................................................TATTGCACTTTCCCCGGCCCATA................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2401.00	2401	301	2016	81	1	0	2
.......................................................................TATTGCACTTTCCCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1665.00	1665	169	1422	66	7	0	1
.......................................................................TATTGCACTTTCCCCGGCCCATT................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1574.00	1574	147	1378	45	1	0	3
.......................................................................TATTGCACTTTCCCCGGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1369.00	1369	297	1045	26	0	0	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGA.............................................................................................................	21	1	1128.00	1128	785	338	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCT...............................................................................................................	20	1	775.00	775	152	585	37	0	0	1
........................................................................ATTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	633.00	633	153	478	2	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	608.00	608	133	432	43	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAT............................................................................................................	23	1	560.00	560	54	493	7	0	5	1
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATATG.....................................................................................................................................................................	23	1	527.00	527	176	260	52	2	31	6
.......................................................................TATTGCACTTTCCCCGGCCCATAA...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	499.00	499	61	428	10	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGC.............................................................................................................	22	1	365.00	365	14	312	39	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGT.............................................................................................................	22	1	355.00	355	51	270	30	2	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAC............................................................................................................	23	1	312.00	312	9	302	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATAT......................................................................................................................................................................	22	1	205.00	205	18	172	12	0	3	0
.......................................................................TATTGCACTTTCCCCGGCCCATC................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	174.00	174	3	171	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	168.00	168	50	117	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCC...............................................................................................................	20	1	159.00	159	1	157	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGAA............................................................................................................	22	1	147.00	147	64	81	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAG............................................................................................................	23	1	146.00	146	20	121	3	0	1	1
.......................................................................TATTGCACTTTCCCCGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	137.00	137	15	115	7	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGAAA...........................................................................................................	23	1	122.00	122	65	57	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGA.............................................................................................................	20	1	117.00	117	36	81	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAT...........................................................................................................	24	1	114.00	114	6	108	0	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	103.00	103	11	91	1	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	102.00	102	1	101	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGG.............................................................................................................	22	1	98.00	98	32	59	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAC...........................................................................................................	24	1	92.00	92	8	79	5	0	0	0
........................................................................ATTGCACTTTCCCCGGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	89.00	89	21	67	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATTT...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	88.00	88	7	79	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTG..............................................................................................................	20	1	83.00	83	69	13	1	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCATA................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	69.00	69	29	37	3	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCT..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	68.00	68	7	58	3	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATG................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	62.00	62	5	56	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	49.00	49	7	42	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGCA............................................................................................................	23	1	47.00	47	1	34	12	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATTA...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	44.00	44	0	43	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCA...............................................................................................................	20	1	44.00	44	3	35	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGATA...........................................................................................................	24	1	43.00	43	3	37	1	2	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATAT...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	38.00	38	2	36	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTA..............................................................................................................	21	1	37.00	37	8	29	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCC................................................................................................................	18	1	37.00	37	0	37	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATATA.....................................................................................................................................................................	23	1	36.00	36	6	25	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGC.................................................................................................................	18	1	35.00	35	2	26	4	2	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATA.......................................................................................................................................................................	21	1	35.00	35	4	23	5	0	1	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGACA...........................................................................................................	24	1	35.00	35	2	30	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTT..............................................................................................................	21	1	34.00	34	4	25	5	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	33.00	33	11	19	3	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGAAA...........................................................................................................	22	1	32.00	32	4	27	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCC..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	31.00	31	1	19	11	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGTCAATATG.....................................................................................................................................................................	22	1	28.00	28	27	1	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	27.00	27	12	14	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGAA............................................................................................................	21	1	26.00	26	5	20	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGTA............................................................................................................	23	1	25.00	25	4	10	11	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCATT................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	23.00	23	6	17	0	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	22.00	22	0	22	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACTTATACCGGCCTGA.............................................................................................................	19	1	22.00	22	8	14	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	22.00	22	7	15	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGATT...........................................................................................................	24	1	21.00	21	9	12	0	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAAT................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	21.00	21	1	20	0	0	0	0
.......................................................................TATTGCACTTTCCCCGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	21.00	21	3	14	4	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	21.00	21	5	16	0	0	0	0
..........................................................................TGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	18.00	18	2	16	0	0	0	0

droBip1

GCAAAGC-------------------------------------------------GT--ATTTTTAATCGTATTGCACTTTCCCCAGCCCATAGATATTATGCGAAT-AGCAGCG--------------TCCGGTATGTGAGTGAAATATTTGT------GGCCAG----------------------------------------------------------------------------------------------------------------------------------ATACCCTTTAGGTCGGTATTTGTGACAATATGA---T----AT-T-T-------------CAATCATATTGCACTTGTACCGGCCTGATAATATCT-GGCA--TTCGTCATCTG----------TGAG--------------TCTGTGAAAAGTGC-GCG-AAATAT--------------------CAAAACATAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----TT-A-A-------------TATTTGTATTGCACACTTCCCGGCCTATGAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTTTTTAT-TTGT----TTCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGG--ATTTTTAAGCATATTGCACATTTACCGGCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATGCACTGGCTATTCATCAATTATT-TATGCAAATGCACAAAAACATTTGCAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTT-C-------------TAACTATATTGCACACTTCCCGGCCTATAAATGCGT-ATTGTGCTCACC---T-AAAATATCTGTGAAATCAAAAA-----------------------------------------------------AATAATTA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGCGGGGTGGTGCGTCAATATATTTTG----TT-T-T-------------TATCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGTAGGCGGGGTGGTGCGTCAATATATATATGTCGTT-T-T-------------TACCTATATTGCACACTTCCCGGCCTCTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GGTGGGTGGCA-----------------------------------------ATGCGATGCTTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAAC-----TCGAGCAAGAAGCGTAAAAATCGGTTTAAA-------------------TGGT------TCCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTT-TAGGTTTA------------------AAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAAGCGCCTGCAAATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGCAGGCTGGGTTGTGTGTTAATATATTGAT----T--T-T-------------AAGCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAATAGTTGTAGT----TT-TC----------------------------------------------------------------GGCTTATAAAG-------------------TTCCAGCAGAATAAATAAATAGTTGGGAGAGAACAGAGTTGAAATT-CCTAAATATTTTTAGGCCTGTGTCTGT-TCAATATAATTATTTAAA------------------AATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAAGTGAGTGCACGTACACA--AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droSim2

T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTATATTTAC----TT-C-T-------------TAGCTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTT.............................................................................................................	22	1	25506.00	25506	3	22	336	4507	2159	90	2658	2736	3533	3683	1506	1479	1186	1606	0	1	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTT..............................................................................................................	21	1	5419.00	5419	2	33	391	581	511	14	402	396	947	731	349	441	96	525	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	25	1	2995.00	2995	0	1	25	249	1	0	192	171	1446	865	27	8	8	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTA............................................................................................................	23	1	2479.00	2479	0	7	30	275	379	14	155	145	687	548	53	75	48	63	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCT...............................................................................................................	20	1	1872.00	1872	1	28	84	80	830	23	73	57	206	117	184	74	4	111	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA...........................................................................................................	24	1	1708.00	1708	0	2	62	313	47	2	92	83	488	472	36	48	46	17	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCC................................................................................................................	19	1	1693.00	1693	0	7	19	0	1422	49	8	9	19	20	137	1	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	26	1	1019.00	1019	0	0	4	66	0	0	104	84	500	256	4	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	21	1	606.00	606	0	0	0	0	0	0	94	152	35	21	0	0	67	237	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGC.................................................................................................................	18	1	432.00	432	0	1	6	0	262	11	10	4	15	27	96	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTT.............................................................................................................	21	1	337.00	337	0	0	0	258	31	0	5	2	9	9	2	8	3	10	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCG...................................................................................................................	16	1	241.00	241	0	0	0	0	0	0	1	0	1	4	235	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTAT......................................................................................................................................................................	22	1	226.00	226	0	0	2	7	70	4	0	0	0	0	135	7	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTA.............................................................................................................	22	1	216.00	216	0	1	3	23	0	0	8	10	86	50	10	15	4	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	210.00	210	0	0	1	24	0	0	29	20	81	55	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	20	1	193.00	193	0	0	8	3	15	1	27	46	8	9	66	4	1	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTT............................................................................................................	23	1	149.00	149	0	1	2	26	0	0	11	7	13	21	12	9	4	43	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTA.......................................................................................................................................................................	21	1	118.00	118	0	0	2	1	50	2	1	1	1	0	52	2	1	5	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	19	1	62.00	62	0	0	0	1	37	0	2	7	1	0	10	0	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGG..................................................................................................................	17	1	62.00	62	0	0	0	0	0	0	6	9	6	6	35	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATA.....................................................................................................................................................................	23	1	61.00	61	0	0	0	4	6	1	0	0	0	0	50	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCA..........................................................................................................................................................................	18	1	52.00	52	0	0	0	0	23	0	5	8	0	2	12	0	0	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTTT.............................................................................................................	18	1	46.00	46	0	0	0	0	0	0	0	0	0	0	45	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTT..............................................................................................................	20	1	44.00	44	0	0	0	29	8	1	0	0	1	1	1	1	0	2	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TTTAC----TT-C-T-------------TAGCTA...................................................................................................................................	15	1	41.00	41	0	0	0	0	0	0	15	12	1	13	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCC....................................................................................................................	15	1	35.00	35	0	0	0	0	0	0	0	0	0	0	35	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTC...........................................................................................................................................................................	17	1	33.00	33	0	0	0	0	0	0	6	7	0	0	20	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCC................................................................................................................	18	1	31.00	31	0	0	0	0	30	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGT............................................................................................................................................................................	16	1	30.00	30	0	0	0	0	0	0	1	1	0	0	28	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTT.............................................................................................................	23	1	24.00	24	0	0	0	2	0	0	0	0	0	0	2	0	11	9	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA...........................................................................................................	23	1	24.00	24	0	0	0	21	2	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAAA...................................................................................................................................................................	25	1	24.00	24	0	0	0	1	0	0	0	0	0	0	23	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTAA......................................................................................................................................................................	22	1	23.00	23	0	0	0	2	0	0	0	0	0	2	17	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTT.............................................................................................................	20	1	21.00	21	0	0	0	15	0	0	0	2	0	1	0	0	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTG............................................................................................................	23	1	20.00	20	0	0	4	11	0	0	0	0	0	2	2	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAA....................................................................................................................................................................	24	1	20.00	20	0	0	0	2	0	0	0	0	0	0	18	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCT...............................................................................................................	19	1	19.00	19	0	0	0	3	13	1	0	0	0	0	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTC............................................................................................................	23	1	18.00	18	0	0	0	1	0	0	2	3	6	2	0	1	0	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTA............................................................................................................	22	1	17.00	17	0	0	0	11	3	1	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT...........................................................................................................	24	1	16.00	16	0	0	0	2	0	0	0	1	4	3	0	3	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTC..............................................................................................................	21	1	16.00	16	1	1	11	0	0	0	0	1	0	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTC.............................................................................................................	22	1	14.00	14	0	2	2	1	0	0	0	1	1	2	3	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTT..............................................................................................................	17	1	13.00	13	0	0	0	0	0	0	0	0	0	2	11	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTA..............................................................................................................	21	1	13.00	13	0	0	0	1	0	0	1	0	5	1	1	2	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	24	1	13.00	13	0	0	0	11	0	0	0	0	1	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGTATA.....................................................................................................................................................................	18	1	12.00	12	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTG..............................................................................................................	21	1	11.00	11	0	0	4	4	0	0	1	0	0	0	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGA......................................................................................................................................................................	22	1	11.00	11	0	0	0	0	0	0	4	3	2	1	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCC...............................................................................................................	20	1	11.00	11	0	5	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTG.............................................................................................................	22	1	10.00	10	0	0	0	2	0	0	0	0	0	0	5	0	2	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTG.............................................................................................................................................................................	15	1	10.00	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTT.......................................................................................................................................................................	21	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTTT.............................................................................................................	19	1	9.00	9	0	0	0	3	2	0	0	0	0	0	3	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................ACACTTCCCGGCCTTT.............................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTT..............................................................................................................	22	1	7.00	7	0	0	0	1	0	0	0	0	0	0	0	0	0	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCG...............................................................................................................	20	1	7.00	7	0	1	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT...........................................................................................................	24	1	7.00	7	0	0	0	0	0	0	0	0	1	0	0	0	0	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG...........................................................................................................	24	1	7.00	7	0	0	3	1	0	0	0	0	2	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCA...............................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	0	3	0	2	0	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTA............................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTT............................................................................................................	22	1	5.00	5	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCT...............................................................................................................	16	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGTAT......................................................................................................................................................................	17	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCA................................................................................................................	19	1	5.00	5	0	0	0	0	0	0	1	1	1	1	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	25	1	4.00	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCA..........................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTTA............................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCC................................................................................................................	15	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................ACGGGTCGTGTGTCAGTAT......................................................................................................................................................................	19	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GGTCGTGTGTCAGTATA.....................................................................................................................................................................	17	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GCAGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAAAA..................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGG........................................................................................................................................................................	20	1	3.00	3	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GCAGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAA...........................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA..........................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAACA.........................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTTAA...........................................................................................................	25	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................CACACTTCCCGGCCTTT.............................................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TTTAC----TT-C-T-------------TAGCTAA..................................................................................................................................	16	3	2.00	6	0	0	0	0	0	0	2	1	1	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGT........................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................CTTCCCGGCCTTTAAA..........................................................................................................	16	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................CGGGTCGTGTGTCAGTAT......................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT.........................................................................................................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GGTCGTGTGTCAGTA.......................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTG.............................................................................................................	21	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTGTATTTAC----TT-C-T-------------TAACTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTT.............................................................................................................	22	1	12571.00	12571	12156	10	349	56
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTT..............................................................................................................	21	1	2018.00	2018	1803	5	186	24
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTT.............................................................................................................	21	1	731.00	731	731	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTA............................................................................................................	23	1	446.00	446	421	2	20	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCT...............................................................................................................	20	1	194.00	194	119	7	65	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA...........................................................................................................	24	1	154.00	154	126	0	26	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTT..............................................................................................................	20	1	82.00	82	81	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTT............................................................................................................	23	1	80.00	80	74	2	4	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	25	1	77.00	77	70	0	7	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTA.....................................................................................................................................................................	23	1	71.00	71	60	5	2	4
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTT.............................................................................................................	20	1	48.00	48	46	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTA.............................................................................................................	22	1	43.00	43	31	0	7	5
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTA............................................................................................................	22	1	24.00	24	24	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTG............................................................................................................	23	1	21.00	21	21	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	26	1	15.00	15	14	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTG..............................................................................................................	21	1	15.00	15	14	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGT......................................................................................................................................................................	22	1	15.00	15	12	1	1	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTT.............................................................................................................	23	1	13.00	13	13	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCC................................................................................................................	19	1	8.00	8	6	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCT...............................................................................................................	19	1	8.00	8	8	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	21	1	7.00	7	6	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTC.............................................................................................................	22	1	7.00	7	6	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTC............................................................................................................	23	1	7.00	7	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	6.00	6	4	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTT............................................................................................................	22	1	6.00	6	6	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTTT.............................................................................................................	18	1	6.00	6	6	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA...........................................................................................................	23	1	5.00	5	4	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTTT.............................................................................................................	19	1	5.00	5	5	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	24	1	4.00	4	4	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAGTGTA.....................................................................................................................................................................	22	1	4.00	4	4	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTA.............................................................................................................	21	1	4.00	4	4	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAGTGT......................................................................................................................................................................	21	1	3.00	3	3	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTT..............................................................................................................	19	1	3.00	3	2	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	20	1	3.00	3	3	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTT..............................................................................................................	22	1	3.00	3	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTA..............................................................................................................	21	1	3.00	3	0	0	3	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTG.............................................................................................................	21	1	3.00	3	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTC.............................................................................................................	21	1	3.00	3	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGC.................................................................................................................	18	1	2.00	2	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG...........................................................................................................	24	1	2.00	2	1	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTT..............................................................................................................	18	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTAAAA..................................................................................................................................................................	26	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTCTG..........................................................................................................	25	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTGGC..........................................................................................................	25	1	1.00	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTC............................................................................................................	22	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTA............................................................................................................	21	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTT.....................................................................................................................................................................	23	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT...........................................................................................................	24	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA..........................................................................................................	23	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC...........................................................................................................	24	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCC...............................................................................................................	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTAT............................................................................................................	23	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCA...............................................................................................................	20	1	1.00	1	0	0	1	0

droYak3

ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAAGTGCTTGCAAATACACA--AACATTTGCAGGACGGGTCGTGTGGCAGTGTATTGAT----TT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATGTCC-AGTGT-TTCGAC---T-TGGATATCTGTGAAATCATAAA------------------------------------------------------------A	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTT.............................................................................................................	22	1	30388.00	30388	0	19757	10171	446	3	9	2	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	22	1	29661.00	29661	307	9351	14039	5878	14	11	42	0	1	0	18
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	23	1	3321.00	3321	21	745	2354	199	0	0	1	1	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	21	1	2270.00	2270	93	952	665	545	1	1	13	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTT.............................................................................................................	21	1	2170.00	2170	0	2019	151	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	24	1	1775.00	1775	9	697	1008	56	1	0	4	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTT..............................................................................................................	21	1	1594.00	1594	0	907	611	74	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCC....................................................................................................................................................................................................................................................	19	1	1175.00	1175	38	7	1127	2	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTC.............................................................................................................	22	1	1155.00	1155	0	6	1149	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	21	1	670.00	670	0	591	62	17	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	23	1	549.00	549	32	242	249	21	0	1	3	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTA............................................................................................................	23	1	522.00	522	0	387	125	10	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA...........................................................................................................	24	1	337.00	337	0	262	68	7	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTT............................................................................................................	23	1	256.00	256	1	180	70	5	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	25	1	189.00	189	0	114	67	7	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTT.............................................................................................................	20	1	174.00	174	0	134	40	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGT.................................................................................................................................................................................................................................................	22	1	162.00	162	28	43	42	25	0	2	22	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	25	1	155.00	155	0	144	10	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	23	1	134.00	134	4	21	107	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	20	1	133.00	133	1	56	31	16	0	0	3	6	0	20	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	22	1	123.00	123	64	30	11	18	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTC..............................................................................................................	21	1	107.00	107	0	0	107	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTT..............................................................................................................	20	1	106.00	106	0	93	13	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCT...............................................................................................................	20	1	99.00	99	0	52	45	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGC.................................................................................................................................................................................................................................................	22	1	95.00	95	3	3	51	38	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGTA.....................................................................................................................................................................	23	1	86.00	86	0	84	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT...............................................................................................................................................................................................................................................	24	1	79.00	79	3	20	46	10	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	22	1	78.00	78	0	48	29	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	23	1	66.00	66	0	53	13	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	20	1	62.00	62	0	58	4	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTG.............................................................................................................	22	1	52.00	52	0	52	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGCCCTTT.............................................................................................................	23	1	49.00	49	0	47	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTA.............................................................................................................	22	1	45.00	45	0	31	13	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTG............................................................................................................	23	1	41.00	41	0	38	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGCCCTTT.............................................................................................................	19	1	40.00	40	0	29	11	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	20	1	37.00	37	0	28	9	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGCCCTTT.............................................................................................................	18	1	37.00	37	0	30	7	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTA............................................................................................................	22	1	34.00	34	0	33	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA...........................................................................................................	23	1	31.00	31	0	28	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	26	1	29.00	29	0	25	4	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	22	1	27.00	27	1	15	11	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT...........................................................................................................	24	1	26.00	26	0	24	1	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	26	1	26.00	26	0	25	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT...............................................................................................................................................................................................................................................	24	1	25.00	25	6	7	7	5	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTT............................................................................................................	22	1	25.00	25	0	22	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTC............................................................................................................	23	1	24.00	24	0	14	10	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC...............................................................................................................................................................................................................................................	24	1	23.00	23	0	4	18	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................CATTCACCGGCCTGA.................................................................................................................................................................................................................................................	15	1	22.00	22	0	0	0	0	0	0	0	0	0	0	22
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGT......................................................................................................................................................................	22	1	20.00	20	0	14	5	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG................................................................................................................................................................................................................................................	23	1	20.00	20	1	9	8	2	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCC................................................................................................................	19	1	19.00	19	0	10	8	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	18	1	19.00	19	1	10	4	4	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG...............................................................................................................................................................................................................................................	24	1	19.00	19	1	7	8	3	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTG.......................................................................................................................................................................	21	1	15.00	15	0	9	3	1	0	0	2	0	0	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	23	1	15.00	15	0	12	2	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA........................................................................................................	27	1	15.00	15	0	15	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGGCAGTGTA.....................................................................................................................................................................	22	1	12.00	12	0	12	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCC...............................................................................................................	20	1	12.00	12	1	0	11	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	24	1	12.00	12	0	12	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT................................................................................................................................................................................................................................................	23	1	11.00	11	9	2	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCC...................................................................................................................................................................................................................................................	20	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTTT...........................................................................................................	24	1	10.00	10	0	9	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTT..............................................................................................................	19	1	10.00	10	0	9	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.......................................................................................................	28	1	9.00	9	0	8	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG...........................................................................................................	24	1	9.00	9	0	9	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	19	1	9.00	9	0	7	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC...........................................................................................................	24	1	9.00	9	0	7	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTC.............................................................................................................	21	1	9.00	9	0	1	8	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGACT...............................................................................................................................................................................................................................................	24	1	8.00	8	2	3	2	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC..............................................................................................................................................................................................................................................	25	1	7.00	7	0	2	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAT...........................................................................................................	23	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	21	1	6.00	6	0	1	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGC.....................................................................................................................................................................................................................................................	18	1	6.00	6	0	0	3	2	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCC.................................................................................................................	18	1	6.00	6	0	4	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTT..................................................................................................................................................................................................................................................	21	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGC......................................................................................................................................................................	22	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	22	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	19	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	19	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGTAAA...................................................................................................................................................................	25	1	5.00	5	0	2	0	0	0	0	0	0	0	0	3
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTC.............................................................................................................	20	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTG............................................................................................................	22	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0

droEre2

ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAAGT-CTTGCAAATACACA--AATATTTGCAGGACGGGTCGTGTGTCAATGTATTGAT----CT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	22	1	15392.00	15392	13430	1010	1	859	29	59	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTT.............................................................................................................	22	1	13097.00	13097	10804	2134	1	131	16	11	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	24	1	1960.00	1960	1886	49	0	8	1	0	16
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	21	1	1896.00	1896	1721	57	0	72	14	32	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	23	1	1587.00	1587	1386	126	0	34	0	6	35
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTT..............................................................................................................	21	1	1101.00	1101	945	117	0	25	9	5	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTT.............................................................................................................	21	1	901.00	901	873	27	0	1	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	21	1	604.00	604	600	4	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	25	1	419.00	419	413	2	0	2	0	0	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA...........................................................................................................	24	1	334.00	334	310	22	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTA............................................................................................................	23	1	325.00	325	279	38	0	8	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	23	1	303.00	303	234	12	0	3	6	9	39
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	25	1	197.00	197	195	2	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	20	1	192.00	192	161	3	0	2	5	6	15
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTC.............................................................................................................	22	1	150.00	150	5	145	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	23	1	103.00	103	102	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGT.................................................................................................................................................................................................................................................	22	1	98.00	98	66	1	2	3	15	11	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	20	1	82.00	82	81	0	0	0	1	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	26	1	81.00	81	80	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	22	1	76.00	76	74	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTT............................................................................................................	23	1	72.00	72	60	8	2	1	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCT...............................................................................................................	20	1	70.00	70	53	13	0	0	1	3	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTT..............................................................................................................	20	1	69.00	69	69	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTT.............................................................................................................	20	1	68.00	68	63	5	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCC....................................................................................................................................................................................................................................................	19	1	59.00	59	13	44	0	0	0	1	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	26	1	53.00	53	52	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGTA.....................................................................................................................................................................	23	1	50.00	50	40	0	0	0	5	0	5
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	23	1	32.00	32	27	4	0	1	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	20	1	27.00	27	26	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTG............................................................................................................	23	1	26.00	26	26	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	26.00	26	26	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTA............................................................................................................	22	1	25.00	25	25	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA...........................................................................................................	23	1	25.00	25	25	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT...............................................................................................................................................................................................................................................	24	1	24.00	24	14	4	0	3	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTA.............................................................................................................	22	1	23.00	23	20	3	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTT..................................................................................................................................................................................................................................................	21	1	23.00	23	23	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	24	1	22.00	22	22	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	24	1	19.00	19	19	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGT......................................................................................................................................................................	22	1	17.00	17	11	1	1	0	3	1	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGC.................................................................................................................................................................................................................................................	22	1	17.00	17	7	3	0	7	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGCCCTTT.............................................................................................................	23	1	16.00	16	15	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	22	1	16.00	16	16	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG...............................................................................................................................................................................................................................................	24	1	15.00	15	14	0	0	0	1	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	22	1	14.00	14	9	1	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTC............................................................................................................	23	1	13.00	13	10	1	0	2	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG................................................................................................................................................................................................................................................	23	1	12.00	12	11	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATG.......................................................................................................................................................................	21	1	11.00	11	10	0	0	0	1	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	23	1	10.00	10	9	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC...............................................................................................................................................................................................................................................	24	1	9.00	9	9	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGCCCTTT.............................................................................................................	19	1	9.00	9	8	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTT............................................................................................................	22	1	7.00	7	7	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTA..............................................................................................................	21	1	7.00	7	7	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCC................................................................................................................	19	1	7.00	7	4	3	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTG..............................................................................................................	21	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC..............................................................................................................................................................................................................................................	25	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGC.....................................................................................................................................................................................................................................................	18	1	7.00	7	2	2	0	0	1	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	25	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT...............................................................................................................................................................................................................................................	24	1	6.00	6	5	0	0	0	0	1	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT................................................................................................................................................................................................................................................	23	1	6.00	6	3	0	0	0	0	3	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTA..................................................................................................................................................................................................................................................	21	1	6.00	6	6	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	25	1	6.00	6	6	0	0	0	0	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	19	1	5.00	5	5	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTC..............................................................................................................	21	1	5.00	5	0	5	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG...........................................................................................................	24	1	5.00	5	5	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTC.............................................................................................................	21	1	4.00	4	0	4	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTG.............................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTA.............................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAATGTA.....................................................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTG.............................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGTATTGAT----............................................................................................................................................................	28	1	4.00	4	0	0	0	0	0	0	4
..........................................................................................................................................................................................................................................TGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	19	1	4.00	4	4	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCC.................................................................................................................	18	1	4.00	4	4	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCC...................................................................................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAAG............................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCT...............................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	22	1	3.00	3	2	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAATGT......................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAC..........................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTTAA...........................................................................................................	22	1	3.00	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT..............................................................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT...........................................................................................................	24	1	3.00	3	2	1	0	0	0	0	0
...........................................................................................................................................................................................................................................GCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	18	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTG............................................................................................................	22	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG...........................................................................................................	24	1	3.00	3	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTT..............................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATC...............................................................................................................................................................................................................................................	24	1	2.00	2	1	1	0	0	0	0	0

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15245:17564401-17564615 +	dgr_43	confident	GTTTAGTG-TTTT----TTCCCGC----------------------------------------TTAAGCATCTTGCAATTTATATGGCTTGCAGTT--------------------------------------------------ATCTGC----------ATTA----------------------------------------------------------------------------------------------------------------------------------ACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGT----T--T-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATT-CTTGAGCTCCTCGATTT----------TGT------------TTATATATCTAAAGTGTTGA--AAATTGGAAAG------CGT------CAACTAATTG
droVir3	scaffold_12875:13668825-13669043 -	dvi-mir-311	Known_mirbase	GTCTAGTG-TTGTTCAATTCCC----------------------------------------------------------------GCCATGAAAAG-------------------TTAAAGCTGGAAAAACTAGTGC---------GTCCG-----------CATG----------------------------------------------------------------------------------------------------------------------------------ACCATTTTAAGGACGGTATTTGTGACAATATGTGCAG----T--T-AAATCAATTTGT--TTAGCATATTGCACATCTCCCGGCCTAAAAATGAAC-CGTGCTCTCTTCGAT-------ATATGGAACATTAAAACAATTTG------------------------GTAAATACTGCGCATAGCCTTGCGCCTTATG
droMoj3	scaffold_6496:9090388-9090605 -	dmo_21	confident	CTTTGCTA-TCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCCAAGTAAGTTTCAAAAGAAAAAACGAAAAATGTCAAATTTTCAGCT---------------------------------------------------GCGTTTGCAGGACGGTATTTGTGACAATATGAATTA----T--TGAAATCAATTTAT--TCAGCATATTGCACATCTCCCGGCCTATAAAACAGT-TGTGAGCCCGTCGATTTAAATGAT------------------TTGTGTATTTAAA--------------ATAAATTTTCACCATAAATATCGTTTAAATG
droWil2	scf2_1100000004513:3453282-3453422 +	dwi_40	confident	AAAAAGTG-TAAT----TT-AT----------------------------------------------------------------AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------TTATTCT----AA----TA-A-C-------------TCCCCATATTGCACCTTTTCCGGCCTCTAAATTAACTTTTGAACATCCCGG----------------G--------------TGGGGAAAAAGAAG-GAGTCAATGA--------------------CCACAAATTT
droAna3	scaffold_13266:4132832-4133057 +	dan-mir-311a	Known_mirbase	GGAAGGTTGCA-----------------------------------------ATGCGT--ATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAAC-AGCAGCG--------------ATCGCTATCTGAGAGAAATATTTGT------TGCCAG----------------------------------------------------------------------------------------------------------------------------------ATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT----T----T-------------CAAACATATTGCACTTATACCGGCCTGATGATCTCC-GGCG--CTCGTCATCTG----------TGAC--------------T-----AAAAGTGC-GA--AAATAGCAAAA------CAT------A------AAC
droBip1	scf7180000396427:2575557-2575777 +			GCAAAGC-------------------------------------------------GT--ATTTTTAATCGTATTGCACTTTCCCCAGCCCATAGATATTATGCGAAT-AGCAGCG--------------TCCGGTATGTGAGTGAAATATTTGT------GGCCAG----------------------------------------------------------------------------------------------------------------------------------ATACCCTTTAGGTCGGTATTTGTGACAATATGA---T----AT-T-T-------------CAATCATATTGCACTTGTACCGGCCTGATAATATCT-GGCA--TTCGTCATCTG----------TGAG--------------TCTGTGAAAAGTGC-GCG-AAATAT--------------------CAAAACATAA
droKik1	scf7180000302471:941304-941348 -			TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----TT-A-A-------------TATTTGTATTGCACACTTCCCGGCCTATGAATG--------------------------------------------------------------------------------------------------------
droFic1	scf7180000454039:1775891-1776144 -			TTTTTTAT-TTGT----TTCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGG--ATTTTTAAGCATATTGCACATTTACCGGCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATGCACTGGCTATTCATCAATTATT-TATGCAAATGCACAAAAACATTTGCAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTT-C-------------TAACTATATTGCACACTTCCCGGCCTATAAATGCGT-ATTGTGCTCACC---T-AAAATATCTGTGAAATCAAAAA-----------------------------------------------------AATAATTA
droEle1	scf7180000491201:735881-735955 -			A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGCGGGGTGGTGCGTCAATATATTTTG----TT-T-T-------------TATCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------
droRho1	scf7180000780104:81972-82050 -			A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGTAGGCGGGGTGGTGCGTCAATATATATATGTCGTT-T-T-------------TACCTATATTGCACACTTCCCGGCCTCTAAATG--------------------------------------------------------------------------------------------------------
droBia1	scf7180000302291:2816367-2816569 +			GGTGGGTGGCA-----------------------------------------ATGCGATGCTTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAAC-----TCGAGCAAGAAGCGTAAAAATCGGTTTAAA-------------------TGGT------TCCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTT-TAGGTTTA------------------AAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAAGCGCCTGCAAATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415401:99639-99709 -			-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGCAGGCTGGGTTGTGTGTTAATATATTGAT----T--T-T-------------AAGCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------
droEug1	scf7180000409474:1490171-1490359 +			TAATAGTTGTAGT----TT-TC----------------------------------------------------------------GGCTTATAAAG-------------------TTCCAGCAGAATAAATAAATAGTTGGGAGAGAACAGAGTTGAAATT-CCTAAATATTTTTAGGCCTGTGTCTGT-TCAATATAATTATTTAAA------------------AATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAAGTGAGTGCACGTACACA--AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2	2r:17040744-17040819 -	dsi-mir-310	Known_mirbase	T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTATATTTAC----TT-C-T-------------TAGCTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------
droSec2	scaffold_1:14025489-14025564 -	dse-mir-310	Known_mirbase	T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTGTATTTAC----TT-C-T-------------TAACTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------
droYak3	2R:12724847-12725051 +	dya-mir-310	Known_mirbase	ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAAGTGCTTGCAAATACACA--AACATTTGCAGGACGGGTCGTGTGGCAGTGTATTGAT----TT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATGTCC-AGTGT-TTCGAC---T-TGGATATCTGTGAAATCATAAA------------------------------------------------------------A
droEre2	scaffold_4845:10616443-10616608 -	der-mir-310a	Known_mirbase	ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAAGT-CTTGCAAATACACA--AATATTTGCAGGACGGGTCGTGTGTCAATGTATTGAT----CT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATG--------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

GTTTAGTG-TTTT----TTCCCGC----------------------------------------TTAAGCATCTTGCAATTTATATGGCTTGCAGTT--------------------------------------------------ATCTGC----------ATTA----------------------------------------------------------------------------------------------------------------------------------ACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGT----T--T-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATT-CTTGAGCTCCTCGATTT----------TGT------------TTATATATCTAAAGTGTTGA--AAATTGGAAAG------CGT------CAACTAATTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTAT.............................................................................................................	22	1	20.00	20	20	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCT...............................................................................................................	20	1	9.00	9	9	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTA..............................................................................................................	21	1	5.00	5	5	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATAT......................................................................................................................................................................	22	1	5.00	5	0	5
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATATG.....................................................................................................................................................................	23	1	4.00	4	0	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCCTT..............................................................................................................	21	1	3.00	3	3	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAAT........................................................................................................................................................................	20	1	3.00	3	1	2
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAA.........................................................................................................................................................................	19	1	2.00	2	1	1
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATA.......................................................................................................................................................................	21	1	2.00	2	0	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCT...............................................................................................................	19	1	2.00	2	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCTAT.............................................................................................................	21	1	1.00	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACCTCCCGGCC................................................................................................................	19	1	1.00	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACAATATGT....................................................................................................................................................................	24	1	1.00	1	0	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACCTCCCGGCCTA..............................................................................................................	20	1	1.00	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGATGGAAGCTGTGACA..........................................................................................................................................................................	18	1	1.00	1	0	1

droVir3

GTCTAGTG-TTGTTCAATTCCC----------------------------------------------------------------GCCATGAAAAG-------------------TTAAAGCTGGAAAAACTAGTGC---------GTCCG-----------CATG----------------------------------------------------------------------------------------------------------------------------------ACCATTTTAAGGACGGTATTTGTGACAATATGTGCAG----T--T-AAATCAATTTGT--TTAGCATATTGCACATCTCCCGGCCTAAAAATGAAC-CGTGCTCTCTTCGAT-------ATATGGAACATTAAAACAATTTG------------------------GTAAATACTGCGCATAGCCTTGCGCCTTATG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	23	1	406466.00	406466	560	8	1293	295	393	56	254	35	450	57	487	452	860	961	0	0	0	1	0	6	180	0	1	462	1860	1647	6029	4839	1039	778	332	972	1944	73	1539	1883	2903	2418	406	89	213	454	332	210	154	120	115	57	145	76	101	52	38	32	32	1	0	109	133	163	1	14	0	1162	1385	39615	39967	48994	25793	24527	14688	18779	19487	25355	33293	9707	10647	24735	30218
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA.............................................................................................................	22	1	348798.00	348798	70	1	13409	7784	558	38	212	5	66	5	54	145	592	74	1	13	0	4	0	31	294	0	8	803	5535	4343	8835	7186	2528	1339	754	2114	7830	80	7929	6740	7980	7649	816	98	1032	2392	2075	1300	950	979	783	508	1032	295	578	239	152	132	102	7	3	428	307	463	8	28	2	1487	4425	9767	8748	9967	40996	37281	20424	22519	26118	29524	9172	2908	3202	5689	6853
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAA............................................................................................................	23	1	183276.00	183276	40	4	7354	5184	123	10	29	2	20	1	12	68	458	43	0	1	0	0	0	5	34	0	0	125	2951	1990	3379	2037	942	525	308	880	6000	21	5509	3675	9623	6187	280	9	326	741	637	441	315	259	254	173	352	70	147	74	38	29	26	0	2	38	83	198	1	4	0	2281	2335	10825	10365	8397	12593	11129	5431	6973	7129	8407	8358	6062	5339	6566	9049
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTA..............................................................................................................	21	2	112732.50	225465	371	11	9246	5864	542	67	282	36	134	15	110	202	917	141	0	5	0	1	2	9	712	3	2	1101	3186	2637	4193	3078	1754	1248	746	1946	7199	237	7575	7229	9043	6958	1687	194	1420	3433	2738	2178	1642	1852	1499	999	1906	537	1013	430	289	257	196	6	8	428	728	1090	9	31	0	104	1588	8770	6551	3981	17771	16133	11799	9614	13675	12694	4097	2662	3540	5897	5217
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAA...........................................................................................................	24	1	103384.00	103384	6	1	2794	966	24	1	3	1	7	0	4	22	223	23	0	0	0	0	0	0	4	0	0	40	1302	643	1511	504	107	68	37	133	2260	4	1774	2056	5060	2011	181	0	195	445	315	155	139	101	60	62	139	21	46	23	9	10	7	1	1	4	53	46	0	0	0	1417	1077	9446	8691	6004	3921	3630	1949	2365	2115	2809	5586	6823	5992	7446	10511
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAT......................................................................................................................................................................	22	1	91860.00	91860	465	13	287	190	15	7	7	2	68	23	142	11	26	28	0	0	0	0	0	1	6	0	2	13	255	177	522	351	250	183	107	262	259	4	314	177	619	357	14	6	85	181	158	123	91	108	70	68	104	58	119	75	35	36	39	0	1	15	216	27	0	3	0	295	257	12154	12161	13262	2254	2420	1270	1720	1574	2311	11062	3226	3448	7850	9821
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAA..........................................................................................................	25	1	60457.00	60457	2	1	1902	180	7	0	3	0	3	0	4	4	105	7	0	0	0	0	0	0	1	0	0	16	752	330	973	177	15	15	5	26	1107	1	754	1004	2984	796	101	2	45	130	80	37	15	13	7	5	21	5	7	7	2	3	0	0	0	2	12	21	0	0	0	995	640	6413	5831	3635	688	680	393	434	360	471	3282	5678	5022	5711	8535
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCT...............................................................................................................	20	2	48401.00	96802	149	7	8100	1638	463	138	359	30	134	28	162	111	882	113	0	4	0	2	1	4	735	4	1	1406	1609	1015	1794	932	949	799	452	1155	2332	294	3118	2052	6829	2461	3247	288	371	873	754	627	464	407	352	281	577	182	306	169	114	84	79	7	4	128	207	749	5	20	0	10	199	6473	5594	4398	1602	1403	1089	1086	1337	1564	4303	2656	2959	5532	6040
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAA.........................................................................................................	26	1	19354.00	19354	0	0	682	39	2	0	0	0	3	0	0	3	35	1	0	0	0	0	0	0	0	0	0	7	255	118	400	43	1	1	1	5	317	0	237	255	886	183	39	0	9	18	10	3	1	0	0	2	2	0	0	2	1	0	1	0	0	0	2	4	0	0	0	449	291	2050	1854	1023	117	130	70	76	64	99	957	1995	1806	1960	2845
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATA.....................................................................................................................................................................	23	1	9847.00	9847	27	1	17	10	0	0	0	1	0	0	6	5	7	7	0	0	0	0	0	0	1	0	0	1	15	15	32	23	3	4	6	2	23	0	21	14	45	28	1	0	62	154	98	90	55	54	55	40	102	33	43	34	16	19	12	0	1	11	56	1	0	0	0	22	8	1279	1241	1412	198	185	102	153	133	163	1079	354	374	861	1032
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATA.......................................................................................................................................................................	21	1	8564.00	8564	113	0	23	12	0	2	0	1	1	3	2	0	4	2	0	0	0	0	0	0	0	0	0	1	3	5	5	6	13	13	5	18	6	1	2	3	8	4	0	0	25	63	49	25	22	17	19	10	22	1	15	9	3	7	4	1	1	17	26	0	0	0	0	7	12	817	842	855	815	747	430	549	561	545	749	121	123	313	486
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGA....................................................................................................................................................................	24	1	7654.00	7654	8	0	37	11	6	0	4	1	4	0	3	3	4	8	0	0	0	0	0	0	2	0	0	4	75	64	178	120	27	15	9	24	121	3	105	157	261	137	17	3	1	2	0	0	0	1	0	2	0	1	1	0	0	0	0	0	0	1	1	5	0	0	0	31	40	1338	1371	936	21	20	8	15	13	24	626	229	234	611	711
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTG...................................................................................................................................................................	25	1	6377.00	6377	0	0	65	0	87	8	42	5	109	1	158	7	7	11	0	0	0	1	0	1	63	0	0	78	187	226	1118	1051	106	75	38	119	61	6	53	61	36	44	58	30	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	4	0	126	196	146	113	167	284	261	141	186	212	313	122	25	29	58	77
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAA........................................................................................................	27	1	5469.00	5469	0	0	319	8	1	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	98	43	160	19	0	0	0	1	92	0	104	60	293	48	9	0	1	6	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	2	1	0	0	0	192	104	527	469	240	25	22	8	11	9	14	227	553	526	510	753
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAT............................................................................................................	23	1	4335.00	4335	0	0	173	111	3	0	0	0	0	0	0	2	12	0	0	0	0	0	0	0	0	0	0	4	44	40	61	48	23	21	4	18	91	0	87	62	116	104	12	1	8	12	8	8	11	14	3	6	8	3	8	2	1	1	3	0	0	2	1	8	0	0	0	28	58	168	136	156	446	444	233	308	310	312	161	95	76	125	135
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGT....................................................................................................................................................................	24	1	3802.00	3802	15	0	17	8	5	1	6	4	38	2	27	6	14	29	0	0	0	0	0	0	6	0	0	9	25	34	121	103	11	10	7	17	42	0	30	47	79	51	12	2	3	6	4	14	3	8	6	0	7	4	5	9	3	3	3	0	0	1	6	10	0	0	0	19	23	451	382	339	144	155	134	115	84	140	288	85	78	211	281
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAAA..................................................................................................................................................................	26	1	3794.00	3794	0	0	39	2	3	0	2	0	2	0	9	6	33	8	0	0	0	0	0	0	0	0	0	3	46	41	236	58	1	0	2	1	91	0	85	110	341	84	23	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	7	0	0	0	66	32	631	565	306	8	11	6	3	14	6	205	76	86	238	305
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATAAA...................................................................................................................................................................	25	1	3032.00	3032	0	0	46	1	2	0	1	0	1	0	1	2	20	6	0	0	0	0	0	0	0	0	0	6	66	17	165	32	1	2	1	3	74	0	53	60	404	56	24	0	1	2	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	52	15	470	466	214	10	3	1	1	2	1	178	67	106	177	215
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCC................................................................................................................	19	2	2906.50	5813	62	1	296	120	17	3	7	2	3	0	2	0	9	1	0	0	0	0	0	1	15	0	0	53	75	34	49	21	30	30	16	25	66	9	74	58	156	47	51	5	21	46	35	21	20	18	14	15	26	7	12	7	6	2	6	0	0	5	11	7	1	0	1	15	69	242	117	183	615	611	428	465	474	411	170	28	46	171	149
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAG............................................................................................................	23	1	2692.00	2692	3	0	71	39	2	0	0	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	5	21	25	42	21	28	18	8	36	68	1	47	39	103	52	3	2	1	14	5	2	1	1	1	0	2	2	2	2	0	1	0	1	0	0	0	6	0	0	0	10	13	181	163	157	173	150	87	90	119	127	172	92	112	150	212
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAA...................................................................................................................................................................	25	1	2569.00	2569	2	0	12	3	1	0	0	0	1	0	0	1	6	5	0	0	0	0	0	0	0	0	0	1	21	21	90	43	3	1	0	2	72	0	57	83	216	85	7	0	0	1	0	1	0	0	1	0	2	0	0	0	0	1	0	0	0	0	1	2	0	0	0	23	12	435	411	229	18	20	8	13	5	18	181	64	77	133	180
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAC............................................................................................................	23	1	2489.00	2489	0	0	26	43	1	1	1	0	0	0	1	0	6	0	0	0	0	0	0	0	7	0	1	3	11	8	8	13	3	2	0	9	13	0	11	13	18	13	2	0	3	12	10	6	4	8	5	3	5	2	1	0	1	1	1	0	0	2	1	3	0	0	0	2	5	137	126	191	189	179	86	129	121	144	166	171	182	173	206
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATAA....................................................................................................................................................................	24	1	2017.00	2017	1	0	16	0	2	0	0	1	0	0	0	4	5	6	0	0	0	0	0	0	0	0	0	6	41	26	115	45	4	6	1	11	73	1	63	61	348	95	10	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	21	18	247	242	144	0	5	4	1	0	3	105	46	35	88	113
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAC.............................................................................................................	22	2	1958.50	3917	8	0	49	2354	19	2	11	0	0	0	3	0	2	0	0	1	0	0	0	0	16	0	0	33	13	12	18	8	5	7	2	6	24	6	18	12	31	14	30	4	4	12	2	2	1	2	4	2	3	2	1	0	1	0	0	0	0	0	3	10	0	0	0	8	9	128	94	134	156	140	48	65	83	111	89	15	21	28	31
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAC...........................................................................................................	24	1	1569.00	1569	2	0	13	25	1	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	1	4	3	2	2	10	3	7	7	7	1	4	5	9	6	3	0	9	7	22	3	2	5	6	0	2	1	1	2	0	3	0	0	0	1	1	3	0	0	0	5	6	151	128	133	29	31	26	27	30	34	112	152	154	158	206
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA.............................................................................................................	21	1	1405.00	1405	0	0	1116	54	1	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	6	1	11	5	3	1	0	3	13	0	6	10	10	8	2	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	8	5	6	2	21	18	24	10	21	19	3	2	3	4	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAC..........................................................................................................	25	1	1346.00	1346	0	0	6	7	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	0	0	0	0	5	0	1	6	15	1	2	0	0	3	3	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	114	125	136	4	15	2	5	2	8	102	131	141	237	263
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAT...........................................................................................................	24	1	1133.00	1133	0	0	24	34	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	11	9	8	9	11	12	6	21	25	0	15	17	48	27	0	0	0	4	11	9	3	5	3	0	4	2	5	1	0	0	0	0	0	0	0	0	0	0	0	4	8	47	63	48	106	62	28	55	32	74	53	68	52	48	59
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAG...........................................................................................................	24	1	1131.00	1131	0	0	23	12	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	0	0	0	3	4	8	5	2	1	0	2	11	0	16	13	25	12	4	0	1	3	5	1	3	2	0	3	1	0	4	1	0	0	0	0	0	1	0	1	0	0	0	4	7	84	80	74	73	41	29	39	47	66	69	72	61	92	121
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAC.........................................................................................................	26	1	865.00	865	0	0	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	1	0	1	2	6	1	1	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	77	69	59	2	2	0	0	0	1	51	91	115	185	179
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAA............................................................................................................	22	1	811.00	811	0	0	620	55	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	5	8	1	3	3	0	1	9	0	10	6	23	12	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	3	2	5	8	2	4	4	3	1	2	3	2	4
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATT.....................................................................................................................................................................	23	1	735.00	735	6	0	4	2	2	0	1	0	0	0	1	3	2	2	0	0	0	0	0	0	1	0	0	4	1	2	3	3	1	3	1	7	5	1	3	2	4	2	2	0	2	9	9	3	4	8	4	5	13	6	8	3	5	2	3	0	0	2	14	14	0	0	0	0	4	75	89	102	8	14	17	9	16	8	68	21	18	46	58
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCA...............................................................................................................	20	2	635.00	1270	0	0	230	17	2	0	3	0	3	0	1	1	19	3	0	0	0	0	0	0	2	0	0	10	25	8	28	9	2	3	3	1	14	1	23	16	146	32	76	1	0	2	0	0	0	2	0	0	1	0	2	0	0	0	0	0	0	0	0	6	1	0	0	0	8	163	147	83	1	2	3	1	0	3	77	13	11	31	34
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGC.................................................................................................................	18	2	627.50	1255	14	0	18	2	8	0	3	0	3	0	5	0	5	0	0	0	0	0	0	0	2	0	0	12	47	24	30	34	11	7	5	10	52	3	69	55	101	44	14	0	1	4	3	2	3	1	2	1	0	0	0	0	0	0	0	2	0	1	1	1	0	0	1	40	89	36	10	27	54	56	48	59	54	29	34	4	9	56	49
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAA.........................................................................................................................................................................	19	1	607.00	607	10	0	4	0	1	2	1	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	3	7	0	9	1	16	10	5	14	2	0	5	0	2	2	0	0	1	7	1	3	0	0	2	3	0	1	2	0	1	0	0	0	0	0	3	0	0	0	0	0	1	19	25	18	106	91	39	58	52	38	20	3	1	7	7
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTT..............................................................................................................	21	2	557.50	1115	16	0	223	93	7	0	1	0	2	0	0	2	2	1	0	0	0	0	0	0	5	0	0	6	16	14	15	13	36	27	16	39	15	2	20	15	41	7	5	5	2	5	9	8	4	4	4	3	10	2	5	2	0	2	1	0	0	3	5	5	0	0	0	1	3	27	19	12	45	49	54	39	59	49	4	6	4	19	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAAT........................................................................................................................................................................	20	1	509.00	509	10	1	7	2	3	1	1	0	1	2	0	0	4	0	0	1	0	0	0	0	7	0	0	3	4	8	11	6	16	23	11	21	7	2	7	3	15	11	2	4	1	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	4	3	77	75	30	6	2	0	1	0	2	25	17	13	29	26
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACA..........................................................................................................................................................................	18	1	447.00	447	10	0	3	0	3	0	2	1	1	1	2	0	1	3	0	0	0	0	0	0	3	0	0	3	1	2	7	3	5	5	4	6	2	1	4	3	4	8	4	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	44	40	42	13	41	17	9	18	19	44	3	7	27	22
.....................................................................................................................................................................................................................................................................................................................ACGGTATTTGTGACAATATG.....................................................................................................................................................................	20	1	394.00	394	2	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	9	71	67	34	52	40	82	7	0	0	5	6
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTA..............................................................................................................	20	2	393.50	787	1	0	641	27	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	1	2	2	2	0	0	0	2	5	0	9	8	5	6	1	0	0	0	0	0	0	0	0	2	1	0	2	0	1	0	0	0	0	0	0	2	0	0	0	0	2	0	3	2	3	8	12	7	6	8	1	1	3	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAC........................................................................................................	27	1	378.00	378	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	1	1	1	0	1	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	26	20	0	0	0	0	0	0	22	49	50	64	93
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTG..............................................................................................................	21	2	373.50	747	10	0	18	9	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	11	3	7	3	1	4	1	1	24	1	16	21	45	27	6	1	4	8	2	3	2	4	1	3	5	0	3	0	0	0	0	0	0	0	1	7	0	0	0	1	3	95	95	41	36	24	27	7	12	32	71	5	5	17	21
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG.............................................................................................................	22	2	362.00	724	7	0	60	27	2	0	2	0	0	0	0	0	5	1	0	0	0	0	0	0	4	0	0	3	13	5	12	7	4	15	8	11	10	0	5	8	17	10	7	1	2	1	1	1	0	2	1	0	2	0	1	1	0	1	0	0	0	1	4	2	0	0	0	7	9	40	33	30	34	40	19	8	18	27	20	37	38	47	53
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAT..........................................................................................................	25	1	353.00	353	0	0	6	11	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	6	1	4	0	0	1	0	4	8	0	11	12	27	3	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	1	4	32	24	21	3	2	2	6	6	15	38	25	18	17	34
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTC..............................................................................................................	21	2	344.50	689	12	1	150	10	33	7	7	1	0	0	2	0	12	0	0	0	0	0	0	0	42	0	0	52	5	3	4	1	22	12	11	19	3	26	3	1	5	0	63	20	0	6	9	3	1	4	1	3	3	1	2	0	0	1	0	0	0	2	0	11	0	6	0	0	0	4	5	3	11	14	20	13	17	11	6	3	1	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTAA..................................................................................................................................................................	26	1	304.00	304	0	0	5	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	7	4	24	7	0	1	0	1	14	0	16	18	38	16	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	32	27	18	0	1	0	0	0	0	26	3	5	15	18
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATC.....................................................................................................................................................................	23	1	304.00	304	19	0	4	3	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	2	3	3	3	4	5	2	2	0	0	0	0	1	0	0	3	13	8	4	6	5	6	1	7	2	3	13	6	3	5	0	0	2	14	0	0	0	0	2	2	10	1	10	17	17	17	16	22	18	7	5	0	1	4
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCT...............................................................................................................	19	2	295.00	590	0	0	526	9	1	0	0	0	1	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	4	0	1	4	10	3	4	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	2	0	1	0	0	1	0	0	3	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAA...........................................................................................................	23	1	294.00	294	0	0	215	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	3	0	0	0	0	0	4	0	3	5	9	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	3	1	2	1	3	1	0	2	1	3	3	6	5
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCC...............................................................................................................	20	2	286.50	573	13	0	22	286	5	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	1	0	0	2	1	0	1	0	2	2	0	2	4	1	0	0	5	0	6	0	0	3	0	1	1	0	1	0	2	0	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	41	21	68	9	7	1	2	0	11	21	3	2	5	10
.................................................................................................................................................................................................................................................................................................................AAGGACGGTATTTGTGACAATAT......................................................................................................................................................................	23	1	252.00	252	0	0	2	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	1	0	1	3	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	28	14	30	17	17	10	14	12	15	22	4	5	17	26
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGC....................................................................................................................................................................	24	1	244.00	244	4	0	1	5	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	4	5	4	3	3	3	0	0	3	2	1	2	1	0	0	6	0	1	0	0	0	2	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	6	18	10	21	24	12	10	12	11	27	9	3	4	3	17
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTA...................................................................................................................................................................	25	1	239.00	239	0	2	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	7	0	0	0	1	4	0	7	3	7	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	38	33	26	4	8	0	0	9	3	28	10	8	16	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAA......................................................................................................................................................................	22	1	231.00	231	1	0	5	0	0	1	1	1	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	1	4	1	4	2	25	23	15	35	5	1	3	2	8	10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	14	11	10	3	4	1	1	0	0	12	4	5	5	6
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTGA..................................................................................................................................................................	26	1	222.00	222	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	3	10	12	0	1	0	0	5	0	7	5	3	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	28	24	32	3	3	3	0	1	3	21	7	4	20	15
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATATG.....................................................................................................................................................................	22	1	221.00	221	0	0	147	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	5	1	0	0	2	2	0	2	1	5	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	3	4	5	3	1	6	1	4	2	7	7
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAAA.....................................................................................................................................................................	23	1	216.00	216	5	0	1	1	1	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	1	0	7	4	7	4	4	3	2	0	5	2	13	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	4	0	36	31	10	3	1	1	2	0	1	11	6	8	16	18
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAT.........................................................................................................	26	1	201.00	201	0	0	4	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	0	0	0	1	0	0	1	9	17	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	20	24	16	3	2	1	0	1	3	10	18	17	18	18
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAA..........................................................................................................	24	1	189.00	189	0	0	153	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	0	0	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	1	3	0	1	0	0	0	1	3	2	2	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAACA.........................................................................................................	26	1	188.00	188	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	17	89	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	8	3	6	0	1	0	0	0	2	10	6	3	11	7
................................................................................................................................................................................................................................................................................................................TAAGGACGGTATTTGTGACAATAT......................................................................................................................................................................	24	1	185.00	185	1	0	1	0	0	0	0	0	4	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2	0	0	0	0	0	0	1	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	8	39	7	2	3	7	4	6	36	9	5	12	15
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAA.............................................................................................................	20	1	177.00	177	0	0	74	17	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	4	1	7	4	1	0	0	1	9	0	5	10	9	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	2	5	4	2	2	0	1	0	0	1	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAG..........................................................................................................	25	2	159.00	318	0	0	8	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	1	1	0	0	0	5	0	4	4	10	2	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	28	22	21	26	10	7	8	8	9	23	20	22	29	36
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAAC.......................................................................................................	28	1	151.00	151	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	14	17	1	0	0	0	0	0	7	10	14	28	34
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAAA............................................................................................................	21	1	145.00	145	0	0	51	15	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	6	3	2	2	1	0	1	0	7	0	12	8	7	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	2	0	0	3	1	1	0	2	1	0	0	2
.................................................................................................................................................................................................................................................................................................................AAGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	24	1	143.00	143	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	2	1	0	0	0	1	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	5	9	24	19	4	6	12	3	13	13	2	2	9	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATC...........................................................................................................	24	1	135.00	135	4	0	11	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	5	9	2	9	0	1	0	0	0	0	0	0	0	4	3	4	1	1	1	1	2	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	2	0	0	13	10	7	5	6	20	1	0	3	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATT...........................................................................................................	24	1	128.00	128	0	0	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	7	17	21	10	13	7	17	7	1	1	1	3
....................................................................................................................................................................................................................................................................................................................GACGGTATTTGTGACAATATG.....................................................................................................................................................................	21	1	106.00	106	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	7	9	7	9	6	3	8	6	5	1	4	6	14
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAACA........................................................................................................	27	1	104.00	104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	13	29	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	4	3	0	1	0	0	0	0	4	4	8	6	13
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGG....................................................................................................................................................................	24	1	102.00	102	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	14	15	22	0	0	0	1	1	2	10	3	9	11	9
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATCC....................................................................................................................................................................	24	1	102.00	102	28	0	8	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	5	5	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	3	8	3	11	8	2	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAG.........................................................................................................	26	1	93.00	93	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	4	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	8	5	2	2	3	4	0	2	5	5	7	9	19
......................................................................................................................................................................................................................................................................................................................CGGTATTTGTGACAATATG.....................................................................................................................................................................	19	1	92.00	92	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	22	11	7	18	7	17	0	0	2	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGG..................................................................................................................	17	2	85.00	170	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	15	11	14	0	0	0	0	0	0	18	3	10	29	67
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTGT..................................................................................................................................................................	26	1	84.00	84	0	0	0	0	0	0	0	0	3	0	0	2	1	3	0	0	0	0	0	0	0	0	0	0	0	1	7	4	0	1	0	0	4	0	3	1	2	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	4	5	3	1	2	2	6	5	2	2	0	8
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAAA.........................................................................................................	25	1	83.00	83	0	0	71	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	5
...............................................................................................................................................................................................................................................................................................................................................................................GCACATCTCCCGGCCTAA.............................................................................................................	18	1	82.00	82	0	0	26	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	3	1	1	0	0	1	0	1	0	0	3	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	15	0	0	0	1	2	1	0	5	1	3	0	1	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCG...............................................................................................................	20	2	81.50	163	10	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	9	6	8	1	3	7	0	6	3	0	2	0	2	4	0	0	1	4	1	0	1	0	0	0	2	5	5	9	8	10	5	14	13	6	0	0	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAT........................................................................................................	27	1	81.00	81	0	0	6	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	0	1	0	6	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	13	8	1	0	0	0	0	0	1	4	6	11	2	10
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGTC...................................................................................................................................................................	25	1	80.00	80	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	15	9	7	15	8	18	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGAC...........................................................................................................................................................................	17	1	76.00	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	11	19	0	0	0	0	0	0	18	1	1	8	9

droMoj3

CTTTGCTA-TCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCCAAGTAAGTTTCAAAAGAAAAAACGAAAAATGTCAAATTTTCAGCT---------------------------------------------------GCGTTTGCAGGACGGTATTTGTGACAATATGAATTA----T--TGAAATCAATTTAT--TCAGCATATTGCACATCTCCCGGCCTATAAAACAGT-TGTGAGCCCGTCGATTTAAATGAT------------------TTGTGTATTTAAA--------------ATAAATTTTCACCATAAATATCGTTTAAATG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAT.............................................................................................................	22	1	98033.00	98033	42391	2531	10	16	53028	57
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTA..............................................................................................................	21	2	17548.50	35097	12031	2076	21	17	20844	108
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATA............................................................................................................	23	1	10954.00	10954	2507	271	0	0	8173	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCT...............................................................................................................	20	2	8204.50	16409	7412	938	28	44	7799	188
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAA...........................................................................................................	24	1	4601.00	4601	1728	87	1	1	2783	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAA..........................................................................................................	25	1	3822.00	3822	3212	75	0	3	513	19
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAT.............................................................................................................	21	1	2956.00	2956	2276	2	0	0	678	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATT............................................................................................................	23	1	2262.00	2262	755	17	0	1	1488	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA.............................................................................................................	22	2	1986.00	3972	1546	77	1	1	2345	2
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATG.....................................................................................................................................................................	23	1	1845.00	1845	1029	153	0	2	642	19
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAA.........................................................................................................	26	1	1390.00	1390	1309	14	0	0	61	6
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAT......................................................................................................................................................................	22	1	1011.00	1011	271	76	1	0	662	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCC...............................................................................................................	20	2	903.50	1807	3	1	0	0	1803	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAAA........................................................................................................	27	1	662.00	662	654	0	0	0	6	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCC................................................................................................................	19	2	434.50	869	165	12	0	1	689	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATC............................................................................................................	23	1	417.00	417	207	2	0	0	203	5
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTA..............................................................................................................	20	2	389.50	779	602	5	0	0	168	4
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTAT.............................................................................................................	20	1	288.00	288	139	0	0	0	149	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATA............................................................................................................	22	1	249.00	249	127	0	0	0	122	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCT...............................................................................................................	19	2	233.50	467	379	0	1	0	87	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAA..........................................................................................................	24	1	205.00	205	196	1	0	0	8	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATG............................................................................................................	23	1	167.00	167	85	5	0	0	77	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAA...........................................................................................................	23	1	157.00	157	107	1	0	0	49	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTT..............................................................................................................	21	2	144.50	289	147	10	0	1	126	5
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATATG.....................................................................................................................................................................	22	1	116.00	116	115	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTC..............................................................................................................	21	2	102.50	205	149	13	0	1	36	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAT...........................................................................................................	24	1	89.00	89	25	0	0	0	64	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATA.....................................................................................................................................................................	23	1	86.00	86	23	5	0	0	58	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATT............................................................................................................	22	1	82.00	82	54	0	0	0	28	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCA...............................................................................................................	20	2	81.00	162	117	3	0	1	41	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCTAT.............................................................................................................	23	1	80.00	80	76	0	0	0	4	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATA.......................................................................................................................................................................	21	1	79.00	79	24	2	0	0	52	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAA.........................................................................................................	25	1	71.00	71	67	0	0	0	4	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACATCTCCCGGCCTAT.............................................................................................................	19	1	54.00	54	30	2	0	0	22	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG.............................................................................................................	22	2	53.00	106	64	4	0	0	35	3
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA.............................................................................................................	21	2	52.50	105	76	0	0	0	29	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTT...........................................................................................................	24	1	46.00	46	9	0	0	0	36	1
...............................................................................................................................................................................................................................................................................................................................................................................GCACATCTCCCGGCCTAT.............................................................................................................	18	1	44.00	44	29	0	0	0	15	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCC...........................................................................................................	24	1	43.00	43	42	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCT...............................................................................................................	21	2	42.00	84	22	5	0	1	56	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGA....................................................................................................................................................................	24	1	39.00	39	16	5	0	0	18	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAC...........................................................................................................	24	1	39.00	39	12	2	0	0	25	0
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGACAATAT......................................................................................................................................................................	21	1	38.00	38	37	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAC......................................................................................................................................................................	22	1	30.00	30	0	0	0	0	30	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAG...........................................................................................................	24	1	30.00	30	19	2	0	0	8	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTC...........................................................................................................	24	1	30.00	30	18	0	0	0	11	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGC.................................................................................................................	18	2	28.50	57	40	4	0	0	13	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGC....................................................................................................................................................................	24	1	28.00	28	7	3	0	0	18	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTA..............................................................................................................	19	2	27.50	55	34	0	0	0	21	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAAA........................................................................................................	26	1	27.00	27	27	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAAA..................................................................................................................................................................	26	1	27.00	27	24	3	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATA............................................................................................................	21	1	27.00	27	11	0	0	0	16	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCT...............................................................................................................	18	2	23.50	47	24	0	0	0	23	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAAT........................................................................................................................................................................	20	1	23.00	23	11	1	0	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTG..............................................................................................................	21	2	22.00	44	9	2	0	0	33	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATAA...........................................................................................................	22	1	20.00	20	7	0	0	0	13	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAT..........................................................................................................	25	1	20.00	20	10	0	0	0	10	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGT....................................................................................................................................................................	24	1	20.00	20	7	2	0	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAT.........................................................................................................	26	1	18.00	18	11	0	0	0	7	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCC...............................................................................................................	19	2	15.50	31	0	0	0	0	31	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAAA.....................................................................................................................................................................	23	1	15.00	15	12	1	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAC..........................................................................................................	25	1	15.00	15	4	0	0	0	11	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGAA...................................................................................................................................................................	25	1	13.00	13	4	6	0	0	3	0
....................................................................................................................................................................................................................................................................................................................GACGGTATTTGTGACAATATG.....................................................................................................................................................................	21	1	13.00	13	11	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACATCTCCCGGCCTATC............................................................................................................	22	1	13.00	13	12	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACATCTCCCGGCCTATAAA..........................................................................................................	23	1	12.00	12	12	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATATGCC...................................................................................................................................................................	25	1	12.00	12	3	0	0	0	9	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGACAATAA......................................................................................................................................................................	22	1	11.00	11	8	1	0	0	1	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACATCTCCCGGCCTA..............................................................................................................	22	2	10.50	21	12	0	0	0	9	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCCC..........................................................................................................	25	1	10.00	10	10	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACATCTCCCGGCCTATA............................................................................................................	20	1	10.00	10	3	0	0	0	7	0

droWil2

AAAAAGTG-TAAT----TT-AT----------------------------------------------------------------AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------TTATTCT----AA----TA-A-C-------------TCCCCATATTGCACCTTTTCCGGCCTCTAAATTAACTTTTGAACATCCCGG----------------G--------------TGGGGAAAAAGAAG-GAGTCAATGA--------------------CCACAAATTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCT.............................................................................................................	22	1	4721.00	4721	17	2089	17	2585	13
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTC..............................................................................................................	21	1	1125.00	1125	13	381	11	716	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCT...............................................................................................................	20	1	1036.00	1036	13	357	11	649	6
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTA............................................................................................................	23	1	140.00	140	1	85	0	53	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCT.............................................................................................................	21	1	131.00	131	0	126	0	5	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTC..............................................................................................................	20	1	37.00	37	0	35	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCT...............................................................................................................	19	1	33.00	33	0	32	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCA.............................................................................................................	22	1	30.00	30	0	15	0	15	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTT............................................................................................................	23	1	26.00	26	0	14	1	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAA...........................................................................................................	24	1	22.00	22	0	20	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAA..........................................................................................................	25	1	20.00	20	1	13	0	6	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTA..............................................................................................................	21	1	17.00	17	0	6	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCC................................................................................................................	19	1	16.00	16	3	5	0	8	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATG......................................................................................................................................................................................	24	1	16.00	16	3	7	0	5	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTC..............................................................................................................	22	1	14.00	14	0	3	0	11	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCT...............................................................................................................	21	1	10.00	10	0	2	0	8	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTT..............................................................................................................	21	1	8.00	8	0	3	0	5	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCT.............................................................................................................	20	1	8.00	8	0	7	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTA............................................................................................................	22	1	7.00	7	0	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCC.............................................................................................................	22	1	7.00	7	0	3	0	4	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAAA.........................................................................................................	26	1	6.00	6	0	5	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCG.............................................................................................................	22	1	5.00	5	0	2	3	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTG............................................................................................................	23	1	4.00	4	1	2	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACCTTTTCCGGCCTCT.............................................................................................................	18	1	4.00	4	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTC............................................................................................................	23	1	4.00	4	0	1	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCAA...............................................................................................................	20	1	3.00	3	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCC...............................................................................................................	20	1	3.00	3	0	1	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCA...............................................................................................................	20	1	3.00	3	0	3	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAA........................................................................................................................................................................................	22	1	3.00	3	0	1	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAAAAA........................................................................................................	27	1	2.00	2	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAAAAA........................................................................................................	26	1	2.00	2	0	2	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAAT.......................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCT...............................................................................................................	18	1	2.00	2	0	1	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACCTTTTCCGGCCTCT.............................................................................................................	19	1	2.00	2	0	2	0	0	0
.......................................................................................GGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATG......................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTCT.............................................................................................................	23	1	2.00	2	0	1	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAA...........................................................................................................	23	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACCTTTTCCGGCCTA..............................................................................................................	22	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCTT............................................................................................................	21	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCG................................................................................................................	19	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTAA.............................................................................................................	22	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCA...............................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGC.................................................................................................................	18	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAT...........................................................................................................	24	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCC.............................................................................................................	21	1	1.00	1	0	1	0	0	0
......................................................................................AGGCTTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAA..........................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCA.............................................................................................................	21	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTAAA..........................................................................................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTTT...........................................................................................................	24	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCT................................................................................................................	19	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTCTA............................................................................................................	21	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACCTTTTCCGGCCTC..............................................................................................................	18	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACCTTTTCCGGCCTCTG............................................................................................................	22	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACCTTTTCCGGCCTC..............................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCGT............................................................................................................	23	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTTG...........................................................................................................	24	1	1.00	1	0	0	0	1	0
..........................................................................................TTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------.............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................................................................GGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATGGT-------.............................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCTCTAG...........................................................................................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACCTTTTCCGGCCAAA.............................................................................................................	22	2	0.50	1	0	1	0	0	0
..........................................................................................TTCGGGG-------------------TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAAATAAA-------.............................................................................................................................................................................	22	9	0.11	1	0	0	0	1	0

droAna3

GGAAGGTTGCA-----------------------------------------ATGCGT--ATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAAC-AGCAGCG--------------ATCGCTATCTGAGAGAAATATTTGT------TGCCAG----------------------------------------------------------------------------------------------------------------------------------ATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT----T----T-------------CAAACATATTGCACTTATACCGGCCTGATGATCTCC-GGCG--CTCGTCATCTG----------TGAC--------------T-----AAAAGTGC-GA--AAATAGCAAAA------CAT------A------AAC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGA.............................................................................................................	22	1	104879.00	104879	12507	89224	3069	29	31	19
.......................................................................TATTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	34173.00	34173	2456	30922	783	2	1	9
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAA............................................................................................................	23	1	13773.00	13773	1049	12489	232	1	0	2
.......................................................................TATTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	10436.00	10436	1083	8865	473	6	1	8
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAA...........................................................................................................	24	1	8865.00	8865	1007	7771	87	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	8113.00	8113	385	7553	172	0	0	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCC................................................................................................................	19	1	8002.00	8002	9	7984	9	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	6649.00	6649	11	6633	4	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTG..............................................................................................................	21	1	6004.00	6004	1265	4440	280	5	8	6
.......................................................................TATTGCACTTTCCCCGGCCCATA................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2401.00	2401	301	2016	81	1	0	2
.......................................................................TATTGCACTTTCCCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1665.00	1665	169	1422	66	7	0	1
.......................................................................TATTGCACTTTCCCCGGCCCATT................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1574.00	1574	147	1378	45	1	0	3
.......................................................................TATTGCACTTTCCCCGGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1369.00	1369	297	1045	26	0	0	1
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGA.............................................................................................................	21	1	1128.00	1128	785	338	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCT...............................................................................................................	20	1	775.00	775	152	585	37	0	0	1
........................................................................ATTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	633.00	633	153	478	2	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	608.00	608	133	432	43	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAT............................................................................................................	23	1	560.00	560	54	493	7	0	5	1
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATATG.....................................................................................................................................................................	23	1	527.00	527	176	260	52	2	31	6
.......................................................................TATTGCACTTTCCCCGGCCCATAA...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	499.00	499	61	428	10	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGC.............................................................................................................	22	1	365.00	365	14	312	39	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGT.............................................................................................................	22	1	355.00	355	51	270	30	2	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAC............................................................................................................	23	1	312.00	312	9	302	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATAT......................................................................................................................................................................	22	1	205.00	205	18	172	12	0	3	0
.......................................................................TATTGCACTTTCCCCGGCCCATC................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	174.00	174	3	171	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	168.00	168	50	117	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCC...............................................................................................................	20	1	159.00	159	1	157	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGAA............................................................................................................	22	1	147.00	147	64	81	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAG............................................................................................................	23	1	146.00	146	20	121	3	0	1	1
.......................................................................TATTGCACTTTCCCCGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	137.00	137	15	115	7	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTGAAA...........................................................................................................	23	1	122.00	122	65	57	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGA.............................................................................................................	20	1	117.00	117	36	81	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAT...........................................................................................................	24	1	114.00	114	6	108	0	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	103.00	103	11	91	1	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	102.00	102	1	101	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGG.............................................................................................................	22	1	98.00	98	32	59	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAC...........................................................................................................	24	1	92.00	92	8	79	5	0	0	0
........................................................................ATTGCACTTTCCCCGGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	89.00	89	21	67	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATTT...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	88.00	88	7	79	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCCTG..............................................................................................................	20	1	83.00	83	69	13	1	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCATA................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	69.00	69	29	37	3	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCT..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	68.00	68	7	58	3	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATG................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	62.00	62	5	56	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	49.00	49	7	42	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGCA............................................................................................................	23	1	47.00	47	1	34	12	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATTA...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	44.00	44	0	43	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCA...............................................................................................................	20	1	44.00	44	3	35	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGATA...........................................................................................................	24	1	43.00	43	3	37	1	2	0	0
.......................................................................TATTGCACTTTCCCCGGCCCATAT...............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	38.00	38	2	36	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTA..............................................................................................................	21	1	37.00	37	8	29	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACTTATACCGGCC................................................................................................................	18	1	37.00	37	0	37	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATATA.....................................................................................................................................................................	23	1	36.00	36	6	25	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGC.................................................................................................................	18	1	35.00	35	2	26	4	2	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGTATTTGTGTCAATA.......................................................................................................................................................................	21	1	35.00	35	4	23	5	0	1	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGACA...........................................................................................................	24	1	35.00	35	2	30	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTT..............................................................................................................	21	1	34.00	34	4	25	5	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	33.00	33	11	19	3	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGAAA...........................................................................................................	22	1	32.00	32	4	27	1	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCC..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	31.00	31	1	19	11	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGTATTTGTGTCAATATG.....................................................................................................................................................................	22	1	28.00	28	27	1	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	27.00	27	12	14	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACTTATACCGGCCTGAA............................................................................................................	21	1	26.00	26	5	20	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGTA............................................................................................................	23	1	25.00	25	4	10	11	0	0	0
........................................................................ATTGCACTTTCCCCGGCCCATT................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	23.00	23	6	17	0	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	22.00	22	0	22	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACTTATACCGGCCTGA.............................................................................................................	19	1	22.00	22	8	14	0	0	0	0
........................................................................ATTGCACTTTCCCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	22.00	22	7	15	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACTTATACCGGCCTGATT...........................................................................................................	24	1	21.00	21	9	12	0	0	0	0
.......................................................................TATTGCACTTTCCCCGGCCCAAT................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	21.00	21	1	20	0	0	0	0
.......................................................................TATTGCACTTTCCCCGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	21.00	21	3	14	4	0	0	0
.........................................................................TTGCACTTTCCCCGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	21.00	21	5	16	0	0	0	0
..........................................................................TGCACTTTCCCCGGCCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	18.00	18	2	16	0	0	0	0

droBip1

GCAAAGC-------------------------------------------------GT--ATTTTTAATCGTATTGCACTTTCCCCAGCCCATAGATATTATGCGAAT-AGCAGCG--------------TCCGGTATGTGAGTGAAATATTTGT------GGCCAG----------------------------------------------------------------------------------------------------------------------------------ATACCCTTTAGGTCGGTATTTGTGACAATATGA---T----AT-T-T-------------CAATCATATTGCACTTGTACCGGCCTGATAATATCT-GGCA--TTCGTCATCTG----------TGAG--------------TCTGTGAAAAGTGC-GCG-AAATAT--------------------CAAAACATAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----TT-A-A-------------TATTTGTATTGCACACTTCCCGGCCTATGAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTTTTTAT-TTGT----TTCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGG--ATTTTTAAGCATATTGCACATTTACCGGCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATGCACTGGCTATTCATCAATTATT-TATGCAAATGCACAAAAACATTTGCAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTT-C-------------TAACTATATTGCACACTTCCCGGCCTATAAATGCGT-ATTGTGCTCACC---T-AAAATATCTGTGAAATCAAAAA-----------------------------------------------------AATAATTA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGCGGGGTGGTGCGTCAATATATTTTG----TT-T-T-------------TATCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTGTAGGCGGGGTGGTGCGTCAATATATATATGTCGTT-T-T-------------TACCTATATTGCACACTTCCCGGCCTCTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GGTGGGTGGCA-----------------------------------------ATGCGATGCTTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAAC-----TCGAGCAAGAAGCGTAAAAATCGGTTTAAA-------------------TGGT------TCCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTT-TAGGTTTA------------------AAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAAGCGCCTGCAAATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGCAGGCTGGGTTGTGTGTTAATATATTGAT----T--T-T-------------AAGCTATATTGCACACTTCCCGGCCTATAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAATAGTTGTAGT----TT-TC----------------------------------------------------------------GGCTTATAAAG-------------------TTCCAGCAGAATAAATAAATAGTTGGGAGAGAACAGAGTTGAAATT-CCTAAATATTTTTAGGCCTGTGTCTGT-TCAATATAATTATTTAAA------------------AATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAAGTGAGTGCACGTACACA--AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droSim2

T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTATATTTAC----TT-C-T-------------TAGCTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTT.............................................................................................................	22	1	25506.00	25506	3	22	336	4507	2159	90	2658	2736	3533	3683	1506	1479	1186	1606	0	1	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTT..............................................................................................................	21	1	5419.00	5419	2	33	391	581	511	14	402	396	947	731	349	441	96	525	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	25	1	2995.00	2995	0	1	25	249	1	0	192	171	1446	865	27	8	8	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTA............................................................................................................	23	1	2479.00	2479	0	7	30	275	379	14	155	145	687	548	53	75	48	63	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCT...............................................................................................................	20	1	1872.00	1872	1	28	84	80	830	23	73	57	206	117	184	74	4	111	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA...........................................................................................................	24	1	1708.00	1708	0	2	62	313	47	2	92	83	488	472	36	48	46	17	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCC................................................................................................................	19	1	1693.00	1693	0	7	19	0	1422	49	8	9	19	20	137	1	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	26	1	1019.00	1019	0	0	4	66	0	0	104	84	500	256	4	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	21	1	606.00	606	0	0	0	0	0	0	94	152	35	21	0	0	67	237	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGC.................................................................................................................	18	1	432.00	432	0	1	6	0	262	11	10	4	15	27	96	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTT.............................................................................................................	21	1	337.00	337	0	0	0	258	31	0	5	2	9	9	2	8	3	10	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCG...................................................................................................................	16	1	241.00	241	0	0	0	0	0	0	1	0	1	4	235	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTAT......................................................................................................................................................................	22	1	226.00	226	0	0	2	7	70	4	0	0	0	0	135	7	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTA.............................................................................................................	22	1	216.00	216	0	1	3	23	0	0	8	10	86	50	10	15	4	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	210.00	210	0	0	1	24	0	0	29	20	81	55	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	20	1	193.00	193	0	0	8	3	15	1	27	46	8	9	66	4	1	5	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTT............................................................................................................	23	1	149.00	149	0	1	2	26	0	0	11	7	13	21	12	9	4	43	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTA.......................................................................................................................................................................	21	1	118.00	118	0	0	2	1	50	2	1	1	1	0	52	2	1	5	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	19	1	62.00	62	0	0	0	1	37	0	2	7	1	0	10	0	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGG..................................................................................................................	17	1	62.00	62	0	0	0	0	0	0	6	9	6	6	35	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATA.....................................................................................................................................................................	23	1	61.00	61	0	0	0	4	6	1	0	0	0	0	50	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCA..........................................................................................................................................................................	18	1	52.00	52	0	0	0	0	23	0	5	8	0	2	12	0	0	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTTT.............................................................................................................	18	1	46.00	46	0	0	0	0	0	0	0	0	0	0	45	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTT..............................................................................................................	20	1	44.00	44	0	0	0	29	8	1	0	0	1	1	1	1	0	2	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TTTAC----TT-C-T-------------TAGCTA...................................................................................................................................	15	1	41.00	41	0	0	0	0	0	0	15	12	1	13	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCC....................................................................................................................	15	1	35.00	35	0	0	0	0	0	0	0	0	0	0	35	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTC...........................................................................................................................................................................	17	1	33.00	33	0	0	0	0	0	0	6	7	0	0	20	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCC................................................................................................................	18	1	31.00	31	0	0	0	0	30	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGT............................................................................................................................................................................	16	1	30.00	30	0	0	0	0	0	0	1	1	0	0	28	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTT.............................................................................................................	23	1	24.00	24	0	0	0	2	0	0	0	0	0	0	2	0	11	9	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA...........................................................................................................	23	1	24.00	24	0	0	0	21	2	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAAA...................................................................................................................................................................	25	1	24.00	24	0	0	0	1	0	0	0	0	0	0	23	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTAA......................................................................................................................................................................	22	1	23.00	23	0	0	0	2	0	0	0	0	0	2	17	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTT.............................................................................................................	20	1	21.00	21	0	0	0	15	0	0	0	2	0	1	0	0	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTG............................................................................................................	23	1	20.00	20	0	0	4	11	0	0	0	0	0	2	2	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAA....................................................................................................................................................................	24	1	20.00	20	0	0	0	2	0	0	0	0	0	0	18	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCT...............................................................................................................	19	1	19.00	19	0	0	0	3	13	1	0	0	0	0	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTC............................................................................................................	23	1	18.00	18	0	0	0	1	0	0	2	3	6	2	0	1	0	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTA............................................................................................................	22	1	17.00	17	0	0	0	11	3	1	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT...........................................................................................................	24	1	16.00	16	0	0	0	2	0	0	0	1	4	3	0	3	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTC..............................................................................................................	21	1	16.00	16	1	1	11	0	0	0	0	1	0	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTC.............................................................................................................	22	1	14.00	14	0	2	2	1	0	0	0	1	1	2	3	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTT..............................................................................................................	17	1	13.00	13	0	0	0	0	0	0	0	0	0	2	11	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTA..............................................................................................................	21	1	13.00	13	0	0	0	1	0	0	1	0	5	1	1	2	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	24	1	13.00	13	0	0	0	11	0	0	0	0	1	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGTATA.....................................................................................................................................................................	18	1	12.00	12	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTG..............................................................................................................	21	1	11.00	11	0	0	4	4	0	0	1	0	0	0	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGA......................................................................................................................................................................	22	1	11.00	11	0	0	0	0	0	0	4	3	2	1	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCC...............................................................................................................	20	1	11.00	11	0	5	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTG.............................................................................................................	22	1	10.00	10	0	0	0	2	0	0	0	0	0	0	5	0	2	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTG.............................................................................................................................................................................	15	1	10.00	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTT.......................................................................................................................................................................	21	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTTT.............................................................................................................	19	1	9.00	9	0	0	0	3	2	0	0	0	0	0	3	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................ACACTTCCCGGCCTTT.............................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTT..............................................................................................................	22	1	7.00	7	0	0	0	1	0	0	0	0	0	0	0	0	0	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCG...............................................................................................................	20	1	7.00	7	0	1	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT...........................................................................................................	24	1	7.00	7	0	0	0	0	0	0	0	0	1	0	0	0	0	6	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG...........................................................................................................	24	1	7.00	7	0	0	3	1	0	0	0	0	2	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCA...............................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	0	3	0	2	0	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTA............................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTT............................................................................................................	22	1	5.00	5	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCT...............................................................................................................	16	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGTAT......................................................................................................................................................................	17	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCA................................................................................................................	19	1	5.00	5	0	0	0	0	0	0	1	1	1	1	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	25	1	4.00	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCA..........................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTTA............................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCC................................................................................................................	15	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................ACGGGTCGTGTGTCAGTAT......................................................................................................................................................................	19	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GGTCGTGTGTCAGTATA.....................................................................................................................................................................	17	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GCAGGACGGGTCGTGTGTCAG.........................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTATAAAA..................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGG........................................................................................................................................................................	20	1	3.00	3	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GCAGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAA...........................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA..........................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAACA.........................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTTAA...........................................................................................................	25	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................TGCAGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................CACACTTCCCGGCCTTT.............................................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TTTAC----TT-C-T-------------TAGCTAA..................................................................................................................................	16	3	2.00	6	0	0	0	0	0	0	2	1	1	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................GGGTCGTGTGTCAGT........................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................CTTCCCGGCCTTTAAA..........................................................................................................	16	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................CGGGTCGTGTGTCAGTAT......................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT.........................................................................................................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GGTCGTGTGTCAGTA.......................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTG.............................................................................................................	21	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

T---------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------AACATTTGCAGGACGGGTCGTGTGTCAGTGTATTTAC----TT-C-T-------------TAACTATATTGCACACTTCCCGGCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTT.............................................................................................................	22	1	12571.00	12571	12156	10	349	56
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTT..............................................................................................................	21	1	2018.00	2018	1803	5	186	24
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTT.............................................................................................................	21	1	731.00	731	731	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTA............................................................................................................	23	1	446.00	446	421	2	20	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCT...............................................................................................................	20	1	194.00	194	119	7	65	3
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA...........................................................................................................	24	1	154.00	154	126	0	26	2
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTT..............................................................................................................	20	1	82.00	82	81	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTT............................................................................................................	23	1	80.00	80	74	2	4	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	25	1	77.00	77	70	0	7	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTA.....................................................................................................................................................................	23	1	71.00	71	60	5	2	4
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTT.............................................................................................................	20	1	48.00	48	46	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTA.............................................................................................................	22	1	43.00	43	31	0	7	5
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTA............................................................................................................	22	1	24.00	24	24	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTG............................................................................................................	23	1	21.00	21	21	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA.........................................................................................................	26	1	15.00	15	14	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTG..............................................................................................................	21	1	15.00	15	14	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGT......................................................................................................................................................................	22	1	15.00	15	12	1	1	1
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTTT.............................................................................................................	23	1	13.00	13	13	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCC................................................................................................................	19	1	8.00	8	6	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCT...............................................................................................................	19	1	8.00	8	8	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTG.......................................................................................................................................................................	21	1	7.00	7	6	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTC.............................................................................................................	22	1	7.00	7	6	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTC............................................................................................................	23	1	7.00	7	7	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	6.00	6	4	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTT............................................................................................................	22	1	6.00	6	6	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGGCCTTT.............................................................................................................	18	1	6.00	6	6	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA...........................................................................................................	23	1	5.00	5	4	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTTT.............................................................................................................	19	1	5.00	5	5	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA..........................................................................................................	24	1	4.00	4	4	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAGTGTA.....................................................................................................................................................................	22	1	4.00	4	4	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTA.............................................................................................................	21	1	4.00	4	4	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAGTGT......................................................................................................................................................................	21	1	3.00	3	3	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTT..............................................................................................................	19	1	3.00	3	2	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGT........................................................................................................................................................................	20	1	3.00	3	3	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGGCCTT..............................................................................................................	22	1	3.00	3	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTA..............................................................................................................	21	1	3.00	3	0	0	3	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTG.............................................................................................................	21	1	3.00	3	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTC.............................................................................................................	21	1	3.00	3	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGC.................................................................................................................	18	1	2.00	2	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG...........................................................................................................	24	1	2.00	2	1	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGGCCTT..............................................................................................................	18	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTAAAA..................................................................................................................................................................	26	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTCTG..........................................................................................................	25	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTGGC..........................................................................................................	25	1	1.00	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGGCCTTTC............................................................................................................	22	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTA............................................................................................................	21	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAGTGTT.....................................................................................................................................................................	23	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT...........................................................................................................	24	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA..........................................................................................................	23	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC...........................................................................................................	24	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCC...............................................................................................................	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCTTAT............................................................................................................	23	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGGCCA...............................................................................................................	20	1	1.00	1	0	0	1	0

droYak3

ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAAGTGCTTGCAAATACACA--AACATTTGCAGGACGGGTCGTGTGGCAGTGTATTGAT----TT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATGTCC-AGTGT-TTCGAC---T-TGGATATCTGTGAAATCATAAA------------------------------------------------------------A	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTT.............................................................................................................	22	1	30388.00	30388	0	19757	10171	446	3	9	2	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	22	1	29661.00	29661	307	9351	14039	5878	14	11	42	0	1	0	18
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	23	1	3321.00	3321	21	745	2354	199	0	0	1	1	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	21	1	2270.00	2270	93	952	665	545	1	1	13	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTT.............................................................................................................	21	1	2170.00	2170	0	2019	151	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	24	1	1775.00	1775	9	697	1008	56	1	0	4	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTT..............................................................................................................	21	1	1594.00	1594	0	907	611	74	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCC....................................................................................................................................................................................................................................................	19	1	1175.00	1175	38	7	1127	2	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTC.............................................................................................................	22	1	1155.00	1155	0	6	1149	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	21	1	670.00	670	0	591	62	17	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	23	1	549.00	549	32	242	249	21	0	1	3	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTA............................................................................................................	23	1	522.00	522	0	387	125	10	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA...........................................................................................................	24	1	337.00	337	0	262	68	7	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTT............................................................................................................	23	1	256.00	256	1	180	70	5	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	25	1	189.00	189	0	114	67	7	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTT.............................................................................................................	20	1	174.00	174	0	134	40	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGT.................................................................................................................................................................................................................................................	22	1	162.00	162	28	43	42	25	0	2	22	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	25	1	155.00	155	0	144	10	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	23	1	134.00	134	4	21	107	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	20	1	133.00	133	1	56	31	16	0	0	3	6	0	20	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	22	1	123.00	123	64	30	11	18	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTC..............................................................................................................	21	1	107.00	107	0	0	107	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTT..............................................................................................................	20	1	106.00	106	0	93	13	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCT...............................................................................................................	20	1	99.00	99	0	52	45	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGC.................................................................................................................................................................................................................................................	22	1	95.00	95	3	3	51	38	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGTA.....................................................................................................................................................................	23	1	86.00	86	0	84	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT...............................................................................................................................................................................................................................................	24	1	79.00	79	3	20	46	10	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	22	1	78.00	78	0	48	29	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	23	1	66.00	66	0	53	13	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	20	1	62.00	62	0	58	4	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTG.............................................................................................................	22	1	52.00	52	0	52	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGCCCTTT.............................................................................................................	23	1	49.00	49	0	47	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTA.............................................................................................................	22	1	45.00	45	0	31	13	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTG............................................................................................................	23	1	41.00	41	0	38	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGCCCTTT.............................................................................................................	19	1	40.00	40	0	29	11	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	20	1	37.00	37	0	28	9	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................GCACACTTCCCGCCCTTT.............................................................................................................	18	1	37.00	37	0	30	7	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTA............................................................................................................	22	1	34.00	34	0	33	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA...........................................................................................................	23	1	31.00	31	0	28	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	26	1	29.00	29	0	25	4	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	22	1	27.00	27	1	15	11	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT...........................................................................................................	24	1	26.00	26	0	24	1	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	26	1	26.00	26	0	25	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT...............................................................................................................................................................................................................................................	24	1	25.00	25	6	7	7	5	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTT............................................................................................................	22	1	25.00	25	0	22	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTC............................................................................................................	23	1	24.00	24	0	14	10	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC...............................................................................................................................................................................................................................................	24	1	23.00	23	0	4	18	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................CATTCACCGGCCTGA.................................................................................................................................................................................................................................................	15	1	22.00	22	0	0	0	0	0	0	0	0	0	0	22
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGT......................................................................................................................................................................	22	1	20.00	20	0	14	5	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG................................................................................................................................................................................................................................................	23	1	20.00	20	1	9	8	2	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCC................................................................................................................	19	1	19.00	19	0	10	8	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	18	1	19.00	19	1	10	4	4	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG...............................................................................................................................................................................................................................................	24	1	19.00	19	1	7	8	3	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTG.......................................................................................................................................................................	21	1	15.00	15	0	9	3	1	0	0	2	0	0	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	23	1	15.00	15	0	12	2	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA........................................................................................................	27	1	15.00	15	0	15	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGGCAGTGTA.....................................................................................................................................................................	22	1	12.00	12	0	12	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCC...............................................................................................................	20	1	12.00	12	1	0	11	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	24	1	12.00	12	0	12	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT................................................................................................................................................................................................................................................	23	1	11.00	11	9	2	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCC...................................................................................................................................................................................................................................................	20	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTTT...........................................................................................................	24	1	10.00	10	0	9	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTT..............................................................................................................	19	1	10.00	10	0	9	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.......................................................................................................	28	1	9.00	9	0	8	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG...........................................................................................................	24	1	9.00	9	0	9	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	19	1	9.00	9	0	7	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC...........................................................................................................	24	1	9.00	9	0	7	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTC.............................................................................................................	21	1	9.00	9	0	1	8	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGACT...............................................................................................................................................................................................................................................	24	1	8.00	8	2	3	2	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC..............................................................................................................................................................................................................................................	25	1	7.00	7	0	2	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAT...........................................................................................................	23	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	21	1	6.00	6	0	1	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGC.....................................................................................................................................................................................................................................................	18	1	6.00	6	0	0	3	2	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCC.................................................................................................................	18	1	6.00	6	0	4	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTT..................................................................................................................................................................................................................................................	21	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGC......................................................................................................................................................................	22	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	22	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	19	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	19	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGGCAGTGTAAA...................................................................................................................................................................	25	1	5.00	5	0	2	0	0	0	0	0	0	0	0	3
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTC.............................................................................................................	20	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTG............................................................................................................	22	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0

droEre2

ATCTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTTCCTTGTTAG------------------AATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAAGT-CTTGCAAATACACA--AATATTTGCAGGACGGGTCGTGTGTCAATGTATTGAT----CT-C-T-------------TAGCTATATTGCACACTTCCCGCCCTTTAAATG--------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	22	1	15392.00	15392	13430	1010	1	859	29	59	4
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTT.............................................................................................................	22	1	13097.00	13097	10804	2134	1	131	16	11	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	24	1	1960.00	1960	1886	49	0	8	1	0	16
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	21	1	1896.00	1896	1721	57	0	72	14	32	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	23	1	1587.00	1587	1386	126	0	34	0	6	35
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTT..............................................................................................................	21	1	1101.00	1101	945	117	0	25	9	5	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTT.............................................................................................................	21	1	901.00	901	873	27	0	1	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	21	1	604.00	604	600	4	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	25	1	419.00	419	413	2	0	2	0	0	2
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA...........................................................................................................	24	1	334.00	334	310	22	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTA............................................................................................................	23	1	325.00	325	279	38	0	8	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	23	1	303.00	303	234	12	0	3	6	9	39
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	25	1	197.00	197	195	2	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	20	1	192.00	192	161	3	0	2	5	6	15
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTC.............................................................................................................	22	1	150.00	150	5	145	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	23	1	103.00	103	102	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGT.................................................................................................................................................................................................................................................	22	1	98.00	98	66	1	2	3	15	11	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	20	1	82.00	82	81	0	0	0	1	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	26	1	81.00	81	80	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA................................................................................................................................................................................................................................................	22	1	76.00	76	74	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTT............................................................................................................	23	1	72.00	72	60	8	2	1	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCT...............................................................................................................	20	1	70.00	70	53	13	0	0	1	3	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTT..............................................................................................................	20	1	69.00	69	69	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTT.............................................................................................................	20	1	68.00	68	63	5	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCC....................................................................................................................................................................................................................................................	19	1	59.00	59	13	44	0	0	0	1	1
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	26	1	53.00	53	52	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGTA.....................................................................................................................................................................	23	1	50.00	50	40	0	0	0	5	0	5
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC................................................................................................................................................................................................................................................	23	1	32.00	32	27	4	0	1	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	20	1	27.00	27	26	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTG............................................................................................................	23	1	26.00	26	26	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA--------------------------------------------------------------------------------------------------------	27	1	26.00	26	26	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTA............................................................................................................	22	1	25.00	25	25	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA...........................................................................................................	23	1	25.00	25	25	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT...............................................................................................................................................................................................................................................	24	1	24.00	24	14	4	0	3	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTA.............................................................................................................	22	1	23.00	23	20	3	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTT..................................................................................................................................................................................................................................................	21	1	23.00	23	23	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA..........................................................................................................	24	1	22.00	22	22	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA..............................................................................................................................................................................................................................................	24	1	19.00	19	19	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGT......................................................................................................................................................................	22	1	17.00	17	11	1	1	0	3	1	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGC.................................................................................................................................................................................................................................................	22	1	17.00	17	7	3	0	7	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................ATATTGCACACTTCCCGCCCTTT.............................................................................................................	23	1	16.00	16	15	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT................................................................................................................................................................................................................................................	22	1	16.00	16	16	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG...............................................................................................................................................................................................................................................	24	1	15.00	15	14	0	0	0	1	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	22	1	14.00	14	9	1	0	4	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTC............................................................................................................	23	1	13.00	13	10	1	0	2	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG................................................................................................................................................................................................................................................	23	1	12.00	12	11	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATG.......................................................................................................................................................................	21	1	11.00	11	10	0	0	0	1	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	23	1	10.00	10	9	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC...............................................................................................................................................................................................................................................	24	1	9.00	9	9	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCACACTTCCCGCCCTTT.............................................................................................................	19	1	9.00	9	8	1	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGG.................................................................................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTT............................................................................................................	22	1	7.00	7	7	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTA..............................................................................................................	21	1	7.00	7	7	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCC................................................................................................................	19	1	7.00	7	4	3	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTG..............................................................................................................	21	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC..............................................................................................................................................................................................................................................	25	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGC.....................................................................................................................................................................................................................................................	18	1	7.00	7	2	2	0	0	1	2	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA.........................................................................................................	25	1	7.00	7	7	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT...............................................................................................................................................................................................................................................	24	1	6.00	6	5	0	0	0	0	1	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT................................................................................................................................................................................................................................................	23	1	6.00	6	3	0	0	0	0	3	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTA..................................................................................................................................................................................................................................................	21	1	6.00	6	6	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAAA.............................................................................................................................................................................................................................................	25	1	6.00	6	6	0	0	0	0	0	0
......................................................................................................................................................................................................................................ATATTGCACATTCACCGGCCTG..................................................................................................................................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0	0
........................................................................................................................................................................................................................................ATTGCACATTCACCGGCCT...................................................................................................................................................................................................................................................	19	1	5.00	5	5	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTC..............................................................................................................	21	1	5.00	5	0	5	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG...........................................................................................................	24	1	5.00	5	5	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTC.............................................................................................................	21	1	4.00	4	0	4	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTG.............................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTA.............................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAATGTA.....................................................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTG.............................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................AGGACGGGTCGTGTGTCAATGTATTGAT----............................................................................................................................................................	28	1	4.00	4	0	0	0	0	0	0	4
..........................................................................................................................................................................................................................................TGCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	19	1	4.00	4	4	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCC.................................................................................................................	18	1	4.00	4	4	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCC...................................................................................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAAG............................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCT...............................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTGCACATTCACCGGCCTGAAA...............................................................................................................................................................................................................................................	22	1	3.00	3	2	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................GGACGGGTCGTGTGTCAATGT......................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAC..........................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTTTAA...........................................................................................................	22	1	3.00	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT..............................................................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT...........................................................................................................	24	1	3.00	3	2	1	0	0	0	0	0
...........................................................................................................................................................................................................................................GCACATTCACCGGCCTGA.................................................................................................................................................................................................................................................	18	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................ATTGCACACTTCCCGCCCTTTG............................................................................................................	22	1	3.00	3	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG...........................................................................................................	24	1	3.00	3	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTGCACACTTCCCGCCCTT..............................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TATTGCACATTCACCGGCCTGATC...............................................................................................................................................................................................................................................	24	1	2.00	2	1	1	0	0	0	0	0

dgr_43

scaffold_15245:17564451-17564565 +

Known Ortholog

Canonical miRNA

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.7	-22.6	-22.5